Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:14:06 (2512763): wrapper (7.7.26015): starting
05:14:06 (2512763): wrapper: running run_atlas (--nthreads 9)
[2026-01-13 05:14:06] Arguments: --nthreads 9
[2026-01-13 05:14:06] Threads: 9
[2026-01-13 05:14:06] Checking for CVMFS
[2026-01-13 05:14:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 05:14:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 05:14:06] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 05:14:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 05:14:07] 2.13.3.0 7433 28508 203628 155084 1 75 25936673 40960001 22930 16776704 0 79390524 99.668 71924479 39249 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-13 05:14:07] CVMFS is ok
[2026-01-13 05:14:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 05:14:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 05:14:07] Further information can be found at the LHC@home message board.
[2026-01-13 05:14:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 05:14:07] Checking for apptainer binary...
[2026-01-13 05:14:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 05:14:07] Running /usr/bin/apptainer --version
[2026-01-13 05:14:07] apptainer version 1.4.5-2.el9
[2026-01-13 05:14:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 05:14:07] c-212-16.aglt2.org
[2026-01-13 05:14:07] apptainer works
[2026-01-13 05:14:07] Set ATHENA_PROC_NUMBER=9
[2026-01-13 05:14:07] Set ATHENA_CORE_NUMBER=9
[2026-01-13 05:14:07] Starting ATLAS job with PandaID=6962918145
[2026-01-13 05:14:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 07:15:34]  *** The last 200 lines of the pilot log: ***
[2026-01-13 07:15:34] 2026-01-13 12:14:34,655 | INFO     | time since job start (7217s) is within the limit (174528.0s)
[2026-01-13 07:15:34] 2026-01-13 12:14:36,660 | INFO     | time since job start (7219s) is within the limit (174528.0s)
[2026-01-13 07:15:34] 2026-01-13 12:14:37,139 | WARNING  | process 2547911 can no longer be monitored (due to stat problems) - aborting
[2026-01-13 07:15:34] 2026-01-13 12:14:37,139 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6962918145/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 07:15:34] 2026-01-13 12:14:37,465 | INFO     | number of running child processes to parent process 2547911: 1
[2026-01-13 07:15:34] 2026-01-13 12:14:37,465 | INFO     | maximum number of monitored processes: 6
[2026-01-13 07:15:34] 2026-01-13 12:14:37,570 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 07:15:34] 2026-01-13 12:14:37,580 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3315.9459687500016
[2026-01-13 07:15:34] 2026-01-13 12:14:37,592 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6962918145/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 07:15:34] 2026-01-13 12:14:37,592 | INFO     | extracted standard info from prmon json
[2026-01-13 07:15:34] 2026-01-13 12:14:37,592 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 07:15:34] 2026-01-13 12:14:37,592 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 07:15:34] 2026-01-13 12:14:37,592 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 07:15:34] 2026-01-13 12:14:37,593 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 07:15:34] 2026-01-13 12:14:37,594 | INFO     | fitting pss+swap vs Time
[2026-01-13 07:15:34] 2026-01-13 12:14:37,594 | INFO     | sum of square deviations: 509440249.5
