Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:38:40 (26367): wrapper (7.7.26015): starting
01:38:40 (26367): wrapper: running run_atlas (--nthreads 12)
[2026-01-13 01:38:40] Arguments: --nthreads 12
[2026-01-13 01:38:40] Threads: 12
[2026-01-13 01:38:40] Checking for CVMFS
[2026-01-13 01:38:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 01:38:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 01:38:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 01:38:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 01:38:40] 2.11.2.0 2947 356406 96264 155079 0 1 19529567 20275201 1 130560 1 150863913 99.953 20990561 14831 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-13 01:38:40] CVMFS is ok
[2026-01-13 01:38:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 01:38:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 01:38:40] Further information can be found at the LHC@home message board.
[2026-01-13 01:38:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 01:38:40] Checking for apptainer binary...
[2026-01-13 01:38:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 01:38:40] Running /usr/bin/apptainer --version
[2026-01-13 01:38:40] apptainer version 1.3.2-1.el7
[2026-01-13 01:38:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 01:38:42] c-205-18.aglt2.org
[2026-01-13 01:38:42] apptainer works
[2026-01-13 01:38:42] Set ATHENA_PROC_NUMBER=12
[2026-01-13 01:38:42] Set ATHENA_CORE_NUMBER=12
[2026-01-13 01:38:42] Starting ATLAS job with PandaID=6968277421
[2026-01-13 01:38:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 03:24:13]  *** The last 200 lines of the pilot log: ***
[2026-01-13 03:24:13] 2026-01-13 08:23:34,063 | INFO     | time since job start (6277s) is within the limit (349056.0s)
[2026-01-13 03:24:13] 2026-01-13 08:23:34,135 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-13 03:24:13] 2026-01-13 08:23:34,139 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2026-01-13 03:24:13] 2026-01-13 08:23:34,140 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6968277421/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 03:24:13] 2026-01-13 08:23:34,141 | INFO     | extracted standard info from prmon json
[2026-01-13 03:24:13] 2026-01-13 08:23:34,141 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 03:24:13] 2026-01-13 08:23:34,141 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 03:24:13] 2026-01-13 08:23:34,141 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 03:24:13] 2026-01-13 08:23:34,141 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 03:24:13] 2026-01-13 08:23:34,143 | INFO     | fitting pss+swap vs Time
[2026-01-13 03:24:13] 2026-01-13 08:23:34,144 | INFO     | sum of square deviations: 338804492.0
[2026-01-13 03:24:13] 2026-01-13 08:23:34,144 | INFO     | sum of deviations: -4412167698.000006
[2026-01-13 03:24:13] 2026-01-13 08:23:34,144 | INFO     | mean x: 1768289477.0
[2026-01-13 03:24:13] 2026-01-13 08:23:34,144 | INFO     | mean y: 2820440.650485437
[2026-01-13 03:24:13] 2026-01-13 08:23:34,144 | INFO     | intersect: 23030820055.049706
[2026-01-13 03:24:13] 2026-01-13 08:23:34,145 | INFO     | chi2: 2.4976799123578513
[2026-01-13 03:24:13] 2026-01-13 08:23:34,145 | INFO     | sum of square deviations: 291817564.5
[2026-01-13 03:24:13] 2026-01-13 08:23:34,145 | INFO     | sum of deviations: 4391282090.999992
[2026-01-13 03:24:13] 2026-01-13 08:23:34,145 | INFO     | mean x: 1768289324.5
