Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:03:17 (3556500): wrapper (7.7.26015): starting
07:03:17 (3556500): wrapper: running run_atlas (--nthreads 9)
[2026-01-13 07:03:17] Arguments: --nthreads 9
[2026-01-13 07:03:17] Threads: 9
[2026-01-13 07:03:17] Checking for CVMFS
[2026-01-13 07:03:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 07:03:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 07:03:18] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 07:03:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 07:03:18] 2.13.3.0 10223 99123 242700 155087 1 700 32968707 40960000 38498 16776704 0 1037748247 99.689 856374896 51050 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-13 07:03:18] CVMFS is ok
[2026-01-13 07:03:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 07:03:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 07:03:18] Further information can be found at the LHC@home message board.
[2026-01-13 07:03:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 07:03:18] Checking for apptainer binary...
[2026-01-13 07:03:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 07:03:18] Running /usr/bin/apptainer --version
[2026-01-13 07:03:18] apptainer version 1.4.5-2.el9
[2026-01-13 07:03:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 07:03:18] c8-7-6.aglt2.org
[2026-01-13 07:03:18] apptainer works
[2026-01-13 07:03:18] Set ATHENA_PROC_NUMBER=9
[2026-01-13 07:03:18] Set ATHENA_CORE_NUMBER=9
[2026-01-13 07:03:18] Starting ATLAS job with PandaID=6968661508
[2026-01-13 07:03:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 08:45:00]  *** The last 200 lines of the pilot log: ***
[2026-01-13 08:45:00] 2026-01-13 13:43:27,363 | INFO     | preparing for final server update for job 6968661508 in state='finished'
[2026-01-13 08:45:00] 2026-01-13 13:43:27,364 | INFO     | this job has now completed (state=finished)
[2026-01-13 08:45:00] 2026-01-13 13:43:27,364 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-13 08:45:00] 2026-01-13 13:43:27,364 | INFO     | log transfer has been attempted: DONE
[2026-01-13 08:45:00] 2026-01-13 13:43:27,364 | INFO     | job 6968661508 has finished - writing final server update
[2026-01-13 08:45:00] 2026-01-13 13:43:27,364 | INFO     | total number of processed events: 400 (read)
[2026-01-13 08:45:00] 2026-01-13 13:43:27,374 | INFO     | executing command: lscpu
[2026-01-13 08:45:00] 2026-01-13 13:43:27,567 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 08:45:00] 2026-01-13 13:43:28,517 | INFO     | time since job start (5987s) is within the limit (349056.0s)
[2026-01-13 08:45:00] 2026-01-13 13:43:28,874 | INFO     | monitor loop #368: job 0:6968661508 is in state 'finished'
[2026-01-13 08:45:00] 2026-01-13 13:43:28,874 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 08:45:00] 2026-01-13 13:43:30,523 | INFO     | time since job start (5989s) is within the limit (349056.0s)
[2026-01-13 08:45:00] 2026-01-13 13:43:31,399 | INFO     | monitor loop #369: job 0:6968661508 is in state 'finished'
[2026-01-13 08:45:00] 2026-01-13 13:43:31,399 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 08:45:00] 2026-01-13 13:43:32,530 | INFO     | time since job start (5991s) is within the limit (349056.0s)
[2026-01-13 08:45:00] 2026-01-13 13:43:33,904 | INFO     | monitor loop #370: job 0:6968661508 is in state 'finished'
[2026-01-13 08:45:00] 2026-01-13 13:43:33,920 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 08:45:00] 2026-01-13 13:43:34,539 | INFO     | time since job start (5993s) is within the limit (349056.0s)
[2026-01-13 08:45:00] 2026-01-13 13:43:36,429 | INFO     | monitor loop #371: job 0:6968661508 is in state 'finished'
[2026-01-13 08:45:00] 2026-01-13 13:43:36,430 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 08:45:00] 2026-01-13 13:43:36,782 | INFO     | PID=3578561 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 08:45:00] 2026-01-13 13:43:36,782 | INFO     | .. there are 49 such processes running
