Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:04:32 (2421904): wrapper (7.7.26015): starting
18:04:32 (2421904): wrapper: running run_atlas (--nthreads 4)
[2026-01-13 18:04:32] Arguments: --nthreads 4
[2026-01-13 18:04:32] Threads: 4
[2026-01-13 18:04:32] Checking for CVMFS
[2026-01-13 18:04:32] No cvmfs_config command found, will try listing directly
[2026-01-13 18:04:32] CVMFS is ok
[2026-01-13 18:04:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 18:04:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 18:04:32] Further information can be found at the LHC@home message board.
[2026-01-13 18:04:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 18:04:32] Checking for apptainer binary...
[2026-01-13 18:04:32] which: no apptainer in ((null))
[2026-01-13 18:04:32] apptainer is not installed, using version from CVMFS
[2026-01-13 18:04:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 18:04:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-01-13 18:04:32] apptainer works
[2026-01-13 18:04:32] Set ATHENA_PROC_NUMBER=4
[2026-01-13 18:04:32] Set ATHENA_CORE_NUMBER=4
[2026-01-13 18:04:32] Starting ATLAS job with PandaID=6968661707
[2026-01-13 18:04:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 22:04:06]  *** The last 200 lines of the pilot log: ***
[2026-01-13 22:04:06] 2026-01-13 20:53:04,398 | INFO     | current chi2=1.3552325877061104 (change=0.04471590653301327 %)
[2026-01-13 22:04:06] 2026-01-13 20:53:04,399 | INFO     | right removable region: 218
[2026-01-13 22:04:06] 2026-01-13 20:53:04,399 | INFO     | sum of square deviations: 3256879670.0
[2026-01-13 22:04:06] 2026-01-13 20:53:04,400 | INFO     | sum of deviations: -7547905759.999998
[2026-01-13 22:04:06] 2026-01-13 20:53:04,400 | INFO     | mean x: 1768330863.0
[2026-01-13 22:04:06] 2026-01-13 20:53:04,401 | INFO     | mean y: 2412456.228310502
[2026-01-13 22:04:06] 2026-01-13 20:53:04,401 | INFO     | intersect: 4100566535.8426394
[2026-01-13 22:04:06] 2026-01-13 20:53:04,401 | INFO     | chi2: 0.16670477864449218
[2026-01-13 22:04:06] 2026-01-13 20:53:04,401 | INFO     | current chi2=0.16670477864449218 (change=87.70467618598748 %)
[2026-01-13 22:04:06] 2026-01-13 20:53:04,401 | INFO     | sum of square deviations: 3038856977.5
[2026-01-13 22:04:06] 2026-01-13 20:53:04,403 | INFO     | sum of deviations: 4420383605.0
[2026-01-13 22:04:06] 2026-01-13 20:53:04,403 | INFO     | mean x: 1768331015.5
[2026-01-13 22:04:06] 2026-01-13 20:53:04,403 | INFO     | mean y: 2404077.971962617
[2026-01-13 22:04:06] 2026-01-13 20:53:04,403 | INFO     | intersect: -2569846438.2599096
[2026-01-13 22:04:06] 2026-01-13 20:53:04,404 | INFO     | chi2: 0.05799674320028065
[2026-01-13 22:04:06] 2026-01-13 20:53:04,404 | INFO     | current chi2=0.05799674320028065 (change=65.20990959475604 %)
[2026-01-13 22:04:06] 2026-01-13 20:53:04,404 | INFO     | sum of square deviations: 2830787960.0
[2026-01-13 22:04:06] 2026-01-13 20:53:04,405 | INFO     | sum of deviations: 8432039211.0
[2026-01-13 22:04:06] 2026-01-13 20:53:04,405 | INFO     | mean x: 1768331168.0
[2026-01-13 22:04:06] 2026-01-13 20:53:04,406 | INFO     | mean y: 2401195.28708134
