Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:04:34 (21457): wrapper (7.7.26015): starting
08:04:34 (21457): wrapper: running run_atlas (--nthreads 8)
[2026-01-13 08:04:34] Arguments: --nthreads 8
[2026-01-13 08:04:34] Threads: 8
[2026-01-13 08:04:34] Checking for CVMFS
[2026-01-13 08:04:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 08:04:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 08:04:34] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 08:04:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 08:04:35] 2.11.2.0 2878 126653 84404 155089 0 1 20204447 20275201 1 130560 0 27810009 99.795 7901379 32834 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-13 08:04:35] CVMFS is ok
[2026-01-13 08:04:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 08:04:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 08:04:35] Further information can be found at the LHC@home message board.
[2026-01-13 08:04:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 08:04:35] Checking for apptainer binary...
[2026-01-13 08:04:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 08:04:35] Running /usr/bin/apptainer --version
[2026-01-13 08:04:35] apptainer version 1.3.2-1.el7
[2026-01-13 08:04:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 08:04:37] c-204-27.aglt2.org
[2026-01-13 08:04:37] apptainer works
[2026-01-13 08:04:37] Set ATHENA_PROC_NUMBER=8
[2026-01-13 08:04:37] Set ATHENA_CORE_NUMBER=8
[2026-01-13 08:04:37] Starting ATLAS job with PandaID=6968661698
[2026-01-13 08:04:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 11:12:21]  *** The last 200 lines of the pilot log: ***
[2026-01-13 11:12:21] 2026-01-13 16:11:32,826 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 11:12:21] 2026-01-13 16:11:32,826 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 11:12:21] 2026-01-13 16:11:32,826 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 11:12:21] 2026-01-13 16:11:32,830 | INFO     | fitting pss+swap vs Time
[2026-01-13 11:12:21] 2026-01-13 16:11:32,831 | INFO     | sum of square deviations: 1900284932.0
[2026-01-13 11:12:21] 2026-01-13 16:11:32,832 | INFO     | sum of deviations: 31475679688.999996
[2026-01-13 11:12:21] 2026-01-13 16:11:32,832 | INFO     | mean x: 1768315080.0
[2026-01-13 11:12:21] 2026-01-13 16:11:32,832 | INFO     | mean y: 2560823.732240437
[2026-01-13 11:12:21] 2026-01-13 16:11:32,832 | INFO     | intersect: -29287214677.844177
[2026-01-13 11:12:21] 2026-01-13 16:11:32,833 | INFO     | chi2: 1.451798974929481
[2026-01-13 11:12:21] 2026-01-13 16:11:32,833 | INFO     | sum of square deviations: 1748737904.5
[2026-01-13 11:12:21] 2026-01-13 16:11:32,834 | INFO     | sum of deviations: 30434535806.5
[2026-01-13 11:12:21] 2026-01-13 16:11:32,834 | INFO     | mean x: 1768314927.5
[2026-01-13 11:12:21] 2026-01-13 16:11:32,835 | INFO     | mean y: 2559775.7921348317
[2026-01-13 11:12:21] 2026-01-13 16:11:32,835 | INFO     | intersect: -30772688956.266907
[2026-01-13 11:12:21] 2026-01-13 16:11:32,835 | INFO     | chi2: 1.4525667987720652
[2026-01-13 11:12:21] 2026-01-13 16:11:32,835 | INFO     | current chi2=1.4525667987720652 (change=-0.0528877520816138 %)
[2026-01-13 11:12:21] 2026-01-13 16:11:32,835 | INFO     | right removable region: 177
[2026-01-13 11:12:21] 2026-01-13 16:11:32,836 | INFO     | sum of square deviations: 1748737904.5
[2026-01-13 11:12:21] 2026-01-13 16:11:32,837 | INFO     | sum of deviations: 2864133274.500001