[2026-01-13 08:45:00] 2026-01-13 13:43:37,784 | INFO     | time since job start (5996s) is within the limit (349056.0s)
[2026-01-13 08:45:00] 2026-01-13 13:43:38,944 | INFO     | monitor loop #372: job 0:6968661508 is in state 'finished'
[2026-01-13 08:45:00] 2026-01-13 13:43:38,944 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 08:45:00] 2026-01-13 13:43:39,791 | INFO     | time since job start (5998s) is within the limit (349056.0s)
[2026-01-13 08:45:00] 2026-01-13 13:43:41,473 | INFO     | monitor loop #373: job 0:6968661508 is in state 'finished'
[2026-01-13 08:45:00] 2026-01-13 13:43:41,473 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 08:45:00] 2026-01-13 13:43:41,798 | INFO     | time since job start (6000s) is within the limit (349056.0s)
[2026-01-13 08:45:00] 2026-01-13 13:43:43,806 | INFO     | time since job start (6002s) is within the limit (349056.0s)
[2026-01-13 08:45:00] 2026-01-13 13:43:43,984 | INFO     | monitor loop #374: job 0:6968661508 is in state 'finished'
[2026-01-13 08:45:00] 2026-01-13 13:43:43,984 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 08:45:00] 2026-01-13 13:43:45,816 | INFO     | time since job start (6004s) is within the limit (349056.0s)
[2026-01-13 08:45:00] 2026-01-13 13:43:46,490 | INFO     | monitor loop #375: job 0:6968661508 is in state 'finished'
[2026-01-13 08:45:00] 2026-01-13 13:43:46,490 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 08:45:00] 2026-01-13 13:43:46,678 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-13 08:45:00] 2026-01-13 13:43:46,699 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.991382812499
[2026-01-13 08:45:00] 2026-01-13 13:43:46,860 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6968661508/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 08:45:00] 2026-01-13 13:43:46,877 | INFO     | extracted standard info from prmon json
[2026-01-13 08:45:00] 2026-01-13 13:43:46,877 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 08:45:00] 2026-01-13 13:43:46,877 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 08:45:00] 2026-01-13 13:43:46,878 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 08:45:00] 2026-01-13 13:43:46,878 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 08:45:00] 2026-01-13 13:43:46,879 | INFO     | fitting pss+swap vs Time
[2026-01-13 08:45:00] 2026-01-13 13:43:46,879 | INFO     | sum of square deviations: 233636466.98901114
[2026-01-13 08:45:00] 2026-01-13 13:43:46,879 | INFO     | sum of deviations: 1500092596.8131871
[2026-01-13 08:45:00] 2026-01-13 13:43:46,879 | INFO     | mean x: 1768308921.010989
[2026-01-13 08:45:00] 2026-01-13 13:43:46,879 | INFO     | mean y: 2614896.186813187
[2026-01-13 08:45:00] 2026-01-13 13:43:46,879 | INFO     | intersect: -11351037020.7122
[2026-01-13 08:45:00] 2026-01-13 13:43:46,880 | INFO     | chi2: 0.005759894236705975
[2026-01-13 08:45:00] 2026-01-13 13:43:46,880 | INFO     | current memory leak: 6.42 B/s (using 91 data points, chi2=0.01)
[2026-01-13 08:45:00] 2026-01-13 13:43:46,880 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2026-01-13 08:45:00] 2026-01-13 13:43:46,880 | INFO     | ..............................
[2026-01-13 08:45:00] 2026-01-13 13:43:46,880 | INFO     | . Timing measurements:
[2026-01-13 08:45:00] 2026-01-13 13:43:46,880 | INFO     | . get job = 0 s
[2026-01-13 08:45:00] 2026-01-13 13:43:46,880 | INFO     | . initial setup = 4 s
[2026-01-13 08:45:00] 2026-01-13 13:43:46,880 | INFO     | . payload setup = 13 s
[2026-01-13 08:45:00] 2026-01-13 13:43:46,880 | INFO     | . stage-in = 0 s
[2026-01-13 08:45:00] 2026-01-13 13:43:46,880 | INFO     | . payload execution = 5942 s
[2026-01-13 08:45:00] 2026-01-13 13:43:46,880 | INFO     | . stage-out = 2 s
[2026-01-13 08:45:00] 2026-01-13 13:43:46,880 | INFO     | . log creation = 0 s
[2026-01-13 08:45:00] 2026-01-13 13:43:46,880 | INFO     | ..............................
