Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:03:37 (3582406): wrapper (7.7.26015): starting
07:03:37 (3582406): wrapper: running run_atlas (--nthreads 9)
[2026-01-13 07:03:37] Arguments: --nthreads 9
[2026-01-13 07:03:37] Threads: 9
[2026-01-13 07:03:37] Checking for CVMFS
[2026-01-13 07:03:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 07:03:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 07:03:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 07:03:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 07:03:38] 2.13.3.0 10223 99123 243724 155087 0 703 32982184 40960000 36397 16776704 0 1037800793 99.689 856374896 51050 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-13 07:03:38] CVMFS is ok
[2026-01-13 07:03:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 07:03:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 07:03:38] Further information can be found at the LHC@home message board.
[2026-01-13 07:03:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 07:03:38] Checking for apptainer binary...
[2026-01-13 07:03:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 07:03:38] Running /usr/bin/apptainer --version
[2026-01-13 07:03:38] apptainer version 1.4.5-2.el9
[2026-01-13 07:03:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 07:03:38] c8-7-6.aglt2.org
[2026-01-13 07:03:38] apptainer works
[2026-01-13 07:03:38] Set ATHENA_PROC_NUMBER=9
[2026-01-13 07:03:38] Set ATHENA_CORE_NUMBER=9
[2026-01-13 07:03:38] Starting ATLAS job with PandaID=6968661722
[2026-01-13 07:03:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 08:46:22]  *** The last 200 lines of the pilot log: ***
[2026-01-13 08:46:22] 2026-01-13 13:45:35,344 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6968661722/log.48188528._000233.job.log.tgz.1 /tmp/boinchome/slots/2/log.48188528._000233.job
[2026-01-13 08:46:22] 2026-01-13 13:45:35,418 | INFO     | adding to output.list: log.48188528._000233.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/d1/log.48188528._000233.job.log.tg
[2026-01-13 08:46:22] 2026-01-13 13:45:35,418 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-13 08:46:22] 2026-01-13 13:45:35,419 | INFO     | summary of transferred files:
[2026-01-13 08:46:22] 2026-01-13 13:45:35,419 | INFO     |  -- lfn=log.48188528._000233.job.log.tgz.1, status_code=0, status=transferred
[2026-01-13 08:46:22] 2026-01-13 13:45:35,419 | INFO     | stage-out finished correctly
[2026-01-13 08:46:22] 2026-01-13 13:45:35,538 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-13 08:46:22] 2026-01-13 13:45:35,739 | INFO     | job 6968661722 has state=finished
[2026-01-13 08:46:22] 2026-01-13 13:45:35,739 | INFO     | preparing for final server update for job 6968661722 in state='finished'
[2026-01-13 08:46:22] 2026-01-13 13:45:35,739 | INFO     | this job has now completed (state=finished)
[2026-01-13 08:46:22] 2026-01-13 13:45:35,739 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-13 08:46:22] 2026-01-13 13:45:35,739 | INFO     | log transfer has been attempted: DONE
[2026-01-13 08:46:22] 2026-01-13 13:45:35,740 | INFO     | job 6968661722 has finished - writing final server update
[2026-01-13 08:46:22] 2026-01-13 13:45:35,740 | INFO     | total number of processed events: 400 (read)
[2026-01-13 08:46:22] 2026-01-13 13:45:35,740 | INFO     | executing command: lscpu
[2026-01-13 08:46:22] 2026-01-13 13:45:35,836 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 08:46:22] 2026-01-13 13:45:36,597 | WARNING  | process 3675815 can no longer be monitored (due to stat problems) - aborting
[2026-01-13 08:46:22] 2026-01-13 13:45:36,598 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6968661722/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 08:46:22] 2026-01-13 13:45:37,167 | INFO     | time since job start (6096s) is within the limit (349056.0s)
[2026-01-13 08:46:22] 2026-01-13 13:45:37,916 | INFO     | number of running child processes to parent process 3675815: 1
[2026-01-13 08:46:22] 2026-01-13 13:45:37,917 | INFO     | maximum number of monitored processes: 6
[2026-01-13 08:46:22] 2026-01-13 13:45:39,175 | INFO     | time since job start (6098s) is within the limit (349056.0s)
