Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:04:53 (9508): wrapper (7.7.26015): starting
07:04:53 (9508): wrapper: running run_atlas (--nthreads 8)
[2026-01-13 07:04:53] Arguments: --nthreads 8
[2026-01-13 07:04:53] Threads: 8
[2026-01-13 07:04:53] Checking for CVMFS
[2026-01-13 07:04:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 07:04:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 07:04:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 07:04:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 07:04:53] 2.11.2.0 21766 186795 132120 155087 0 13 17710765 18432001 69 130560 0 125345539 99.980 7145535 29833 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-13 07:04:53] CVMFS is ok
[2026-01-13 07:04:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 07:04:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 07:04:53] Further information can be found at the LHC@home message board.
[2026-01-13 07:04:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 07:04:53] Checking for apptainer binary...
[2026-01-13 07:04:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 07:04:53] Running /usr/bin/apptainer --version
[2026-01-13 07:04:53] apptainer version 1.3.2-1.el7
[2026-01-13 07:04:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 07:04:54] c-206-18.aglt2.org
[2026-01-13 07:04:54] apptainer works
[2026-01-13 07:04:54] Set ATHENA_PROC_NUMBER=8
[2026-01-13 07:04:54] Set ATHENA_CORE_NUMBER=8
[2026-01-13 07:04:54] Starting ATLAS job with PandaID=6968661576
[2026-01-13 07:04:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 11:40:39]  *** The last 200 lines of the pilot log: ***
[2026-01-13 11:40:39] 2026-01-13 16:39:57,338 | INFO     | mean y: 2542542.716981132
[2026-01-13 11:40:39] 2026-01-13 16:39:57,338 | INFO     | intersect: -7901405945.139027
[2026-01-13 11:40:39] 2026-01-13 16:39:57,338 | INFO     | chi2: 0.032767795956319394
[2026-01-13 11:40:39] 2026-01-13 16:39:57,338 | INFO     | current chi2=0.032767795956319394 (change=97.46457527467054 %)
[2026-01-13 11:40:39] 2026-01-13 16:39:57,339 | INFO     | sum of square deviations: 5449944045.0
[2026-01-13 11:40:39] 2026-01-13 16:39:57,340 | INFO     | sum of deviations: 19230257746.999996
[2026-01-13 11:40:39] 2026-01-13 16:39:57,341 | INFO     | mean x: 1768314440.5
[2026-01-13 11:40:39] 2026-01-13 16:39:57,341 | INFO     | mean y: 2545638.3076923075
[2026-01-13 11:40:39] 2026-01-13 16:39:57,341 | INFO     | intersect: -6236994105.179176
[2026-01-13 11:40:39] 2026-01-13 16:39:57,341 | INFO     | chi2: 0.0033759669821472023
[2026-01-13 11:40:39] 2026-01-13 16:39:57,341 | INFO     | current chi2=0.0033759669821472023 (change=89.69730223342613 %)
[2026-01-13 11:40:39] 2026-01-13 16:39:57,341 | INFO     | sum of square deviations: 5141528960.0
[2026-01-13 11:40:39] 2026-01-13 16:39:57,343 | INFO     | sum of deviations: 17400824253.999996
[2026-01-13 11:40:39] 2026-01-13 16:39:57,343 | INFO     | mean x: 1768314593.0
[2026-01-13 11:40:39] 2026-01-13 16:39:57,343 | INFO     | mean y: 2546549.7294117645
[2026-01-13 11:40:39] 2026-01-13 16:39:57,343 | INFO     | intersect: -5982080143.606675