[2026-01-13 08:45:00] 2026-01-13 13:43:47,147 | INFO     | 
[2026-01-13 08:45:00] 2026-01-13 13:43:47,147 | INFO     | job summary report
[2026-01-13 08:45:00] 2026-01-13 13:43:47,147 | INFO     | --------------------------------------------------
[2026-01-13 08:45:00] 2026-01-13 13:43:47,147 | INFO     | PanDA job id: 6968661508
[2026-01-13 08:45:00] 2026-01-13 13:43:47,147 | INFO     | task id: 48188528
[2026-01-13 08:45:00] 2026-01-13 13:43:47,147 | INFO     | errors: (none)
[2026-01-13 08:45:00] 2026-01-13 13:43:47,147 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 08:45:00] 2026-01-13 13:43:47,147 | INFO     | pilot state: finished 
[2026-01-13 08:45:00] 2026-01-13 13:43:47,147 | INFO     | transexitcode: 0
[2026-01-13 08:45:00] 2026-01-13 13:43:47,147 | INFO     | exeerrorcode: 0
[2026-01-13 08:45:00] 2026-01-13 13:43:47,147 | INFO     | exeerrordiag: 
[2026-01-13 08:45:00] 2026-01-13 13:43:47,147 | INFO     | exitcode: 0
[2026-01-13 08:45:00] 2026-01-13 13:43:47,147 | INFO     | exitmsg: OK
[2026-01-13 08:45:00] 2026-01-13 13:43:47,147 | INFO     | cpuconsumptiontime: 32373 s
[2026-01-13 08:45:00] 2026-01-13 13:43:47,147 | INFO     | nevents: 400
[2026-01-13 08:45:00] 2026-01-13 13:43:47,147 | INFO     | neventsw: 0
[2026-01-13 08:45:00] 2026-01-13 13:43:47,148 | INFO     | pid: 3632774
[2026-01-13 08:45:00] 2026-01-13 13:43:47,148 | INFO     | pgrp: 3632774
[2026-01-13 08:45:00] 2026-01-13 13:43:47,148 | INFO     | corecount: 9
[2026-01-13 08:45:00] 2026-01-13 13:43:47,148 | INFO     | event service: False
[2026-01-13 08:45:00] 2026-01-13 13:43:47,148 | INFO     | sizes: {0: 2283961, 1: 2284160, 10: 2284422, 11: 2284450, 5959: 2311182, 5962: 2320180, 5964: 2320364, 5985: 2320558}
[2026-01-13 08:45:00] 2026-01-13 13:43:47,148 | INFO     | --------------------------------------------------
[2026-01-13 08:45:00] 2026-01-13 13:43:47,148 | INFO     | 
[2026-01-13 08:45:00] 2026-01-13 13:43:47,148 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-13 08:45:00] 2026-01-13 13:43:47,245 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 08:45:00] 2026-01-13 13:43:47,245 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 08:45:00] 2026-01-13 13:43:47,245 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 08:45:00] 2026-01-13 13:43:47,245 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 08:45:00] 2026-01-13 13:43:47,245 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 08:45:00] 2026-01-13 13:43:47,245 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 08:45:00] 2026-01-13 13:43:47,245 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 08:45:00] 2026-01-13 13:43:47,245 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 08:45:00] 2026-01-13 13:43:47,246 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 08:45:00] 2026-01-13 13:43:47,246 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 08:45:00] 2026-01-13 13:43:47,246 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 08:45:00] 2026-01-13 13:43:47,246 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 08:45:00] 2026-01-13 13:43:47,246 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 08:45:00] 2026-01-13 13:43:47,246 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 08:45:00] 2026-01-13 13:43:47,246 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 08:45:00] 2026-01-13 13:43:47,246 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 08:45:00] 2026-01-13 13:43:47,246 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 08:45:00] 2026-01-13 13:43:47,246 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 08:45:00] 2026-01-13 13:43:47,246 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 08:45:00] 2026-01-13 13:43:47,246 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 08:45:00] 2026-01-13 13:43:47,246 | INFO     | job 6968661508 has completed (purged errors)
[2026-01-13 08:45:00] 2026-01-13 13:43:47,246 | INFO     | overall cleanup function is called
[2026-01-13 08:45:00] 2026-01-13 13:43:48,262 | INFO     | --- collectZombieJob: --- 10, [3632774]