[2026-01-13 08:46:22] 2026-01-13 13:45:39,175 | INFO     | 6100s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-13 08:46:22] 2026-01-13 13:45:40,427 | INFO     | monitor loop #375: job 0:6968661722 is in state 'finished'
[2026-01-13 08:46:22] 2026-01-13 13:45:40,428 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 08:46:22] 2026-01-13 13:45:41,036 | INFO     | PID=3607657 has CPU usage=13.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-13 08:46:22] 2026-01-13 13:45:41,036 | INFO     | .. there are 48 such processes running
[2026-01-13 08:46:22] 2026-01-13 13:45:42,037 | INFO     | time since job start (6101s) is within the limit (349056.0s)
[2026-01-13 08:46:22] 2026-01-13 13:45:42,937 | INFO     | monitor loop #376: job 0:6968661722 is in state 'finished'
[2026-01-13 08:46:22] 2026-01-13 13:45:42,937 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 08:46:22] 2026-01-13 13:45:44,055 | INFO     | time since job start (6103s) is within the limit (349056.0s)
[2026-01-13 08:46:22] 2026-01-13 13:45:45,441 | INFO     | monitor loop #377: job 0:6968661722 is in state 'finished'
[2026-01-13 08:46:22] 2026-01-13 13:45:45,441 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 08:46:22] 2026-01-13 13:45:46,062 | INFO     | time since job start (6105s) is within the limit (349056.0s)
[2026-01-13 08:46:22] 2026-01-13 13:45:47,945 | INFO     | monitor loop #378: job 0:6968661722 is in state 'finished'
[2026-01-13 08:46:22] 2026-01-13 13:45:47,945 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 08:46:22] 2026-01-13 13:45:48,069 | INFO     | time since job start (6107s) is within the limit (349056.0s)
[2026-01-13 08:46:22] 2026-01-13 13:45:48,217 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-13 08:46:22] 2026-01-13 13:45:48,250 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.992499999999
[2026-01-13 08:46:22] 2026-01-13 13:45:48,262 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6968661722/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 08:46:22] 2026-01-13 13:45:48,263 | INFO     | extracted standard info from prmon json
[2026-01-13 08:46:22] 2026-01-13 13:45:48,263 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 08:46:22] 2026-01-13 13:45:48,263 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 08:46:22] 2026-01-13 13:45:48,263 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 08:46:22] 2026-01-13 13:45:48,263 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 08:46:22] 2026-01-13 13:45:48,265 | INFO     | fitting pss+swap vs Time
[2026-01-13 08:46:22] 2026-01-13 13:45:48,265 | INFO     | sum of square deviations: 241443436.30434793
[2026-01-13 08:46:22] 2026-01-13 13:45:48,266 | INFO     | sum of deviations: 1561194411.065217
[2026-01-13 08:46:22] 2026-01-13 13:45:48,266 | INFO     | mean x: 1768308975.5869565
[2026-01-13 08:46:22] 2026-01-13 13:45:48,266 | INFO     | mean y: 2624551.554347826
[2026-01-13 08:46:22] 2026-01-13 13:45:48,266 | INFO     | intersect: -11431416199.269333
[2026-01-13 08:46:22] 2026-01-13 13:45:48,266 | INFO     | chi2: 0.004356524689443383
[2026-01-13 08:46:22] 2026-01-13 13:45:48,266 | INFO     | current memory leak: 6.47 B/s (using 92 data points, chi2=0.00)
[2026-01-13 08:46:22] 2026-01-13 13:45:48,266 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2026-01-13 08:46:22] 2026-01-13 13:45:48,266 | INFO     | ..............................
[2026-01-13 08:46:22] 2026-01-13 13:45:48,266 | INFO     | . Timing measurements:
[2026-01-13 08:46:22] 2026-01-13 13:45:48,266 | INFO     | . get job = 0 s
[2026-01-13 08:46:22] 2026-01-13 13:45:48,267 | INFO     | . initial setup = 2 s
[2026-01-13 08:46:22] 2026-01-13 13:45:48,267 | INFO     | . payload setup = 14 s
[2026-01-13 08:46:22] 2026-01-13 13:45:48,267 | INFO     | . stage-in = 0 s
[2026-01-13 08:46:22] 2026-01-13 13:45:48,267 | INFO     | . payload execution = 6047 s
[2026-01-13 08:46:22] 2026-01-13 13:45:48,267 | INFO     | . stage-out = 1 s
[2026-01-13 08:46:22] 2026-01-13 13:45:48,267 | INFO     | . log creation = 0 s
[2026-01-13 08:46:22] 2026-01-13 13:45:48,267 | INFO     | ..............................
