Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:08:40 (1730534): wrapper (7.7.26015): starting
00:08:40 (1730534): wrapper: running run_atlas (--nthreads 12)
[2026-01-13 00:08:40] Arguments: --nthreads 12
[2026-01-13 00:08:40] Threads: 12
[2026-01-13 00:08:40] Checking for CVMFS
[2026-01-13 00:08:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 00:08:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 00:08:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 00:08:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 00:08:41] 2.13.3.0 12460 98730 235208 155077 1 600 26934136 32935937 30911 16776704 0 970088017 99.646 907762093 36138 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-13 00:08:41] CVMFS is ok
[2026-01-13 00:08:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 00:08:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 00:08:41] Further information can be found at the LHC@home message board.
[2026-01-13 00:08:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 00:08:41] Checking for apptainer binary...
[2026-01-13 00:08:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 00:08:41] Running /usr/bin/apptainer --version
[2026-01-13 00:08:41] apptainer version 1.4.5-2.el9
[2026-01-13 00:08:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 00:08:41] c7-6-31.aglt2.org
[2026-01-13 00:08:41] apptainer works
[2026-01-13 00:08:42] Set ATHENA_PROC_NUMBER=12
[2026-01-13 00:08:42] Set ATHENA_CORE_NUMBER=12
[2026-01-13 00:08:42] Starting ATLAS job with PandaID=6968277536
[2026-01-13 00:08:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 04:59:47]  *** The last 200 lines of the pilot log: ***
[2026-01-13 04:59:47] 2026-01-13 09:59:09,883 | INFO     | time since job start (17406s) is within the limit (349056.0s)
[2026-01-13 04:59:47] 2026-01-13 09:59:10,506 | INFO     | monitor loop #1175: job 0:6968277536 is in state 'finished'
[2026-01-13 04:59:47] 2026-01-13 09:59:10,506 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 04:59:47] 2026-01-13 09:59:11,889 | INFO     | time since job start (17408s) is within the limit (349056.0s)
[2026-01-13 04:59:47] 2026-01-13 09:59:13,012 | INFO     | monitor loop #1176: job 0:6968277536 is in state 'finished'
[2026-01-13 04:59:47] 2026-01-13 09:59:13,012 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 04:59:47] 2026-01-13 09:59:13,021 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 04:59:47] 2026-01-13 09:59:13,041 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3329.6212187499987
[2026-01-13 04:59:47] 2026-01-13 09:59:13,081 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6968277536/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 04:59:47] 2026-01-13 09:59:13,081 | INFO     | extracted standard info from prmon json
[2026-01-13 04:59:47] 2026-01-13 09:59:13,081 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 04:59:47] 2026-01-13 09:59:13,081 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 04:59:47] 2026-01-13 09:59:13,082 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 04:59:47] 2026-01-13 09:59:13,082 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 04:59:47] 2026-01-13 09:59:13,085 | INFO     | fitting pss+swap vs Time
[2026-01-13 04:59:47] 2026-01-13 09:59:13,085 | INFO     | sum of square deviations: 7177791864.57545
[2026-01-13 04:59:47] 2026-01-13 09:59:13,087 | INFO     | sum of deviations: 91388868896.99295
