Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:04:16 (2636693): wrapper (7.7.26015): starting
22:04:16 (2636693): wrapper: running run_atlas (--nthreads 4)
[2026-01-13 22:04:16] Arguments: --nthreads 4
[2026-01-13 22:04:16] Threads: 4
[2026-01-13 22:04:16] Checking for CVMFS
[2026-01-13 22:04:16] No cvmfs_config command found, will try listing directly
[2026-01-13 22:04:16] CVMFS is ok
[2026-01-13 22:04:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 22:04:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 22:04:16] Further information can be found at the LHC@home message board.
[2026-01-13 22:04:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 22:04:16] Checking for apptainer binary...
[2026-01-13 22:04:16] which: no apptainer in ((null))
[2026-01-13 22:04:16] apptainer is not installed, using version from CVMFS
[2026-01-13 22:04:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 22:04:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-01-13 22:04:16] apptainer works
[2026-01-13 22:04:16] Set ATHENA_PROC_NUMBER=4
[2026-01-13 22:04:16] Set ATHENA_CORE_NUMBER=4
[2026-01-13 22:04:16] Starting ATLAS job with PandaID=6968661712
[2026-01-13 22:04:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 01:58:40]  *** The last 200 lines of the pilot log: ***
[2026-01-14 01:58:40] 2026-01-14 00:57:16,654 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-14 01:58:40] 2026-01-14 00:57:16,664 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2820.87625
[2026-01-14 01:58:40] 2026-01-14 00:57:16,676 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6968661712/memory_monitor_summary.json (trf name=prmon)
[2026-01-14 01:58:40] 2026-01-14 00:57:16,677 | INFO     | extracted standard info from prmon json
[2026-01-14 01:58:40] 2026-01-14 00:57:16,677 | INFO     | extracted standard memory fields from prmon json
[2026-01-14 01:58:40] 2026-01-14 00:57:16,677 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-14 01:58:40] 2026-01-14 00:57:16,677 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 01:58:40] 2026-01-14 00:57:16,677 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 01:58:40] 2026-01-14 00:57:16,682 | INFO     | fitting pss+swap vs Time
[2026-01-14 01:58:40] 2026-01-14 00:57:16,682 | INFO     | sum of square deviations: 3723716330.0
[2026-01-14 01:58:40] 2026-01-14 00:57:16,683 | INFO     | sum of deviations: 34339183474.00004
[2026-01-14 01:58:40] 2026-01-14 00:57:16,684 | INFO     | mean x: 1768345246.0
[2026-01-14 01:58:40] 2026-01-14 00:57:16,684 | INFO     | mean y: 2368239.790393013
[2026-01-14 01:58:40] 2026-01-14 00:57:16,684 | INFO     | intersect: -16304870675.954224
[2026-01-14 01:58:40] 2026-01-14 00:57:16,684 | INFO     | chi2: 2.0975321532735336
[2026-01-14 01:58:40] 2026-01-14 00:57:16,685 | INFO     | sum of square deviations: 3485088600.0
[2026-01-14 01:58:40] 2026-01-14 00:57:16,686 | INFO     | sum of deviations: 48115223637.99999
[2026-01-14 01:58:40] 2026-01-14 00:57:16,686 | INFO     | mean x: 1768345093.5
[2026-01-14 01:58:40] 2026-01-14 00:57:16,686 | INFO     | mean y: 2376877.4196428573
[2026-01-14 01:58:40] 2026-01-14 00:57:16,686 | INFO     | intersect: -24411441366.0857
