Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:56:17 (4165876): wrapper (7.7.26015): starting
09:56:17 (4165876): wrapper: running run_atlas (--nthreads 8)
[2026-01-13 09:56:18] Arguments: --nthreads 8
[2026-01-13 09:56:18] Threads: 8
[2026-01-13 09:56:18] Checking for CVMFS
[2026-01-13 09:56:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 09:56:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 09:56:18] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 09:56:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 09:56:19] 2.13.3.0 7038 28785 171216 155091 3 467 32096711 40960000 22726 16776704 0 47131116 99.753 31780982 45105 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-13 09:56:19] CVMFS is ok
[2026-01-13 09:56:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 09:56:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 09:56:19] Further information can be found at the LHC@home message board.
[2026-01-13 09:56:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 09:56:19] Checking for apptainer binary...
[2026-01-13 09:56:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 09:56:19] Running /usr/bin/apptainer --version
[2026-01-13 09:56:19] apptainer version 1.4.5-2.el9
[2026-01-13 09:56:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 09:56:20] c-212-4.aglt2.org
[2026-01-13 09:56:20] apptainer works
[2026-01-13 09:56:20] Set ATHENA_PROC_NUMBER=8
[2026-01-13 09:56:20] Set ATHENA_CORE_NUMBER=8
[2026-01-13 09:56:20] Starting ATLAS job with PandaID=6968661495
[2026-01-13 09:56:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 12:00:24]  *** The last 200 lines of the pilot log: ***
[2026-01-13 12:00:24] 2026-01-13 16:59:46,534 | INFO     | log transfer has been attempted: DONE
[2026-01-13 12:00:24] 2026-01-13 16:59:46,535 | INFO     | job 6968661495 has finished - writing final server update
[2026-01-13 12:00:24] 2026-01-13 16:59:46,535 | INFO     | total number of processed events: 400 (read)
[2026-01-13 12:00:24] 2026-01-13 16:59:46,536 | INFO     | executing command: lscpu
[2026-01-13 12:00:24] 2026-01-13 16:59:46,596 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 12:00:24] 2026-01-13 16:59:48,474 | INFO     | time since job start (7363s) is within the limit (349056.0s)
[2026-01-13 12:00:24] 2026-01-13 16:59:48,833 | INFO     | monitor loop #535: job 0:6968661495 is in state 'finished'
[2026-01-13 12:00:24] 2026-01-13 16:59:48,833 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 12:00:24] 2026-01-13 16:59:50,323 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 12:00:24] 2026-01-13 16:59:50,328 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3272.6699583333334
[2026-01-13 12:00:24] 2026-01-13 16:59:50,342 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6968661495/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 12:00:24] 2026-01-13 16:59:50,343 | INFO     | extracted standard info from prmon json
[2026-01-13 12:00:24] 2026-01-13 16:59:50,343 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 12:00:24] 2026-01-13 16:59:50,343 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 12:00:24] 2026-01-13 16:59:50,343 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 12:00:24] 2026-01-13 16:59:50,344 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 12:00:24] 2026-01-13 16:59:50,346 | INFO     | fitting pss+swap vs Time
[2026-01-13 12:00:24] 2026-01-13 16:59:50,346 | INFO     | sum of square deviations: 535786790.0