[2026-01-13 07:15:34] 2026-01-13 12:14:37,595 | INFO     | sum of deviations: 44119254578.49999
[2026-01-13 07:15:34] 2026-01-13 12:14:37,595 | INFO     | mean x: 1768302851.5
[2026-01-13 07:15:34] 2026-01-13 12:14:37,595 | INFO     | mean y: 2455026.838983051
[2026-01-13 07:15:34] 2026-01-13 12:14:37,595 | INFO     | intersect: -153138573295.49417
[2026-01-13 07:15:34] 2026-01-13 12:14:37,595 | INFO     | chi2: 1.6930899574259501
[2026-01-13 07:15:34] 2026-01-13 12:14:37,595 | INFO     | sum of square deviations: 447383272.0
[2026-01-13 07:15:34] 2026-01-13 12:14:37,596 | INFO     | sum of deviations: 41925901276.999985
[2026-01-13 07:15:34] 2026-01-13 12:14:37,596 | INFO     | mean x: 1768302699.0
[2026-01-13 07:15:34] 2026-01-13 12:14:37,596 | INFO     | mean y: 2449633.610619469
[2026-01-13 07:15:34] 2026-01-13 12:14:37,596 | INFO     | intersect: -165711579088.7834
[2026-01-13 07:15:34] 2026-01-13 12:14:37,596 | INFO     | chi2: 1.675042453115504
[2026-01-13 07:15:34] 2026-01-13 12:14:37,596 | INFO     | current chi2=1.675042453115504 (change=1.0659507034041071 %)
[2026-01-13 07:15:34] 2026-01-13 12:14:37,596 | INFO     | right removable region: 112
[2026-01-13 07:15:34] 2026-01-13 12:14:37,596 | INFO     | sum of square deviations: 447383272.0
[2026-01-13 07:15:34] 2026-01-13 12:14:37,596 | INFO     | sum of deviations: 23013310363.0
[2026-01-13 07:15:34] 2026-01-13 12:14:37,597 | INFO     | mean x: 1768303004.0
[2026-01-13 07:15:34] 2026-01-13 12:14:37,597 | INFO     | mean y: 2506262.371681416
[2026-01-13 07:15:34] 2026-01-13 12:14:37,597 | INFO     | intersect: -90958663709.30582
[2026-01-13 07:15:34] 2026-01-13 12:14:37,597 | INFO     | chi2: 0.24731904739454127
[2026-01-13 07:15:34] 2026-01-13 12:14:37,597 | INFO     | current chi2=0.24731904739454127 (change=85.3924449607777 %)
[2026-01-13 07:15:34] 2026-01-13 12:14:37,597 | INFO     | sum of square deviations: 390582207.0
[2026-01-13 07:15:34] 2026-01-13 12:14:37,597 | INFO     | sum of deviations: 17007629172.999998
[2026-01-13 07:15:34] 2026-01-13 12:14:37,597 | INFO     | mean x: 1768303156.5
[2026-01-13 07:15:34] 2026-01-13 12:14:37,597 | INFO     | mean y: 2522375.685185185
[2026-01-13 07:15:34] 2026-01-13 12:14:37,597 | INFO     | intersect: -76997002467.48665
[2026-01-13 07:15:34] 2026-01-13 12:14:37,598 | INFO     | chi2: 0.21091871898592718
[2026-01-13 07:15:34] 2026-01-13 12:14:37,598 | INFO     | current chi2=0.21091871898592718 (change=14.71796401938491 %)
[2026-01-13 07:15:34] 2026-01-13 12:14:37,598 | INFO     | left removable region: 20
[2026-01-13 07:15:34] 2026-01-13 12:14:37,598 | INFO     | sum of square deviations: 241429643.0
[2026-01-13 07:15:34] 2026-01-13 12:14:37,598 | INFO     | sum of deviations: 5194184953.0
[2026-01-13 07:15:34] 2026-01-13 12:14:37,598 | INFO     | mean x: 1768303278.5
[2026-01-13 07:15:34] 2026-01-13 12:14:37,598 | INFO     | mean y: 2556666.4782608696
[2026-01-13 07:15:34] 2026-01-13 12:14:37,598 | INFO     | intersect: -38041215288.75454
[2026-01-13 07:15:34] 2026-01-13 12:14:37,598 | INFO     | chi2: 0.08635496159355195
[2026-01-13 07:15:34] 2026-01-13 12:14:37,599 | INFO     | current memory leak: 21.51 B/s (using 92 data points, chi2=0.09)
[2026-01-13 07:15:34] 2026-01-13 12:14:37,599 | INFO     | could have reported an average CPU frequency of 3343 MHz (7 samples)
[2026-01-13 07:15:34] 2026-01-13 12:14:37,599 | INFO     | ..............................