[2026-01-13 03:24:13] 2026-01-13 08:23:34,146 | INFO     | mean y: 2848059.3469387754
[2026-01-13 03:24:13] 2026-01-13 08:23:34,146 | INFO     | intersect: -26606438656.097923
[2026-01-13 03:24:13] 2026-01-13 08:23:34,146 | INFO     | chi2: 1.7248904678140715
[2026-01-13 03:24:13] 2026-01-13 08:23:34,146 | INFO     | current chi2=1.7248904678140715 (change=30.940291456892638 %)
[2026-01-13 03:24:13] 2026-01-13 08:23:34,146 | INFO     | sum of square deviations: 249388862.0
[2026-01-13 03:24:13] 2026-01-13 08:23:34,147 | INFO     | sum of deviations: 5532935459.999998
[2026-01-13 03:24:13] 2026-01-13 08:23:34,147 | INFO     | mean x: 1768289172.0
[2026-01-13 03:24:13] 2026-01-13 08:23:34,147 | INFO     | mean y: 2852165.0860215053
[2026-01-13 03:24:13] 2026-01-13 08:23:34,147 | INFO     | intersect: -39228370050.81565
[2026-01-13 03:24:13] 2026-01-13 08:23:34,147 | INFO     | chi2: 1.7260401969850319
[2026-01-13 03:24:13] 2026-01-13 08:23:34,147 | INFO     | current chi2=1.7260401969850319 (change=-0.06665519883227021 %)
[2026-01-13 03:24:13] 2026-01-13 08:23:34,147 | INFO     | right removable region: 92
[2026-01-13 03:24:13] 2026-01-13 08:23:34,148 | INFO     | sum of square deviations: 291817564.5
[2026-01-13 03:24:13] 2026-01-13 08:23:34,148 | INFO     | sum of deviations: -23421621487.999996
[2026-01-13 03:24:13] 2026-01-13 08:23:34,148 | INFO     | mean x: 1768289629.5
[2026-01-13 03:24:13] 2026-01-13 08:23:34,148 | INFO     | mean y: 2881029.2040816327
[2026-01-13 03:24:13] 2026-01-13 08:23:34,148 | INFO     | intersect: 141927889738.9
[2026-01-13 03:24:13] 2026-01-13 08:23:34,149 | INFO     | chi2: 0.9252270828867043
[2026-01-13 03:24:13] 2026-01-13 08:23:34,149 | INFO     | current chi2=0.9252270828867043 (change=62.956539054146674 %)
[2026-01-13 03:24:13] 2026-01-13 08:23:34,149 | INFO     | sum of square deviations: 249388862.0
[2026-01-13 03:24:13] 2026-01-13 08:23:34,149 | INFO     | sum of deviations: -24001825672.0
[2026-01-13 03:24:13] 2026-01-13 08:23:34,150 | INFO     | mean x: 1768289782.0
[2026-01-13 03:24:13] 2026-01-13 08:23:34,150 | INFO     | mean y: 2882856.1612903224
[2026-01-13 03:24:13] 2026-01-13 08:23:34,150 | INFO     | intersect: 170187640686.85736
[2026-01-13 03:24:13] 2026-01-13 08:23:34,150 | INFO     | chi2: 0.8704634347431766
[2026-01-13 03:24:13] 2026-01-13 08:23:34,150 | INFO     | current chi2=0.8704634347431766 (change=5.918941323319828 %)
[2026-01-13 03:24:13] 2026-01-13 08:23:34,150 | INFO     | left removable region: 20
[2026-01-13 03:24:13] 2026-01-13 08:23:34,150 | INFO     | sum of square deviations: 115715658.0
[2026-01-13 03:24:13] 2026-01-13 08:23:34,151 | INFO     | sum of deviations: -10530635692.000002
[2026-01-13 03:24:13] 2026-01-13 08:23:34,151 | INFO     | mean x: 1768289751.5
[2026-01-13 03:24:13] 2026-01-13 08:23:34,151 | INFO     | mean y: 2915092.6666666665
[2026-01-13 03:24:13] 2026-01-13 08:23:34,151 | INFO     | intersect: 160925088399.09778
[2026-01-13 03:24:13] 2026-01-13 08:23:34,151 | INFO     | chi2: 0.0471826720142123
[2026-01-13 03:24:13] 2026-01-13 08:23:34,151 | INFO     | current memory leak: -91.00 B/s (using 72 data points, chi2=0.05)
[2026-01-13 03:24:13] 2026-01-13 08:23:34,152 | INFO     | could have reported an average CPU frequency of 2125 MHz (7 samples)
[2026-01-13 03:24:13] 2026-01-13 08:23:34,152 | INFO     | ..............................
