Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:44:14 (3730447): wrapper (7.7.26015): starting
20:44:14 (3730447): wrapper: running run_atlas (--nthreads 4)
[2026-01-13 20:44:14] Arguments: --nthreads 4
[2026-01-13 20:44:14] Threads: 4
[2026-01-13 20:44:14] Checking for CVMFS
[2026-01-13 20:44:14] No cvmfs_config command found, will try listing directly
[2026-01-13 20:44:14] CVMFS is ok
[2026-01-13 20:44:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 20:44:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 20:44:14] Further information can be found at the LHC@home message board.
[2026-01-13 20:44:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 20:44:14] Checking for apptainer binary...
[2026-01-13 20:44:14] which: no apptainer in ((null))
[2026-01-13 20:44:14] apptainer is not installed, using version from CVMFS
[2026-01-13 20:44:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 20:44:14] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-01-13 20:44:14] apptainer works
[2026-01-13 20:44:14] Set ATHENA_PROC_NUMBER=4
[2026-01-13 20:44:14] Set ATHENA_CORE_NUMBER=4
[2026-01-13 20:44:14] Starting ATLAS job with PandaID=6968661574
[2026-01-13 20:44:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 23:55:42]  *** The last 200 lines of the pilot log: ***
[2026-01-13 23:55:42] 2026-01-13 22:29:41,784 | INFO     | time since job start (9912s) is within the limit (349056.0s)
[2026-01-13 23:55:42] 2026-01-13 22:29:42,358 | INFO     | monitor loop #694: job 0:6968661574 is in state 'finished'
[2026-01-13 23:55:42] 2026-01-13 22:29:42,358 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 23:55:42] 2026-01-13 22:29:43,790 | INFO     | time since job start (9914s) is within the limit (349056.0s)
[2026-01-13 23:55:42] 2026-01-13 22:29:44,860 | INFO     | monitor loop #695: job 0:6968661574 is in state 'finished'
[2026-01-13 23:55:42] 2026-01-13 22:29:44,860 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 23:55:42] 2026-01-13 22:29:45,796 | INFO     | time since job start (9916s) is within the limit (349056.0s)
[2026-01-13 23:55:42] 2026-01-13 22:29:47,225 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 23:55:42] 2026-01-13 22:29:47,245 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2722.4859843749996
[2026-01-13 23:55:42] 2026-01-13 22:29:47,269 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6968661574/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 23:55:42] 2026-01-13 22:29:47,269 | INFO     | extracted standard info from prmon json
[2026-01-13 23:55:42] 2026-01-13 22:29:47,269 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 23:55:42] 2026-01-13 22:29:47,269 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 23:55:42] 2026-01-13 22:29:47,270 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 23:55:42] 2026-01-13 22:29:47,270 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 23:55:42] 2026-01-13 22:29:47,273 | INFO     | fitting pss+swap vs Time
[2026-01-13 23:55:42] 2026-01-13 22:29:47,273 | INFO     | sum of square deviations: 1318277740.5
[2026-01-13 23:55:42] 2026-01-13 22:29:47,274 | INFO     | sum of deviations: -7596522058.500002
[2026-01-13 23:55:42] 2026-01-13 22:29:47,274 | INFO     | mean x: 1768338411.5