[2026-01-13 08:46:22] 2026-01-13 13:45:48,880 | INFO     | 
[2026-01-13 08:46:22] 2026-01-13 13:45:48,880 | INFO     | job summary report
[2026-01-13 08:46:22] 2026-01-13 13:45:48,880 | INFO     | --------------------------------------------------
[2026-01-13 08:46:22] 2026-01-13 13:45:48,880 | INFO     | PanDA job id: 6968661722
[2026-01-13 08:46:22] 2026-01-13 13:45:48,880 | INFO     | task id: 48188528
[2026-01-13 08:46:22] 2026-01-13 13:45:48,880 | INFO     | errors: (none)
[2026-01-13 08:46:22] 2026-01-13 13:45:48,880 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 08:46:22] 2026-01-13 13:45:48,880 | INFO     | pilot state: finished 
[2026-01-13 08:46:22] 2026-01-13 13:45:48,880 | INFO     | transexitcode: 0
[2026-01-13 08:46:22] 2026-01-13 13:45:48,881 | INFO     | exeerrorcode: 0
[2026-01-13 08:46:22] 2026-01-13 13:45:48,881 | INFO     | exeerrordiag: 
[2026-01-13 08:46:22] 2026-01-13 13:45:48,881 | INFO     | exitcode: 0
[2026-01-13 08:46:22] 2026-01-13 13:45:48,881 | INFO     | exitmsg: OK
[2026-01-13 08:46:22] 2026-01-13 13:45:48,881 | INFO     | cpuconsumptiontime: 32902 s
[2026-01-13 08:46:22] 2026-01-13 13:45:48,881 | INFO     | nevents: 400
[2026-01-13 08:46:22] 2026-01-13 13:45:48,881 | INFO     | neventsw: 0
[2026-01-13 08:46:22] 2026-01-13 13:45:48,881 | INFO     | pid: 3675815
[2026-01-13 08:46:22] 2026-01-13 13:45:48,881 | INFO     | pgrp: 3675815
[2026-01-13 08:46:22] 2026-01-13 13:45:48,881 | INFO     | corecount: 9
[2026-01-13 08:46:22] 2026-01-13 13:45:48,881 | INFO     | event service: False
[2026-01-13 08:46:22] 2026-01-13 13:45:48,881 | INFO     | sizes: {0: 2284138, 10: 2284400, 11: 2284428, 6065: 2311192, 6066: 2311191, 6069: 2320429, 6082: 2320567}
[2026-01-13 08:46:22] 2026-01-13 13:45:48,881 | INFO     | --------------------------------------------------
[2026-01-13 08:46:22] 2026-01-13 13:45:48,881 | INFO     | 
[2026-01-13 08:46:22] 2026-01-13 13:45:48,881 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-13 08:46:22] 2026-01-13 13:45:48,907 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 08:46:22] 2026-01-13 13:45:48,908 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 08:46:22] 2026-01-13 13:45:48,908 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 08:46:22] 2026-01-13 13:45:48,908 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 08:46:22] 2026-01-13 13:45:48,908 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 08:46:22] 2026-01-13 13:45:48,908 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 08:46:22] 2026-01-13 13:45:48,908 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 08:46:22] 2026-01-13 13:45:48,908 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 08:46:22] 2026-01-13 13:45:48,908 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 08:46:22] 2026-01-13 13:45:48,908 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 08:46:22] 2026-01-13 13:45:48,908 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 08:46:22] 2026-01-13 13:45:48,908 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 08:46:22] 2026-01-13 13:45:48,908 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 08:46:22] 2026-01-13 13:45:48,908 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 08:46:22] 2026-01-13 13:45:48,908 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 08:46:22] 2026-01-13 13:45:48,908 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 08:46:22] 2026-01-13 13:45:48,908 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 08:46:22] 2026-01-13 13:45:48,908 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 08:46:22] 2026-01-13 13:45:48,908 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 08:46:22] 2026-01-13 13:45:48,908 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 08:46:22] 2026-01-13 13:45:48,908 | INFO     | job 6968661722 has completed (purged errors)
[2026-01-13 08:46:22] 2026-01-13 13:45:48,909 | INFO     | overall cleanup function is called
[2026-01-13 08:46:22] 2026-01-13 13:45:49,919 | INFO     | --- collectZombieJob: --- 10, [3675815]