[2026-01-13 22:04:06] 2026-01-13 20:53:04,406 | INFO     | intersect: -5264908810.726025
[2026-01-13 22:04:06] 2026-01-13 20:53:04,406 | INFO     | chi2: 0.0015120782774300282
[2026-01-13 22:04:06] 2026-01-13 20:53:04,406 | INFO     | current chi2=0.0015120782774300282 (change=97.39282208966742 %)
[2026-01-13 22:04:06] 2026-01-13 20:53:04,407 | INFO     | sum of square deviations: 2632440055.0
[2026-01-13 22:04:06] 2026-01-13 20:53:04,408 | INFO     | sum of deviations: 7154096104.0
[2026-01-13 22:04:06] 2026-01-13 20:53:04,408 | INFO     | mean x: 1768331320.5
[2026-01-13 22:04:06] 2026-01-13 20:53:04,408 | INFO     | mean y: 2402176.911764706
[2026-01-13 22:04:06] 2026-01-13 20:53:04,408 | INFO     | intersect: -4803333925.812224
[2026-01-13 22:04:06] 2026-01-13 20:53:04,408 | INFO     | chi2: 0.0010514813038927148
[2026-01-13 22:04:06] 2026-01-13 20:53:04,409 | INFO     | current chi2=0.0010514813038927148 (change=30.461185800523328 %)
[2026-01-13 22:04:06] 2026-01-13 20:53:04,409 | INFO     | sum of square deviations: 2443580700.0
[2026-01-13 22:04:06] 2026-01-13 20:53:04,410 | INFO     | sum of deviations: 6383939933.000001
[2026-01-13 22:04:06] 2026-01-13 20:53:04,410 | INFO     | mean x: 1768331473.0
[2026-01-13 22:04:06] 2026-01-13 20:53:04,410 | INFO     | mean y: 2402793.286432161
[2026-01-13 22:04:06] 2026-01-13 20:53:04,411 | INFO     | intersect: -4617424947.72716
[2026-01-13 22:04:06] 2026-01-13 20:53:04,411 | INFO     | chi2: 0.0007561776478169355
[2026-01-13 22:04:06] 2026-01-13 20:53:04,411 | INFO     | current chi2=0.0007561776478169355 (change=28.084537022439516 %)
[2026-01-13 22:04:06] 2026-01-13 20:53:04,411 | INFO     | sum of square deviations: 2263977332.5
[2026-01-13 22:04:06] 2026-01-13 20:53:04,412 | INFO     | sum of deviations: 6180799410.500004
[2026-01-13 22:04:06] 2026-01-13 20:53:04,413 | INFO     | mean x: 1768331625.5
[2026-01-13 22:04:06] 2026-01-13 20:53:04,413 | INFO     | mean y: 2402966.8402061854
[2026-01-13 22:04:06] 2026-01-13 20:53:04,413 | INFO     | intersect: -4825252730.750093
[2026-01-13 22:04:06] 2026-01-13 20:53:04,413 | INFO     | chi2: 0.0006580335624813455
[2026-01-13 22:04:06] 2026-01-13 20:53:04,413 | INFO     | current chi2=0.0006580335624813455 (change=12.97897202052049 %)
[2026-01-13 22:04:06] 2026-01-13 20:53:04,413 | INFO     | left removable region: 60
[2026-01-13 22:04:06] 2026-01-13 20:53:04,414 | INFO     | sum of square deviations: 1223016419.5
[2026-01-13 22:04:06] 2026-01-13 20:53:04,414 | INFO     | sum of deviations: 2588317382.5
[2026-01-13 22:04:06] 2026-01-13 20:53:04,415 | INFO     | mean x: 1768332357.5
[2026-01-13 22:04:06] 2026-01-13 20:53:04,415 | INFO     | mean y: 2404483.094936709
[2026-01-13 22:04:06] 2026-01-13 20:53:04,415 | INFO     | intersect: -3739986302.4888334
[2026-01-13 22:04:06] 2026-01-13 20:53:04,415 | INFO     | chi2: 0.00018056339621922804
[2026-01-13 22:04:06] 2026-01-13 20:53:04,415 | INFO     | current memory leak: 2.12 B/s (using 158 data points, chi2=0.00)
[2026-01-13 22:04:06] 2026-01-13 20:53:04,416 | INFO     | could have reported an average CPU frequency of 2838 MHz (11 samples)
[2026-01-13 22:04:06] 2026-01-13 20:53:04,416 | INFO     | ..............................