[2026-01-13 11:40:39] 2026-01-13 16:39:57,344 | INFO     | chi2: 0.001621856969277931
[2026-01-13 11:40:39] 2026-01-13 16:39:57,344 | INFO     | current chi2=0.001621856969277931 (change=51.95874314367885 %)
[2026-01-13 11:40:39] 2026-01-13 16:39:57,344 | INFO     | sum of square deviations: 4844974562.5
[2026-01-13 11:40:39] 2026-01-13 16:39:57,345 | INFO     | sum of deviations: 15508708503.000006
[2026-01-13 11:40:39] 2026-01-13 16:39:57,345 | INFO     | mean x: 1768314745.5
[2026-01-13 11:40:39] 2026-01-13 16:39:57,346 | INFO     | mean y: 2547521.368
[2026-01-13 11:40:39] 2026-01-13 16:39:57,346 | INFO     | intersect: -5657807879.004888
[2026-01-13 11:40:39] 2026-01-13 16:39:57,346 | INFO     | chi2: 0.0011392747448069399
[2026-01-13 11:40:39] 2026-01-13 16:39:57,346 | INFO     | current chi2=0.0011392747448069399 (change=29.75491881296056 %)
[2026-01-13 11:40:39] 2026-01-13 16:39:57,347 | INFO     | sum of square deviations: 4560048290.0
[2026-01-13 11:40:39] 2026-01-13 16:39:57,348 | INFO     | sum of deviations: 14012619392.000006
[2026-01-13 11:40:39] 2026-01-13 16:39:57,348 | INFO     | mean x: 1768314898.0
[2026-01-13 11:40:39] 2026-01-13 16:39:57,348 | INFO     | mean y: 2548322.0081632654
[2026-01-13 11:40:39] 2026-01-13 16:39:57,348 | INFO     | intersect: -5431324754.559039
[2026-01-13 11:40:39] 2026-01-13 16:39:57,348 | INFO     | chi2: 0.0009398195973066558
[2026-01-13 11:40:39] 2026-01-13 16:39:57,349 | INFO     | current chi2=0.0009398195973066558 (change=17.50720345636061 %)
[2026-01-13 11:40:39] 2026-01-13 16:39:57,349 | INFO     | left removable region: 50
[2026-01-13 11:40:39] 2026-01-13 16:39:57,349 | INFO     | sum of square deviations: 3038856977.5
[2026-01-13 11:40:39] 2026-01-13 16:39:57,350 | INFO     | sum of deviations: 7939920216.499999
[2026-01-13 11:40:39] 2026-01-13 16:39:57,350 | INFO     | mean x: 1768315477.5
[2026-01-13 11:40:39] 2026-01-13 16:39:57,351 | INFO     | mean y: 2551116.0327102803
[2026-01-13 11:40:39] 2026-01-13 16:39:57,351 | INFO     | intersect: -4617700482.811118
[2026-01-13 11:40:39] 2026-01-13 16:39:57,351 | INFO     | chi2: 0.0004952793688517024
[2026-01-13 11:40:39] 2026-01-13 16:39:57,351 | INFO     | current memory leak: 2.61 B/s (using 214 data points, chi2=0.00)
[2026-01-13 11:40:39] 2026-01-13 16:39:57,351 | INFO     | could have reported an average CPU frequency of 2369 MHz (12 samples)
[2026-01-13 11:40:39] 2026-01-13 16:39:57,352 | INFO     | ..............................
[2026-01-13 11:40:39] 2026-01-13 16:39:57,352 | INFO     | . Timing measurements:
[2026-01-13 11:40:39] 2026-01-13 16:39:57,352 | INFO     | . get job = 0 s
[2026-01-13 11:40:39] 2026-01-13 16:39:57,352 | INFO     | . initial setup = 2 s
[2026-01-13 11:40:39] 2026-01-13 16:39:57,352 | INFO     | . payload setup = 5 s
[2026-01-13 11:40:39] 2026-01-13 16:39:57,352 | INFO     | . stage-in = 0 s
[2026-01-13 11:40:39] 2026-01-13 16:39:57,352 | INFO     | . payload execution = 16463 s
[2026-01-13 11:40:39] 2026-01-13 16:39:57,352 | INFO     | . stage-out = 2 s
[2026-01-13 11:40:39] 2026-01-13 16:39:57,352 | INFO     | . log creation = 0 s
[2026-01-13 11:40:39] 2026-01-13 16:39:57,353 | INFO     | ..............................