[2026-01-13 12:00:24] 2026-01-13 16:59:50,346 | INFO     | sum of deviations: 24771783349.0
[2026-01-13 12:00:24] 2026-01-13 16:59:50,347 | INFO     | mean x: 1768319946.5
[2026-01-13 12:00:24] 2026-01-13 16:59:50,347 | INFO     | mean y: 2512457.1666666665
[2026-01-13 12:00:24] 2026-01-13 16:59:50,347 | INFO     | intersect: -81754707810.27081
[2026-01-13 12:00:24] 2026-01-13 16:59:50,347 | INFO     | chi2: 3.061114006967026
[2026-01-13 12:00:24] 2026-01-13 16:59:50,347 | INFO     | sum of square deviations: 471562330.0
[2026-01-13 12:00:24] 2026-01-13 16:59:50,348 | INFO     | sum of deviations: 31469943493.0
[2026-01-13 12:00:24] 2026-01-13 16:59:50,348 | INFO     | mean x: 1768319794.0
[2026-01-13 12:00:24] 2026-01-13 16:59:50,348 | INFO     | mean y: 2527701.486956522
[2026-01-13 12:00:24] 2026-01-13 16:59:50,348 | INFO     | intersect: -118007161483.68059
[2026-01-13 12:00:24] 2026-01-13 16:59:50,348 | INFO     | chi2: 2.3118014184665006
[2026-01-13 12:00:24] 2026-01-13 16:59:50,348 | INFO     | current chi2=2.3118014184665006 (change=24.478428010035135 %)
[2026-01-13 12:00:24] 2026-01-13 16:59:50,348 | INFO     | right removable region: 114
[2026-01-13 12:00:24] 2026-01-13 16:59:50,348 | INFO     | sum of square deviations: 471562330.0
[2026-01-13 12:00:24] 2026-01-13 16:59:50,349 | INFO     | sum of deviations: -2237826785.000002
[2026-01-13 12:00:24] 2026-01-13 16:59:50,349 | INFO     | mean x: 1768320099.0
[2026-01-13 12:00:24] 2026-01-13 16:59:50,349 | INFO     | mean y: 2575885.7130434783
[2026-01-13 12:00:24] 2026-01-13 16:59:50,349 | INFO     | intersect: 8394242968.187708
[2026-01-13 12:00:24] 2026-01-13 16:59:50,349 | INFO     | chi2: 0.8553486602595756
[2026-01-13 12:00:24] 2026-01-13 16:59:50,349 | INFO     | current chi2=0.8553486602595756 (change=72.05760196082794 %)
[2026-01-13 12:00:24] 2026-01-13 16:59:50,349 | INFO     | sum of square deviations: 412686807.5
[2026-01-13 12:00:24] 2026-01-13 16:59:50,350 | INFO     | sum of deviations: -3913290208.5
[2026-01-13 12:00:24] 2026-01-13 16:59:50,350 | INFO     | mean x: 1768320251.5
[2026-01-13 12:00:24] 2026-01-13 16:59:50,350 | INFO     | mean y: 2580001.9909090907
[2026-01-13 12:00:24] 2026-01-13 16:59:50,350 | INFO     | intersect: 16770623467.2214
[2026-01-13 12:00:24] 2026-01-13 16:59:50,350 | INFO     | chi2: 0.8178934482800098
[2026-01-13 12:00:24] 2026-01-13 16:59:50,350 | INFO     | current chi2=0.8178934482800098 (change=4.37894085999961 %)
[2026-01-13 12:00:24] 2026-01-13 16:59:50,350 | INFO     | left removable region: 20
[2026-01-13 12:00:24] 2026-01-13 16:59:50,351 | INFO     | sum of square deviations: 257521107.5
[2026-01-13 12:00:24] 2026-01-13 16:59:50,351 | INFO     | sum of deviations: 3213201138.5000005
[2026-01-13 12:00:24] 2026-01-13 16:59:50,351 | INFO     | mean x: 1768320373.5
[2026-01-13 12:00:24] 2026-01-13 16:59:50,351 | INFO     | mean y: 2600510.074468085
[2026-01-13 12:00:24] 2026-01-13 16:59:50,351 | INFO     | intersect: -22061490051.367943
[2026-01-13 12:00:24] 2026-01-13 16:59:50,351 | INFO     | chi2: 0.0013431402267486516
[2026-01-13 12:00:24] 2026-01-13 16:59:50,351 | INFO     | current memory leak: 12.48 B/s (using 94 data points, chi2=0.00)
[2026-01-13 12:00:24] 2026-01-13 16:59:50,352 | INFO     | could have reported an average CPU frequency of 3266 MHz (8 samples)
[2026-01-13 12:00:24] 2026-01-13 16:59:50,352 | INFO     | ..............................