[2026-01-13 03:24:13] 2026-01-13 08:23:34,152 | INFO     | . Timing measurements:
[2026-01-13 03:24:13] 2026-01-13 08:23:34,152 | INFO     | . get job = 0 s
[2026-01-13 03:24:13] 2026-01-13 08:23:34,152 | INFO     | . initial setup = 2 s
[2026-01-13 03:24:13] 2026-01-13 08:23:34,152 | INFO     | . payload setup = 7 s
[2026-01-13 03:24:13] 2026-01-13 08:23:34,152 | INFO     | . stage-in = 0 s
[2026-01-13 03:24:13] 2026-01-13 08:23:34,152 | INFO     | . payload execution = 6243 s
[2026-01-13 03:24:13] 2026-01-13 08:23:34,153 | INFO     | . stage-out = 0 s
[2026-01-13 03:24:13] 2026-01-13 08:23:34,153 | INFO     | . log creation = 0 s
[2026-01-13 03:24:13] 2026-01-13 08:23:34,153 | INFO     | ..............................
[2026-01-13 03:24:13] 2026-01-13 08:23:34,235 | INFO     | 
[2026-01-13 03:24:13] 2026-01-13 08:23:34,235 | INFO     | job summary report
[2026-01-13 03:24:13] 2026-01-13 08:23:34,235 | INFO     | --------------------------------------------------
[2026-01-13 03:24:13] 2026-01-13 08:23:34,235 | INFO     | PanDA job id: 6968277421
[2026-01-13 03:24:13] 2026-01-13 08:23:34,235 | INFO     | task id: 48188657
[2026-01-13 03:24:13] 2026-01-13 08:23:34,236 | INFO     | errors: (none)
[2026-01-13 03:24:13] 2026-01-13 08:23:34,236 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 03:24:13] 2026-01-13 08:23:34,236 | INFO     | pilot state: finished 
[2026-01-13 03:24:13] 2026-01-13 08:23:34,236 | INFO     | transexitcode: 0
[2026-01-13 03:24:13] 2026-01-13 08:23:34,236 | INFO     | exeerrorcode: 0
[2026-01-13 03:24:13] 2026-01-13 08:23:34,236 | INFO     | exeerrordiag: 
[2026-01-13 03:24:13] 2026-01-13 08:23:34,237 | INFO     | exitcode: 0
[2026-01-13 03:24:13] 2026-01-13 08:23:34,237 | INFO     | exitmsg: OK
[2026-01-13 03:24:13] 2026-01-13 08:23:34,237 | INFO     | cpuconsumptiontime: 69213 s
[2026-01-13 03:24:13] 2026-01-13 08:23:34,237 | INFO     | nevents: 400
[2026-01-13 03:24:13] 2026-01-13 08:23:34,237 | INFO     | neventsw: 0
[2026-01-13 03:24:13] 2026-01-13 08:23:34,237 | INFO     | pid: 4227
[2026-01-13 03:24:13] 2026-01-13 08:23:34,237 | INFO     | pgrp: 4227
[2026-01-13 03:24:13] 2026-01-13 08:23:34,238 | INFO     | corecount: 12
[2026-01-13 03:24:13] 2026-01-13 08:23:34,238 | INFO     | event service: False
[2026-01-13 03:24:13] 2026-01-13 08:23:34,238 | INFO     | sizes: {0: 2284121, 5: 2284383, 11: 2284439, 6254: 2311387, 6255: 2320441, 6260: 2320579}
[2026-01-13 03:24:13] 2026-01-13 08:23:34,238 | INFO     | --------------------------------------------------
[2026-01-13 03:24:13] 2026-01-13 08:23:34,238 | INFO     | 
[2026-01-13 03:24:13] 2026-01-13 08:23:34,238 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-13 03:24:13] 2026-01-13 08:23:34,261 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 03:24:13] 2026-01-13 08:23:34,262 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 03:24:13] 2026-01-13 08:23:34,262 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 03:24:13] 2026-01-13 08:23:34,262 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 03:24:13] 2026-01-13 08:23:34,262 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 03:24:13] 2026-01-13 08:23:34,262 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 03:24:13] 2026-01-13 08:23:34,262 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 