[2026-01-13 23:55:42] 2026-01-13 22:29:47,274 | INFO     | mean y: 2409143.1666666665
[2026-01-13 23:55:42] 2026-01-13 22:29:47,275 | INFO     | intersect: 10192387580.303604
[2026-01-13 23:55:42] 2026-01-13 22:29:47,275 | INFO     | chi2: 1.47014798561852
[2026-01-13 23:55:42] 2026-01-13 22:29:47,275 | INFO     | sum of square deviations: 1199940638.0
[2026-01-13 23:55:42] 2026-01-13 22:29:47,276 | INFO     | sum of deviations: -7481695444.999998
[2026-01-13 23:55:42] 2026-01-13 22:29:47,276 | INFO     | mean x: 1768338259.0
[2026-01-13 23:55:42] 2026-01-13 22:29:47,276 | INFO     | mean y: 2409291.146496815
[2026-01-13 23:55:42] 2026-01-13 22:29:47,276 | INFO     | intersect: 11028094961.423403
[2026-01-13 23:55:42] 2026-01-13 22:29:47,277 | INFO     | chi2: 1.4679076551794845
[2026-01-13 23:55:42] 2026-01-13 22:29:47,277 | INFO     | current chi2=1.4679076551794845 (change=0.15238809024337346 %)
[2026-01-13 23:55:42] 2026-01-13 22:29:47,277 | INFO     | right removable region: 156
[2026-01-13 23:55:42] 2026-01-13 22:29:47,277 | INFO     | sum of square deviations: 1199940638.0
[2026-01-13 23:55:42] 2026-01-13 22:29:47,278 | INFO     | sum of deviations: -22453132967.000004
[2026-01-13 23:55:42] 2026-01-13 22:29:47,278 | INFO     | mean x: 1768338564.0
[2026-01-13 23:55:42] 2026-01-13 22:29:47,278 | INFO     | mean y: 2427804.312101911
[2026-01-13 23:55:42] 2026-01-13 22:29:47,278 | INFO     | intersect: 33091348748.221203
[2026-01-13 23:55:42] 2026-01-13 22:29:47,279 | INFO     | chi2: 0.27747478627591793
[2026-01-13 23:55:42] 2026-01-13 22:29:47,279 | INFO     | current chi2=0.27747478627591793 (change=81.12606424725475 %)
[2026-01-13 23:55:42] 2026-01-13 22:29:47,279 | INFO     | sum of square deviations: 1088905998.0
[2026-01-13 23:55:42] 2026-01-13 22:29:47,280 | INFO     | sum of deviations: -14046768076.5
[2026-01-13 23:55:42] 2026-01-13 22:29:47,280 | INFO     | mean x: 1768338716.5
[2026-01-13 23:55:42] 2026-01-13 22:29:47,280 | INFO     | mean y: 2416240.6513157897
[2026-01-13 23:55:42] 2026-01-13 22:29:47,280 | INFO     | intersect: 22813791948.925434
[2026-01-13 23:55:42] 2026-01-13 22:29:47,280 | INFO     | chi2: 0.21768863867426794
[2026-01-13 23:55:42] 2026-01-13 22:29:47,280 | INFO     | current chi2=0.21768863867426794 (change=21.546515416431134 %)
[2026-01-13 23:55:42] 2026-01-13 22:29:47,280 | INFO     | left removable region: 20
[2026-01-13 23:55:42] 2026-01-13 22:29:47,281 | INFO     | sum of square deviations: 779958810.0
[2026-01-13 23:55:42] 2026-01-13 22:29:47,281 | INFO     | sum of deviations: 1911378269.9999998
[2026-01-13 23:55:42] 2026-01-13 22:29:47,281 | INFO     | mean x: 1768338838.5
[2026-01-13 23:55:42] 2026-01-13 22:29:47,282 | INFO     | mean y: 2391109.4411764704
[2026-01-13 23:55:42] 2026-01-13 22:29:47,282 | INFO     | intersect: -4331125464.217296
[2026-01-13 23:55:42] 2026-01-13 22:29:47,282 | INFO     | chi2: 0.001624251441303877
[2026-01-13 23:55:42] 2026-01-13 22:29:47,282 | INFO     | current memory leak: 2.45 B/s (using 136 data points, chi2=0.00)
[2026-01-13 23:55:42] 2026-01-13 22:29:47,282 | INFO     | could have reported an average CPU frequency of 2747 MHz (9 samples)
[2026-01-13 23:55:42] 2026-01-13 22:29:47,282 | INFO     | ..............................