[2026-01-13 12:00:24] 2026-01-13 16:59:50,352 | INFO     | . Timing measurements:
[2026-01-13 12:00:24] 2026-01-13 16:59:50,352 | INFO     | . get job = 0 s
[2026-01-13 12:00:24] 2026-01-13 16:59:50,352 | INFO     | . initial setup = 6 s
[2026-01-13 12:00:24] 2026-01-13 16:59:50,352 | INFO     | . payload setup = 35 s
[2026-01-13 12:00:24] 2026-01-13 16:59:50,352 | INFO     | . stage-in = 0 s
[2026-01-13 12:00:24] 2026-01-13 16:59:50,352 | INFO     | . payload execution = 7282 s
[2026-01-13 12:00:24] 2026-01-13 16:59:50,352 | INFO     | . stage-out = 0 s
[2026-01-13 12:00:24] 2026-01-13 16:59:50,353 | INFO     | . log creation = 0 s
[2026-01-13 12:00:24] 2026-01-13 16:59:50,353 | INFO     | ..............................
[2026-01-13 12:00:24] 2026-01-13 16:59:50,480 | INFO     | time since job start (7365s) is within the limit (349056.0s)
[2026-01-13 12:00:24] 2026-01-13 16:59:50,722 | INFO     | 
[2026-01-13 12:00:24] 2026-01-13 16:59:50,722 | INFO     | job summary report
[2026-01-13 12:00:24] 2026-01-13 16:59:50,722 | INFO     | --------------------------------------------------
[2026-01-13 12:00:24] 2026-01-13 16:59:50,722 | INFO     | PanDA job id: 6968661495
[2026-01-13 12:00:24] 2026-01-13 16:59:50,722 | INFO     | task id: 48188528
[2026-01-13 12:00:24] 2026-01-13 16:59:50,722 | INFO     | errors: (none)
[2026-01-13 12:00:24] 2026-01-13 16:59:50,722 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 12:00:24] 2026-01-13 16:59:50,723 | INFO     | pilot state: finished 
[2026-01-13 12:00:24] 2026-01-13 16:59:50,723 | INFO     | transexitcode: 0
[2026-01-13 12:00:24] 2026-01-13 16:59:50,723 | INFO     | exeerrorcode: 0
[2026-01-13 12:00:24] 2026-01-13 16:59:50,723 | INFO     | exeerrordiag: 
[2026-01-13 12:00:24] 2026-01-13 16:59:50,723 | INFO     | exitcode: 0
[2026-01-13 12:00:24] 2026-01-13 16:59:50,723 | INFO     | exitmsg: OK
[2026-01-13 12:00:24] 2026-01-13 16:59:50,723 | INFO     | cpuconsumptiontime: 45359 s
[2026-01-13 12:00:24] 2026-01-13 16:59:50,723 | INFO     | nevents: 400
[2026-01-13 12:00:24] 2026-01-13 16:59:50,723 | INFO     | neventsw: 0
[2026-01-13 12:00:24] 2026-01-13 16:59:50,723 | INFO     | pid: 4178240
[2026-01-13 12:00:24] 2026-01-13 16:59:50,723 | INFO     | pgrp: 4178240
[2026-01-13 12:00:24] 2026-01-13 16:59:50,723 | INFO     | corecount: 8
[2026-01-13 12:00:24] 2026-01-13 16:59:50,723 | INFO     | event service: False
[2026-01-13 12:00:24] 2026-01-13 16:59:50,723 | INFO     | sizes: {0: 2284128, 1: 2284156, 12: 2284156, 19: 2284446, 22: 2284474, 7321: 2311882, 7323: 2320880, 7324: 2320936, 7331: 2321130}
[2026-01-13 12:00:24] 2026-01-13 16:59:50,723 | INFO     | --------------------------------------------------
[2026-01-13 12:00:24] 2026-01-13 16:59:50,723 | INFO     | 
[2026-01-13 12:00:24] 2026-01-13 16:59:50,723 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-13 12:00:24] 2026-01-13 16:59:50,745 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 12:00:24] 2026-01-13 16:59:50,746 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 12:00:24] 2026-01-13 16:59:50,746 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 12:00:24] 2026-01-13 16:59:50,746 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 12:00:24] 2026-01-13 16:59:50,746 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 12:00:24] 2026-01-13 16:59:50,746 