[2026-01-14 01:58:40] 2026-01-14 00:57:16,687 | INFO     | chi2: 1.3049524412800066
[2026-01-14 01:58:40] 2026-01-14 00:57:16,687 | INFO     | current chi2=1.3049524412800066 (change=37.78629618414096 %)
[2026-01-14 01:58:40] 2026-01-14 00:57:16,687 | INFO     | sum of square deviations: 3256879670.0
[2026-01-14 01:58:40] 2026-01-14 00:57:16,689 | INFO     | sum of deviations: 46842532020.99999
[2026-01-14 01:58:40] 2026-01-14 00:57:16,689 | INFO     | mean x: 1768344941.0
[2026-01-14 01:58:40] 2026-01-14 00:57:16,689 | INFO     | mean y: 2376025.8767123288
[2026-01-14 01:58:40] 2026-01-14 00:57:16,689 | INFO     | intersect: -25431094938.97654
[2026-01-14 01:58:40] 2026-01-14 00:57:16,689 | INFO     | chi2: 1.304668015742807
[2026-01-14 01:58:40] 2026-01-14 00:57:16,689 | INFO     | current chi2=1.304668015742807 (change=0.021795854638247375 %)
[2026-01-14 01:58:40] 2026-01-14 00:57:16,689 | INFO     | right removable region: 218
[2026-01-14 01:58:40] 2026-01-14 00:57:16,690 | INFO     | sum of square deviations: 3485088600.0
[2026-01-14 01:58:40] 2026-01-14 00:57:16,691 | INFO     | sum of deviations: 4529668948.0
[2026-01-14 01:58:40] 2026-01-14 00:57:16,691 | INFO     | mean x: 1768345398.5
[2026-01-14 01:58:40] 2026-01-14 00:57:16,691 | INFO     | mean y: 2387078.7053571427
[2026-01-14 01:58:40] 2026-01-14 00:57:16,692 | INFO     | intersect: -2295981818.1210065
[2026-01-14 01:58:40] 2026-01-14 00:57:16,693 | INFO     | chi2: 0.8264834808580295
[2026-01-14 01:58:40] 2026-01-14 00:57:16,693 | INFO     | current chi2=0.8264834808580295 (change=60.59733913646234 %)
[2026-01-14 01:58:40] 2026-01-14 00:57:16,693 | INFO     | sum of square deviations: 3256879670.0
[2026-01-14 01:58:40] 2026-01-14 00:57:16,695 | INFO     | sum of deviations: 716432678.0
[2026-01-14 01:58:40] 2026-01-14 00:57:16,695 | INFO     | mean x: 1768345551.0
[2026-01-14 01:58:40] 2026-01-14 00:57:16,695 | INFO     | mean y: 2389600.1826484017
[2026-01-14 01:58:40] 2026-01-14 00:57:16,695 | INFO     | intersect: -386602523.2912642
[2026-01-14 01:58:40] 2026-01-14 00:57:16,695 | INFO     | chi2: 0.810196518325542
[2026-01-14 01:58:40] 2026-01-14 00:57:16,695 | INFO     | current chi2=0.810196518325542 (change=1.9706337645827954 %)
[2026-01-14 01:58:40] 2026-01-14 00:57:16,695 | INFO     | left removable region: 20
[2026-01-14 01:58:40] 2026-01-14 00:57:16,696 | INFO     | sum of square deviations: 2406926989.5
[2026-01-14 01:58:40] 2026-01-14 00:57:16,697 | INFO     | sum of deviations: 11071768461.0
[2026-01-14 01:58:40] 2026-01-14 00:57:16,697 | INFO     | mean x: 1768345520.5
[2026-01-14 01:58:40] 2026-01-14 00:57:16,697 | INFO     | mean y: 2400996.6565656564
[2026-01-14 01:58:40] 2026-01-14 00:57:16,697 | INFO     | intersect: -8131918094.6299095
[2026-01-14 01:58:40] 2026-01-14 00:57:16,698 | INFO     | chi2: 0.0008976839328236854
[2026-01-14 01:58:40] 2026-01-14 00:57:16,698 | INFO     | current memory leak: 4.60 B/s (using 198 data points, chi2=0.00)
[2026-01-14 01:58:40] 2026-01-14 00:57:16,698 | INFO     | could have reported an average CPU frequency of 2809 MHz (11 samples)
[2026-01-14 01:58:40] 2026-01-14 00:57:16,699 | INFO     | ..............................