[2026-01-13 23:55:42] 2026-01-13 22:29:47,283 | INFO     | . Timing measurements:
[2026-01-13 23:55:42] 2026-01-13 22:29:47,283 | INFO     | . get job = 0 s
[2026-01-13 23:55:42] 2026-01-13 22:29:47,283 | INFO     | . initial setup = 1 s
[2026-01-13 23:55:42] 2026-01-13 22:29:47,283 | INFO     | . payload setup = 8 s
[2026-01-13 23:55:42] 2026-01-13 22:29:47,283 | INFO     | . stage-in = 0 s
[2026-01-13 23:55:42] 2026-01-13 22:29:47,283 | INFO     | . payload execution = 9876 s
[2026-01-13 23:55:42] 2026-01-13 22:29:47,283 | INFO     | . stage-out = 1 s
[2026-01-13 23:55:42] 2026-01-13 22:29:47,283 | INFO     | . log creation = 0 s
[2026-01-13 23:55:42] 2026-01-13 22:29:47,283 | INFO     | ..............................
[2026-01-13 23:55:42] 2026-01-13 22:29:47,376 | INFO     | 
[2026-01-13 23:55:42] 2026-01-13 22:29:47,376 | INFO     | job summary report
[2026-01-13 23:55:42] 2026-01-13 22:29:47,376 | INFO     | --------------------------------------------------
[2026-01-13 23:55:42] 2026-01-13 22:29:47,376 | INFO     | PanDA job id: 6968661574
[2026-01-13 23:55:42] 2026-01-13 22:29:47,376 | INFO     | task id: 48188528
[2026-01-13 23:55:42] 2026-01-13 22:29:47,376 | INFO     | errors: (none)
[2026-01-13 23:55:42] 2026-01-13 22:29:47,376 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 23:55:42] 2026-01-13 22:29:47,376 | INFO     | pilot state: finished 
[2026-01-13 23:55:42] 2026-01-13 22:29:47,377 | INFO     | transexitcode: 0
[2026-01-13 23:55:42] 2026-01-13 22:29:47,377 | INFO     | exeerrorcode: 0
[2026-01-13 23:55:42] 2026-01-13 22:29:47,377 | INFO     | exeerrordiag: 
[2026-01-13 23:55:42] 2026-01-13 22:29:47,377 | INFO     | exitcode: 0
[2026-01-13 23:55:42] 2026-01-13 22:29:47,377 | INFO     | exitmsg: OK
[2026-01-13 23:55:42] 2026-01-13 22:29:47,377 | INFO     | cpuconsumptiontime: 37825 s
[2026-01-13 23:55:42] 2026-01-13 22:29:47,377 | INFO     | nevents: 400
[2026-01-13 23:55:42] 2026-01-13 22:29:47,377 | INFO     | neventsw: 0
[2026-01-13 23:55:42] 2026-01-13 22:29:47,377 | INFO     | pid: 3742392
[2026-01-13 23:55:42] 2026-01-13 22:29:47,377 | INFO     | pgrp: 3742392
[2026-01-13 23:55:42] 2026-01-13 22:29:47,377 | INFO     | corecount: 4
[2026-01-13 23:55:42] 2026-01-13 22:29:47,377 | INFO     | event service: False
[2026-01-13 23:55:42] 2026-01-13 22:29:47,377 | INFO     | sizes: {0: 2284146, 6: 2284408, 11: 2284436, 9888: 2313141, 9889: 2313140, 9892: 2322402, 9901: 2322604}
[2026-01-13 23:55:42] 2026-01-13 22:29:47,377 | INFO     | --------------------------------------------------
[2026-01-13 23:55:42] 2026-01-13 22:29:47,377 | INFO     | 
[2026-01-13 23:55:42] 2026-01-13 22:29:47,377 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2026-01-13 23:55:42] 2026-01-13 22:29:47,405 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 23:55:42] 2026-01-13 22:29:47,405 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 23:55:42] 2026-01-13 22:29:47,405 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 23:55:42] 2026-01-13 22:29:47,405 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 23:55:42] 2026-01-13 22:29:47,405 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 23:55:42] 2026-01-13 22:29:47,406 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 23:55:42] 2026-01-13 22:29:47,406 