[2026-01-13 08:46:22] 2026-01-13 13:45:49,919 | INFO     | zombie collector waiting for pid 3675815
[2026-01-13 08:46:22] 2026-01-13 13:45:49,919 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 08:46:22] 2026-01-13 13:45:49,919 | INFO     | collected zombie processes
[2026-01-13 08:46:22] 2026-01-13 13:45:49,919 | INFO     | will attempt to kill all subprocesses of pid=3675815
[2026-01-13 08:46:22] 2026-01-13 13:45:50,415 | INFO     | process IDs to be killed: [3675815] (in reverse order)
[2026-01-13 08:46:22] 2026-01-13 13:45:50,576 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 08:46:22] 2026-01-13 13:45:50,577 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 08:46:22] 2026-01-13 13:45:50,611 | INFO     | did not find any defunct processes belonging to 3675815
[2026-01-13 08:46:22] 2026-01-13 13:45:50,666 | INFO     | did not find any defunct processes belonging to 3675815
[2026-01-13 08:46:22] 2026-01-13 13:45:50,667 | INFO     | ready for new job
[2026-01-13 08:46:22] 2026-01-13 13:45:50,667 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 08:46:22] 2026-01-13 13:45:50,668 | INFO     | ***************************************
[2026-01-13 08:46:22] 2026-01-13 13:45:50,670 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 08:46:22] 2026-01-13 13:45:50,670 | INFO     | ***************************************
[2026-01-13 08:46:22] 2026-01-13 13:45:50,670 | INFO     | 
[2026-01-13 08:46:22] 2026-01-13 13:45:50,675 | INFO     | architecture information:
[2026-01-13 08:46:22] 2026-01-13 13:45:50,675 | INFO     | executing command: cat /etc/os-release
[2026-01-13 08:46:22] 2026-01-13 13:45:50,740 | INFO     | cat /etc/os-release:
[2026-01-13 08:46:22] NAME="CentOS Linux"
[2026-01-13 08:46:22] VERSION="7 (Core)"
[2026-01-13 08:46:22] ID="centos"
[2026-01-13 08:46:22] ID_LIKE="rhel fedora"
[2026-01-13 08:46:22] VERSION_ID="7"
[2026-01-13 08:46:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 08:46:22] ANSI_COLOR="0;31"
[2026-01-13 08:46:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 08:46:22] HOME_URL="https://www.centos.org/"
[2026-01-13 08:46:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 08:46:22] 
[2026-01-13 08:46:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 08:46:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 08:46:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 08:46:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 08:46:22] 
[2026-01-13 08:46:22] 2026-01-13 13:45:50,741 | INFO     | ***************************************
[2026-01-13 08:46:22] 2026-01-13 13:45:51,244 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-13 08:46:22] 2026-01-13 13:45:51,283 | INFO     | sufficient remaining disk space (170953539584 B)
[2026-01-13 08:46:22] 2026-01-13 13:45:51,283 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 08:46:22] 2026-01-13 13:45:51,284 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 08:46:22] 2026-01-13 13:45:51,284 | INFO     | update_server=False
[2026-01-13 08:46:22] 2026-01-13 13:45:51,284 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 08:46:22] 2026-01-13 13:45:51,285 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 08:46:22] 2026-01-13 13:45:51,292 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 08:46:22] 2026-01-13 13:45:51,457 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 08:46:22] 2026-01-13 13:45:51,457 | INFO     | aborting loop
[2026-01-13 08:46:22] 2026-01-13 13:45:51,473 | INFO     | all job control threads have been joined
[2026-01-13 08:46:22] 2026-01-13 13:45:51,513 | INFO     | all payload control threads have been joined
[2026-01-13 08:46:22] 2026-01-13 13:45:51,552 | INFO     | all data control threads have been joined
[2026-01-13 08:46:22] 2026-01-13 13:45:52,290 | INFO     | [job] retrieve thread has finished
[2026-01-13 08:46:22] 2026-01-13 13:45:52,428 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 08:46:22] 2026-01-13 13:45:52,463 | INFO     | [job] job monitor thread has finished