[2026-01-13 11:12:21] 2026-01-13 16:11:32,837 | INFO     | mean x: 1768315232.5
[2026-01-13 11:12:21] 2026-01-13 16:11:32,837 | INFO     | mean y: 2589257.1516853934
[2026-01-13 11:12:21] 2026-01-13 16:11:32,837 | INFO     | intersect: -2893608328.6475167
[2026-01-13 11:12:21] 2026-01-13 16:11:32,837 | INFO     | chi2: 0.02220026856703586
[2026-01-13 11:12:21] 2026-01-13 16:11:32,838 | INFO     | current chi2=0.02220026856703586 (change=98.47084417674876 %)
[2026-01-13 11:12:21] 2026-01-13 16:11:32,838 | INFO     | sum of square deviations: 1605470102.0
[2026-01-13 11:12:21] 2026-01-13 16:11:32,839 | INFO     | sum of deviations: -725640383.9999996
[2026-01-13 11:12:21] 2026-01-13 16:11:32,839 | INFO     | mean x: 1768315385.0
[2026-01-13 11:12:21] 2026-01-13 16:11:32,839 | INFO     | mean y: 2593070.710982659
[2026-01-13 11:12:21] 2026-01-13 16:11:32,839 | INFO     | intersect: 801836266.4615737
[2026-01-13 11:12:21] 2026-01-13 16:11:32,840 | INFO     | chi2: 0.00902928837386001
[2026-01-13 11:12:21] 2026-01-13 16:11:32,840 | INFO     | current chi2=0.00902928837386001 (change=59.3280218813786 %)
[2026-01-13 11:12:21] 2026-01-13 16:11:32,840 | INFO     | sum of square deviations: 1470248962.0
[2026-01-13 11:12:21] 2026-01-13 16:11:32,841 | INFO     | sum of deviations: -2122311176.5000002
[2026-01-13 11:12:21] 2026-01-13 16:11:32,841 | INFO     | mean x: 1768315537.5
[2026-01-13 11:12:21] 2026-01-13 16:11:32,841 | INFO     | mean y: 2594639.101190476
[2026-01-13 11:12:21] 2026-01-13 16:11:32,841 | INFO     | intersect: 2555166295.8835306
[2026-01-13 11:12:21] 2026-01-13 16:11:32,842 | INFO     | chi2: 0.006301767094431806
[2026-01-13 11:12:21] 2026-01-13 16:11:32,842 | INFO     | current chi2=0.006301767094431806 (change=30.207488857310604 %)
[2026-01-13 11:12:21] 2026-01-13 16:11:32,842 | INFO     | sum of square deviations: 1342841922.0
[2026-01-13 11:12:21] 2026-01-13 16:11:32,843 | INFO     | sum of deviations: -2855971017.000001
[2026-01-13 11:12:21] 2026-01-13 16:11:32,843 | INFO     | mean x: 1768315690.0
[2026-01-13 11:12:21] 2026-01-13 16:11:32,843 | INFO     | mean y: 2595514.1656441716
[2026-01-13 11:12:21] 2026-01-13 16:11:32,843 | INFO     | intersect: 3763468835.743669
[2026-01-13 11:12:21] 2026-01-13 16:11:32,844 | INFO     | chi2: 0.005196927224767652
[2026-01-13 11:12:21] 2026-01-13 16:11:32,844 | INFO     | current chi2=0.005196927224767652 (change=17.53222315436542 %)
[2026-01-13 11:12:21] 2026-01-13 16:11:32,844 | INFO     | left removable region: 40
[2026-01-13 11:12:21] 2026-01-13 16:11:32,844 | INFO     | sum of square deviations: 797291228.0
[2026-01-13 11:12:21] 2026-01-13 16:11:32,845 | INFO     | sum of deviations: -2163977928.0
[2026-01-13 11:12:21] 2026-01-13 16:11:32,845 | INFO     | mean x: 1768316117.0
[2026-01-13 11:12:21] 2026-01-13 16:11:32,845 | INFO     | mean y: 2594143.569343066
[2026-01-13 11:12:21] 2026-01-13 16:11:32,845 | INFO     | intersect: 4802091381.879189
[2026-01-13 11:12:21] 2026-01-13 16:11:32,845 | INFO     | chi2: 0.004651407013784651
[2026-01-13 11:12:21] 2026-01-13 16:11:32,846 | INFO     | current memory leak: -2.71 B/s (using 137 data points, chi2=0.00)
[2026-01-13 11:12:21] 2026-01-13 16:11:32,846 | INFO     | could have reported an average CPU frequency of 1985 MHz (10 samples)
[2026-01-13 11:12:21] 2026-01-13 16:11:32,846 | INFO     | ..............................
