Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:39:55 (2344533): wrapper (7.7.26015): starting
12:39:55 (2344533): wrapper: running run_atlas (--nthreads 8)
[2026-01-13 12:39:55] Arguments: --nthreads 8
[2026-01-13 12:39:55] Threads: 8
[2026-01-13 12:39:55] Checking for CVMFS
[2026-01-13 12:39:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 12:39:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 12:39:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 12:39:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 12:39:57] 2.13.3.0 11314 99482 213928 155097 3 274 30550345 32935937 31578 16776704 0 669727478 99.598 714372401 35422 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-13 12:39:57] CVMFS is ok
[2026-01-13 12:39:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 12:39:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 12:39:57] Further information can be found at the LHC@home message board.
[2026-01-13 12:39:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 12:39:57] Checking for apptainer binary...
[2026-01-13 12:39:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 12:39:57] Running /usr/bin/apptainer --version
[2026-01-13 12:39:57] apptainer version 1.4.5-2.el9
[2026-01-13 12:39:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 12:39:57] c7-2-10.aglt2.org
[2026-01-13 12:39:57] apptainer works
[2026-01-13 12:39:57] Set ATHENA_PROC_NUMBER=8
[2026-01-13 12:39:57] Set ATHENA_CORE_NUMBER=8
[2026-01-13 12:39:58] Starting ATLAS job with PandaID=6963076727
[2026-01-13 12:39:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 15:47:09]  *** The last 200 lines of the pilot log: ***
[2026-01-13 15:47:09] 2026-01-13 20:46:08,322 | INFO     | .. there are 36 such processes running
[2026-01-13 15:47:09] 2026-01-13 20:46:09,322 | INFO     | time since job start (11126s) is within the limit (174528.0s)
[2026-01-13 15:47:09] 2026-01-13 20:46:10,583 | INFO     | monitor loop #713: job 0:6963076727 is in state 'finished'
[2026-01-13 15:47:09] 2026-01-13 20:46:10,583 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 15:47:09] 2026-01-13 20:46:11,329 | INFO     | time since job start (11128s) is within the limit (174528.0s)
[2026-01-13 15:47:09] 2026-01-13 20:46:13,018 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 15:47:09] 2026-01-13 20:46:13,035 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3315.1161250000005
[2026-01-13 15:47:09] 2026-01-13 20:46:13,048 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963076727/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 15:47:09] 2026-01-13 20:46:13,050 | INFO     | extracted standard info from prmon json
[2026-01-13 15:47:09] 2026-01-13 20:46:13,050 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 15:47:09] 2026-01-13 20:46:13,050 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 15:47:09] 2026-01-13 20:46:13,076 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 15:47:09] 2026-01-13 20:46:13,077 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 15:47:09] 2026-01-13 20:46:13,079 | INFO     | fitting pss+swap vs Time
[2026-01-13 15:47:09] 2026-01-13 20:46:13,079 | INFO     | sum of square deviations: 1838694212.861876
[2026-01-13 15:47:09] 2026-01-13 20:46:13,098 | INFO     | sum of deviations: 12599985095.84531
[2026-01-13 15:47:09] 2026-01-13 20:46:13,099 | INFO     | mean x: 1768331615.0276244
[2026-01-13 15:47:09] 2026-01-13 20:46:13,099 | INFO     | mean y: 2559268.4309392264