[2026-01-13 11:40:39] 2026-01-13 16:39:57,433 | INFO     | 
[2026-01-13 11:40:39] 2026-01-13 16:39:57,433 | INFO     | job summary report
[2026-01-13 11:40:39] 2026-01-13 16:39:57,433 | INFO     | --------------------------------------------------
[2026-01-13 11:40:39] 2026-01-13 16:39:57,433 | INFO     | PanDA job id: 6968661576
[2026-01-13 11:40:39] 2026-01-13 16:39:57,433 | INFO     | task id: 48188528
[2026-01-13 11:40:39] 2026-01-13 16:39:57,434 | INFO     | errors: (none)
[2026-01-13 11:40:39] 2026-01-13 16:39:57,434 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 11:40:39] 2026-01-13 16:39:57,434 | INFO     | pilot state: finished 
[2026-01-13 11:40:39] 2026-01-13 16:39:57,434 | INFO     | transexitcode: 0
[2026-01-13 11:40:39] 2026-01-13 16:39:57,434 | INFO     | exeerrorcode: 0
[2026-01-13 11:40:39] 2026-01-13 16:39:57,434 | INFO     | exeerrordiag: 
[2026-01-13 11:40:39] 2026-01-13 16:39:57,434 | INFO     | exitcode: 0
[2026-01-13 11:40:39] 2026-01-13 16:39:57,434 | INFO     | exitmsg: OK
[2026-01-13 11:40:39] 2026-01-13 16:39:57,434 | INFO     | cpuconsumptiontime: 126034 s
[2026-01-13 11:40:39] 2026-01-13 16:39:57,435 | INFO     | nevents: 400
[2026-01-13 11:40:39] 2026-01-13 16:39:57,435 | INFO     | neventsw: 0
[2026-01-13 11:40:39] 2026-01-13 16:39:57,435 | INFO     | pid: 13505
[2026-01-13 11:40:39] 2026-01-13 16:39:57,435 | INFO     | pgrp: 13505
[2026-01-13 11:40:39] 2026-01-13 16:39:57,435 | INFO     | corecount: 8
[2026-01-13 11:40:39] 2026-01-13 16:39:57,435 | INFO     | event service: False
[2026-01-13 11:40:39] 2026-01-13 16:39:57,435 | INFO     | sizes: {0: 2283907, 1: 2284162, 6: 2284424, 12: 2284452, 16469: 2315958, 16471: 2325140, 16476: 2325278}
[2026-01-13 11:40:39] 2026-01-13 16:39:57,435 | INFO     | --------------------------------------------------
[2026-01-13 11:40:39] 2026-01-13 16:39:57,435 | INFO     | 
[2026-01-13 11:40:39] 2026-01-13 16:39:57,436 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-13 11:40:39] 2026-01-13 16:39:57,453 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 11:40:39] 2026-01-13 16:39:57,453 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 11:40:39] 2026-01-13 16:39:57,453 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 11:40:39] 2026-01-13 16:39:57,453 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 11:40:39] 2026-01-13 16:39:57,453 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 11:40:39] 2026-01-13 16:39:57,453 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 11:40:39] 2026-01-13 16:39:57,453 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 11:40:39] 2026-01-13 16:39:57,454 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 11:40:39] 2026-01-13 16:39:57,454 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 11:40:39] 2026-01-13 16:39:57,454 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 11:40:39] 2026-01-13 16:39:57,454 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 11:40:39] 2026-01-13 16:39:57,454 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 11:40:39] 2026-01-13 16:39:57,454 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 11:40:39] 2026-01-13 16:39:57,454 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 11:40:39] 2026-01-13 16:39:57,454 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 11:40:39] 2026-01-13 16:39:57,454 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 11:40:39] 2026-01-13 16:39:57,455 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 11:40:39] 2026-01-13 16:39:57,455 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 11:40:39] 2026-01-13 16:39:57,455 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 11:40:39] 2026-01-13 16:39:57,455 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 11:40:39] 2026-01-13 16:39:57,455 | INFO     | job 6968661576 has completed (purged errors)