[2026-01-13 11:12:21] 2026-01-13 16:11:32,846 | INFO     | . Timing measurements:
[2026-01-13 11:12:21] 2026-01-13 16:11:32,846 | INFO     | . get job = 0 s
[2026-01-13 11:12:21] 2026-01-13 16:11:32,846 | INFO     | . initial setup = 2 s
[2026-01-13 11:12:21] 2026-01-13 16:11:32,847 | INFO     | . payload setup = 8 s
[2026-01-13 11:12:21] 2026-01-13 16:11:32,847 | INFO     | . stage-in = 0 s
[2026-01-13 11:12:21] 2026-01-13 16:11:32,847 | INFO     | . payload execution = 11156 s
[2026-01-13 11:12:21] 2026-01-13 16:11:32,847 | INFO     | . stage-out = 2 s
[2026-01-13 11:12:21] 2026-01-13 16:11:32,847 | INFO     | . log creation = 0 s
[2026-01-13 11:12:21] 2026-01-13 16:11:32,847 | INFO     | ..............................
[2026-01-13 11:12:21] 2026-01-13 16:11:32,937 | INFO     | 
[2026-01-13 11:12:21] 2026-01-13 16:11:32,938 | INFO     | job summary report
[2026-01-13 11:12:21] 2026-01-13 16:11:32,938 | INFO     | --------------------------------------------------
[2026-01-13 11:12:21] 2026-01-13 16:11:32,938 | INFO     | PanDA job id: 6968661698
[2026-01-13 11:12:21] 2026-01-13 16:11:32,938 | INFO     | task id: 48188528
[2026-01-13 11:12:21] 2026-01-13 16:11:32,939 | INFO     | errors: (none)
[2026-01-13 11:12:21] 2026-01-13 16:11:32,939 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 11:12:21] 2026-01-13 16:11:32,939 | INFO     | pilot state: finished 
[2026-01-13 11:12:21] 2026-01-13 16:11:32,939 | INFO     | transexitcode: 0
[2026-01-13 11:12:21] 2026-01-13 16:11:32,939 | INFO     | exeerrorcode: 0
[2026-01-13 11:12:21] 2026-01-13 16:11:32,939 | INFO     | exeerrordiag: 
[2026-01-13 11:12:21] 2026-01-13 16:11:32,940 | INFO     | exitcode: 0
[2026-01-13 11:12:21] 2026-01-13 16:11:32,940 | INFO     | exitmsg: OK
[2026-01-13 11:12:21] 2026-01-13 16:11:32,940 | INFO     | cpuconsumptiontime: 83124 s
[2026-01-13 11:12:21] 2026-01-13 16:11:32,940 | INFO     | nevents: 400
[2026-01-13 11:12:21] 2026-01-13 16:11:32,940 | INFO     | neventsw: 0
[2026-01-13 11:12:21] 2026-01-13 16:11:32,940 | INFO     | pid: 663
[2026-01-13 11:12:21] 2026-01-13 16:11:32,941 | INFO     | pgrp: 663
[2026-01-13 11:12:21] 2026-01-13 16:11:32,941 | INFO     | corecount: 8
[2026-01-13 11:12:21] 2026-01-13 16:11:32,941 | INFO     | event service: False
[2026-01-13 11:12:21] 2026-01-13 16:11:32,941 | INFO     | sizes: {0: 2284138, 6: 2284400, 11: 2284428, 11168: 2313646, 11171: 2322700, 11178: 2322838}
[2026-01-13 11:12:21] 2026-01-13 16:11:32,941 | INFO     | --------------------------------------------------
[2026-01-13 11:12:21] 2026-01-13 16:11:32,941 | INFO     | 
[2026-01-13 11:12:21] 2026-01-13 16:11:32,942 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-13 11:12:21] 2026-01-13 16:11:32,971 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 11:12:21] 2026-01-13 16:11:32,971 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 11:12:21] 2026-01-13 16:11:32,972 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 11:12:21] 2026-01-13 16:11:32,972 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 11:12:21] 2026-01-13 16:11:32,972 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 11:12:21] 2026-01-13 16:11:32,972 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 11:12:21] 2026-01-13 16:11:32,972 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 