[2026-01-13 22:04:06] 2026-01-13 20:53:04,416 | INFO     | . Timing measurements:
[2026-01-13 22:04:06] 2026-01-13 20:53:04,416 | INFO     | . get job = 0 s
[2026-01-13 22:04:06] 2026-01-13 20:53:04,416 | INFO     | . initial setup = 1 s
[2026-01-13 22:04:06] 2026-01-13 20:53:04,416 | INFO     | . payload setup = 5 s
[2026-01-13 22:04:06] 2026-01-13 20:53:04,416 | INFO     | . stage-in = 0 s
[2026-01-13 22:04:06] 2026-01-13 20:53:04,417 | INFO     | . payload execution = 13667 s
[2026-01-13 22:04:06] 2026-01-13 20:53:04,417 | INFO     | . stage-out = 1 s
[2026-01-13 22:04:06] 2026-01-13 20:53:04,417 | INFO     | . log creation = 0 s
[2026-01-13 22:04:06] 2026-01-13 20:53:04,417 | INFO     | ..............................
[2026-01-13 22:04:06] 2026-01-13 20:53:04,424 | INFO     | time since job start (13702s) is within the limit (349056.0s)
[2026-01-13 22:04:06] 2026-01-13 20:53:04,518 | INFO     | 
[2026-01-13 22:04:06] 2026-01-13 20:53:04,518 | INFO     | job summary report
[2026-01-13 22:04:06] 2026-01-13 20:53:04,518 | INFO     | --------------------------------------------------
[2026-01-13 22:04:06] 2026-01-13 20:53:04,518 | INFO     | PanDA job id: 6968661707
[2026-01-13 22:04:06] 2026-01-13 20:53:04,518 | INFO     | task id: 48188528
[2026-01-13 22:04:06] 2026-01-13 20:53:04,518 | INFO     | errors: (none)
[2026-01-13 22:04:06] 2026-01-13 20:53:04,518 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 22:04:06] 2026-01-13 20:53:04,518 | INFO     | pilot state: finished 
[2026-01-13 22:04:06] 2026-01-13 20:53:04,518 | INFO     | transexitcode: 0
[2026-01-13 22:04:06] 2026-01-13 20:53:04,518 | INFO     | exeerrorcode: 0
[2026-01-13 22:04:06] 2026-01-13 20:53:04,518 | INFO     | exeerrordiag: 
[2026-01-13 22:04:06] 2026-01-13 20:53:04,519 | INFO     | exitcode: 0
[2026-01-13 22:04:06] 2026-01-13 20:53:04,519 | INFO     | exitmsg: OK
[2026-01-13 22:04:06] 2026-01-13 20:53:04,519 | INFO     | cpuconsumptiontime: 53208 s
[2026-01-13 22:04:06] 2026-01-13 20:53:04,519 | INFO     | nevents: 400
[2026-01-13 22:04:06] 2026-01-13 20:53:04,519 | INFO     | neventsw: 0
[2026-01-13 22:04:06] 2026-01-13 20:53:04,519 | INFO     | pid: 2432921
[2026-01-13 22:04:06] 2026-01-13 20:53:04,519 | INFO     | pgrp: 2432921
[2026-01-13 22:04:06] 2026-01-13 20:53:04,519 | INFO     | corecount: 4
[2026-01-13 22:04:06] 2026-01-13 20:53:04,519 | INFO     | event service: False
[2026-01-13 22:04:06] 2026-01-13 20:53:04,519 | INFO     | sizes: {0: 2283978, 1: 2284177, 5: 2284439, 11: 2284495, 13676: 2314947, 13678: 2323967, 13680: 2324151, 13686: 2324345}
[2026-01-13 22:04:06] 2026-01-13 20:53:04,519 | INFO     | --------------------------------------------------
[2026-01-13 22:04:06] 2026-01-13 20:53:04,519 | INFO     | 
[2026-01-13 22:04:06] 2026-01-13 20:53:04,519 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2026-01-13 22:04:06] 2026-01-13 20:53:04,539 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 22:04:06] 2026-01-13 20:53:04,540 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 22:04:06] 2026-01-13 20:53:04,540 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 22:04:06] 2026-01-13 20:53:04,540 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 22:04:06] 2026-01-13 20:53:04,540 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 