[2026-01-13 07:15:34] 2026-01-13 12:14:37,599 | INFO     | . Timing measurements:
[2026-01-13 07:15:34] 2026-01-13 12:14:37,599 | INFO     | . get job = 0 s
[2026-01-13 07:15:34] 2026-01-13 12:14:37,599 | INFO     | . initial setup = 2 s
[2026-01-13 07:15:34] 2026-01-13 12:14:37,599 | INFO     | . payload setup = 5 s
[2026-01-13 07:15:34] 2026-01-13 12:14:37,599 | INFO     | . stage-in = 0 s
[2026-01-13 07:15:34] 2026-01-13 12:14:37,599 | INFO     | . payload execution = 7190 s
[2026-01-13 07:15:34] 2026-01-13 12:14:37,599 | INFO     | . stage-out = 0 s
[2026-01-13 07:15:34] 2026-01-13 12:14:37,599 | INFO     | . log creation = 0 s
[2026-01-13 07:15:34] 2026-01-13 12:14:37,599 | INFO     | ..............................
[2026-01-13 07:15:34] 2026-01-13 12:14:37,658 | INFO     | 
[2026-01-13 07:15:34] 2026-01-13 12:14:37,658 | INFO     | job summary report
[2026-01-13 07:15:34] 2026-01-13 12:14:37,658 | INFO     | --------------------------------------------------
[2026-01-13 07:15:34] 2026-01-13 12:14:37,658 | INFO     | PanDA job id: 6962918145
[2026-01-13 07:15:34] 2026-01-13 12:14:37,658 | INFO     | task id: 47898826
[2026-01-13 07:15:34] 2026-01-13 12:14:37,658 | INFO     | errors: (none)
[2026-01-13 07:15:34] 2026-01-13 12:14:37,658 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 07:15:34] 2026-01-13 12:14:37,658 | INFO     | pilot state: finished 
[2026-01-13 07:15:34] 2026-01-13 12:14:37,659 | INFO     | transexitcode: 0
[2026-01-13 07:15:34] 2026-01-13 12:14:37,659 | INFO     | exeerrorcode: 0
[2026-01-13 07:15:34] 2026-01-13 12:14:37,659 | INFO     | exeerrordiag: 
[2026-01-13 07:15:34] 2026-01-13 12:14:37,659 | INFO     | exitcode: 0
[2026-01-13 07:15:34] 2026-01-13 12:14:37,659 | INFO     | exitmsg: OK
[2026-01-13 07:15:34] 2026-01-13 12:14:37,659 | INFO     | cpuconsumptiontime: 43963 s
[2026-01-13 07:15:34] 2026-01-13 12:14:37,659 | INFO     | nevents: 400
[2026-01-13 07:15:34] 2026-01-13 12:14:37,659 | INFO     | neventsw: 0
[2026-01-13 07:15:34] 2026-01-13 12:14:37,659 | INFO     | pid: 2547911
[2026-01-13 07:15:34] 2026-01-13 12:14:37,659 | INFO     | pgrp: 2547911
[2026-01-13 07:15:34] 2026-01-13 12:14:37,659 | INFO     | corecount: 9
[2026-01-13 07:15:34] 2026-01-13 12:14:37,659 | INFO     | event service: False
[2026-01-13 07:15:34] 2026-01-13 12:14:37,659 | INFO     | sizes: {0: 2283969, 5: 2284231, 11: 2284287, 7199: 2311593, 7200: 2320647, 7205: 2320785}
[2026-01-13 07:15:34] 2026-01-13 12:14:37,659 | INFO     | --------------------------------------------------
[2026-01-13 07:15:34] 2026-01-13 12:14:37,659 | INFO     | 
[2026-01-13 07:15:34] 2026-01-13 12:14:37,659 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-13 07:15:34] 2026-01-13 12:14:37,678 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 07:15:34] 2026-01-13 12:14:37,679 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 07:15:34] 2026-01-13 12:14:37,679 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 07:15:34] 2026-01-13 12:14:37,679 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 07:15:34] 2026-01-13 12:14:37,679 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 07:15:34] 2026-01-13 12:14:37,679 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 07:15:34] 2026-01-13 12:14:37,679 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 07:15:34] 2026-01-13 12:14:37,679 