11:12:21] 2026-01-13 16:11:32,972 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 11:12:21] 2026-01-13 16:11:32,973 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 11:12:21] 2026-01-13 16:11:32,973 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 11:12:21] 2026-01-13 16:11:32,973 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 11:12:21] 2026-01-13 16:11:32,973 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 11:12:21] 2026-01-13 16:11:32,974 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 11:12:21] 2026-01-13 16:11:32,974 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 11:12:21] 2026-01-13 16:11:32,974 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 11:12:21] 2026-01-13 16:11:32,974 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 11:12:21] 2026-01-13 16:11:32,974 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 11:12:21] 2026-01-13 16:11:32,974 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 11:12:21] 2026-01-13 16:11:32,975 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 11:12:21] 2026-01-13 16:11:32,975 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 11:12:21] 2026-01-13 16:11:32,975 | INFO     | job 6968661698 has completed (purged errors)
[2026-01-13 11:12:21] 2026-01-13 16:11:32,975 | INFO     | overall cleanup function is called
[2026-01-13 11:12:21] 2026-01-13 16:11:33,983 | INFO     | --- collectZombieJob: --- 10, [663]
[2026-01-13 11:12:21] 2026-01-13 16:11:33,983 | INFO     | zombie collector waiting for pid 663
[2026-01-13 11:12:21] 2026-01-13 16:11:33,984 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 11:12:21] 2026-01-13 16:11:33,984 | INFO     | collected zombie processes
[2026-01-13 11:12:21] 2026-01-13 16:11:33,984 | INFO     | will attempt to kill all subprocesses of pid=663
[2026-01-13 11:12:21] 2026-01-13 16:11:34,074 | INFO     | process IDs to be killed: [663] (in reverse order)
[2026-01-13 11:12:21] 2026-01-13 16:11:34,132 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 11:12:21] 2026-01-13 16:11:34,133 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 11:12:21] 2026-01-13 16:11:34,137 | INFO     | did not find any defunct processes belonging to 663
[2026-01-13 11:12:21] 2026-01-13 16:11:34,141 | INFO     | did not find any defunct processes belonging to 663
[2026-01-13 11:12:21] 2026-01-13 16:11:34,141 | INFO     | ready for new job
[2026-01-13 11:12:21] 2026-01-13 16:11:34,141 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 11:12:21] 2026-01-13 16:11:34,144 | INFO     | ***************************************
[2026-01-13 11:12:21] 2026-01-13 16:11:34,144 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 11:12:21] 2026-01-13 16:11:34,144 | INFO     | ***************************************
[2026-01-13 11:12:21] 2026-01-13 16:11:34,144 | INFO     | 
[2026-01-13 11:12:21] 2026-01-13 16:11:34,145 | INFO     | architecture information:
[2026-01-13 11:12:21] 2026-01-13 16:11:34,145 | INFO     | executing command: cat /etc/os-release
[2026-01-13 11:12:21] 2026-01-13 16:11:34,162 | INFO     | cat /etc/os-release:
[2026-01-13 11:12:21] NAME="CentOS Linux"
[2026-01-13 11:12:21] VERSION="7 (Core)"
[2026-01-13 11:12:21] ID="centos"
[2026-01-13 11:12:21] ID_LIKE="rhel fedora"