[2026-01-13 15:47:09] 2026-01-13 20:46:13,099 | INFO     | intersect: -12115253382.526644
[2026-01-13 15:47:09] 2026-01-13 20:46:13,099 | INFO     | chi2: 3.237317257778413
[2026-01-13 15:47:09] 2026-01-13 20:46:13,099 | INFO     | sum of square deviations: 1690488307.8579507
[2026-01-13 15:47:09] 2026-01-13 20:46:13,100 | INFO     | sum of deviations: 12539483960.034096
[2026-01-13 15:47:09] 2026-01-13 20:46:13,100 | INFO     | mean x: 1768331462.528409
[2026-01-13 15:47:09] 2026-01-13 20:46:13,100 | INFO     | mean y: 2559206.1931818184
[2026-01-13 15:47:09] 2026-01-13 20:46:13,101 | INFO     | intersect: -13114339566.384346
[2026-01-13 15:47:09] 2026-01-13 20:46:13,101 | INFO     | chi2: 3.240958224964783
[2026-01-13 15:47:09] 2026-01-13 20:46:13,101 | INFO     | current chi2=3.240958224964783 (change=-0.11246865526144197 %)
[2026-01-13 15:47:09] 2026-01-13 20:46:13,101 | INFO     | right removable region: 175
[2026-01-13 15:47:09] 2026-01-13 20:46:13,101 | INFO     | sum of square deviations: 1690485257.8579507
[2026-01-13 15:47:09] 2026-01-13 20:46:13,102 | INFO     | sum of deviations: -35695231348.829544
[2026-01-13 15:47:09] 2026-01-13 20:46:13,102 | INFO     | mean x: 1768331767.528409
[2026-01-13 15:47:09] 2026-01-13 20:46:13,120 | INFO     | mean y: 2608711.965909091
[2026-01-13 15:47:09] 2026-01-13 20:46:13,121 | INFO     | intersect: 37341598360.05854
[2026-01-13 15:47:09] 2026-01-13 20:46:13,121 | INFO     | chi2: 0.3567351337219694
[2026-01-13 15:47:09] 2026-01-13 20:46:13,121 | INFO     | current chi2=0.3567351337219694 (change=88.98053217166684 %)
[2026-01-13 15:47:09] 2026-01-13 20:46:13,121 | INFO     | sum of square deviations: 1550462502.853803
[2026-01-13 15:47:09] 2026-01-13 20:46:13,122 | INFO     | sum of deviations: -39590812950.40937
[2026-01-13 15:47:09] 2026-01-13 20:46:13,122 | INFO     | mean x: 1768331920.0292397
[2026-01-13 15:47:09] 2026-01-13 20:46:13,122 | INFO     | mean y: 2612890.081871345
[2026-01-13 15:47:09] 2026-01-13 20:46:13,122 | INFO     | intersect: 45156686691.45085
[2026-01-13 15:47:09] 2026-01-13 20:46:13,123 | INFO     | chi2: 0.28990817164498545
[2026-01-13 15:47:09] 2026-01-13 20:46:13,123 | INFO     | current chi2=0.28990817164498545 (change=18.732935379745147 %)
[2026-01-13 15:47:09] 2026-01-13 20:46:13,123 | INFO     | left removable region: 20
[2026-01-13 15:47:09] 2026-01-13 20:46:13,123 | INFO     | sum of square deviations: 1154695722.8387098
[2026-01-13 15:47:09] 2026-01-13 20:46:13,124 | INFO     | sum of deviations: -21562897039.903236
[2026-01-13 15:47:09] 2026-01-13 20:46:13,124 | INFO     | mean x: 1768332042.032258
[2026-01-13 15:47:09] 2026-01-13 20:46:13,124 | INFO     | mean y: 2593661.7806451614
[2026-01-13 15:47:09] 2026-01-13 20:46:13,124 | INFO     | intersect: 33024593311.145885
[2026-01-13 15:47:09] 2026-01-13 20:46:13,114 | INFO     | monitor loop #714: job 0:6963076727 is in state 'finished'
[2026-01-13 15:47:09] 2026-01-13 20:46:13,142 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 15:47:09] 2026-01-13 20:46:13,146 | INFO     | chi2: 0.2187920428240771
[2026-01-13 15:47:09] 2026-01-13 20:46:13,146 | INFO     | current memory leak: -18.67 B/s (using 155 data points, chi2=0.22)
[2026-01-13 15:47:09] 2026-01-13 20:46:13,147 | INFO     | could have reported an average CPU frequency of 3350 MHz (10 samples)
[2026-01-13 15:47:09] 2026-01-13 20:46:13,147 | INFO     | ..............................