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 07:15:34] 2026-01-13 12:14:37,679 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 07:15:34] 2026-01-13 12:14:37,679 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 07:15:34] 2026-01-13 12:14:37,679 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 07:15:34] 2026-01-13 12:14:37,679 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 07:15:34] 2026-01-13 12:14:37,679 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 07:15:34] 2026-01-13 12:14:37,679 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 07:15:34] 2026-01-13 12:14:37,679 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 07:15:34] 2026-01-13 12:14:37,679 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 07:15:34] 2026-01-13 12:14:37,679 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 07:15:34] 2026-01-13 12:14:37,680 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 07:15:34] 2026-01-13 12:14:37,680 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 07:15:34] 2026-01-13 12:14:37,680 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 07:15:34] 2026-01-13 12:14:37,680 | INFO     | job 6962918145 has completed (purged errors)
[2026-01-13 07:15:34] 2026-01-13 12:14:37,680 | INFO     | overall cleanup function is called
[2026-01-13 07:15:34] 2026-01-13 12:14:38,688 | INFO     | --- collectZombieJob: --- 10, [2547911]
[2026-01-13 07:15:34] 2026-01-13 12:14:38,688 | INFO     | zombie collector waiting for pid 2547911
[2026-01-13 07:15:34] 2026-01-13 12:14:38,688 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 07:15:34] 2026-01-13 12:14:38,688 | INFO     | collected zombie processes
[2026-01-13 07:15:34] 2026-01-13 12:14:38,688 | INFO     | will attempt to kill all subprocesses of pid=2547911
[2026-01-13 07:15:34] 2026-01-13 12:14:39,088 | INFO     | process IDs to be killed: [2547911] (in reverse order)
[2026-01-13 07:15:34] 2026-01-13 12:14:39,233 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 07:15:34] 2026-01-13 12:14:39,233 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 07:15:34] 2026-01-13 12:14:39,249 | INFO     | did not find any defunct processes belonging to 2547911
[2026-01-13 07:15:34] 2026-01-13 12:14:39,265 | INFO     | did not find any defunct processes belonging to 2547911
[2026-01-13 07:15:34] 2026-01-13 12:14:39,265 | INFO     | ready for new job
[2026-01-13 07:15:34] 2026-01-13 12:14:39,265 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 07:15:34] 2026-01-13 12:14:39,267 | INFO     | ***************************************
[2026-01-13 07:15:34] 2026-01-13 12:14:39,267 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 07:15:34] 2026-01-13 12:14:39,267 | INFO     | ***************************************
[2026-01-13 07:15:34] 2026-01-13 12:14:39,267 | INFO     | 
[2026-01-13 07:15:34] 2026-01-13 12:14:39,271 | INFO     | architecture information:
[2026-01-13 07:15:34] 2026-01-13 12:14:39,272 | INFO     | executing command: cat /etc/os-release
[2026-01-13 07:15:34] 2026-01-13 12:14:39,288 | INFO     | cat /etc/os-release:
[2026-01-13 07:15:34] NAME="CentOS Linux"
[2026-01-13 07:15:34] VERSION="7 (Core)"
[2026-01-13 07:15:34] ID="centos"
[2026-01-13 07:15:34] ID_LIKE="rhel fedora"
[2026-01-13 07:15:34] VERSION_ID="7"
[2026-01-13 07:15:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 07:15:34] ANSI_COLOR="0;31"