[2026-01-14 01:58:40] 2026-01-14 00:57:16,699 | INFO     | . Timing measurements:
[2026-01-14 01:58:40] 2026-01-14 00:57:16,699 | INFO     | . get job = 0 s
[2026-01-14 01:58:40] 2026-01-14 00:57:16,699 | INFO     | . initial setup = 1 s
[2026-01-14 01:58:40] 2026-01-14 00:57:16,699 | INFO     | . payload setup = 5 s
[2026-01-14 01:58:40] 2026-01-14 00:57:16,699 | INFO     | . stage-in = 0 s
[2026-01-14 01:58:40] 2026-01-14 00:57:16,699 | INFO     | . payload execution = 13935 s
[2026-01-14 01:58:40] 2026-01-14 00:57:16,699 | INFO     | . stage-out = 1 s
[2026-01-14 01:58:40] 2026-01-14 00:57:16,699 | INFO     | . log creation = 0 s
[2026-01-14 01:58:40] 2026-01-14 00:57:16,699 | INFO     | ..............................
[2026-01-14 01:58:40] 2026-01-14 00:57:16,790 | INFO     | 
[2026-01-14 01:58:40] 2026-01-14 00:57:16,791 | INFO     | job summary report
[2026-01-14 01:58:40] 2026-01-14 00:57:16,791 | INFO     | --------------------------------------------------
[2026-01-14 01:58:40] 2026-01-14 00:57:16,791 | INFO     | PanDA job id: 6968661712
[2026-01-14 01:58:40] 2026-01-14 00:57:16,791 | INFO     | task id: 48188528
[2026-01-14 01:58:40] 2026-01-14 00:57:16,791 | INFO     | errors: (none)
[2026-01-14 01:58:40] 2026-01-14 00:57:16,791 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 01:58:40] 2026-01-14 00:57:16,791 | INFO     | pilot state: finished 
[2026-01-14 01:58:40] 2026-01-14 00:57:16,791 | INFO     | transexitcode: 0
[2026-01-14 01:58:40] 2026-01-14 00:57:16,791 | INFO     | exeerrorcode: 0
[2026-01-14 01:58:40] 2026-01-14 00:57:16,791 | INFO     | exeerrordiag: 
[2026-01-14 01:58:40] 2026-01-14 00:57:16,791 | INFO     | exitcode: 0
[2026-01-14 01:58:40] 2026-01-14 00:57:16,792 | INFO     | exitmsg: OK
[2026-01-14 01:58:40] 2026-01-14 00:57:16,792 | INFO     | cpuconsumptiontime: 53994 s
[2026-01-14 01:58:40] 2026-01-14 00:57:16,792 | INFO     | nevents: 400
[2026-01-14 01:58:40] 2026-01-14 00:57:16,792 | INFO     | neventsw: 0
[2026-01-14 01:58:40] 2026-01-14 00:57:16,792 | INFO     | pid: 2661771
[2026-01-14 01:58:40] 2026-01-14 00:57:16,792 | INFO     | pgrp: 2661771
[2026-01-14 01:58:40] 2026-01-14 00:57:16,792 | INFO     | corecount: 4
[2026-01-14 01:58:40] 2026-01-14 00:57:16,792 | INFO     | event service: False
[2026-01-14 01:58:40] 2026-01-14 00:57:16,792 | INFO     | sizes: {0: 2284149, 4: 2284411, 11: 2284439, 13944: 2314951, 13946: 2324055, 13955: 2324193}
[2026-01-14 01:58:40] 2026-01-14 00:57:16,792 | INFO     | --------------------------------------------------
[2026-01-14 01:58:40] 2026-01-14 00:57:16,792 | INFO     | 
[2026-01-14 01:58:40] 2026-01-14 00:57:16,792 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2026-01-14 01:58:40] 2026-01-14 00:57:16,813 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 01:58:40] 2026-01-14 00:57:16,814 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 01:58:40] 2026-01-14 00:57:16,814 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 01:58:40] 2026-01-14 00:57:16,814 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 01:58:40] 2026-01-14 00:57:16,814 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 01:58:40] 2026-01-14 00:57:16,814 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 01:58:40] 2026-01-14 00:57:16,814 