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 23:55:42] 2026-01-13 22:29:47,406 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 23:55:42] 2026-01-13 22:29:47,406 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 23:55:42] 2026-01-13 22:29:47,406 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 23:55:42] 2026-01-13 22:29:47,406 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 23:55:42] 2026-01-13 22:29:47,406 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 23:55:42] 2026-01-13 22:29:47,406 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 23:55:42] 2026-01-13 22:29:47,406 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 23:55:42] 2026-01-13 22:29:47,406 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 23:55:42] 2026-01-13 22:29:47,406 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 23:55:42] 2026-01-13 22:29:47,406 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 23:55:42] 2026-01-13 22:29:47,406 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 23:55:42] 2026-01-13 22:29:47,407 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 23:55:42] 2026-01-13 22:29:47,407 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 23:55:42] 2026-01-13 22:29:47,407 | INFO     | job 6968661574 has completed (purged errors)
[2026-01-13 23:55:42] 2026-01-13 22:29:47,407 | INFO     | overall cleanup function is called
[2026-01-13 23:55:42] 2026-01-13 22:29:48,416 | INFO     | --- collectZombieJob: --- 10, [3742392]
[2026-01-13 23:55:42] 2026-01-13 22:29:48,416 | INFO     | zombie collector waiting for pid 3742392
[2026-01-13 23:55:42] 2026-01-13 22:29:48,416 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 23:55:42] 2026-01-13 22:29:48,417 | INFO     | collected zombie processes
[2026-01-13 23:55:42] 2026-01-13 22:29:48,417 | INFO     | will attempt to kill all subprocesses of pid=3742392
[2026-01-13 23:55:42] 2026-01-13 22:29:48,970 | INFO     | process IDs to be killed: [3742392] (in reverse order)
[2026-01-13 23:55:42] 2026-01-13 22:29:49,178 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 23:55:42] 2026-01-13 22:29:49,178 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 23:55:42] 2026-01-13 22:29:49,203 | INFO     | did not find any defunct processes belonging to 3742392
[2026-01-13 23:55:42] 2026-01-13 22:29:49,224 | INFO     | did not find any defunct processes belonging to 3742392
[2026-01-13 23:55:42] 2026-01-13 22:29:49,224 | INFO     | ready for new job
[2026-01-13 23:55:42] 2026-01-13 22:29:49,224 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 23:55:42] 2026-01-13 22:29:49,226 | INFO     | ***************************************
[2026-01-13 23:55:42] 2026-01-13 22:29:49,226 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 23:55:42] 2026-01-13 22:29:49,226 | INFO     | ***************************************
[2026-01-13 23:55:42] 2026-01-13 22:29:49,226 | INFO     | 
[2026-01-13 23:55:42] 2026-01-13 22:29:49,234 | INFO     | architecture information:
[2026-01-13 23:55:42] 2026-01-13 22:29:49,234 | INFO     | executing command: cat /etc/os-release
[2026-01-13 23:55:42] 2026-01-13 22:29:49,254 | INFO     | cat /etc/os-release:
[2026-01-13 23:55:42] NAME="CentOS Linux"
[2026-01-13 23:55:42] VERSION="7 (Core)"
[2026-01-13 23:55:42] ID="centos"
[2026-01-13 23:55:42] ID_LIKE="rhel fedora"