22:04:06] 2026-01-13 20:53:04,540 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 22:04:06] 2026-01-13 20:53:04,540 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 22:04:06] 2026-01-13 20:53:04,540 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 22:04:06] 2026-01-13 20:53:04,540 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 22:04:06] 2026-01-13 20:53:04,540 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 22:04:06] 2026-01-13 20:53:04,541 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 22:04:06] 2026-01-13 20:53:04,541 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 22:04:06] 2026-01-13 20:53:04,541 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 22:04:06] 2026-01-13 20:53:04,541 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 22:04:06] 2026-01-13 20:53:04,541 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 22:04:06] 2026-01-13 20:53:04,541 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 22:04:06] 2026-01-13 20:53:04,541 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 22:04:06] 2026-01-13 20:53:04,541 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 22:04:06] 2026-01-13 20:53:04,541 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 22:04:06] 2026-01-13 20:53:04,541 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 22:04:06] 2026-01-13 20:53:04,542 | INFO     | job 6968661707 has completed (purged errors)
[2026-01-13 22:04:06] 2026-01-13 20:53:04,542 | INFO     | overall cleanup function is called
[2026-01-13 22:04:06] 2026-01-13 20:53:05,550 | INFO     | --- collectZombieJob: --- 10, [2432921]
[2026-01-13 22:04:06] 2026-01-13 20:53:05,550 | INFO     | zombie collector waiting for pid 2432921
[2026-01-13 22:04:06] 2026-01-13 20:53:05,550 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 22:04:06] 2026-01-13 20:53:05,550 | INFO     | collected zombie processes
[2026-01-13 22:04:06] 2026-01-13 20:53:05,550 | INFO     | will attempt to kill all subprocesses of pid=2432921
[2026-01-13 22:04:06] 2026-01-13 20:53:05,882 | INFO     | process IDs to be killed: [2432921] (in reverse order)
[2026-01-13 22:04:06] 2026-01-13 20:53:05,976 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 22:04:06] 2026-01-13 20:53:05,976 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 22:04:06] 2026-01-13 20:53:05,987 | INFO     | did not find any defunct processes belonging to 2432921
[2026-01-13 22:04:06] 2026-01-13 20:53:05,997 | INFO     | did not find any defunct processes belonging to 2432921
[2026-01-13 22:04:06] 2026-01-13 20:53:05,997 | INFO     | ready for new job
[2026-01-13 22:04:06] 2026-01-13 20:53:05,997 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 22:04:06] 2026-01-13 20:53:05,999 | INFO     | ***************************************
[2026-01-13 22:04:06] 2026-01-13 20:53:05,999 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 22:04:06] 2026-01-13 20:53:05,999 | INFO     | ***************************************
[2026-01-13 22:04:06] 2026-01-13 20:53:05,999 | INFO     | 
[2026-01-13 22:04:06] 2026-01-13 20:53:06,003 | INFO     | architecture information:
[2026-01-13 22:04:06] 2026-01-13 20:53:06,004 | INFO     | executing command: cat /etc/os-release
[2026-01-13 22:04:06] 2026-01-13 20:53:06,017 | INFO     | cat /etc/os-release:
[2026-01-13 22:04:06] NAME="CentOS Linux"