[2026-01-13 15:47:09] 2026-01-13 20:46:13,147 | INFO     | . Timing measurements:
[2026-01-13 15:47:09] 2026-01-13 20:46:13,147 | INFO     | . get job = 0 s
[2026-01-13 15:47:09] 2026-01-13 20:46:13,147 | INFO     | . initial setup = 5 s
[2026-01-13 15:47:09] 2026-01-13 20:46:13,147 | INFO     | . payload setup = 20 s
[2026-01-13 15:47:09] 2026-01-13 20:46:13,147 | INFO     | . stage-in = 0 s
[2026-01-13 15:47:09] 2026-01-13 20:46:13,147 | INFO     | . payload execution = 11041 s
[2026-01-13 15:47:09] 2026-01-13 20:46:13,147 | INFO     | . stage-out = 3 s
[2026-01-13 15:47:09] 2026-01-13 20:46:13,148 | INFO     | . log creation = 0 s
[2026-01-13 15:47:09] 2026-01-13 20:46:13,148 | INFO     | ..............................
[2026-01-13 15:47:09] 2026-01-13 20:46:13,401 | INFO     | time since job start (11130s) is within the limit (174528.0s)
[2026-01-13 15:47:09] 2026-01-13 20:46:13,601 | INFO     | 
[2026-01-13 15:47:09] 2026-01-13 20:46:13,601 | INFO     | job summary report
[2026-01-13 15:47:09] 2026-01-13 20:46:13,602 | INFO     | --------------------------------------------------
[2026-01-13 15:47:09] 2026-01-13 20:46:13,602 | INFO     | PanDA job id: 6963076727
[2026-01-13 15:47:09] 2026-01-13 20:46:13,602 | INFO     | task id: 47898826
[2026-01-13 15:47:09] 2026-01-13 20:46:13,602 | INFO     | errors: (none)
[2026-01-13 15:47:09] 2026-01-13 20:46:13,602 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 15:47:09] 2026-01-13 20:46:13,602 | INFO     | pilot state: finished 
[2026-01-13 15:47:09] 2026-01-13 20:46:13,602 | INFO     | transexitcode: 0
[2026-01-13 15:47:09] 2026-01-13 20:46:13,602 | INFO     | exeerrorcode: 0
[2026-01-13 15:47:09] 2026-01-13 20:46:13,602 | INFO     | exeerrordiag: 
[2026-01-13 15:47:09] 2026-01-13 20:46:13,602 | INFO     | exitcode: 0
[2026-01-13 15:47:09] 2026-01-13 20:46:13,602 | INFO     | exitmsg: OK
[2026-01-13 15:47:09] 2026-01-13 20:46:13,602 | INFO     | cpuconsumptiontime: 43578 s
[2026-01-13 15:47:09] 2026-01-13 20:46:13,602 | INFO     | nevents: 400
[2026-01-13 15:47:09] 2026-01-13 20:46:13,602 | INFO     | neventsw: 0
[2026-01-13 15:47:09] 2026-01-13 20:46:13,602 | INFO     | pid: 2359145
[2026-01-13 15:47:09] 2026-01-13 20:46:13,602 | INFO     | pgrp: 2359145
[2026-01-13 15:47:09] 2026-01-13 20:46:13,602 | INFO     | corecount: 8
[2026-01-13 15:47:09] 2026-01-13 20:46:13,602 | INFO     | event service: False
[2026-01-13 15:47:09] 2026-01-13 20:46:13,603 | INFO     | sizes: {0: 2283798, 1: 2283997, 12: 2283997, 13: 2284287, 23: 2284343, 11066: 2313581, 11067: 2313708, 11071: 2322762, 11073: 2322818, 11086: 2323012}
[2026-01-13 15:47:09] 2026-01-13 20:46:13,603 | INFO     | --------------------------------------------------
[2026-01-13 15:47:09] 2026-01-13 20:46:13,603 | INFO     | 
[2026-01-13 15:47:09] 2026-01-13 20:46:13,603 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-13 15:47:09] 2026-01-13 20:46:13,671 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 15:47:09] 2026-01-13 20:46:13,671 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 15:47:09] 2026-01-13 20:46:13,671 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 15:47:09] 2026-01-13 20:46:13,671 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 15:47:09] 2026-01-13 20:46:13,671 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 15:47:09] 2026-01-13 20:46:13,671 