[2026-01-13 23:55:42] VERSION_ID="7"
[2026-01-13 23:55:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 23:55:42] ANSI_COLOR="0;31"
[2026-01-13 23:55:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 23:55:42] HOME_URL="https://www.centos.org/"
[2026-01-13 23:55:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 23:55:42] 
[2026-01-13 23:55:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 23:55:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 23:55:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 23:55:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 23:55:42] 
[2026-01-13 23:55:42] 2026-01-13 22:29:49,254 | INFO     | ***************************************
[2026-01-13 23:55:42] 2026-01-13 22:29:49,757 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2026-01-13 23:55:42] 2026-01-13 22:29:49,779 | INFO     | sufficient remaining disk space (3359418351616 B)
[2026-01-13 23:55:42] 2026-01-13 22:29:49,780 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 23:55:42] 2026-01-13 22:29:49,780 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 23:55:42] 2026-01-13 22:29:49,780 | INFO     | update_server=False
[2026-01-13 23:55:42] 2026-01-13 22:29:49,780 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 23:55:42] 2026-01-13 22:29:49,781 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 23:55:42] 2026-01-13 22:29:49,781 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 23:55:42] 2026-01-13 22:29:49,871 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-13 23:55:42] 2026-01-13 22:29:49,871 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-13 23:55:42] 2026-01-13 22:29:49,871 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 23:55:42] 2026-01-13 22:29:49,871 | INFO     | will abort loop
[2026-01-13 23:55:42] 2026-01-13 22:29:49,936 | INFO     | all data control threads have been joined
[2026-01-13 23:55:42] 2026-01-13 22:29:49,969 | INFO     | all job control threads have been joined
[2026-01-13 23:55:42] 2026-01-13 22:29:50,069 | INFO     | all payload control threads have been joined
[2026-01-13 23:55:42] 2026-01-13 22:29:50,785 | INFO     | [job] retrieve thread has finished
[2026-01-13 23:55:42] 2026-01-13 22:29:50,877 | INFO     | [job] job monitor thread has finished
[2026-01-13 23:55:42] 2026-01-13 22:29:50,941 | INFO     | [data] control thread has finished
[2026-01-13 23:55:42] 2026-01-13 22:29:50,975 | INFO     | [job] control thread has finished
[2026-01-13 23:55:42] 2026-01-13 22:29:51,056 | INFO     | [payload] validate_post thread has finished
[2026-01-13 23:55:42] 2026-01-13 22:29:51,068 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 23:55:42] 2026-01-13 22:29:51,075 | INFO     | [payload] control thread has finished
[2026-01-13 23:55:42] 2026-01-13 22:29:51,204 | INFO     | [job] validate thread has finished
[2026-01-13 23:55:42] 2026-01-13 22:29:51,314 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 23:55:42] 2026-01-13 22:29:51,442 | INFO     | [data] copytool_in thread has finished
[2026-01-13 23:55:42] 2026-01-13 22:29:51,510 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 23:55:42] 2026-01-13 22:29:51,787 | INFO     | [data] copytool_out thread has finished