[2026-01-13 04:59:47] 2026-01-13 09:59:13,087 | INFO     | mean x: 1768289652.1614034
[2026-01-13 04:59:47] 2026-01-13 09:59:13,087 | INFO     | mean y: 2704915.2175438595
[2026-01-13 04:59:47] 2026-01-13 09:59:13,087 | INFO     | intersect: -22511460198.825665
[2026-01-13 04:59:47] 2026-01-13 09:59:13,087 | INFO     | chi2: 2.8654583107705243
[2026-01-13 04:59:47] 2026-01-13 09:59:13,088 | INFO     | sum of square deviations: 6806598934.442894
[2026-01-13 04:59:47] 2026-01-13 09:59:13,089 | INFO     | sum of deviations: 108801672008.21428
[2026-01-13 04:59:47] 2026-01-13 09:59:13,089 | INFO     | mean x: 1768289499.6642857
[2026-01-13 04:59:47] 2026-01-13 09:59:13,089 | INFO     | mean y: 2711951.8214285714
[2026-01-13 04:59:47] 2026-01-13 09:59:13,089 | INFO     | intersect: -28262924970.679264
[2026-01-13 04:59:47] 2026-01-13 09:59:13,090 | INFO     | chi2: 2.159732617666801
[2026-01-13 04:59:47] 2026-01-13 09:59:13,090 | INFO     | current chi2=2.159732617666801 (change=24.628719617070725 %)
[2026-01-13 04:59:47] 2026-01-13 09:59:13,090 | INFO     | right removable region: 279
[2026-01-13 04:59:47] 2026-01-13 09:59:13,090 | INFO     | sum of square deviations: 6806570874.442894
[2026-01-13 04:59:47] 2026-01-13 09:59:13,091 | INFO     | sum of deviations: 26741044458.664288
[2026-01-13 04:59:47] 2026-01-13 09:59:13,091 | INFO     | mean x: 1768289804.6642857
[2026-01-13 04:59:47] 2026-01-13 09:59:13,092 | INFO     | mean y: 2731338.9964285716
[2026-01-13 04:59:47] 2026-01-13 09:59:13,092 | INFO     | intersect: -6944366862.81297
[2026-01-13 04:59:47] 2026-01-13 09:59:13,092 | INFO     | chi2: 0.9225331805956463
[2026-01-13 04:59:47] 2026-01-13 09:59:13,092 | INFO     | current chi2=0.9225331805956463 (change=67.80503917547568 %)
[2026-01-13 04:59:47] 2026-01-13 09:59:13,092 | INFO     | sum of square deviations: 6448373384.305475
[2026-01-13 04:59:47] 2026-01-13 09:59:13,094 | INFO     | sum of deviations: 3168604949.6836357
[2026-01-13 04:59:47] 2026-01-13 09:59:13,094 | INFO     | mean x: 1768289957.1672728
[2026-01-13 04:59:47] 2026-01-13 09:59:13,094 | INFO     | mean y: 2741378.898181818
[2026-01-13 04:59:47] 2026-01-13 09:59:13,094 | INFO     | intersect: -866161827.6675403
[2026-01-13 04:59:47] 2026-01-13 09:59:13,094 | INFO     | chi2: 0.7332775376429066
[2026-01-13 04:59:47] 2026-01-13 09:59:13,094 | INFO     | current chi2=0.7332775376429066 (change=20.514778973103617 %)
[2026-01-13 04:59:47] 2026-01-13 09:59:13,094 | INFO     | left removable region: 20
[2026-01-13 04:59:47] 2026-01-13 09:59:13,095 | INFO     | sum of square deviations: 5387064756.509653
[2026-01-13 04:59:47] 2026-01-13 09:59:13,096 | INFO     | sum of deviations: 15498015826.266415
[2026-01-13 04:59:47] 2026-01-13 09:59:13,096 | INFO     | mean x: 1768290079.158301
[2026-01-13 04:59:47] 2026-01-13 09:59:13,096 | INFO     | mean y: 2751927.969111969
[2026-01-13 04:59:47] 2026-01-13 09:59:13,096 | INFO     | intersect: -5084431700.018549
[2026-01-13 04:59:47] 2026-01-13 09:59:13,096 | INFO     | chi2: 0.004766354456564735
[2026-01-13 04:59:47] 2026-01-13 09:59:13,096 | INFO     | current memory leak: 2.88 B/s (using 259 data points, chi2=0.00)
[2026-01-13 04:59:47] 2026-01-13 09:59:13,097 | INFO     | could have reported an average CPU frequency of 3307 MHz (13 samples)
[2026-01-13 04:59:47] 2026-01-13 09:59:13,097 | INFO     | ..............................