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 01:58:40] 2026-01-14 00:57:16,814 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 01:58:40] 2026-01-14 00:57:16,814 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 01:58:40] 2026-01-14 00:57:16,814 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 01:58:40] 2026-01-14 00:57:16,814 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 01:58:40] 2026-01-14 00:57:16,814 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 01:58:40] 2026-01-14 00:57:16,815 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 01:58:40] 2026-01-14 00:57:16,815 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 01:58:40] 2026-01-14 00:57:16,815 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 01:58:40] 2026-01-14 00:57:16,815 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 01:58:40] 2026-01-14 00:57:16,815 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 01:58:40] 2026-01-14 00:57:16,815 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 01:58:40] 2026-01-14 00:57:16,815 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 01:58:40] 2026-01-14 00:57:16,815 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 01:58:40] 2026-01-14 00:57:16,815 | INFO     | job 6968661712 has completed (purged errors)
[2026-01-14 01:58:40] 2026-01-14 00:57:16,815 | INFO     | overall cleanup function is called
[2026-01-14 01:58:40] 2026-01-14 00:57:17,820 | INFO     | --- collectZombieJob: --- 10, [2661771]
[2026-01-14 01:58:40] 2026-01-14 00:57:17,820 | INFO     | zombie collector waiting for pid 2661771
[2026-01-14 01:58:40] 2026-01-14 00:57:17,820 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 01:58:40] 2026-01-14 00:57:17,820 | INFO     | collected zombie processes
[2026-01-14 01:58:40] 2026-01-14 00:57:17,820 | INFO     | will attempt to kill all subprocesses of pid=2661771
[2026-01-14 01:58:40] 2026-01-14 00:57:18,184 | INFO     | process IDs to be killed: [2661771] (in reverse order)
[2026-01-14 01:58:40] 2026-01-14 00:57:18,297 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 01:58:40] 2026-01-14 00:57:18,298 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 01:58:40] 2026-01-14 00:57:18,311 | INFO     | did not find any defunct processes belonging to 2661771
[2026-01-14 01:58:40] 2026-01-14 00:57:18,323 | INFO     | did not find any defunct processes belonging to 2661771
[2026-01-14 01:58:40] 2026-01-14 00:57:18,324 | INFO     | ready for new job
[2026-01-14 01:58:40] 2026-01-14 00:57:18,324 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 01:58:40] 2026-01-14 00:57:18,327 | INFO     | ***************************************
[2026-01-14 01:58:40] 2026-01-14 00:57:18,327 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 01:58:40] 2026-01-14 00:57:18,327 | INFO     | ***************************************
[2026-01-14 01:58:40] 2026-01-14 00:57:18,327 | INFO     | 
[2026-01-14 01:58:40] 2026-01-14 00:57:18,331 | INFO     | architecture information:
[2026-01-14 01:58:40] 2026-01-14 00:57:18,331 | INFO     | executing command: cat /etc/os-release
[2026-01-14 01:58:40] 2026-01-14 00:57:18,347 | INFO     | cat /etc/os-release:
[2026-01-14 01:58:40] NAME="CentOS Linux"
[2026-01-14 01:58:40] VERSION="7 (Core)"
[2026-01-14 01:58:40] ID="centos"
[2026-01-14 01:58:40] ID_LIKE="rhel fedora"