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 12:00:24] 2026-01-13 16:59:50,746 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 12:00:24] 2026-01-13 16:59:50,746 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 12:00:24] 2026-01-13 16:59:50,746 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 12:00:24] 2026-01-13 16:59:50,746 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 12:00:24] 2026-01-13 16:59:50,746 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 12:00:24] 2026-01-13 16:59:50,747 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 12:00:24] 2026-01-13 16:59:50,747 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 12:00:24] 2026-01-13 16:59:50,747 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 12:00:24] 2026-01-13 16:59:50,747 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 12:00:24] 2026-01-13 16:59:50,747 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 12:00:24] 2026-01-13 16:59:50,747 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 12:00:24] 2026-01-13 16:59:50,747 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 12:00:24] 2026-01-13 16:59:50,747 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 12:00:24] 2026-01-13 16:59:50,747 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 12:00:24] 2026-01-13 16:59:50,747 | INFO     | job 6968661495 has completed (purged errors)
[2026-01-13 12:00:24] 2026-01-13 16:59:50,747 | INFO     | overall cleanup function is called
[2026-01-13 12:00:24] 2026-01-13 16:59:51,756 | INFO     | --- collectZombieJob: --- 10, [4178240]
[2026-01-13 12:00:24] 2026-01-13 16:59:51,756 | INFO     | zombie collector waiting for pid 4178240
[2026-01-13 12:00:24] 2026-01-13 16:59:51,756 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 12:00:24] 2026-01-13 16:59:51,756 | INFO     | collected zombie processes
[2026-01-13 12:00:24] 2026-01-13 16:59:51,757 | INFO     | will attempt to kill all subprocesses of pid=4178240
[2026-01-13 12:00:24] 2026-01-13 16:59:52,053 | INFO     | process IDs to be killed: [4178240] (in reverse order)
[2026-01-13 12:00:24] 2026-01-13 16:59:52,154 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 12:00:24] 2026-01-13 16:59:52,154 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 12:00:24] 2026-01-13 16:59:52,168 | INFO     | did not find any defunct processes belonging to 4178240
[2026-01-13 12:00:24] 2026-01-13 16:59:52,181 | INFO     | did not find any defunct processes belonging to 4178240
[2026-01-13 12:00:24] 2026-01-13 16:59:52,182 | INFO     | ready for new job
[2026-01-13 12:00:24] 2026-01-13 16:59:52,182 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 12:00:24] 2026-01-13 16:59:52,184 | INFO     | ***************************************
[2026-01-13 12:00:24] 2026-01-13 16:59:52,184 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 12:00:24] 2026-01-13 16:59:52,184 | INFO     | ***************************************
[2026-01-13 12:00:24] 2026-01-13 16:59:52,184 | INFO     | 
[2026-01-13 12:00:24] 2026-01-13 16:59:52,190 | INFO     | architecture information:
[2026-01-13 12:00:24] 2026-01-13 16:59:52,190 | INFO     | executing command: cat /etc/os-release
[2026-01-13 12:00:24] 2026-01-13 16:59:52,205 | INFO     | cat /etc/os-release:
[2026-01-13 12:00:24] NAME="CentOS Linux"
[2026-01-13 12:00:24] VERSION="7 (Core)"
[2026-01-13 12:00:24] ID="centos"