03:24:13] 2026-01-13 08:23:34,263 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 03:24:13] 2026-01-13 08:23:34,263 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 03:24:13] 2026-01-13 08:23:34,263 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 03:24:13] 2026-01-13 08:23:34,263 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 03:24:13] 2026-01-13 08:23:34,263 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 03:24:13] 2026-01-13 08:23:34,264 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 03:24:13] 2026-01-13 08:23:34,264 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 03:24:13] 2026-01-13 08:23:34,264 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 03:24:13] 2026-01-13 08:23:34,264 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 03:24:13] 2026-01-13 08:23:34,264 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 03:24:13] 2026-01-13 08:23:34,264 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 03:24:13] 2026-01-13 08:23:34,265 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 03:24:13] 2026-01-13 08:23:34,265 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 03:24:13] 2026-01-13 08:23:34,265 | INFO     | job 6968277421 has completed (purged errors)
[2026-01-13 03:24:13] 2026-01-13 08:23:34,265 | INFO     | overall cleanup function is called
[2026-01-13 03:24:13] 2026-01-13 08:23:35,273 | INFO     | --- collectZombieJob: --- 10, [4227]
[2026-01-13 03:24:13] 2026-01-13 08:23:35,274 | INFO     | zombie collector waiting for pid 4227
[2026-01-13 03:24:13] 2026-01-13 08:23:35,274 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 03:24:13] 2026-01-13 08:23:35,274 | INFO     | collected zombie processes
[2026-01-13 03:24:13] 2026-01-13 08:23:35,274 | INFO     | will attempt to kill all subprocesses of pid=4227
[2026-01-13 03:24:13] 2026-01-13 08:23:35,365 | INFO     | process IDs to be killed: [4227] (in reverse order)
[2026-01-13 03:24:13] 2026-01-13 08:23:35,417 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 03:24:13] 2026-01-13 08:23:35,417 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 03:24:13] 2026-01-13 08:23:35,420 | INFO     | did not find any defunct processes belonging to 4227
[2026-01-13 03:24:13] 2026-01-13 08:23:35,423 | INFO     | did not find any defunct processes belonging to 4227
[2026-01-13 03:24:13] 2026-01-13 08:23:35,423 | INFO     | ready for new job
[2026-01-13 03:24:13] 2026-01-13 08:23:35,423 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 03:24:13] 2026-01-13 08:23:35,424 | INFO     | ***************************************
[2026-01-13 03:24:13] 2026-01-13 08:23:35,425 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 03:24:13] 2026-01-13 08:23:35,425 | INFO     | ***************************************
[2026-01-13 03:24:13] 2026-01-13 08:23:35,425 | INFO     | 
[2026-01-13 03:24:13] 2026-01-13 08:23:35,425 | INFO     | architecture information:
[2026-01-13 03:24:13] 2026-01-13 08:23:35,426 | INFO     | executing command: cat /etc/os-release
[2026-01-13 03:24:13] 2026-01-13 08:23:35,441 | INFO     | cat /etc/os-release:
[2026-01-13 03:24:13] NAME="CentOS Linux"
[2026-01-13 03:24:13] VERSION="7 (Core)"
[2026-01-13 03:24:13] ID="centos"
[2026-01-13 03:24:13] ID_LIKE="rhel fedora"
[2026-01-13 03:24:13] VERSION_ID="7"