[2026-01-14 01:58:40] VERSION_ID="7"
[2026-01-14 01:58:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 01:58:40] ANSI_COLOR="0;31"
[2026-01-14 01:58:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 01:58:40] HOME_URL="https://www.centos.org/"
[2026-01-14 01:58:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 01:58:40] 
[2026-01-14 01:58:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 01:58:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 01:58:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 01:58:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 01:58:40] 
[2026-01-14 01:58:40] 2026-01-14 00:57:18,348 | INFO     | ***************************************
[2026-01-14 01:58:40] 2026-01-14 00:57:18,851 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2026-01-14 01:58:40] 2026-01-14 00:57:18,867 | INFO     | sufficient remaining disk space (689902190592 B)
[2026-01-14 01:58:40] 2026-01-14 00:57:18,868 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 01:58:40] 2026-01-14 00:57:18,868 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 01:58:40] 2026-01-14 00:57:18,868 | INFO     | update_server=False
[2026-01-14 01:58:40] 2026-01-14 00:57:18,868 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 01:58:40] 2026-01-14 00:57:18,868 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 01:58:40] 2026-01-14 00:57:18,869 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 01:58:40] 2026-01-14 00:57:19,130 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-14 01:58:40] 2026-01-14 00:57:19,131 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-14 01:58:40] 2026-01-14 00:57:19,131 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 01:58:40] 2026-01-14 00:57:19,131 | INFO     | will abort loop
[2026-01-14 01:58:40] 2026-01-14 00:57:19,363 | INFO     | all data control threads have been joined
[2026-01-14 01:58:40] 2026-01-14 00:57:19,378 | INFO     | all payload control threads have been joined
[2026-01-14 01:58:40] 2026-01-14 00:57:19,874 | INFO     | [job] retrieve thread has finished
[2026-01-14 01:58:40] 2026-01-14 00:57:20,136 | INFO     | [job] job monitor thread has finished
[2026-01-14 01:58:40] 2026-01-14 00:57:20,286 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 01:58:40] 2026-01-14 00:57:20,368 | INFO     | [data] control thread has finished
[2026-01-14 01:58:40] 2026-01-14 00:57:20,380 | INFO     | [payload] control thread has finished
[2026-01-14 01:58:40] 2026-01-14 00:57:20,380 | INFO     | all job control threads have been joined
[2026-01-14 01:58:40] 2026-01-14 00:57:20,393 | INFO     | [payload] failed_post thread has finished
[2026-01-14 01:58:40] 2026-01-14 00:57:20,447 | INFO     | [job] validate thread has finished
[2026-01-14 01:58:40] 2026-01-14 00:57:20,652 | INFO     | [data] copytool_in thread has finished
[2026-01-14 01:58:40] 2026-01-14 00:57:20,748 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 01:58:40] 2026-01-14 00:57:20,871 | INFO     | [data] copytool_out thread has finished
[2026-01-14 01:58:40] 2026-01-14 00:57:21,018 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 01:58:40] 2026-01-14 00:57:21,039 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 01:58:40] 2026-01-14 00:57:21,344 | INFO     | [payload] validate_post thread has finished