[2026-01-13 22:04:06] VERSION="7 (Core)"
[2026-01-13 22:04:06] ID="centos"
[2026-01-13 22:04:06] ID_LIKE="rhel fedora"
[2026-01-13 22:04:06] VERSION_ID="7"
[2026-01-13 22:04:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 22:04:06] ANSI_COLOR="0;31"
[2026-01-13 22:04:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 22:04:06] HOME_URL="https://www.centos.org/"
[2026-01-13 22:04:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 22:04:06] 
[2026-01-13 22:04:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 22:04:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 22:04:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 22:04:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 22:04:06] 
[2026-01-13 22:04:06] 2026-01-13 20:53:06,017 | INFO     | ***************************************
[2026-01-13 22:04:06] 2026-01-13 20:53:06,520 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2026-01-13 22:04:06] 2026-01-13 20:53:06,534 | INFO     | sufficient remaining disk space (703651119104 B)
[2026-01-13 22:04:06] 2026-01-13 20:53:06,535 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 22:04:06] 2026-01-13 20:53:06,535 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 22:04:06] 2026-01-13 20:53:06,535 | INFO     | update_server=False
[2026-01-13 22:04:06] 2026-01-13 20:53:06,535 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 22:04:06] 2026-01-13 20:53:06,707 | INFO     | all job control threads have been joined
[2026-01-13 22:04:06] 2026-01-13 20:53:06,784 | INFO     | all data control threads have been joined
[2026-01-13 22:04:06] 2026-01-13 20:53:07,140 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 22:04:06] 2026-01-13 20:53:07,141 | INFO     | aborting loop
[2026-01-13 22:04:06] 2026-01-13 20:53:07,363 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 22:04:06] 2026-01-13 20:53:07,540 | INFO     | [job] retrieve thread has finished
[2026-01-13 22:04:06] 2026-01-13 20:53:07,676 | INFO     | [data] copytool_in thread has finished
[2026-01-13 22:04:06] 2026-01-13 20:53:07,698 | INFO     | [payload] failed_post thread has finished
[2026-01-13 22:04:06] 2026-01-13 20:53:07,700 | INFO     | all payload control threads have been joined
[2026-01-13 22:04:06] 2026-01-13 20:53:07,710 | INFO     | [job] control thread has finished
[2026-01-13 22:04:06] 2026-01-13 20:53:07,778 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 22:04:06] 2026-01-13 20:53:07,786 | INFO     | [data] control thread has finished
[2026-01-13 22:04:06] 2026-01-13 20:53:08,146 | INFO     | [job] job monitor thread has finished
[2026-01-13 22:04:06] 2026-01-13 20:53:08,233 | INFO     | [job] validate thread has finished
[2026-01-13 22:04:06] 2026-01-13 20:53:08,541 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 22:04:06] 2026-01-13 20:53:08,666 | INFO     | [payload] validate_post thread has finished
[2026-01-13 22:04:06] 2026-01-13 20:53:08,705 | INFO     | [payload] control thread has finished
[2026-01-13 22:04:06] 2026-01-13 20:53:08,749 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 22:04:06] 2026-01-13 20:53:08,948 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 22:04:06] 2026-01-13 20:53:09,368 | INFO     | [data] copytool_out thread has finished