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 15:47:09] 2026-01-13 20:46:13,671 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 15:47:09] 2026-01-13 20:46:13,671 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 15:47:09] 2026-01-13 20:46:13,672 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 15:47:09] 2026-01-13 20:46:13,672 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 15:47:09] 2026-01-13 20:46:13,672 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 15:47:09] 2026-01-13 20:46:13,672 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 15:47:09] 2026-01-13 20:46:13,672 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 15:47:09] 2026-01-13 20:46:13,672 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 15:47:09] 2026-01-13 20:46:13,672 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 15:47:09] 2026-01-13 20:46:13,672 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 15:47:09] 2026-01-13 20:46:13,672 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 15:47:09] 2026-01-13 20:46:13,672 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 15:47:09] 2026-01-13 20:46:13,694 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 15:47:09] 2026-01-13 20:46:13,694 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 15:47:09] 2026-01-13 20:46:13,694 | INFO     | job 6963076727 has completed (purged errors)
[2026-01-13 15:47:09] 2026-01-13 20:46:13,694 | INFO     | overall cleanup function is called
[2026-01-13 15:47:09] 2026-01-13 20:46:14,703 | INFO     | --- collectZombieJob: --- 10, [2359145]
[2026-01-13 15:47:09] 2026-01-13 20:46:14,703 | INFO     | zombie collector waiting for pid 2359145
[2026-01-13 15:47:09] 2026-01-13 20:46:14,704 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 15:47:09] 2026-01-13 20:46:14,704 | INFO     | collected zombie processes
[2026-01-13 15:47:09] 2026-01-13 20:46:14,704 | INFO     | will attempt to kill all subprocesses of pid=2359145
[2026-01-13 15:47:09] 2026-01-13 20:46:16,333 | INFO     | process IDs to be killed: [2359145] (in reverse order)
[2026-01-13 15:47:09] 2026-01-13 20:46:16,507 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 15:47:09] 2026-01-13 20:46:16,507 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 15:47:09] 2026-01-13 20:46:16,523 | INFO     | did not find any defunct processes belonging to 2359145
[2026-01-13 15:47:09] 2026-01-13 20:46:16,538 | INFO     | did not find any defunct processes belonging to 2359145
[2026-01-13 15:47:09] 2026-01-13 20:46:16,538 | INFO     | ready for new job
[2026-01-13 15:47:09] 2026-01-13 20:46:16,539 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 15:47:09] 2026-01-13 20:46:16,545 | INFO     | ***************************************
[2026-01-13 15:47:09] 2026-01-13 20:46:16,546 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 15:47:09] 2026-01-13 20:46:16,546 | INFO     | ***************************************
[2026-01-13 15:47:09] 2026-01-13 20:46:16,546 | INFO     | 
[2026-01-13 15:47:09] 2026-01-13 20:46:16,550 | INFO     | architecture information:
[2026-01-13 15:47:09] 2026-01-13 20:46:16,550 | INFO     | executing command: cat /etc/os-release
[2026-01-13 15:47:09] 2026-01-13 20:46:16,566 | INFO     | cat /etc/os-release:
[2026-01-13 15:47:09] NAME="CentOS Linux"
[2026-01-13 15:47:09] VERSION="7 (Core)"
[2026-01-13 15:47:09] ID="centos"