[2026-01-13 11:40:39] 2026-01-13 16:39:57,455 | INFO     | overall cleanup function is called
[2026-01-13 11:40:39] 2026-01-13 16:39:58,463 | INFO     | --- collectZombieJob: --- 10, [13505]
[2026-01-13 11:40:39] 2026-01-13 16:39:58,463 | INFO     | zombie collector waiting for pid 13505
[2026-01-13 11:40:39] 2026-01-13 16:39:58,463 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 11:40:39] 2026-01-13 16:39:58,463 | INFO     | collected zombie processes
[2026-01-13 11:40:39] 2026-01-13 16:39:58,463 | INFO     | will attempt to kill all subprocesses of pid=13505
[2026-01-13 11:40:39] 2026-01-13 16:39:58,567 | INFO     | process IDs to be killed: [13505] (in reverse order)
[2026-01-13 11:40:39] 2026-01-13 16:39:58,616 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 11:40:39] 2026-01-13 16:39:58,617 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 11:40:39] 2026-01-13 16:39:58,619 | INFO     | did not find any defunct processes belonging to 13505
[2026-01-13 11:40:39] 2026-01-13 16:39:58,622 | INFO     | did not find any defunct processes belonging to 13505
[2026-01-13 11:40:39] 2026-01-13 16:39:58,622 | INFO     | ready for new job
[2026-01-13 11:40:39] 2026-01-13 16:39:58,622 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 11:40:39] 2026-01-13 16:39:58,624 | INFO     | ***************************************
[2026-01-13 11:40:39] 2026-01-13 16:39:58,624 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 11:40:39] 2026-01-13 16:39:58,624 | INFO     | ***************************************
[2026-01-13 11:40:39] 2026-01-13 16:39:58,624 | INFO     | 
[2026-01-13 11:40:39] 2026-01-13 16:39:58,625 | INFO     | architecture information:
[2026-01-13 11:40:39] 2026-01-13 16:39:58,626 | INFO     | executing command: cat /etc/os-release
[2026-01-13 11:40:39] 2026-01-13 16:39:58,639 | INFO     | cat /etc/os-release:
[2026-01-13 11:40:39] NAME="CentOS Linux"
[2026-01-13 11:40:39] VERSION="7 (Core)"
[2026-01-13 11:40:39] ID="centos"
[2026-01-13 11:40:39] ID_LIKE="rhel fedora"
[2026-01-13 11:40:39] VERSION_ID="7"
[2026-01-13 11:40:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 11:40:39] ANSI_COLOR="0;31"
[2026-01-13 11:40:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 11:40:39] HOME_URL="https://www.centos.org/"
[2026-01-13 11:40:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 11:40:39] 
[2026-01-13 11:40:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 11:40:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 11:40:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 11:40:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 11:40:39] 
[2026-01-13 11:40:39] 2026-01-13 16:39:58,640 | INFO     | ***************************************
[2026-01-13 11:40:39] 2026-01-13 16:39:59,143 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-13 11:40:39] 2026-01-13 16:39:59,158 | INFO     | sufficient remaining disk space (28219277312 B)
[2026-01-13 11:40:39] 2026-01-13 16:39:59,158 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 11:40:39] 2026-01-13 16:39:59,159 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 11:40:39] 2026-01-13 16:39:59,159 | INFO     | update_server=False