[2026-01-13 22:04:06] 2026-01-13 20:53:09,524 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 22:04:06] 2026-01-13 20:53:10,529 | INFO     | [job] queue monitor thread has finished
[2026-01-13 22:04:06] 2026-01-13 20:53:12,954 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 22:04:06] 2026-01-13 20:53:16,713 | INFO     | job.realtimelogging is not enabled
[2026-01-13 22:04:06] 2026-01-13 20:53:17,718 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 22:04:06] 2026-01-13 20:53:37,943 | INFO     | PID=2425703 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 22:04:06] 2026-01-13 20:53:37,943 | INFO     | .. there are 2 such processes running
[2026-01-13 22:04:06] 2026-01-13 20:53:37,943 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 22:04:06] 2026-01-13 20:53:37,943 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 22:04:06] 2026-01-13 20:53:37,943 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 22:04:06] 2026-01-13 20:54:01,861 | INFO     | [monitor] cgroup control has ended
[2026-01-13 22:04:06] 2026-01-13 20:54:03,377 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22823499626304)>', '<ExcThread(monitor, started 22823259039488)>']
[2026-01-13 22:04:06] 2026-01-13 20:54:04,065 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 22:04:06] 2026-01-13 20:54:04,065 | INFO     | [monitor] control thread has ended
[2026-01-13 22:04:06] 2026-01-13 20:54:08,394 | INFO     | all workflow threads have been joined
[2026-01-13 22:04:06] 2026-01-13 20:54:08,394 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 22:04:06] 2026-01-13 20:54:08,395 | INFO     | traces error code: 0
[2026-01-13 22:04:06] 2026-01-13 20:54:08,395 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 22:04:06] 2026-01-13 20:54:08,555 [wrapper] ==== pilot stdout END ====
[2026-01-13 22:04:06] 2026-01-13 20:54:08,558 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 22:04:06] 2026-01-13 20:54:08,560 [wrapper] pilotpid: 2425703
[2026-01-13 22:04:06] 2026-01-13 20:54:08,563 [wrapper] Pilot exit status: 0
[2026-01-13 22:04:06] 2026-01-13 20:54:08,572 [wrapper] pandaids: 6968661707
[2026-01-13 22:04:06] 2026-01-13 20:54:08,640 [wrapper] cleanup supervisor_pilot 2609087 2425704
[2026-01-13 22:04:06] 2026-01-13 20:54:08,643 [wrapper] Test setup, not cleaning
[2026-01-13 22:04:06] 2026-01-13 20:54:08,646 [wrapper] apfmon messages muted
[2026-01-13 22:04:06] 2026-01-13 20:54:08,649 [wrapper] ==== wrapper stdout END ====
[2026-01-13 22:04:06] 2026-01-13 20:54:08,651 [wrapper] ==== wrapper stderr END ====
[2026-01-13 22:04:06]  *** Error codes and diagnostics ***
[2026-01-13 22:04:06]     "exeErrorCode": 0,
[2026-01-13 22:04:06]     "exeErrorDiag": "",
[2026-01-13 22:04:06]     "pilotErrorCode": 0,
[2026-01-13 22:04:06]     "pilotErrorDiag": "",
[2026-01-13 22:04:06]  *** Listing of results directory ***
[2026-01-13 22:04:06] total 599932
[2026-01-13 22:04:06] -rw-r--r-- 1 boinc boinc    579449 Jan 13 12:09 pilot3.tar.gz
[2026-01-13 22:04:06] -rw-r--r-- 1 boinc boinc      5112 Jan 13 13:02 queuedata.json
[2026-01-13 22:04:06] -rwx------ 1 boinc boinc     36322 Jan 13 13:02 runpilot2-wrapper.sh
[2026-01-13 22:04:06] -rw-r--r-- 1 boinc boinc       100 Jan 13 18:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 22:04:06] -rwxr-xr-x 1 boinc boinc      7986 Jan 13 18:04 run_atlas