[2026-01-13 08:46:22] 2026-01-13 13:45:52,479 | INFO     | [job] control thread has finished
[2026-01-13 08:46:22] 2026-01-13 13:45:52,519 | INFO     | [payload] control thread has finished
[2026-01-13 08:46:22] 2026-01-13 13:45:52,558 | INFO     | [data] control thread has finished
[2026-01-13 08:46:22] 2026-01-13 13:45:52,903 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 08:46:22] 2026-01-13 13:45:52,914 | INFO     | [payload] validate_post thread has finished
[2026-01-13 08:46:22] 2026-01-13 13:45:52,960 | INFO     | [data] copytool_in thread has finished
[2026-01-13 08:46:22] 2026-01-13 13:45:52,989 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 08:46:22] 2026-01-13 13:45:53,292 | INFO     | [data] copytool_out thread has finished
[2026-01-13 08:46:22] 2026-01-13 13:45:53,374 | INFO     | [job] validate thread has finished
[2026-01-13 08:46:22] 2026-01-13 13:45:53,419 | INFO     | [payload] failed_post thread has finished
[2026-01-13 08:46:22] 2026-01-13 13:45:53,474 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 08:46:22] 2026-01-13 13:45:53,559 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 08:46:22] 2026-01-13 13:45:54,565 | INFO     | [job] queue monitor thread has finished
[2026-01-13 08:46:22] 2026-01-13 13:45:55,308 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 08:46:22] 2026-01-13 13:46:12,039 | INFO     | [monitor] cgroup control has ended
[2026-01-13 08:46:22] 2026-01-13 13:46:12,244 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140250419005248)>', '<ExcThread(monitor, started 140249262974720)>']
[2026-01-13 08:46:22] 2026-01-13 13:46:17,269 | INFO     | all workflow threads have been joined
[2026-01-13 08:46:22] 2026-01-13 13:46:17,272 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 08:46:22] 2026-01-13 13:46:17,272 | INFO     | traces error code: 0
[2026-01-13 08:46:22] 2026-01-13 13:46:17,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 08:46:22] 2026-01-13 13:46:21,748 | INFO     | PID=3607657 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 08:46:22] 2026-01-13 13:46:21,748 | INFO     | .. there are 48 such processes running
[2026-01-13 08:46:22] 2026-01-13 13:46:21,749 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 08:46:22] 2026-01-13 13:46:21,749 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 08:46:22] 2026-01-13 13:46:21,749 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 08:46:22] 2026-01-13 13:46:21,749 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 08:46:22] 2026-01-13 13:46:21,749 | CRITICAL | thread 'MainThread' is not alive
[2026-01-13 08:46:22] 2026-01-13 13:46:21,749 | INFO     | [monitor] control thread has ended
[2026-01-13 08:46:22] 2026-01-13 13:46:21,876 [wrapper] ==== pilot stdout END ====
[2026-01-13 08:46:22] 2026-01-13 13:46:21,880 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 08:46:22] 2026-01-13 13:46:21,884 [wrapper] pilotpid: 3607657
[2026-01-13 08:46:22] 2026-01-13 13:46:21,890 [wrapper] Pilot exit status: 0
[2026-01-13 08:46:22] 2026-01-13 13:46:21,910 [wrapper] pandaids: 6968661722
[2026-01-13 08:46:22] 2026-01-13 13:46:22,029 [wrapper] cleanup supervisor_pilot  509622 3607658
[2026-01-13 08:46:22] 2026-01-13 13:46:22,037 [wrapper] Test setup, not cleaning
[2026-01-13 08:46:22] 2026-01-13 13:46:22,042 [wrapper] apfmon messages muted
[2026-01-13 08:46:22] 2026-01-13 13:46:22,056 [wrapper] ==== wrapper stdout END ====
[2026-01-13 08:46:22] 2026-01-13 13:46:22,069 [wrapper] ==== wrapper stderr END ====
[2026-01-13 08:46:22]  *** Error codes and diagnostics ***
[2026-01-13 08:46:22]     "exeErrorCode": 0,
[2026-01-13 08:46:22]     "exeErrorDiag": "",
[2026-01-13 08:46:22]     "pilotErrorCode": 0,
[2026-01-13 08:46:22]     "pilotErrorDiag": "",
[2026-01-13 08:46:22]  *** Listing of results directory ***
[2026-01-13 08:46:22] total 591664
[2026-01-13 08:46:22] -rw-r--r--. 1 boincer umatlas    579449 Jan 13 06:09 pilot3.tar.gz