[2026-01-13 12:00:24] ID_LIKE="rhel fedora"
[2026-01-13 12:00:24] VERSION_ID="7"
[2026-01-13 12:00:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 12:00:24] ANSI_COLOR="0;31"
[2026-01-13 12:00:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 12:00:24] HOME_URL="https://www.centos.org/"
[2026-01-13 12:00:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 12:00:24] 
[2026-01-13 12:00:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 12:00:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 12:00:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 12:00:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 12:00:24] 
[2026-01-13 12:00:24] 2026-01-13 16:59:52,205 | INFO     | ***************************************
[2026-01-13 12:00:24] 2026-01-13 16:59:52,708 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-13 12:00:24] 2026-01-13 16:59:52,727 | INFO     | sufficient remaining disk space (129507524608 B)
[2026-01-13 12:00:24] 2026-01-13 16:59:52,728 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 12:00:24] 2026-01-13 16:59:52,728 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 12:00:24] 2026-01-13 16:59:52,728 | INFO     | update_server=False
[2026-01-13 12:00:24] 2026-01-13 16:59:52,728 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 12:00:24] 2026-01-13 16:59:52,729 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 12:00:24] 2026-01-13 16:59:52,729 | INFO     | aborting loop
[2026-01-13 12:00:24] 2026-01-13 16:59:53,271 | INFO     | all data control threads have been joined
[2026-01-13 12:00:24] 2026-01-13 16:59:53,571 | INFO     | all payload control threads have been joined
[2026-01-13 12:00:24] 2026-01-13 16:59:53,734 | INFO     | [job] retrieve thread has finished
[2026-01-13 12:00:24] 2026-01-13 16:59:53,735 | INFO     | [job] job monitor thread has finished
[2026-01-13 12:00:24] 2026-01-13 16:59:53,767 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 12:00:24] 2026-01-13 16:59:53,884 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 12:00:24] 2026-01-13 16:59:54,109 | INFO     | [data] copytool_in thread has finished
[2026-01-13 12:00:24] 2026-01-13 16:59:54,163 | INFO     | [job] validate thread has finished
[2026-01-13 12:00:24] 2026-01-13 16:59:54,267 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 12:00:24] 2026-01-13 16:59:54,277 | INFO     | [data] control thread has finished
[2026-01-13 12:00:24] 2026-01-13 16:59:54,355 | INFO     | all job control threads have been joined
[2026-01-13 12:00:24] 2026-01-13 16:59:54,572 | INFO     | [payload] control thread has finished
[2026-01-13 12:00:24] 2026-01-13 16:59:54,624 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 12:00:24] 2026-01-13 16:59:54,696 | INFO     | [payload] failed_post thread has finished
[2026-01-13 12:00:24] 2026-01-13 16:59:54,706 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 12:00:24] 2026-01-13 16:59:54,864 | INFO     | [payload] validate_post thread has finished
[2026-01-13 12:00:24] 2026-01-13 16:59:55,158 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 12:00:24] 2026-01-13 16:59:55,360 | INFO     | [job] control thread has finished
[2026-01-13 12:00:24] 2026-01-13 16:59:55,443 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 12:00:24] 2026-01-13 16:59:55,773 | INFO     | [data] copytool_out thread has finished