[2026-01-13 07:15:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 07:15:34] HOME_URL="https://www.centos.org/"
[2026-01-13 07:15:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 07:15:34] 
[2026-01-13 07:15:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 07:15:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 07:15:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 07:15:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 07:15:34] 
[2026-01-13 07:15:34] 2026-01-13 12:14:39,288 | INFO     | ***************************************
[2026-01-13 07:15:34] 2026-01-13 12:14:39,791 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-13 07:15:34] 2026-01-13 12:14:39,809 | INFO     | sufficient remaining disk space (127622184960 B)
[2026-01-13 07:15:34] 2026-01-13 12:14:39,810 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 07:15:34] 2026-01-13 12:14:39,810 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 07:15:34] 2026-01-13 12:14:39,810 | INFO     | update_server=False
[2026-01-13 07:15:34] 2026-01-13 12:14:39,810 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 07:15:34] 2026-01-13 12:14:39,810 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 07:15:34] 2026-01-13 12:14:39,974 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-13 07:15:34] 2026-01-13 12:14:39,974 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-13 07:15:34] 2026-01-13 12:14:39,974 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 07:15:34] 2026-01-13 12:14:39,975 | INFO     | will abort loop
[2026-01-13 07:15:34] 2026-01-13 12:14:40,013 | INFO     | all data control threads have been joined
[2026-01-13 07:15:34] 2026-01-13 12:14:40,374 | INFO     | all payload control threads have been joined
[2026-01-13 07:15:34] 2026-01-13 12:14:40,620 | INFO     | all job control threads have been joined
[2026-01-13 07:15:34] 2026-01-13 12:14:40,801 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 07:15:34] 2026-01-13 12:14:40,815 | INFO     | [job] retrieve thread has finished
[2026-01-13 07:15:34] 2026-01-13 12:14:40,887 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 07:15:34] 2026-01-13 12:14:40,980 | INFO     | [job] job monitor thread has finished
[2026-01-13 07:15:34] 2026-01-13 12:14:41,018 | INFO     | [data] control thread has finished
[2026-01-13 07:15:34] 2026-01-13 12:14:41,089 | INFO     | [payload] validate_post thread has finished
[2026-01-13 07:15:34] 2026-01-13 12:14:41,167 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 07:15:34] 2026-01-13 12:14:41,183 | INFO     | [job] validate thread has finished
[2026-01-13 07:15:34] 2026-01-13 12:14:41,380 | INFO     | [payload] control thread has finished
[2026-01-13 07:15:34] 2026-01-13 12:14:41,478 | INFO     | [payload] failed_post thread has finished
[2026-01-13 07:15:34] 2026-01-13 12:14:41,625 | INFO     | [job] control thread has finished
[2026-01-13 07:15:34] 2026-01-13 12:14:42,015 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 07:15:34] 2026-01-13 12:14:42,204 | INFO     | [data] copytool_in thread has finished
[2026-01-13 07:15:34] 2026-01-13 12:14:42,669 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 07:15:34] 2026-01-13 12:14:42,807 | INFO     | [data] copytool_out thread has finished
[2026-01-13 07:15:34] 2026-01-13 12:14:43,674 | INFO     | [job] queue monitor thread has finished