[2026-01-13 15:47:09] ID_LIKE="rhel fedora"
[2026-01-13 15:47:09] VERSION_ID="7"
[2026-01-13 15:47:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 15:47:09] ANSI_COLOR="0;31"
[2026-01-13 15:47:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 15:47:09] HOME_URL="https://www.centos.org/"
[2026-01-13 15:47:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 15:47:09] 
[2026-01-13 15:47:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 15:47:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 15:47:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 15:47:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 15:47:09] 
[2026-01-13 15:47:09] 2026-01-13 20:46:16,567 | INFO     | ***************************************
[2026-01-13 15:47:09] 2026-01-13 20:46:17,078 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-13 15:47:09] 2026-01-13 20:46:17,129 | INFO     | sufficient remaining disk space (73107767296 B)
[2026-01-13 15:47:09] 2026-01-13 20:46:17,129 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 15:47:09] 2026-01-13 20:46:17,129 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 15:47:09] 2026-01-13 20:46:17,129 | INFO     | update_server=False
[2026-01-13 15:47:09] 2026-01-13 20:46:17,129 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 15:47:09] 2026-01-13 20:46:17,130 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 15:47:09] 2026-01-13 20:46:17,130 | INFO     | aborting loop
[2026-01-13 15:47:09] 2026-01-13 20:46:17,522 | INFO     | all data control threads have been joined
[2026-01-13 15:47:09] 2026-01-13 20:46:17,801 | INFO     | all payload control threads have been joined
[2026-01-13 15:47:09] 2026-01-13 20:46:18,135 | INFO     | [job] retrieve thread has finished
[2026-01-13 15:47:09] 2026-01-13 20:46:18,140 | INFO     | [job] job monitor thread has finished
[2026-01-13 15:47:09] 2026-01-13 20:46:18,343 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 15:47:09] 2026-01-13 20:46:18,510 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 15:47:09] 2026-01-13 20:46:18,528 | INFO     | [data] control thread has finished
[2026-01-13 15:47:09] 2026-01-13 20:46:18,532 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 15:47:09] 2026-01-13 20:46:18,533 | INFO     | [job] validate thread has finished
[2026-01-13 15:47:09] 2026-01-13 20:46:18,594 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 15:47:09] 2026-01-13 20:46:18,682 | INFO     | all job control threads have been joined
[2026-01-13 15:47:09] 2026-01-13 20:46:18,807 | INFO     | [payload] control thread has finished
[2026-01-13 15:47:09] 2026-01-13 20:46:19,033 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 15:47:09] 2026-01-13 20:46:19,258 | INFO     | [payload] validate_post thread has finished
[2026-01-13 15:47:09] 2026-01-13 20:46:19,374 | INFO     | [data] copytool_in thread has finished
[2026-01-13 15:47:09] 2026-01-13 20:46:19,516 | INFO     | [job] queue monitor thread has finished
[2026-01-13 15:47:09] 2026-01-13 20:46:19,619 | INFO     | [payload] failed_post thread has finished
[2026-01-13 15:47:09] 2026-01-13 20:46:19,688 | INFO     | [job] control thread has finished
[2026-01-13 15:47:09] 2026-01-13 20:46:19,904 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 15:47:09] 2026-01-13 20:46:20,350 | INFO     | [data] copytool_out thread has finished