[2026-01-13 22:04:06] -rw-r--r-- 1 boinc boinc       105 Jan 13 18:04 job.xml
[2026-01-13 22:04:06] -rw-r--r-- 1 boinc boinc      6637 Jan 13 18:04 init_data.xml
[2026-01-13 22:04:06] -rw-r--r-- 2 boinc boinc 317512348 Jan 13 18:04 EVNT.48188524._000009.pool.root.1
[2026-01-13 22:04:06] drwxrwx--x 2 boinc boinc      4096 Jan 13 18:04 shared
[2026-01-13 22:04:06] -rw-r--r-- 2 boinc boinc    592417 Jan 13 18:04 input.tar.gz
[2026-01-13 22:04:06] -rw-r--r-- 2 boinc boinc     15847 Jan 13 18:04 start_atlas.sh
[2026-01-13 22:04:06] -rw-r--r-- 1 boinc boinc         0 Jan 13 18:04 boinc_lockfile
[2026-01-13 22:04:06] -rw-r--r-- 1 boinc boinc      2642 Jan 13 18:04 pandaJob.out
[2026-01-13 22:04:06] -rw------- 1 boinc boinc    996105 Jan 13 18:04 agis_schedconf.cvmfs.json
[2026-01-13 22:04:06] drwx------ 5 boinc boinc      4096 Jan 13 18:04 pilot3
[2026-01-13 22:04:06] -rw------- 1 boinc boinc 288082680 Jan 13 21:52 HITS.48188528._000218.pool.root.1
[2026-01-13 22:04:06] -rw-r--r-- 1 boinc boinc       528 Jan 13 21:52 boinc_task_state.xml
[2026-01-13 22:04:06] -rw------- 1 boinc boinc        95 Jan 13 21:52 pilot_heartbeat.json
[2026-01-13 22:04:06] -rw------- 1 boinc boinc      1031 Jan 13 21:52 memory_monitor_summary.json
[2026-01-13 22:04:06] -rw------- 1 boinc boinc   1516246 Jan 13 21:52 agis_ddmendpoints.agis.ALL.json
[2026-01-13 22:04:06] -rw------- 1 boinc boinc    451236 Jan 13 21:52 log.48188528._000218.job.log.tgz.1
[2026-01-13 22:04:06] -rw------- 1 boinc boinc      7814 Jan 13 21:53 heartbeat.json
[2026-01-13 22:04:06] -rw------- 1 boinc boinc      4905 Jan 13 21:54 pilotlog.txt
[2026-01-13 22:04:06] -rw------- 1 boinc boinc   1952943 Jan 13 21:54 log.48188528._000218.job.log.1
[2026-01-13 22:04:06] -rw------- 1 boinc boinc       357 Jan 13 21:54 output.list
[2026-01-13 22:04:06] -rw-r--r-- 1 boinc boinc       620 Jan 13 21:54 runtime_log
[2026-01-13 22:04:06] -rw------- 1 boinc boinc   2426880 Jan 13 21:54 result.tar.gz
[2026-01-13 22:04:06] -rw-r--r-- 1 boinc boinc      9206 Jan 13 21:54 runtime_log.err
[2026-01-13 22:04:06] -rw------- 1 boinc boinc       664 Jan 13 21:54 RxzLDmwHsz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmC1nKDmU3hMKo.diag
[2026-01-13 22:04:06] -rw-r--r-- 1 boinc boinc        27 Jan 13 22:03 wrapper_checkpoint.txt
[2026-01-13 22:04:06] -rw-r--r-- 1 boinc boinc      8192 Jan 13 22:04 boinc_mmap_file
[2026-01-13 22:04:06] -rw-r--r-- 1 boinc boinc     20775 Jan 13 22:04 stderr.txt
[2026-01-13 22:04:06] HITS file was successfully produced:
[2026-01-13 22:04:06] -rw------- 1 boinc boinc 288082680 Jan 13 21:52 shared/HITS.pool.root.1
[2026-01-13 22:04:06]  *** Contents of shared directory: ***
[2026-01-13 22:04:06] total 594380
[2026-01-13 22:04:06] -rw-r--r-- 2 boinc boinc 317512348 Jan 13 18:04 ATLAS.root_0
[2026-01-13 22:04:06] -rw-r--r-- 2 boinc boinc    592417 Jan 13 18:04 input.tar.gz
[2026-01-13 22:04:06] -rw-r--r-- 2 boinc boinc     15847 Jan 13 18:04 start_atlas.sh
[2026-01-13 22:04:06] -rw------- 1 boinc boinc 288082680 Jan 13 21:52 HITS.pool.root.1
[2026-01-13 22:04:06] -rw------- 1 boinc boinc   2426880 Jan 13 21:54 result.tar.gz
22:04:08 (2421904): run_atlas exited; CPU time 53718.485832
22:04:08 (2421904): called boinc_finish(0)

</stderr_txt>
]]>

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