[2026-01-13 11:40:39] 2026-01-13 16:39:59,159 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 11:40:39] 2026-01-13 16:39:59,159 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 11:40:39] 2026-01-13 16:39:59,159 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 11:40:39] 2026-01-13 16:39:59,243 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 11:40:39] 2026-01-13 16:39:59,577 | INFO     | all payload control threads have been joined
[2026-01-13 11:40:39] 2026-01-13 16:39:59,804 | INFO     | all data control threads have been joined
[2026-01-13 11:40:39] 2026-01-13 16:40:00,036 | INFO     | job.realtimelogging is not enabled
[2026-01-13 11:40:39] 2026-01-13 16:40:00,161 | INFO     | [job] queue monitor thread has finished
[2026-01-13 11:40:39] 2026-01-13 16:40:00,164 | INFO     | [job] retrieve thread has finished
[2026-01-13 11:40:39] 2026-01-13 16:40:00,315 | WARNING  | process 13505 can no longer be monitored (due to stat problems) - aborting
[2026-01-13 11:40:39] 2026-01-13 16:40:00,398 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 11:40:39] 2026-01-13 16:40:00,399 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 11:40:39] 2026-01-13 16:40:00,399 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-13 11:40:39] 2026-01-13 16:40:00,399 | WARNING  | maxPSS not found in memory monitor output
[2026-01-13 11:40:39] 2026-01-13 16:40:00,400 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/2/PanDA_Pilot-6968661576/payload.stdout) since it has not been created yet
[2026-01-13 11:40:39] 2026-01-13 16:40:00,400 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-13 11:40:39] 2026-01-13 16:40:00,416 | INFO     | sufficient remaining disk space (28219277312 B)
[2026-01-13 11:40:39] 2026-01-13 16:40:00,416 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-13 11:40:39] 2026-01-13 16:40:00,417 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-6968661576/HITS.48188528._000087.pool.root.1 since it does not exist
[2026-01-13 11:40:39] 2026-01-13 16:40:00,524 | INFO     | number of running child processes to parent process 13505: 1
[2026-01-13 11:40:39] 2026-01-13 16:40:00,524 | INFO     | maximum number of monitored processes: 6
[2026-01-13 11:40:39] 2026-01-13 16:40:00,525 | INFO     | aborting job monitoring since job object (job id=6968661576) has expired
[2026-01-13 11:40:39] 2026-01-13 16:40:00,525 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 11:40:39] 2026-01-13 16:40:00,525 | INFO     | will abort loop
[2026-01-13 11:40:39] 2026-01-13 16:40:00,583 | INFO     | [payload] control thread has finished
[2026-01-13 11:40:39] 2026-01-13 16:40:00,621 | INFO     | all job control threads have been joined
[2026-01-13 11:40:39] 2026-01-13 16:40:00,628 | INFO     | [job] validate thread has finished
[2026-01-13 11:40:39] 2026-01-13 16:40:00,650 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 11:40:39] 2026-01-13 16:40:00,811 | INFO     | [data] control thread has finished
[2026-01-13 11:40:39] 2026-01-13 16:40:00,903 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 11:40:39] 2026-01-13 16:40:00,957 | INFO     | [payload] failed_post thread has finished
[2026-01-13 11:40:39] 2026-01-13 16:40:01,041 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 11:40:39] 2026-01-13 16:40:01,165 | INFO     | [data] copytool_out thread has finished
[2026-01-13 11:40:39] 2026-01-13 16:40:01,303 | INFO     | [data] copytool_in thread has finished