[2026-01-13 03:24:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 03:24:13] ANSI_COLOR="0;31"
[2026-01-13 03:24:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 03:24:13] HOME_URL="https://www.centos.org/"
[2026-01-13 03:24:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 03:24:13] 
[2026-01-13 03:24:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 03:24:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 03:24:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 03:24:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 03:24:13] 
[2026-01-13 03:24:13] 2026-01-13 08:23:35,441 | INFO     | ***************************************
[2026-01-13 03:24:13] 2026-01-13 08:23:35,944 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-13 03:24:13] 2026-01-13 08:23:35,962 | INFO     | sufficient remaining disk space (29043458048 B)
[2026-01-13 03:24:13] 2026-01-13 08:23:35,962 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 03:24:13] 2026-01-13 08:23:35,962 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 03:24:13] 2026-01-13 08:23:35,962 | INFO     | update_server=False
[2026-01-13 03:24:13] 2026-01-13 08:23:35,962 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 03:24:13] 2026-01-13 08:23:35,963 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 03:24:13] 2026-01-13 08:23:35,963 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 03:24:13] 2026-01-13 08:23:35,964 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 03:24:13] 2026-01-13 08:23:35,964 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-13 03:24:13] 2026-01-13 08:23:35,964 | INFO     | aborting loop
[2026-01-13 03:24:13] 2026-01-13 08:23:35,964 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 03:24:13] 2026-01-13 08:23:35,965 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 03:24:13] 2026-01-13 08:23:35,965 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 03:24:13] 2026-01-13 08:23:35,988 | INFO     | all payload control threads have been joined
[2026-01-13 03:24:13] 2026-01-13 08:23:36,968 | INFO     | [job] retrieve thread has finished
[2026-01-13 03:24:13] 2026-01-13 08:23:36,969 | INFO     | [job] queue monitor thread has finished
[2026-01-13 03:24:13] 2026-01-13 08:23:36,970 | INFO     | [job] job monitor thread has finished
[2026-01-13 03:24:13] 2026-01-13 08:23:36,984 | INFO     | all data control threads have been joined
[2026-01-13 03:24:13] 2026-01-13 08:23:36,988 | INFO     | [job] validate thread has finished
[2026-01-13 03:24:13] 2026-01-13 08:23:36,994 | INFO     | [payload] control thread has finished
[2026-01-13 03:24:13] 2026-01-13 08:23:37,197 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 03:24:13] 2026-01-13 08:23:37,214 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 03:24:13] 2026-01-13 08:23:37,524 | INFO     | all job control threads have been joined
[2026-01-13 03:24:13] 2026-01-13 08:23:37,526 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 03:24:13] 2026-01-13 08:23:37,725 | INFO     | [data] copytool_in thread has finished
[2026-01-13 03:24:13] 2026-01-13 08:23:37,730 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 03:24:13] 2026-01-13 08:23:37,862 | INFO     | [payload] failed_post thread has finished
[2026-01-13 03:24:13] 2026-01-13 08:23:37,989 | INFO     | [data] control thread has finished