[2026-01-13 11:12:21] VERSION_ID="7"
[2026-01-13 11:12:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 11:12:21] ANSI_COLOR="0;31"
[2026-01-13 11:12:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 11:12:21] HOME_URL="https://www.centos.org/"
[2026-01-13 11:12:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 11:12:21] 
[2026-01-13 11:12:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 11:12:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 11:12:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 11:12:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 11:12:21] 
[2026-01-13 11:12:21] 2026-01-13 16:11:34,162 | INFO     | ***************************************
[2026-01-13 11:12:21] 2026-01-13 16:11:34,665 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-13 11:12:21] 2026-01-13 16:11:34,684 | INFO     | sufficient remaining disk space (18243125248 B)
[2026-01-13 11:12:21] 2026-01-13 16:11:34,685 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 11:12:21] 2026-01-13 16:11:34,685 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 11:12:21] 2026-01-13 16:11:34,685 | INFO     | update_server=False
[2026-01-13 11:12:21] 2026-01-13 16:11:34,685 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 11:12:21] 2026-01-13 16:11:34,686 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-13 11:12:21] 2026-01-13 16:11:34,686 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 11:12:21] 2026-01-13 16:11:34,687 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 11:12:21] 2026-01-13 16:11:34,687 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 11:12:21] 2026-01-13 16:11:34,687 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 11:12:21] 2026-01-13 16:11:34,688 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 11:12:21] 2026-01-13 16:11:34,688 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 11:12:21] 2026-01-13 16:11:34,688 | INFO     | aborting loop
[2026-01-13 11:12:21] 2026-01-13 16:11:35,284 | INFO     | all payload control threads have been joined
[2026-01-13 11:12:21] 2026-01-13 16:11:35,504 | INFO     | all data control threads have been joined
[2026-01-13 11:12:21] 2026-01-13 16:11:35,690 | INFO     | [job] retrieve thread has finished
[2026-01-13 11:12:21] 2026-01-13 16:11:35,694 | INFO     | [job] queue monitor thread has finished
[2026-01-13 11:12:21] 2026-01-13 16:11:35,695 | INFO     | [job] job monitor thread has finished
[2026-01-13 11:12:21] 2026-01-13 16:11:35,819 | INFO     | [data] copytool_in thread has finished
[2026-01-13 11:12:21] 2026-01-13 16:11:35,833 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 11:12:21] 2026-01-13 16:11:35,933 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 11:12:21] 2026-01-13 16:11:36,180 | INFO     | all job control threads have been joined
[2026-01-13 11:12:21] 2026-01-13 16:11:36,240 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 11:12:21] 2026-01-13 16:11:36,290 | INFO     | [payload] control thread has finished
[2026-01-13 11:12:21] 2026-01-13 16:11:36,510 | INFO     | [data] control thread has finished
[2026-01-13 11:12:21] 2026-01-13 16:11:36,545 | INFO     | [payload] failed_post thread has finished
[2026-01-13 11:12:21] 2026-01-13 16:11:36,694 | INFO     | [data] copytool_out thread has finished