[2026-01-13 08:45:00] 2026-01-13 13:43:48,265 | INFO     | zombie collector waiting for pid 3632774
[2026-01-13 08:45:00] 2026-01-13 13:43:48,265 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 08:45:00] 2026-01-13 13:43:48,265 | INFO     | collected zombie processes
[2026-01-13 08:45:00] 2026-01-13 13:43:48,266 | INFO     | will attempt to kill all subprocesses of pid=3632774
[2026-01-13 08:45:00] 2026-01-13 13:43:50,103 | INFO     | process IDs to be killed: [3632774] (in reverse order)
[2026-01-13 08:45:00] 2026-01-13 13:43:50,322 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 08:45:00] 2026-01-13 13:43:50,323 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 08:45:00] 2026-01-13 13:43:50,528 | INFO     | did not find any defunct processes belonging to 3632774
[2026-01-13 08:45:00] 2026-01-13 13:43:50,674 | INFO     | did not find any defunct processes belonging to 3632774
[2026-01-13 08:45:00] 2026-01-13 13:43:50,674 | INFO     | ready for new job
[2026-01-13 08:45:00] 2026-01-13 13:43:50,694 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 08:45:00] 2026-01-13 13:43:50,695 | INFO     | ***************************************
[2026-01-13 08:45:00] 2026-01-13 13:43:50,695 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 08:45:00] 2026-01-13 13:43:50,696 | INFO     | ***************************************
[2026-01-13 08:45:00] 2026-01-13 13:43:50,696 | INFO     | 
[2026-01-13 08:45:00] 2026-01-13 13:43:50,704 | INFO     | architecture information:
[2026-01-13 08:45:00] 2026-01-13 13:43:50,711 | INFO     | executing command: cat /etc/os-release
[2026-01-13 08:45:00] 2026-01-13 13:43:50,880 | INFO     | cat /etc/os-release:
[2026-01-13 08:45:00] NAME="CentOS Linux"
[2026-01-13 08:45:00] VERSION="7 (Core)"
[2026-01-13 08:45:00] ID="centos"
[2026-01-13 08:45:00] ID_LIKE="rhel fedora"
[2026-01-13 08:45:00] VERSION_ID="7"
[2026-01-13 08:45:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 08:45:00] ANSI_COLOR="0;31"
[2026-01-13 08:45:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 08:45:00] HOME_URL="https://www.centos.org/"
[2026-01-13 08:45:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 08:45:00] 
[2026-01-13 08:45:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 08:45:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 08:45:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 08:45:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 08:45:00] 
[2026-01-13 08:45:00] 2026-01-13 13:43:50,880 | INFO     | ***************************************
[2026-01-13 08:45:00] 2026-01-13 13:43:51,386 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-13 08:45:00] 2026-01-13 13:43:51,438 | INFO     | sufficient remaining disk space (170036035584 B)
[2026-01-13 08:45:00] 2026-01-13 13:43:51,439 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 08:45:00] 2026-01-13 13:43:51,439 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 08:45:00] 2026-01-13 13:43:51,439 | INFO     | update_server=False
[2026-01-13 08:45:00] 2026-01-13 13:43:51,439 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 08:45:00] 2026-01-13 13:43:51,506 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-13 08:45:00] 2026-01-13 13:43:51,506 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-13 08:45:00] 2026-01-13 13:43:51,506 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 08:45:00] 2026-01-13 13:43:51,506 | INFO     | will abort loop
[2026-01-13 08:45:00] 2026-01-13 13:43:51,784 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 08:45:00] 2026-01-13 13:43:52,165 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 08:45:00] 2026-01-13 13:43:52,233 | INFO     | all data control threads have been joined
[2026-01-13 08:45:00] 2026-01-13 13:43:52,445 | INFO     | [job] retrieve thread has finished
[2026-01-13 08:45:00] 2026-01-13 13:43:52,512 | INFO     | [job] job monitor thread has finished
[2026-01-13 08:45:00] 2026-01-13 13:43:52,549 | INFO     | all payload control threads have been joined