[2026-01-13 08:46:22] -rwx------. 1 boincer umatlas     36322 Jan 13 07:02 runpilot2-wrapper.sh
[2026-01-13 08:46:22] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 07:02 queuedata.json
[2026-01-13 08:46:22] -rw-r--r--. 1 boincer umatlas       100 Jan 13 07:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 08:46:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 07:03 run_atlas
[2026-01-13 08:46:22] -rw-r--r--. 1 boincer umatlas       105 Jan 13 07:03 job.xml
[2026-01-13 08:46:22] -rw-r--r--. 2 boincer umatlas 318546215 Jan 13 07:03 EVNT.48188524._000010.pool.root.1
[2026-01-13 08:46:22] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 07:03 start_atlas.sh
[2026-01-13 08:46:22] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 07:03 shared
[2026-01-13 08:46:22] -rw-r--r--. 2 boincer umatlas    592418 Jan 13 07:03 input.tar.gz
[2026-01-13 08:46:22] -rw-r--r--. 1 boincer umatlas         0 Jan 13 07:03 boinc_lockfile
[2026-01-13 08:46:22] -rw-r--r--. 1 boincer umatlas      2642 Jan 13 07:03 pandaJob.out
[2026-01-13 08:46:22] -rw-------. 1 boincer umatlas        57 Jan 13 07:03 setup.sh.local
[2026-01-13 08:46:22] -rw-------. 1 boincer umatlas    992677 Jan 13 07:03 agis_schedconf.cvmfs.json
[2026-01-13 08:46:22] -rw-------. 1 boincer umatlas   1516240 Jan 13 07:04 agis_ddmendpoints.agis.ALL.json
[2026-01-13 08:46:22] drwx------. 5 boincer umatlas      4096 Jan 13 07:04 pilot3
[2026-01-13 08:46:22] -rw-r--r--. 1 boincer umatlas      7172 Jan 13 08:39 init_data.xml
[2026-01-13 08:46:22] -rw-------. 1 boincer umatlas 280995688 Jan 13 08:44 HITS.48188528._000233.pool.root.1
[2026-01-13 08:46:22] -rw-r--r--. 1 boincer umatlas       529 Jan 13 08:44 boinc_task_state.xml
[2026-01-13 08:46:22] -rw-------. 1 boincer umatlas      1043 Jan 13 08:45 memory_monitor_summary.json
[2026-01-13 08:46:22] -rw-------. 1 boincer umatlas    396500 Jan 13 08:45 log.48188528._000233.job.log.tgz.1
[2026-01-13 08:46:22] -rw-------. 1 boincer umatlas      7769 Jan 13 08:45 heartbeat.json
[2026-01-13 08:46:22] -rw-r--r--. 1 boincer umatlas        27 Jan 13 08:46 wrapper_checkpoint.txt
[2026-01-13 08:46:22] -rw-------. 1 boincer umatlas        95 Jan 13 08:46 pilot_heartbeat.json
[2026-01-13 08:46:22] -rw-------. 1 boincer umatlas       893 Jan 13 08:46 pilotlog.txt
[2026-01-13 08:46:22] -rw-------. 1 boincer umatlas    805310 Jan 13 08:46 log.48188528._000233.job.log.1
[2026-01-13 08:46:22] -rw-------. 1 boincer umatlas       357 Jan 13 08:46 output.list
[2026-01-13 08:46:22] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 08:46 boinc_mmap_file
[2026-01-13 08:46:22] -rw-r--r--. 1 boincer umatlas       620 Jan 13 08:46 runtime_log
[2026-01-13 08:46:22] -rw-------. 1 boincer umatlas   1218560 Jan 13 08:46 result.tar.gz
[2026-01-13 08:46:22] -rw-r--r--. 1 boincer umatlas      9332 Jan 13 08:46 runtime_log.err
[2026-01-13 08:46:22] -rw-------. 1 boincer umatlas       653 Jan 13 08:46 RmbNDmYHsz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbznKDmeTnATm.diag
[2026-01-13 08:46:22] -rw-r--r--. 1 boincer umatlas     22290 Jan 13 08:46 stderr.txt
[2026-01-13 08:46:22] HITS file was successfully produced:
[2026-01-13 08:46:22] -rw-------. 1 boincer umatlas 280995688 Jan 13 08:44 shared/HITS.pool.root.1
[2026-01-13 08:46:22]  *** Contents of shared directory: ***
[2026-01-13 08:46:22] total 587292
[2026-01-13 08:46:22] -rw-r--r--. 2 boincer umatlas 318546215 Jan 13 07:03 ATLAS.root_0
[2026-01-13 08:46:22] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 07:03 start_atlas.sh
[2026-01-13 08:46:22] -rw-r--r--. 2 boincer umatlas    592418 Jan 13 07:03 input.tar.gz
[2026-01-13 08:46:22] -rw-------. 1 boincer umatlas 280995688 Jan 13 08:44 HITS.pool.root.1
[2026-01-13 08:46:22] -rw-------. 1 boincer umatlas   1218560 Jan 13 08:46 result.tar.gz
08:46:24 (3582406): run_atlas exited; CPU time 33040.981076
08:46:24 (3582406): called boinc_finish(0)

</stderr_txt>
]]>

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