[2026-01-13 11:12:21] 2026-01-13 16:11:36,734 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 11:12:21] 2026-01-13 16:11:36,932 | INFO     | [job] validate thread has finished
[2026-01-13 11:12:21] 2026-01-13 16:11:37,140 | INFO     | [payload] validate_post thread has finished
[2026-01-13 11:12:21] 2026-01-13 16:11:37,185 | INFO     | [job] control thread has finished
[2026-01-13 11:12:21] 2026-01-13 16:11:40,740 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 11:12:21] 2026-01-13 16:11:44,827 | INFO     | job.realtimelogging is not enabled
[2026-01-13 11:12:21] 2026-01-13 16:11:45,832 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 11:12:21] 2026-01-13 16:12:14,982 | INFO     | [monitor] cgroup control has ended
[2026-01-13 11:12:21] 2026-01-13 16:12:16,048 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140449629075264)>', '<ExcThread(monitor, started 140448903452416)>']
[2026-01-13 11:12:21] 2026-01-13 16:12:16,878 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 11:12:21] 2026-01-13 16:12:16,879 | INFO     | [monitor] control thread has ended
[2026-01-13 11:12:21] 2026-01-13 16:12:21,074 | INFO     | all workflow threads have been joined
[2026-01-13 11:12:21] 2026-01-13 16:12:21,074 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 11:12:21] 2026-01-13 16:12:21,075 | INFO     | traces error code: 0
[2026-01-13 11:12:21] 2026-01-13 16:12:21,075 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 11:12:21] 2026-01-13 16:12:21,192 [wrapper] ==== pilot stdout END ====
[2026-01-13 11:12:21] 2026-01-13 16:12:21,196 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 11:12:21] 2026-01-13 16:12:21,201 [wrapper] pilotpid: 25511
[2026-01-13 11:12:21] 2026-01-13 16:12:21,205 [wrapper] Pilot exit status: 0
[2026-01-13 11:12:21] 2026-01-13 16:12:21,224 [wrapper] pandaids: 6968661698
[2026-01-13 11:12:21] 2026-01-13 16:12:21,271 [wrapper] cleanup supervisor_pilot 14939 25512
[2026-01-13 11:12:21] 2026-01-13 16:12:21,276 [wrapper] Test setup, not cleaning
[2026-01-13 11:12:21] 2026-01-13 16:12:21,280 [wrapper] apfmon messages muted
[2026-01-13 11:12:21] 2026-01-13 16:12:21,285 [wrapper] ==== wrapper stdout END ====
[2026-01-13 11:12:21] 2026-01-13 16:12:21,289 [wrapper] ==== wrapper stderr END ====
[2026-01-13 11:12:21]  *** Error codes and diagnostics ***
[2026-01-13 11:12:21]     "exeErrorCode": 0,
[2026-01-13 11:12:21]     "exeErrorDiag": "",
[2026-01-13 11:12:21]     "pilotErrorCode": 0,
[2026-01-13 11:12:21]     "pilotErrorDiag": "",
[2026-01-13 11:12:21]  *** Listing of results directory ***
[2026-01-13 11:12:21] total 600516
[2026-01-13 11:12:21] -rw-r--r-- 1 boincer umatlas    579449 Jan 13 06:09 pilot3.tar.gz
[2026-01-13 11:12:21] -rwx------ 1 boincer umatlas     36322 Jan 13 07:02 runpilot2-wrapper.sh
[2026-01-13 11:12:21] -rw-r--r-- 1 boincer umatlas      5112 Jan 13 07:02 queuedata.json
[2026-01-13 11:12:21] -rw-r--r-- 1 boincer umatlas       100 Jan 13 08:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 11:12:21] -rwxr-xr-x 1 boincer umatlas      7986 Jan 13 08:04 run_atlas
[2026-01-13 11:12:21] -rw-r--r-- 1 boincer umatlas       105 Jan 13 08:04 job.xml
[2026-01-13 11:12:21] -rw-r--r-- 2 boincer umatlas 317512348 Jan 13 08:04 EVNT.48188524._000009.pool.root.1
[2026-01-13 11:12:21] -rw-r--r-- 2 boincer umatlas     15847 Jan 13 08:04 start_atlas.sh