[2026-01-13 11:40:39] 2026-01-13 16:40:01,362 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 11:40:39] 2026-01-13 16:40:01,530 | INFO     | [job] job monitor thread has finished
[2026-01-13 11:40:39] 2026-01-13 16:40:01,586 | INFO     | [payload] validate_post thread has finished
[2026-01-13 11:40:39] 2026-01-13 16:40:01,626 | INFO     | [job] control thread has finished
[2026-01-13 11:40:39] 2026-01-13 16:40:03,249 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 11:40:39] 2026-01-13 16:40:29,451 | INFO     | PID=18664 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-13 11:40:39] 2026-01-13 16:40:29,451 | INFO     | .. there are 2 such processes running
[2026-01-13 11:40:39] 2026-01-13 16:40:29,452 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 11:40:39] 2026-01-13 16:40:29,452 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 11:40:39] 2026-01-13 16:40:29,452 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 11:40:39] 2026-01-13 16:40:32,897 | INFO     | [monitor] cgroup control has ended
[2026-01-13 11:40:39] 2026-01-13 16:40:33,848 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140424743712576)>', '<ExcThread(monitor, started 140424073172736)>']
[2026-01-13 11:40:39] 2026-01-13 16:40:34,478 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 11:40:39] 2026-01-13 16:40:34,478 | INFO     | [monitor] control thread has ended
[2026-01-13 11:40:39] 2026-01-13 16:40:38,850 | INFO     | all workflow threads have been joined
[2026-01-13 11:40:39] 2026-01-13 16:40:38,850 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 11:40:39] 2026-01-13 16:40:38,850 | INFO     | traces error code: 0
[2026-01-13 11:40:39] 2026-01-13 16:40:38,851 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 11:40:39] 2026-01-13 16:40:38,941 [wrapper] ==== pilot stdout END ====
[2026-01-13 11:40:39] 2026-01-13 16:40:38,945 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 11:40:39] 2026-01-13 16:40:38,949 [wrapper] pilotpid: 18664
[2026-01-13 11:40:39] 2026-01-13 16:40:38,952 [wrapper] Pilot exit status: 0
[2026-01-13 11:40:39] 2026-01-13 16:40:38,962 [wrapper] pandaids: 6968661576
[2026-01-13 11:40:39] 2026-01-13 16:40:38,996 [wrapper] cleanup supervisor_pilot 11745 18665
[2026-01-13 11:40:39] 2026-01-13 16:40:38,999 [wrapper] Test setup, not cleaning
[2026-01-13 11:40:39] 2026-01-13 16:40:39,003 [wrapper] apfmon messages muted
[2026-01-13 11:40:39] 2026-01-13 16:40:39,006 [wrapper] ==== wrapper stdout END ====
[2026-01-13 11:40:39] 2026-01-13 16:40:39,010 [wrapper] ==== wrapper stderr END ====
[2026-01-13 11:40:39]  *** Error codes and diagnostics ***
[2026-01-13 11:40:39]     "exeErrorCode": 0,
[2026-01-13 11:40:39]     "exeErrorDiag": "",
[2026-01-13 11:40:39]     "pilotErrorCode": 0,
[2026-01-13 11:40:39]     "pilotErrorDiag": "",
[2026-01-13 11:40:39]  *** Listing of results directory ***
[2026-01-13 11:40:39] total 603208
[2026-01-13 11:40:39] -rw-r--r-- 1 boincer umatlas    579449 Jan 13 06:09 pilot3.tar.gz
[2026-01-13 11:40:39] -rw-r--r-- 1 boincer umatlas      5112 Jan 13 07:02 queuedata.json
[2026-01-13 11:40:39] -rwx------ 1 boincer umatlas     36322 Jan 13 07:02 runpilot2-wrapper.sh
[2026-01-13 11:40:39] -rw-r--r-- 1 boincer umatlas       100 Jan 13 07:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 11:40:39] -rwxr-xr-x 1 boincer umatlas      7986 Jan 13 07:04 run_atlas
[2026-01-13 11:40:39] -rw-r--r-- 1 boincer umatlas       105 Jan 13 07:04 job.xml