[2026-01-13 12:00:24] 2026-01-13 16:59:56,448 | INFO     | [job] queue monitor thread has finished
[2026-01-13 12:00:24] 2026-01-13 16:59:58,275 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 12:00:24] 2026-01-13 17:00:17,379 | INFO     | [monitor] cgroup control has ended
[2026-01-13 12:00:24] 2026-01-13 17:00:17,914 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139693143181120)>', '<ExcThread(monitor, started 139692779489024)>']
[2026-01-13 12:00:24] 2026-01-13 17:00:22,940 | INFO     | all workflow threads have been joined
[2026-01-13 12:00:24] 2026-01-13 17:00:22,941 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 12:00:24] 2026-01-13 17:00:22,941 | INFO     | traces error code: 0
[2026-01-13 12:00:24] 2026-01-13 17:00:22,941 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 12:00:24] 2026-01-13 17:00:23,938 | INFO     | PID=4169958 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 12:00:24] 2026-01-13 17:00:23,939 | INFO     | .. there are 13 such processes running
[2026-01-13 12:00:24] 2026-01-13 17:00:23,940 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 12:00:24] 2026-01-13 17:00:23,940 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 12:00:24] 2026-01-13 17:00:23,940 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 12:00:24] 2026-01-13 17:00:23,940 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 12:00:24] 2026-01-13 17:00:23,940 | INFO     | [monitor] control thread has ended
[2026-01-13 12:00:24] 2026-01-13 17:00:24,289 [wrapper] ==== pilot stdout END ====
[2026-01-13 12:00:24] 2026-01-13 17:00:24,294 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 12:00:24] 2026-01-13 17:00:24,297 [wrapper] pilotpid: 4169958
[2026-01-13 12:00:24] 2026-01-13 17:00:24,300 [wrapper] Pilot exit status: 0
[2026-01-13 12:00:24] 2026-01-13 17:00:24,312 [wrapper] pandaids: 6968661495
[2026-01-13 12:00:24] 2026-01-13 17:00:24,393 [wrapper] cleanup supervisor_pilot  299279 4169959
[2026-01-13 12:00:24] 2026-01-13 17:00:24,397 [wrapper] Test setup, not cleaning
[2026-01-13 12:00:24] 2026-01-13 17:00:24,400 [wrapper] apfmon messages muted
[2026-01-13 12:00:24] 2026-01-13 17:00:24,404 [wrapper] ==== wrapper stdout END ====
[2026-01-13 12:00:24] 2026-01-13 17:00:24,408 [wrapper] ==== wrapper stderr END ====
[2026-01-13 12:00:24]  *** Error codes and diagnostics ***
[2026-01-13 12:00:24]     "exeErrorCode": 0,
[2026-01-13 12:00:24]     "exeErrorDiag": "",
[2026-01-13 12:00:24]     "pilotErrorCode": 0,
[2026-01-13 12:00:24]     "pilotErrorDiag": "",
[2026-01-13 12:00:24]  *** Listing of results directory ***
[2026-01-13 12:00:24] total 609896
[2026-01-13 12:00:24] -rw-r--r--. 1 boincer umatlas    579449 Jan 13 06:09 pilot3.tar.gz
[2026-01-13 12:00:24] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 07:02 queuedata.json
[2026-01-13 12:00:24] -rwx------. 1 boincer umatlas     36322 Jan 13 07:02 runpilot2-wrapper.sh
[2026-01-13 12:00:24] -rw-r--r--. 1 boincer umatlas       100 Jan 13 09:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 12:00:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 09:56 run_atlas
[2026-01-13 12:00:24] -rw-r--r--. 1 boincer umatlas       105 Jan 13 09:56 job.xml
[2026-01-13 12:00:24] -rw-r--r--. 2 boincer umatlas 319066566 Jan 13 09:56 EVNT.48188524._000001.pool.root.1