[2026-01-13 08:45:00] 2026-01-13 13:43:52,871 | INFO     | [payload] failed_post thread has finished
[2026-01-13 08:45:00] 2026-01-13 13:43:52,930 | INFO     | [job] validate thread has finished
[2026-01-13 08:45:00] 2026-01-13 13:43:52,937 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 08:45:00] 2026-01-13 13:43:52,952 | INFO     | all job control threads have been joined
[2026-01-13 08:45:00] 2026-01-13 13:43:52,967 | INFO     | [payload] validate_post thread has finished
[2026-01-13 08:45:00] 2026-01-13 13:43:53,171 | INFO     | [job] queue monitor thread has finished
[2026-01-13 08:45:00] 2026-01-13 13:43:53,243 | INFO     | [data] control thread has finished
[2026-01-13 08:45:00] 2026-01-13 13:43:53,456 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 08:45:00] 2026-01-13 13:43:53,537 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 08:45:00] 2026-01-13 13:43:53,555 | INFO     | [payload] control thread has finished
[2026-01-13 08:45:00] 2026-01-13 13:43:53,816 | INFO     | [data] copytool_out thread has finished
[2026-01-13 08:45:00] 2026-01-13 13:43:53,918 | INFO     | [data] copytool_in thread has finished
[2026-01-13 08:45:00] 2026-01-13 13:43:53,925 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 08:45:00] 2026-01-13 13:43:53,958 | INFO     | [job] control thread has finished
[2026-01-13 08:45:00] 2026-01-13 13:43:54,557 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 08:45:00] 2026-01-13 13:43:58,566 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 08:45:00] 2026-01-13 13:44:17,900 | INFO     | 6011s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-13 08:45:00] 2026-01-13 13:44:19,495 | INFO     | PID=3578561 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 08:45:00] 2026-01-13 13:44:19,495 | INFO     | .. there are 48 such processes running
[2026-01-13 08:45:00] 2026-01-13 13:44:19,495 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 08:45:00] 2026-01-13 13:44:19,495 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 08:45:00] 2026-01-13 13:44:19,495 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 08:45:00] 2026-01-13 13:44:51,071 | INFO     | [monitor] cgroup control has ended
[2026-01-13 08:45:00] 2026-01-13 13:44:52,926 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139972409186112)>', '<ExcThread(monitor, started 139971600033536)>']
[2026-01-13 08:45:00] 2026-01-13 13:44:53,720 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 08:45:00] 2026-01-13 13:44:53,720 | INFO     | [monitor] control thread has ended
[2026-01-13 08:45:00] 2026-01-13 13:44:57,969 | INFO     | all workflow threads have been joined
[2026-01-13 08:45:00] 2026-01-13 13:44:57,971 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 08:45:00] 2026-01-13 13:44:57,972 | INFO     | traces error code: 0
[2026-01-13 08:45:00] 2026-01-13 13:44:57,972 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 08:45:00] 2026-01-13 13:45:00,156 [wrapper] ==== pilot stdout END ====
[2026-01-13 08:45:00] 2026-01-13 13:45:00,164 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 08:45:00] 2026-01-13 13:45:00,179 [wrapper] pilotpid: 3578561
[2026-01-13 08:45:00] 2026-01-13 13:45:00,190 [wrapper] Pilot exit status: 0
[2026-01-13 08:45:00] 2026-01-13 13:45:00,250 [wrapper] pandaids: 6968661508
[2026-01-13 08:45:00] 2026-01-13 13:45:00,394 [wrapper] cleanup supervisor_pilot  505218 3578562
[2026-01-13 08:45:00] 2026-01-13 13:45:00,398 [wrapper] Test setup, not cleaning
[2026-01-13 08:45:00] 2026-01-13 13:45:00,417 [wrapper] apfmon messages muted
[2026-01-13 08:45:00] 2026-01-13 13:45:00,437 [wrapper] ==== wrapper stdout END ====
[2026-01-13 08:45:00] 2026-01-13 13:45:00,446 [wrapper] ==== wrapper stderr END ====
[2026-01-13 08:45:00]  *** Error codes and diagnostics ***
[2026-01-13 08:45:00]     "exeErrorCode": 0,
[2026-01-13 08:45:00]     "exeErrorDiag": "",
[2026-01-13 08:45:00]     "pilotErrorCode": 0,
[2026-01-13 08:45:00]     "pilotErrorDiag": "",
[2026-01-13 08:45:00]  *** Listing of results directory ***
[2026-01-13 08:45:00] total 595028