[2026-01-13 23:55:42] 2026-01-13 22:29:52,139 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 23:55:42] 2026-01-13 22:29:52,183 | INFO     | [payload] failed_post thread has finished
[2026-01-13 23:55:42] 2026-01-13 22:29:52,385 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 23:55:42] 2026-01-13 22:29:53,390 | INFO     | [job] queue monitor thread has finished
[2026-01-13 23:55:42] 2026-01-13 22:29:53,787 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 23:55:42] 2026-01-13 22:30:19,690 | INFO     | PID=3734980 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 23:55:42] 2026-01-13 22:30:19,692 | INFO     | .. there are 4 such processes running
[2026-01-13 23:55:42] 2026-01-13 22:30:19,693 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 23:55:42] 2026-01-13 22:30:19,693 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 23:55:42] 2026-01-13 22:30:19,693 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 23:55:42] 2026-01-13 22:30:42,896 | INFO     | [monitor] cgroup control has ended
[2026-01-13 23:55:42] 2026-01-13 22:30:43,783 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22878904928064)>', '<ExcThread(monitor, started 22878663698176)>']
[2026-01-13 23:55:42] 2026-01-13 22:30:43,805 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 23:55:42] 2026-01-13 22:30:43,805 | INFO     | [monitor] control thread has ended
[2026-01-13 23:55:42] 2026-01-13 22:30:48,808 | INFO     | all workflow threads have been joined
[2026-01-13 23:55:42] 2026-01-13 22:30:48,811 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 23:55:42] 2026-01-13 22:30:48,812 | INFO     | traces error code: 0
[2026-01-13 23:55:42] 2026-01-13 22:30:48,812 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 23:55:42] 2026-01-13 22:30:48,945 [wrapper] ==== pilot stdout END ====
[2026-01-13 23:55:42] 2026-01-13 22:30:48,949 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 23:55:42] 2026-01-13 22:30:48,952 [wrapper] pilotpid: 3734980
[2026-01-13 23:55:42] 2026-01-13 22:30:48,956 [wrapper] Pilot exit status: 0
[2026-01-13 23:55:42] 2026-01-13 22:30:48,969 [wrapper] pandaids: 6968661574
[2026-01-13 23:55:42] 2026-01-13 22:30:49,127 [wrapper] cleanup supervisor_pilot 3945254 3734981
[2026-01-13 23:55:42] 2026-01-13 22:30:49,131 [wrapper] Test setup, not cleaning
[2026-01-13 23:55:42] 2026-01-13 22:30:49,138 [wrapper] apfmon messages muted
[2026-01-13 23:55:42] 2026-01-13 22:30:49,142 [wrapper] ==== wrapper stdout END ====
[2026-01-13 23:55:42] 2026-01-13 22:30:49,146 [wrapper] ==== wrapper stderr END ====
[2026-01-13 23:55:42]  *** Error codes and diagnostics ***
[2026-01-13 23:55:42]     "exeErrorCode": 0,
[2026-01-13 23:55:42]     "exeErrorDiag": "",
[2026-01-13 23:55:42]     "pilotErrorCode": 0,
[2026-01-13 23:55:42]     "pilotErrorDiag": "",
[2026-01-13 23:55:42]  *** Listing of results directory ***
[2026-01-13 23:55:42] total 604204
[2026-01-13 23:55:42] -rw-r--r-- 1 boinc boinc    579449 Jan 13 12:09 pilot3.tar.gz
[2026-01-13 23:55:42] -rw-r--r-- 1 boinc boinc      5112 Jan 13 13:02 queuedata.json
[2026-01-13 23:55:42] -rwx------ 1 boinc boinc     36322 Jan 13 13:02 runpilot2-wrapper.sh
[2026-01-13 23:55:42] -rw-r--r-- 1 boinc boinc       100 Jan 13 20:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 23:55:42] -rwxr-xr-x 1 boinc boinc      7986 Jan 13 20:44 run_atlas