[2026-01-13 07:15:34] 2026-01-13 12:14:43,817 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 07:15:34] 2026-01-13 12:14:50,750 | INFO     | job.realtimelogging is not enabled
[2026-01-13 07:15:34] 2026-01-13 12:14:51,756 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 07:15:34] 2026-01-13 12:15:10,193 | INFO     | PID=2520406 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 07:15:34] 2026-01-13 12:15:10,194 | INFO     | .. there are 22 such processes running
[2026-01-13 07:15:34] 2026-01-13 12:15:10,194 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 07:15:34] 2026-01-13 12:15:10,194 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 07:15:34] 2026-01-13 12:15:10,194 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 07:15:34] 2026-01-13 12:15:29,197 | INFO     | [monitor] cgroup control has ended
[2026-01-13 07:15:34] 2026-01-13 12:15:29,562 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140453839583040)>', '<ExcThread(monitor, started 140453458462464)>']
[2026-01-13 07:15:34] 2026-01-13 12:15:30,307 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 07:15:34] 2026-01-13 12:15:30,307 | INFO     | [monitor] control thread has ended
[2026-01-13 07:15:34] 2026-01-13 12:15:34,587 | INFO     | all workflow threads have been joined
[2026-01-13 07:15:34] 2026-01-13 12:15:34,587 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 07:15:34] 2026-01-13 12:15:34,587 | INFO     | traces error code: 0
[2026-01-13 07:15:34] 2026-01-13 12:15:34,588 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 07:15:34] 2026-01-13 12:15:34,726 [wrapper] ==== pilot stdout END ====
[2026-01-13 07:15:34] 2026-01-13 12:15:34,728 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 07:15:34] 2026-01-13 12:15:34,731 [wrapper] pilotpid: 2520406
[2026-01-13 07:15:34] 2026-01-13 12:15:34,734 [wrapper] Pilot exit status: 0
[2026-01-13 07:15:34] 2026-01-13 12:15:34,753 [wrapper] pandaids: 6962918145
[2026-01-13 07:15:34] 2026-01-13 12:15:34,861 [wrapper] cleanup supervisor_pilot 3088393 2520407
[2026-01-13 07:15:34] 2026-01-13 12:15:34,865 [wrapper] Test setup, not cleaning
[2026-01-13 07:15:34] 2026-01-13 12:15:34,868 [wrapper] apfmon messages muted
[2026-01-13 07:15:34] 2026-01-13 12:15:34,870 [wrapper] ==== wrapper stdout END ====
[2026-01-13 07:15:34] 2026-01-13 12:15:34,872 [wrapper] ==== wrapper stderr END ====
[2026-01-13 07:15:34]  *** Error codes and diagnostics ***
[2026-01-13 07:15:34]     "exeErrorCode": 0,
[2026-01-13 07:15:34]     "exeErrorDiag": "",
[2026-01-13 07:15:34]     "pilotErrorCode": 0,
[2026-01-13 07:15:34]     "pilotErrorDiag": "",
[2026-01-13 07:15:34]  *** Listing of results directory ***
[2026-01-13 07:15:34] total 449096
[2026-01-13 07:15:34] -rwx------. 1 boincer umatlas     36322 Jan  8 03:06 runpilot2-wrapper.sh
[2026-01-13 07:15:34] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:11 queuedata.json
[2026-01-13 07:15:34] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 03:11 pilot3.tar.gz
[2026-01-13 07:15:34] -rw-r--r--. 1 boincer umatlas       100 Jan 13 05:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 07:15:34] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 05:14 run_atlas
[2026-01-13 07:15:34] -rw-r--r--. 1 boincer umatlas       105 Jan 13 05:14 job.xml
[2026-01-13 07:15:34] -rw-r--r--. 2 boincer umatlas 225931031 Jan 13 05:14 EVNT.47898824._000784.pool.root.1