[2026-01-14 01:58:40] 2026-01-14 00:57:21,382 | INFO     | [job] control thread has finished
[2026-01-14 01:58:40] 2026-01-14 00:57:21,800 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 01:58:40] 2026-01-14 00:57:22,805 | INFO     | [job] queue monitor thread has finished
[2026-01-14 01:58:40] 2026-01-14 00:57:22,874 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 01:58:40] 2026-01-14 00:57:46,580 | INFO     | [monitor] cgroup control has ended
[2026-01-14 01:58:40] 2026-01-14 00:57:48,245 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23416554092352)>', '<ExcThread(monitor, started 23416318957312)>']
[2026-01-14 01:58:40] 2026-01-14 00:57:48,596 | INFO     | PID=2642945 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 01:58:40] 2026-01-14 00:57:48,597 | INFO     | .. there are 5 such processes running
[2026-01-14 01:58:40] 2026-01-14 00:57:48,597 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 01:58:40] 2026-01-14 00:57:48,597 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 01:58:40] 2026-01-14 00:57:48,597 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 01:58:40] 2026-01-14 00:57:48,598 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 01:58:40] 2026-01-14 00:57:48,598 | INFO     | [monitor] control thread has ended
[2026-01-14 01:58:40] 2026-01-14 00:57:53,271 | INFO     | all workflow threads have been joined
[2026-01-14 01:58:40] 2026-01-14 00:57:53,272 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 01:58:40] 2026-01-14 00:57:53,272 | INFO     | traces error code: 0
[2026-01-14 01:58:40] 2026-01-14 00:57:53,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 01:58:40] 2026-01-14 00:57:53,411 [wrapper] ==== pilot stdout END ====
[2026-01-14 01:58:40] 2026-01-14 00:57:53,414 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 01:58:40] 2026-01-14 00:57:53,416 [wrapper] pilotpid: 2642945
[2026-01-14 01:58:40] 2026-01-14 00:57:53,418 [wrapper] Pilot exit status: 0
[2026-01-14 01:58:40] 2026-01-14 00:57:53,428 [wrapper] pandaids: 6968661712
[2026-01-14 01:58:40] 2026-01-14 00:57:53,502 [wrapper] cleanup supervisor_pilot 2874748 2642946
[2026-01-14 01:58:40] 2026-01-14 00:57:53,505 [wrapper] Test setup, not cleaning
[2026-01-14 01:58:40] 2026-01-14 00:57:53,507 [wrapper] apfmon messages muted
[2026-01-14 01:58:40] 2026-01-14 00:57:53,510 [wrapper] ==== wrapper stdout END ====
[2026-01-14 01:58:40] 2026-01-14 00:57:53,512 [wrapper] ==== wrapper stderr END ====
[2026-01-14 01:58:40]  *** Error codes and diagnostics ***
[2026-01-14 01:58:40]     "exeErrorCode": 0,
[2026-01-14 01:58:40]     "exeErrorDiag": "",
[2026-01-14 01:58:40]     "pilotErrorCode": 0,
[2026-01-14 01:58:40]     "pilotErrorDiag": "",
[2026-01-14 01:58:40]  *** Listing of results directory ***
[2026-01-14 01:58:40] total 613976
[2026-01-14 01:58:40] -rw-r--r-- 1 boinc boinc    579449 Jan 13 12:09 pilot3.tar.gz
[2026-01-14 01:58:40] -rw-r--r-- 1 boinc boinc      5112 Jan 13 13:02 queuedata.json
[2026-01-14 01:58:40] -rwx------ 1 boinc boinc     36322 Jan 13 13:02 runpilot2-wrapper.sh
[2026-01-14 01:58:40] -rw-r--r-- 1 boinc boinc       100 Jan 13 22:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 01:58:40] -rwxr-xr-x 1 boinc boinc      7986 Jan 13 22:04 run_atlas