[2026-01-13 08:45:00] -rw-r--r--. 1 boincer umatlas    579449 Jan 13 06:09 pilot3.tar.gz
[2026-01-13 08:45:00] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 07:02 queuedata.json
[2026-01-13 08:45:00] -rwx------. 1 boincer umatlas     36322 Jan 13 07:02 runpilot2-wrapper.sh
[2026-01-13 08:45:00] -rw-r--r--. 1 boincer umatlas       100 Jan 13 07:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 08:45:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 07:03 run_atlas
[2026-01-13 08:45:00] -rw-r--r--. 1 boincer umatlas       105 Jan 13 07:03 job.xml
[2026-01-13 08:45:00] -rw-r--r--. 2 boincer umatlas 319066566 Jan 13 07:03 EVNT.48188524._000001.pool.root.1
[2026-01-13 08:45:00] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 07:03 start_atlas.sh
[2026-01-13 08:45:00] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 07:03 shared
[2026-01-13 08:45:00] -rw-r--r--. 2 boincer umatlas    592417 Jan 13 07:03 input.tar.gz
[2026-01-13 08:45:00] -rw-r--r--. 1 boincer umatlas         0 Jan 13 07:03 boinc_lockfile
[2026-01-13 08:45:00] -rw-r--r--. 1 boincer umatlas      2639 Jan 13 07:03 pandaJob.out
[2026-01-13 08:45:00] -rw-------. 1 boincer umatlas        57 Jan 13 07:03 setup.sh.local
[2026-01-13 08:45:00] -rw-------. 1 boincer umatlas    992677 Jan 13 07:03 agis_schedconf.cvmfs.json
[2026-01-13 08:45:00] -rw-------. 1 boincer umatlas   1516240 Jan 13 07:03 agis_ddmendpoints.agis.ALL.json
[2026-01-13 08:45:00] drwx------. 5 boincer umatlas      4096 Jan 13 07:03 pilot3
[2026-01-13 08:45:00] -rw-r--r--. 1 boincer umatlas      7172 Jan 13 08:39 init_data.xml
[2026-01-13 08:45:00] -rw-------. 1 boincer umatlas 283916380 Jan 13 08:42 HITS.48188528._000019.pool.root.1
[2026-01-13 08:45:00] -rw-r--r--. 1 boincer umatlas       530 Jan 13 08:42 boinc_task_state.xml
[2026-01-13 08:45:00] -rw-------. 1 boincer umatlas      1040 Jan 13 08:43 memory_monitor_summary.json
[2026-01-13 08:45:00] -rw-------. 1 boincer umatlas    411731 Jan 13 08:43 log.48188528._000019.job.log.tgz.1
[2026-01-13 08:45:00] -rw-------. 1 boincer umatlas        95 Jan 13 08:43 pilot_heartbeat.json
[2026-01-13 08:45:00] -rw-------. 1 boincer umatlas      7767 Jan 13 08:43 heartbeat.json
[2026-01-13 08:45:00] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 08:44 boinc_mmap_file
[2026-01-13 08:45:00] -rw-r--r--. 1 boincer umatlas        27 Jan 13 08:44 wrapper_checkpoint.txt
[2026-01-13 08:45:00] -rw-------. 1 boincer umatlas      5126 Jan 13 08:44 pilotlog.txt
[2026-01-13 08:45:00] -rw-------. 1 boincer umatlas    789996 Jan 13 08:45 log.48188528._000019.job.log.1
[2026-01-13 08:45:00] -rw-------. 1 boincer umatlas       357 Jan 13 08:45 output.list
[2026-01-13 08:45:00] -rw-r--r--. 1 boincer umatlas       620 Jan 13 08:45 runtime_log
[2026-01-13 08:45:00] -rw-------. 1 boincer umatlas   1218560 Jan 13 08:45 result.tar.gz
[2026-01-13 08:45:00] -rw-------. 1 boincer umatlas       653 Jan 13 08:45 YKsMDmYHsz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmN5hKDmSZeBsm.diag
[2026-01-13 08:45:00] -rw-r--r--. 1 boincer umatlas      9332 Jan 13 08:45 runtime_log.err
[2026-01-13 08:45:00] -rw-r--r--. 1 boincer umatlas     22384 Jan 13 08:45 stderr.txt
[2026-01-13 08:45:00] HITS file was successfully produced:
[2026-01-13 08:45:00] -rw-------. 1 boincer umatlas 283916380 Jan 13 08:42 shared/HITS.pool.root.1
[2026-01-13 08:45:00]  *** Contents of shared directory: ***
[2026-01-13 08:45:00] total 590652
[2026-01-13 08:45:00] -rw-r--r--. 2 boincer umatlas 319066566 Jan 13 07:03 ATLAS.root_0
[2026-01-13 08:45:00] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 07:03 start_atlas.sh
[2026-01-13 08:45:00] -rw-r--r--. 2 boincer umatlas    592417 Jan 13 07:03 input.tar.gz
[2026-01-13 08:45:00] -rw-------. 1 boincer umatlas 283916380 Jan 13 08:42 HITS.pool.root.1
[2026-01-13 08:45:00] -rw-------. 1 boincer umatlas   1218560 Jan 13 08:45 result.tar.gz
08:45:02 (3556500): run_atlas exited; CPU time 32512.825268
08:45:02 (3556500): called boinc_finish(0)

</stderr_txt>
]]>

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