[2026-01-13 12:00:24] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 09:56 start_atlas.sh
[2026-01-13 12:00:24] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 09:56 shared
[2026-01-13 12:00:24] -rw-r--r--. 2 boincer umatlas    592409 Jan 13 09:56 input.tar.gz
[2026-01-13 12:00:24] -rw-r--r--. 1 boincer umatlas         0 Jan 13 09:56 boinc_lockfile
[2026-01-13 12:00:24] -rw-r--r--. 1 boincer umatlas      2637 Jan 13 09:56 pandaJob.out
[2026-01-13 12:00:24] -rw-------. 1 boincer umatlas        57 Jan 13 09:56 setup.sh.local
[2026-01-13 12:00:24] -rw-------. 1 boincer umatlas    996105 Jan 13 09:56 agis_schedconf.cvmfs.json
[2026-01-13 12:00:24] -rw-------. 1 boincer umatlas   1516246 Jan 13 09:57 agis_ddmendpoints.agis.ALL.json
[2026-01-13 12:00:24] drwx------. 5 boincer umatlas      4096 Jan 13 09:57 pilot3
[2026-01-13 12:00:24] -rw-r--r--. 1 boincer umatlas      6956 Jan 13 11:57 init_data.xml
[2026-01-13 12:00:24] -rw-------. 1 boincer umatlas 298634405 Jan 13 11:59 HITS.48188528._000006.pool.root.1
[2026-01-13 12:00:24] -rw-r--r--. 1 boincer umatlas       529 Jan 13 11:59 boinc_task_state.xml
[2026-01-13 12:00:24] -rw-------. 1 boincer umatlas      1027 Jan 13 11:59 memory_monitor_summary.json
[2026-01-13 12:00:24] -rw-------. 1 boincer umatlas    406689 Jan 13 11:59 log.48188528._000006.job.log.tgz.1
[2026-01-13 12:00:24] -rw-------. 1 boincer umatlas      7754 Jan 13 11:59 heartbeat.json
[2026-01-13 12:00:24] -rw-r--r--. 1 boincer umatlas        27 Jan 13 12:00 wrapper_checkpoint.txt
[2026-01-13 12:00:24] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 12:00 boinc_mmap_file
[2026-01-13 12:00:24] -rw-------. 1 boincer umatlas        95 Jan 13 12:00 pilot_heartbeat.json
[2026-01-13 12:00:24] -rw-------. 1 boincer umatlas       823 Jan 13 12:00 pilotlog.txt
[2026-01-13 12:00:24] -rw-------. 1 boincer umatlas   1045285 Jan 13 12:00 log.48188528._000006.job.log.1
[2026-01-13 12:00:24] -rw-------. 1 boincer umatlas       357 Jan 13 12:00 output.list
[2026-01-13 12:00:24] -rw-r--r--. 1 boincer umatlas       620 Jan 13 12:00 runtime_log
[2026-01-13 12:00:24] -rw-------. 1 boincer umatlas   1474560 Jan 13 12:00 result.tar.gz
[2026-01-13 12:00:24] -rw-r--r--. 1 boincer umatlas      9337 Jan 13 12:00 runtime_log.err
[2026-01-13 12:00:24] -rw-------. 1 boincer umatlas       651 Jan 13 12:00 AE7MDmvHsz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpznKDmT4Gm6m.diag
[2026-01-13 12:00:24] -rw-r--r--. 1 boincer umatlas     21334 Jan 13 12:00 stderr.txt
[2026-01-13 12:00:24] HITS file was successfully produced:
[2026-01-13 12:00:24] -rw-------. 1 boincer umatlas 298634405 Jan 13 11:59 shared/HITS.pool.root.1
[2026-01-13 12:00:24]  *** Contents of shared directory: ***
[2026-01-13 12:00:24] total 605272
[2026-01-13 12:00:24] -rw-r--r--. 2 boincer umatlas 319066566 Jan 13 09:56 ATLAS.root_0
[2026-01-13 12:00:24] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 09:56 start_atlas.sh
[2026-01-13 12:00:24] -rw-r--r--. 2 boincer umatlas    592409 Jan 13 09:56 input.tar.gz
[2026-01-13 12:00:24] -rw-------. 1 boincer umatlas 298634405 Jan 13 11:59 HITS.pool.root.1
[2026-01-13 12:00:24] -rw-------. 1 boincer umatlas   1474560 Jan 13 12:00 result.tar.gz
12:00:25 (4165876): run_atlas exited; CPU time 45534.315098
12:00:25 (4165876): called boinc_finish(0)

</stderr_txt>
]]>

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