[2026-01-13 11:12:21] drwxrwx--x 2 boincer umatlas      4096 Jan 13 08:04 shared
[2026-01-13 11:12:21] -rw-r--r-- 2 boincer umatlas    592417 Jan 13 08:04 input.tar.gz
[2026-01-13 11:12:21] -rw-r--r-- 1 boincer umatlas         0 Jan 13 08:04 boinc_lockfile
[2026-01-13 11:12:21] -rw-r--r-- 1 boincer umatlas      2642 Jan 13 08:04 pandaJob.out
[2026-01-13 11:12:21] -rw------- 1 boincer umatlas        57 Jan 13 08:04 setup.sh.local
[2026-01-13 11:12:21] -rw------- 1 boincer umatlas    992669 Jan 13 08:04 agis_schedconf.cvmfs.json
[2026-01-13 11:12:21] drwx------ 5 boincer umatlas      4096 Jan 13 08:04 pilot3
[2026-01-13 11:12:21] -rw-r--r-- 1 boincer umatlas      5911 Jan 13 11:09 init_data.xml
[2026-01-13 11:12:21] -rw------- 1 boincer umatlas        95 Jan 13 11:10 pilot_heartbeat.json
[2026-01-13 11:12:21] -rw------- 1 boincer umatlas 289461835 Jan 13 11:10 HITS.48188528._000209.pool.root.1
[2026-01-13 11:12:21] -rw-r--r-- 1 boincer umatlas       530 Jan 13 11:10 boinc_task_state.xml
[2026-01-13 11:12:21] -rw------- 1 boincer umatlas      1050 Jan 13 11:11 memory_monitor_summary.json
[2026-01-13 11:12:21] -rw------- 1 boincer umatlas   1516246 Jan 13 11:11 agis_ddmendpoints.agis.ALL.json
[2026-01-13 11:12:21] -rw------- 1 boincer umatlas    462548 Jan 13 11:11 log.48188528._000209.job.log.tgz.1
[2026-01-13 11:12:21] -rw------- 1 boincer umatlas      7842 Jan 13 11:11 heartbeat.json
[2026-01-13 11:12:21] -rw-r--r-- 1 boincer umatlas      8192 Jan 13 11:11 boinc_mmap_file
[2026-01-13 11:12:21] -rw-r--r-- 1 boincer umatlas        28 Jan 13 11:11 wrapper_checkpoint.txt
[2026-01-13 11:12:21] -rw------- 1 boincer umatlas      4624 Jan 13 11:12 pilotlog.txt
[2026-01-13 11:12:21] -rw------- 1 boincer umatlas   1553297 Jan 13 11:12 log.48188528._000209.job.log.1
[2026-01-13 11:12:21] -rw------- 1 boincer umatlas       357 Jan 13 11:12 output.list
[2026-01-13 11:12:21] -rw-r--r-- 1 boincer umatlas       620 Jan 13 11:12 runtime_log
[2026-01-13 11:12:21] -rw------- 1 boincer umatlas   2037760 Jan 13 11:12 result.tar.gz
[2026-01-13 11:12:21] -rw------- 1 boincer umatlas       663 Jan 13 11:12 WP5MDmYHsz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOznKDm0gn0xm.diag
[2026-01-13 11:12:21] -rw-r--r-- 1 boincer umatlas      9343 Jan 13 11:12 runtime_log.err
[2026-01-13 11:12:21] -rw-r--r-- 1 boincer umatlas     20769 Jan 13 11:12 stderr.txt
[2026-01-13 11:12:21] HITS file was successfully produced:
[2026-01-13 11:12:21] -rw------- 1 boincer umatlas 289461835 Jan 13 11:10 shared/HITS.pool.root.1
[2026-01-13 11:12:21]  *** Contents of shared directory: ***
[2026-01-13 11:12:21] total 595344
[2026-01-13 11:12:21] -rw-r--r-- 2 boincer umatlas 317512348 Jan 13 08:04 ATLAS.root_0
[2026-01-13 11:12:21] -rw-r--r-- 2 boincer umatlas     15847 Jan 13 08:04 start_atlas.sh
[2026-01-13 11:12:21] -rw-r--r-- 2 boincer umatlas    592417 Jan 13 08:04 input.tar.gz
[2026-01-13 11:12:21] -rw------- 1 boincer umatlas 289461835 Jan 13 11:10 HITS.pool.root.1
[2026-01-13 11:12:21] -rw------- 1 boincer umatlas   2037760 Jan 13 11:12 result.tar.gz
11:12:23 (21457): run_atlas exited; CPU time 83054.059596
11:12:23 (21457): called boinc_finish(0)

</stderr_txt>
]]>

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