[2026-01-13 03:24:13] 2026-01-13 08:23:38,408 | INFO     | [payload] validate_post thread has finished
[2026-01-13 03:24:13] 2026-01-13 08:23:38,529 | INFO     | [job] control thread has finished
[2026-01-13 03:24:13] 2026-01-13 08:23:39,202 | INFO     | [data] copytool_out thread has finished
[2026-01-13 03:24:13] 2026-01-13 08:23:39,969 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 03:24:13] 2026-01-13 08:23:46,563 | INFO     | job.realtimelogging is not enabled
[2026-01-13 03:24:13] 2026-01-13 08:23:47,569 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 03:24:13] 2026-01-13 08:23:55,032 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-01-13 03:24:13] 2026-01-13 08:24:07,062 | INFO     | [monitor] cgroup control has ended
[2026-01-13 03:24:13] 2026-01-13 08:24:07,901 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140553000101696)>', '<ExcThread(monitor, started 140552083314432)>']
[2026-01-13 03:24:13] 2026-01-13 08:24:08,119 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 03:24:13] 2026-01-13 08:24:08,119 | INFO     | [monitor] control thread has ended
[2026-01-13 03:24:13] 2026-01-13 08:24:12,915 | INFO     | all workflow threads have been joined
[2026-01-13 03:24:13] 2026-01-13 08:24:12,915 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 03:24:13] 2026-01-13 08:24:12,915 | INFO     | traces error code: 0
[2026-01-13 03:24:13] 2026-01-13 08:24:12,915 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 03:24:13] 2026-01-13 08:24:13,003 [wrapper] ==== pilot stdout END ====
[2026-01-13 03:24:13] 2026-01-13 08:24:13,007 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 03:24:13] 2026-01-13 08:24:13,011 [wrapper] pilotpid: 30080
[2026-01-13 03:24:13] 2026-01-13 08:24:13,014 [wrapper] Pilot exit status: 0
[2026-01-13 03:24:13] 2026-01-13 08:24:13,031 [wrapper] pandaids: 6968277421
[2026-01-13 03:24:13] 2026-01-13 08:24:13,070 [wrapper] cleanup supervisor_pilot 11517 30081
[2026-01-13 03:24:13] 2026-01-13 08:24:13,074 [wrapper] Test setup, not cleaning
[2026-01-13 03:24:13] 2026-01-13 08:24:13,078 [wrapper] apfmon messages muted
[2026-01-13 03:24:13] 2026-01-13 08:24:13,082 [wrapper] ==== wrapper stdout END ====
[2026-01-13 03:24:13] 2026-01-13 08:24:13,086 [wrapper] ==== wrapper stderr END ====
[2026-01-13 03:24:13]  *** Error codes and diagnostics ***
[2026-01-13 03:24:13]     "exeErrorCode": 0,
[2026-01-13 03:24:13]     "exeErrorDiag": "",
[2026-01-13 03:24:13]     "pilotErrorCode": 0,
[2026-01-13 03:24:13]     "pilotErrorDiag": "",
[2026-01-13 03:24:13]  *** Listing of results directory ***
[2026-01-13 03:24:13] total 605512
[2026-01-13 03:24:13] -rw-r--r-- 1 boincer umatlas    579449 Jan 12 23:28 pilot3.tar.gz
[2026-01-13 03:24:13] -rw-r--r-- 1 boincer umatlas      5112 Jan 13 00:03 queuedata.json
[2026-01-13 03:24:13] -rwx------ 1 boincer umatlas     36322 Jan 13 00:04 runpilot2-wrapper.sh
[2026-01-13 03:24:13] -rw-r--r-- 1 boincer umatlas       100 Jan 13 01:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 03:24:13] -rwxr-xr-x 1 boincer umatlas      7986 Jan 13 01:38 run_atlas
[2026-01-13 03:24:13] -rw-r--r-- 1 boincer umatlas       105 Jan 13 01:38 job.xml
[2026-01-13 03:24:13] -rw-r--r-- 2 boincer umatlas 323205416 Jan 13 01:38 EVNT.48188654._000004.pool.root.1