[2026-01-13 23:55:42] -rw-r--r-- 1 boinc boinc       105 Jan 13 20:44 job.xml
[2026-01-13 23:55:42] -rw-r--r-- 1 boinc boinc      6692 Jan 13 20:44 init_data.xml
[2026-01-13 23:55:42] -rw-r--r-- 2 boinc boinc 320001667 Jan 13 20:44 EVNT.48188524._000004.pool.root.1
[2026-01-13 23:55:42] -rw-r--r-- 2 boinc boinc     15847 Jan 13 20:44 start_atlas.sh
[2026-01-13 23:55:42] drwxrwx--x 2 boinc boinc      4096 Jan 13 20:44 shared
[2026-01-13 23:55:42] -rw-r--r-- 2 boinc boinc    592413 Jan 13 20:44 input.tar.gz
[2026-01-13 23:55:42] -rw-r--r-- 1 boinc boinc         0 Jan 13 20:44 boinc_lockfile
[2026-01-13 23:55:42] -rw-r--r-- 1 boinc boinc      2640 Jan 13 20:44 pandaJob.out
[2026-01-13 23:55:42] -rw------- 1 boinc boinc    997234 Jan 13 20:44 agis_schedconf.cvmfs.json
[2026-01-13 23:55:42] -rw------- 1 boinc boinc   1516246 Jan 13 20:44 agis_ddmendpoints.agis.ALL.json
[2026-01-13 23:55:42] drwx------ 5 boinc boinc      4096 Jan 13 20:44 pilot3
[2026-01-13 23:55:42] -rw------- 1 boinc boinc 291229808 Jan 13 23:28 HITS.48188528._000085.pool.root.1
[2026-01-13 23:55:42] -rw-r--r-- 1 boinc boinc       529 Jan 13 23:29 boinc_task_state.xml
[2026-01-13 23:55:42] -rw------- 1 boinc boinc      1030 Jan 13 23:29 memory_monitor_summary.json
[2026-01-13 23:55:42] -rw------- 1 boinc boinc    390940 Jan 13 23:29 log.48188528._000085.job.log.tgz.1
[2026-01-13 23:55:42] -rw------- 1 boinc boinc      7772 Jan 13 23:29 heartbeat.json
[2026-01-13 23:55:42] -rw------- 1 boinc boinc        95 Jan 13 23:30 pilot_heartbeat.json
[2026-01-13 23:55:42] -rw------- 1 boinc boinc      5021 Jan 13 23:30 pilotlog.txt
[2026-01-13 23:55:42] -rw------- 1 boinc boinc   1382945 Jan 13 23:30 log.48188528._000085.job.log.1
[2026-01-13 23:55:42] -rw------- 1 boinc boinc       357 Jan 13 23:30 output.list
[2026-01-13 23:55:42] -rw-r--r-- 1 boinc boinc       620 Jan 13 23:30 runtime_log
[2026-01-13 23:55:42] -rw------- 1 boinc boinc   1792000 Jan 13 23:30 result.tar.gz
[2026-01-13 23:55:42] -rw-r--r-- 1 boinc boinc      9222 Jan 13 23:30 runtime_log.err
[2026-01-13 23:55:42] -rw------- 1 boinc boinc       663 Jan 13 23:30 jEzNDmYHsz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmv5hKDmTjYtZm.diag
[2026-01-13 23:55:42] -rw-r--r-- 1 boinc boinc        26 Jan 13 23:55 wrapper_checkpoint.txt
[2026-01-13 23:55:42] -rw-r--r-- 1 boinc boinc      8192 Jan 13 23:55 boinc_mmap_file
[2026-01-13 23:55:42] -rw-r--r-- 1 boinc boinc     21100 Jan 13 23:55 stderr.txt
[2026-01-13 23:55:42] HITS file was successfully produced:
[2026-01-13 23:55:42] -rw------- 1 boinc boinc 291229808 Jan 13 23:28 shared/HITS.pool.root.1
[2026-01-13 23:55:42]  *** Contents of shared directory: ***
[2026-01-13 23:55:42] total 599268
[2026-01-13 23:55:42] -rw-r--r-- 2 boinc boinc 320001667 Jan 13 20:44 ATLAS.root_0
[2026-01-13 23:55:42] -rw-r--r-- 2 boinc boinc     15847 Jan 13 20:44 start_atlas.sh
[2026-01-13 23:55:42] -rw-r--r-- 2 boinc boinc    592413 Jan 13 20:44 input.tar.gz
[2026-01-13 23:55:42] -rw------- 1 boinc boinc 291229808 Jan 13 23:28 HITS.pool.root.1
[2026-01-13 23:55:42] -rw------- 1 boinc boinc   1792000 Jan 13 23:30 result.tar.gz
23:55:43 (3730447): run_atlas exited; CPU time 38412.709552
23:55:43 (3730447): called boinc_finish(0)

</stderr_txt>
]]>

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