[2026-01-13 15:47:09] 2026-01-13 20:46:23,917 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 15:47:09] 2026-01-13 20:46:28,107 | INFO     | job.realtimelogging is not enabled
[2026-01-13 15:47:09] 2026-01-13 20:46:29,113 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 15:47:09] 2026-01-13 20:46:47,087 | INFO     | PID=2350603 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 15:47:09] 2026-01-13 20:46:47,087 | INFO     | .. there are 36 such processes running
[2026-01-13 15:47:09] 2026-01-13 20:46:47,088 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 15:47:09] 2026-01-13 20:46:47,088 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 15:47:09] 2026-01-13 20:46:47,088 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 15:47:09] 2026-01-13 20:47:01,542 | INFO     | [monitor] cgroup control has ended
[2026-01-13 15:47:09] 2026-01-13 20:47:02,803 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140407625832256)>', '<ExcThread(monitor, started 140406733907712)>']
[2026-01-13 15:47:09] 2026-01-13 20:47:03,190 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 15:47:09] 2026-01-13 20:47:03,190 | INFO     | [monitor] control thread has ended
[2026-01-13 15:47:09] 2026-01-13 20:47:07,829 | INFO     | all workflow threads have been joined
[2026-01-13 15:47:09] 2026-01-13 20:47:07,829 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 15:47:09] 2026-01-13 20:47:07,830 | INFO     | traces error code: 0
[2026-01-13 15:47:09] 2026-01-13 20:47:07,830 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 15:47:09] 2026-01-13 20:47:08,770 [wrapper] ==== pilot stdout END ====
[2026-01-13 15:47:09] 2026-01-13 20:47:08,772 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 15:47:09] 2026-01-13 20:47:08,774 [wrapper] pilotpid: 2350603
[2026-01-13 15:47:09] 2026-01-13 20:47:08,776 [wrapper] Pilot exit status: 0
[2026-01-13 15:47:09] 2026-01-13 20:47:08,860 [wrapper] pandaids: 6963076727
[2026-01-13 15:47:09] 2026-01-13 20:47:09,030 [wrapper] cleanup supervisor_pilot 3385393 2350604
[2026-01-13 15:47:09] 2026-01-13 20:47:09,055 [wrapper] Test setup, not cleaning
[2026-01-13 15:47:09] 2026-01-13 20:47:09,077 [wrapper] apfmon messages muted
[2026-01-13 15:47:09] 2026-01-13 20:47:09,086 [wrapper] ==== wrapper stdout END ====
[2026-01-13 15:47:09] 2026-01-13 20:47:09,094 [wrapper] ==== wrapper stderr END ====
[2026-01-13 15:47:09]  *** Error codes and diagnostics ***
[2026-01-13 15:47:09]     "exeErrorCode": 0,
[2026-01-13 15:47:09]     "exeErrorDiag": "",
[2026-01-13 15:47:09]     "pilotErrorCode": 0,
[2026-01-13 15:47:09]     "pilotErrorDiag": "",
[2026-01-13 15:47:09]  *** Listing of results directory ***
[2026-01-13 15:47:09] total 443612
[2026-01-13 15:47:09] -rwx------. 1 boincer umatlas     36322 Jan  8 06:07 runpilot2-wrapper.sh
[2026-01-13 15:47:09] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 06:09 queuedata.json
[2026-01-13 15:47:09] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 06:09 pilot3.tar.gz
[2026-01-13 15:47:09] -rw-r--r--. 1 boincer umatlas       100 Jan 13 12:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 15:47:09] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 12:39 run_atlas
[2026-01-13 15:47:09] -rw-r--r--. 1 boincer umatlas       105 Jan 13 12:39 job.xml
[2026-01-13 15:47:09] -rw-r--r--. 2 boincer umatlas 224557382 Jan 13 12:39 EVNT.47898824._000956.pool.root.1