[2026-01-13 03:24:13] -rw-r--r-- 2 boincer umatlas     15847 Jan 13 01:38 start_atlas.sh
[2026-01-13 03:24:13] drwxrwx--x 2 boincer umatlas      4096 Jan 13 01:38 shared
[2026-01-13 03:24:13] -rw-r--r-- 2 boincer umatlas    592414 Jan 13 01:38 input.tar.gz
[2026-01-13 03:24:13] -rw-r--r-- 1 boincer umatlas         0 Jan 13 01:38 boinc_lockfile
[2026-01-13 03:24:13] -rw-r--r-- 1 boincer umatlas      2627 Jan 13 01:38 pandaJob.out
[2026-01-13 03:24:13] -rw------- 1 boincer umatlas        57 Jan 13 01:38 setup.sh.local
[2026-01-13 03:24:13] -rw------- 1 boincer umatlas    993374 Jan 13 01:38 agis_schedconf.cvmfs.json
[2026-01-13 03:24:13] -rw------- 1 boincer umatlas   1516240 Jan 13 01:38 agis_ddmendpoints.agis.ALL.json
[2026-01-13 03:24:13] drwx------ 5 boincer umatlas      4096 Jan 13 01:38 pilot3
[2026-01-13 03:24:13] -rw-r--r-- 1 boincer umatlas      5952 Jan 13 03:18 init_data.xml
[2026-01-13 03:24:13] -rw------- 1 boincer umatlas 290234351 Jan 13 03:22 HITS.48188657._000079.pool.root.1
[2026-01-13 03:24:13] -rw-r--r-- 1 boincer umatlas       529 Jan 13 03:23 boinc_task_state.xml
[2026-01-13 03:24:13] -rw------- 1 boincer umatlas        95 Jan 13 03:23 pilot_heartbeat.json
[2026-01-13 03:24:13] -rw------- 1 boincer umatlas      1045 Jan 13 03:23 memory_monitor_summary.json
[2026-01-13 03:24:13] -rw------- 1 boincer umatlas    451564 Jan 13 03:23 log.48188657._000079.job.log.tgz.1
[2026-01-13 03:24:13] -rw------- 1 boincer umatlas      7836 Jan 13 03:23 heartbeat.json
[2026-01-13 03:24:13] -rw-r--r-- 1 boincer umatlas      8192 Jan 13 03:23 boinc_mmap_file
[2026-01-13 03:24:13] -rw-r--r-- 1 boincer umatlas        27 Jan 13 03:23 wrapper_checkpoint.txt
[2026-01-13 03:24:13] -rw------- 1 boincer umatlas      4624 Jan 13 03:24 pilotlog.txt
[2026-01-13 03:24:13] -rw------- 1 boincer umatlas    890328 Jan 13 03:24 log.48188657._000079.job.log.1
[2026-01-13 03:24:13] -rw------- 1 boincer umatlas       357 Jan 13 03:24 output.list
[2026-01-13 03:24:13] -rw-r--r-- 1 boincer umatlas       620 Jan 13 03:24 runtime_log
[2026-01-13 03:24:13] -rw------- 1 boincer umatlas   1361920 Jan 13 03:24 result.tar.gz
[2026-01-13 03:24:13] -rw-r--r-- 1 boincer umatlas      9344 Jan 13 03:24 runtime_log.err
[2026-01-13 03:24:13] -rw------- 1 boincer umatlas       660 Jan 13 03:24 OGtMDmWllz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCxnKDmL2ejbn.diag
[2026-01-13 03:24:13] -rw-r--r-- 1 boincer umatlas     20925 Jan 13 03:24 stderr.txt
[2026-01-13 03:24:13] HITS file was successfully produced:
[2026-01-13 03:24:13] -rw------- 1 boincer umatlas 290234351 Jan 13 03:22 shared/HITS.pool.root.1
[2026-01-13 03:24:13]  *** Contents of shared directory: ***
[2026-01-13 03:24:13] total 600996
[2026-01-13 03:24:13] -rw-r--r-- 2 boincer umatlas 323205416 Jan 13 01:38 ATLAS.root_0
[2026-01-13 03:24:13] -rw-r--r-- 2 boincer umatlas     15847 Jan 13 01:38 start_atlas.sh
[2026-01-13 03:24:13] -rw-r--r-- 2 boincer umatlas    592414 Jan 13 01:38 input.tar.gz
[2026-01-13 03:24:13] -rw------- 1 boincer umatlas 290234351 Jan 13 03:22 HITS.pool.root.1
[2026-01-13 03:24:13] -rw------- 1 boincer umatlas   1361920 Jan 13 03:24 result.tar.gz
03:24:15 (26367): run_atlas exited; CPU time 69195.112229
03:24:15 (26367): called boinc_finish(0)

</stderr_txt>
]]>

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