[2026-01-13 07:15:34] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 05:14 start_atlas.sh
[2026-01-13 07:15:34] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 05:14 shared
[2026-01-13 07:15:34] -rw-r--r--. 2 boincer umatlas    592402 Jan 13 05:14 input.tar.gz
[2026-01-13 07:15:34] -rw-r--r--. 1 boincer umatlas         0 Jan 13 05:14 boinc_lockfile
[2026-01-13 07:15:34] -rw-r--r--. 1 boincer umatlas      2519 Jan 13 05:14 pandaJob.out
[2026-01-13 07:15:34] -rw-------. 1 boincer umatlas        57 Jan 13 05:14 setup.sh.local
[2026-01-13 07:15:34] -rw-------. 1 boincer umatlas    993000 Jan 13 05:14 agis_schedconf.cvmfs.json
[2026-01-13 07:15:34] -rw-------. 1 boincer umatlas   1516240 Jan 13 05:14 agis_ddmendpoints.agis.ALL.json
[2026-01-13 07:15:34] drwx------. 5 boincer umatlas      4096 Jan 13 05:14 pilot3
[2026-01-13 07:15:34] -rw-r--r--. 1 boincer umatlas      6954 Jan 13 07:13 init_data.xml
[2026-01-13 07:15:34] -rw-------. 1 boincer umatlas 227198132 Jan 13 07:13 HITS.47898826._020216.pool.root.1
[2026-01-13 07:15:34] -rw-r--r--. 1 boincer umatlas       530 Jan 13 07:13 boinc_task_state.xml
[2026-01-13 07:15:34] -rw-------. 1 boincer umatlas      1033 Jan 13 07:14 memory_monitor_summary.json
[2026-01-13 07:15:34] -rw-------. 1 boincer umatlas    383393 Jan 13 07:14 log.47898826._020216.job.log.tgz.1
[2026-01-13 07:15:34] -rw-------. 1 boincer umatlas      7769 Jan 13 07:14 heartbeat.json
[2026-01-13 07:15:34] -rw-------. 1 boincer umatlas        95 Jan 13 07:14 pilot_heartbeat.json
[2026-01-13 07:15:34] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 07:15 boinc_mmap_file
[2026-01-13 07:15:34] -rw-r--r--. 1 boincer umatlas        27 Jan 13 07:15 wrapper_checkpoint.txt
[2026-01-13 07:15:34] -rw-------. 1 boincer umatlas      5083 Jan 13 07:15 pilotlog.txt
[2026-01-13 07:15:34] -rw-------. 1 boincer umatlas   1026259 Jan 13 07:15 log.47898826._020216.job.log.1
[2026-01-13 07:15:34] -rw-------. 1 boincer umatlas       357 Jan 13 07:15 output.list
[2026-01-13 07:15:34] -rw-r--r--. 1 boincer umatlas       620 Jan 13 07:15 runtime_log
[2026-01-13 07:15:34] -rw-------. 1 boincer umatlas   1433600 Jan 13 07:15 result.tar.gz
[2026-01-13 07:15:34] -rw-r--r--. 1 boincer umatlas      9342 Jan 13 07:15 runtime_log.err
[2026-01-13 07:15:34] -rw-------. 1 boincer umatlas       652 Jan 13 07:15 0bANDmYD0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQojKDmk5POJo.diag
[2026-01-13 07:15:34] -rw-r--r--. 1 boincer umatlas     21258 Jan 13 07:15 stderr.txt
[2026-01-13 07:15:34] HITS file was successfully produced:
[2026-01-13 07:15:34] -rw-------. 1 boincer umatlas 227198132 Jan 13 07:13 shared/HITS.pool.root.1
[2026-01-13 07:15:34]  *** Contents of shared directory: ***
[2026-01-13 07:15:34] total 444516
[2026-01-13 07:15:34] -rw-r--r--. 2 boincer umatlas 225931031 Jan 13 05:14 ATLAS.root_0
[2026-01-13 07:15:34] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 05:14 start_atlas.sh
[2026-01-13 07:15:34] -rw-r--r--. 2 boincer umatlas    592402 Jan 13 05:14 input.tar.gz
[2026-01-13 07:15:34] -rw-------. 1 boincer umatlas 227198132 Jan 13 07:13 HITS.pool.root.1
[2026-01-13 07:15:34] -rw-------. 1 boincer umatlas   1433600 Jan 13 07:15 result.tar.gz
07:15:36 (2512763): run_atlas exited; CPU time 44146.890338
07:15:36 (2512763): called boinc_finish(0)

</stderr_txt>
]]>

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