[2026-01-13 15:47:09] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 12:39 start_atlas.sh
[2026-01-13 15:47:09] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 12:39 shared
[2026-01-13 15:47:09] -rw-r--r--. 2 boincer umatlas    592402 Jan 13 12:39 input.tar.gz
[2026-01-13 15:47:09] -rw-r--r--. 1 boincer umatlas         0 Jan 13 12:39 boinc_lockfile
[2026-01-13 15:47:09] -rw-r--r--. 1 boincer umatlas      2519 Jan 13 12:39 pandaJob.out
[2026-01-13 15:47:09] -rw-------. 1 boincer umatlas        57 Jan 13 12:39 setup.sh.local
[2026-01-13 15:47:09] -rw-------. 1 boincer umatlas    997226 Jan 13 12:40 agis_schedconf.cvmfs.json
[2026-01-13 15:47:09] drwx------. 5 boincer umatlas      4096 Jan 13 12:40 pilot3
[2026-01-13 15:47:09] -rw-r--r--. 1 boincer umatlas      6944 Jan 13 15:39 init_data.xml
[2026-01-13 15:47:09] -rw-------. 1 boincer umatlas 221999264 Jan 13 15:45 HITS.47898826._024023.pool.root.1
[2026-01-13 15:47:09] -rw-r--r--. 1 boincer umatlas       531 Jan 13 15:45 boinc_task_state.xml
[2026-01-13 15:47:09] -rw-------. 1 boincer umatlas      1047 Jan 13 15:45 memory_monitor_summary.json
[2026-01-13 15:47:09] -rw-------. 1 boincer umatlas   1516246 Jan 13 15:45 agis_ddmendpoints.agis.ALL.json
[2026-01-13 15:47:09] -rw-------. 1 boincer umatlas    426548 Jan 13 15:45 log.47898826._024023.job.log.tgz.1
[2026-01-13 15:47:09] -rw-------. 1 boincer umatlas      7774 Jan 13 15:46 heartbeat.json
[2026-01-13 15:47:09] -rw-------. 1 boincer umatlas        95 Jan 13 15:46 pilot_heartbeat.json
[2026-01-13 15:47:09] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 15:47 boinc_mmap_file
[2026-01-13 15:47:09] -rw-r--r--. 1 boincer umatlas        28 Jan 13 15:47 wrapper_checkpoint.txt
[2026-01-13 15:47:09] -rw-------. 1 boincer umatlas      4896 Jan 13 15:47 pilotlog.txt
[2026-01-13 15:47:09] -rw-------. 1 boincer umatlas   1459891 Jan 13 15:47 log.47898826._024023.job.log.1
[2026-01-13 15:47:09] -rw-------. 1 boincer umatlas       357 Jan 13 15:47 output.list
[2026-01-13 15:47:09] -rw-r--r--. 1 boincer umatlas       620 Jan 13 15:47 runtime_log
[2026-01-13 15:47:09] -rw-------. 1 boincer umatlas   1904640 Jan 13 15:47 result.tar.gz
[2026-01-13 15:47:09] -rw-r--r--. 1 boincer umatlas      9338 Jan 13 15:47 runtime_log.err
[2026-01-13 15:47:09] -rw-------. 1 boincer umatlas       656 Jan 13 15:47 6GvKDmn22x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmt3eKDm3MD29n.diag
[2026-01-13 15:47:09] -rw-r--r--. 1 boincer umatlas     21385 Jan 13 15:47 stderr.txt
[2026-01-13 15:47:09] HITS file was successfully produced:
[2026-01-13 15:47:09] -rw-------. 1 boincer umatlas 221999264 Jan 13 15:45 shared/HITS.pool.root.1
[2026-01-13 15:47:09]  *** Contents of shared directory: ***
[2026-01-13 15:47:09] total 438560
[2026-01-13 15:47:09] -rw-r--r--. 2 boincer umatlas 224557382 Jan 13 12:39 ATLAS.root_0
[2026-01-13 15:47:09] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 12:39 start_atlas.sh
[2026-01-13 15:47:09] -rw-r--r--. 2 boincer umatlas    592402 Jan 13 12:39 input.tar.gz
[2026-01-13 15:47:09] -rw-------. 1 boincer umatlas 221999264 Jan 13 15:45 HITS.pool.root.1
[2026-01-13 15:47:09] -rw-------. 1 boincer umatlas   1904640 Jan 13 15:47 result.tar.gz
15:47:11 (2344533): run_atlas exited; CPU time 43998.525009
15:47:11 (2344533): called boinc_finish(0)

</stderr_txt>
]]>

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