[2026-01-14 01:58:40] -rw-r--r-- 1 boinc boinc       105 Jan 13 22:04 job.xml
[2026-01-14 01:58:40] -rw-r--r-- 2 boinc boinc 317512348 Jan 13 22:04 EVNT.48188524._000009.pool.root.1
[2026-01-14 01:58:40] -rw-r--r-- 1 boinc boinc      6637 Jan 13 22:04 init_data.xml
[2026-01-14 01:58:40] -rw-r--r-- 2 boinc boinc     15847 Jan 13 22:04 start_atlas.sh
[2026-01-14 01:58:40] drwxrwx--x 2 boinc boinc      4096 Jan 13 22:04 shared
[2026-01-14 01:58:40] -rw-r--r-- 2 boinc boinc    592415 Jan 13 22:04 input.tar.gz
[2026-01-14 01:58:40] -rw-r--r-- 1 boinc boinc         0 Jan 13 22:04 boinc_lockfile
[2026-01-14 01:58:40] -rw-r--r-- 1 boinc boinc      2642 Jan 13 22:04 pandaJob.out
[2026-01-14 01:58:40] -rw------- 1 boinc boinc    997226 Jan 13 22:04 agis_schedconf.cvmfs.json
[2026-01-14 01:58:40] drwx------ 5 boinc boinc      4096 Jan 13 22:04 pilot3
[2026-01-14 01:58:40] -rw------- 1 boinc boinc 302398348 Jan 14 01:56 HITS.48188528._000223.pool.root.1
[2026-01-14 01:58:40] -rw-r--r-- 1 boinc boinc       528 Jan 14 01:56 boinc_task_state.xml
[2026-01-14 01:58:40] -rw------- 1 boinc boinc      1045 Jan 14 01:57 memory_monitor_summary.json
[2026-01-14 01:58:40] -rw------- 1 boinc boinc   1516246 Jan 14 01:57 agis_ddmendpoints.agis.ALL.json
[2026-01-14 01:58:40] -rw------- 1 boinc boinc    460857 Jan 14 01:57 log.48188528._000223.job.log.tgz.1
[2026-01-14 01:58:40] -rw------- 1 boinc boinc      7816 Jan 14 01:57 heartbeat.json
[2026-01-14 01:58:40] -rw------- 1 boinc boinc        95 Jan 14 01:57 pilot_heartbeat.json
[2026-01-14 01:58:40] -rw------- 1 boinc boinc      5019 Jan 14 01:57 pilotlog.txt
[2026-01-14 01:58:40] -rw------- 1 boinc boinc   1982042 Jan 14 01:57 log.48188528._000223.job.log.1
[2026-01-14 01:58:40] -rw------- 1 boinc boinc       357 Jan 14 01:57 output.list
[2026-01-14 01:58:40] -rw-r--r-- 1 boinc boinc       620 Jan 14 01:57 runtime_log
[2026-01-14 01:58:40] -rw------- 1 boinc boinc   2457600 Jan 14 01:57 result.tar.gz
[2026-01-14 01:58:40] -rw-r--r-- 1 boinc boinc      9206 Jan 14 01:57 runtime_log.err
[2026-01-14 01:58:40] -rw------- 1 boinc boinc       664 Jan 14 01:57 oo5LDmwHsz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmE1nKDmuoUOOo.diag
[2026-01-14 01:58:40] -rw-r--r-- 1 boinc boinc        27 Jan 14 01:58 wrapper_checkpoint.txt
[2026-01-14 01:58:40] -rw-r--r-- 1 boinc boinc      8192 Jan 14 01:58 boinc_mmap_file
[2026-01-14 01:58:40] -rw-r--r-- 1 boinc boinc     20838 Jan 14 01:58 stderr.txt
[2026-01-14 01:58:40] HITS file was successfully produced:
[2026-01-14 01:58:40] -rw------- 1 boinc boinc 302398348 Jan 14 01:56 shared/HITS.pool.root.1
[2026-01-14 01:58:40]  *** Contents of shared directory: ***
[2026-01-14 01:58:40] total 608388
[2026-01-14 01:58:40] -rw-r--r-- 2 boinc boinc 317512348 Jan 13 22:04 ATLAS.root_0
[2026-01-14 01:58:40] -rw-r--r-- 2 boinc boinc     15847 Jan 13 22:04 start_atlas.sh
[2026-01-14 01:58:40] -rw-r--r-- 2 boinc boinc    592415 Jan 13 22:04 input.tar.gz
[2026-01-14 01:58:40] -rw------- 1 boinc boinc 302398348 Jan 14 01:56 HITS.pool.root.1
[2026-01-14 01:58:40] -rw------- 1 boinc boinc   2457600 Jan 14 01:57 result.tar.gz
01:58:42 (2636693): run_atlas exited; CPU time 54575.609613
01:58:42 (2636693): called boinc_finish(0)

</stderr_txt>
]]>

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