[2026-01-13 11:40:39] -rw-r--r-- 2 boincer umatlas 320001667 Jan 13 07:04 EVNT.48188524._000004.pool.root.1
[2026-01-13 11:40:39] -rw-r--r-- 2 boincer umatlas     15847 Jan 13 07:04 start_atlas.sh
[2026-01-13 11:40:39] drwxrwx--x 2 boincer umatlas      4096 Jan 13 07:04 shared
[2026-01-13 11:40:39] -rw-r--r-- 2 boincer umatlas    592414 Jan 13 07:04 input.tar.gz
[2026-01-13 11:40:39] -rw-r--r-- 1 boincer umatlas         0 Jan 13 07:04 boinc_lockfile
[2026-01-13 11:40:39] -rw-r--r-- 1 boincer umatlas      2640 Jan 13 07:04 pandaJob.out
[2026-01-13 11:40:39] -rw------- 1 boincer umatlas        57 Jan 13 07:04 setup.sh.local
[2026-01-13 11:40:39] -rw------- 1 boincer umatlas    992677 Jan 13 07:05 agis_schedconf.cvmfs.json
[2026-01-13 11:40:39] drwx------ 5 boincer umatlas      4096 Jan 13 07:05 pilot3
[2026-01-13 11:40:39] -rw-r--r-- 1 boincer umatlas      5953 Jan 13 11:38 init_data.xml
[2026-01-13 11:40:39] -rw------- 1 boincer umatlas 288101279 Jan 13 11:39 HITS.48188528._000087.pool.root.1
[2026-01-13 11:40:39] -rw-r--r-- 1 boincer umatlas       531 Jan 13 11:39 boinc_task_state.xml
[2026-01-13 11:40:39] -rw------- 1 boincer umatlas      1064 Jan 13 11:39 memory_monitor_summary.json
[2026-01-13 11:40:39] -rw------- 1 boincer umatlas   1516246 Jan 13 11:39 agis_ddmendpoints.agis.ALL.json
[2026-01-13 11:40:39] -rw------- 1 boincer umatlas    539215 Jan 13 11:39 log.48188528._000087.job.log.tgz.1
[2026-01-13 11:40:39] -rw------- 1 boincer umatlas      7844 Jan 13 11:39 heartbeat.json
[2026-01-13 11:40:39] -rw-r--r-- 1 boincer umatlas      8192 Jan 13 11:40 boinc_mmap_file
[2026-01-13 11:40:39] -rw-r--r-- 1 boincer umatlas        29 Jan 13 11:40 wrapper_checkpoint.txt
[2026-01-13 11:40:39] -rw------- 1 boincer umatlas        95 Jan 13 11:40 pilot_heartbeat.json
[2026-01-13 11:40:39] -rw------- 1 boincer umatlas      6374 Jan 13 11:40 pilotlog.txt
[2026-01-13 11:40:39] -rw------- 1 boincer umatlas   2292617 Jan 13 11:40 log.48188528._000087.job.log.1
[2026-01-13 11:40:39] -rw------- 1 boincer umatlas       357 Jan 13 11:40 output.list
[2026-01-13 11:40:39] -rw-r--r-- 1 boincer umatlas       620 Jan 13 11:40 runtime_log
[2026-01-13 11:40:39] -rw------- 1 boincer umatlas   2846720 Jan 13 11:40 result.tar.gz
[2026-01-13 11:40:39] -rw------- 1 boincer umatlas       662 Jan 13 11:40 SorNDmvHsz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmL0nKDmpsQPJo.diag
[2026-01-13 11:40:39] -rw-r--r-- 1 boincer umatlas      9343 Jan 13 11:40 runtime_log.err
[2026-01-13 11:40:39] -rw-r--r-- 1 boincer umatlas     21481 Jan 13 11:40 stderr.txt
[2026-01-13 11:40:39] HITS file was successfully produced:
[2026-01-13 11:40:39] -rw------- 1 boincer umatlas 288101279 Jan 13 11:39 shared/HITS.pool.root.1
[2026-01-13 11:40:39]  *** Contents of shared directory: ***
[2026-01-13 11:40:39] total 597240
[2026-01-13 11:40:39] -rw-r--r-- 2 boincer umatlas 320001667 Jan 13 07:04 ATLAS.root_0
[2026-01-13 11:40:39] -rw-r--r-- 2 boincer umatlas     15847 Jan 13 07:04 start_atlas.sh
[2026-01-13 11:40:39] -rw-r--r-- 2 boincer umatlas    592414 Jan 13 07:04 input.tar.gz
[2026-01-13 11:40:39] -rw------- 1 boincer umatlas 288101279 Jan 13 11:39 HITS.pool.root.1
[2026-01-13 11:40:39] -rw------- 1 boincer umatlas   2846720 Jan 13 11:40 result.tar.gz
11:40:40 (9508): run_atlas exited; CPU time 126271.502286
11:40:40 (9508): called boinc_finish(0)

</stderr_txt>
]]>

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