[2026-01-13 04:59:47] 2026-01-13 09:59:13,097 | INFO     | . Timing measurements:
[2026-01-13 04:59:47] 2026-01-13 09:59:13,097 | INFO     | . get job = 0 s
[2026-01-13 04:59:47] 2026-01-13 09:59:13,097 | INFO     | . initial setup = 2 s
[2026-01-13 04:59:47] 2026-01-13 09:59:13,097 | INFO     | . payload setup = 10 s
[2026-01-13 04:59:47] 2026-01-13 09:59:13,097 | INFO     | . stage-in = 0 s
[2026-01-13 04:59:47] 2026-01-13 09:59:13,097 | INFO     | . payload execution = 17356 s
[2026-01-13 04:59:47] 2026-01-13 09:59:13,097 | INFO     | . stage-out = 2 s
[2026-01-13 04:59:47] 2026-01-13 09:59:13,097 | INFO     | . log creation = 0 s
[2026-01-13 04:59:47] 2026-01-13 09:59:13,097 | INFO     | ..............................
[2026-01-13 04:59:47] 2026-01-13 09:59:13,384 | INFO     | 
[2026-01-13 04:59:47] 2026-01-13 09:59:13,385 | INFO     | job summary report
[2026-01-13 04:59:47] 2026-01-13 09:59:13,385 | INFO     | --------------------------------------------------
[2026-01-13 04:59:47] 2026-01-13 09:59:13,385 | INFO     | PanDA job id: 6968277536
[2026-01-13 04:59:47] 2026-01-13 09:59:13,385 | INFO     | task id: 48188657
[2026-01-13 04:59:47] 2026-01-13 09:59:13,385 | INFO     | errors: (none)
[2026-01-13 04:59:47] 2026-01-13 09:59:13,385 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 04:59:47] 2026-01-13 09:59:13,385 | INFO     | pilot state: finished 
[2026-01-13 04:59:47] 2026-01-13 09:59:13,385 | INFO     | transexitcode: 0
[2026-01-13 04:59:47] 2026-01-13 09:59:13,385 | INFO     | exeerrorcode: 0
[2026-01-13 04:59:47] 2026-01-13 09:59:13,385 | INFO     | exeerrordiag: 
[2026-01-13 04:59:47] 2026-01-13 09:59:13,385 | INFO     | exitcode: 0
[2026-01-13 04:59:47] 2026-01-13 09:59:13,386 | INFO     | exitmsg: OK
[2026-01-13 04:59:47] 2026-01-13 09:59:13,386 | INFO     | cpuconsumptiontime: 48069 s
[2026-01-13 04:59:47] 2026-01-13 09:59:13,386 | INFO     | nevents: 400
[2026-01-13 04:59:47] 2026-01-13 09:59:13,386 | INFO     | neventsw: 0
[2026-01-13 04:59:47] 2026-01-13 09:59:13,386 | INFO     | pid: 1800256
[2026-01-13 04:59:47] 2026-01-13 09:59:13,386 | INFO     | pgrp: 1800256
[2026-01-13 04:59:47] 2026-01-13 09:59:13,386 | INFO     | corecount: 12
[2026-01-13 04:59:47] 2026-01-13 09:59:13,386 | INFO     | event service: False
[2026-01-13 04:59:47] 2026-01-13 09:59:13,386 | INFO     | sizes: {0: 2284125, 10: 2284387, 11: 2284415, 17369: 2316874, 17372: 2325872, 17373: 2325928, 17382: 2326250}
[2026-01-13 04:59:47] 2026-01-13 09:59:13,386 | INFO     | --------------------------------------------------
[2026-01-13 04:59:47] 2026-01-13 09:59:13,386 | INFO     | 
[2026-01-13 04:59:47] 2026-01-13 09:59:13,386 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-13 04:59:47] 2026-01-13 09:59:13,519 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 04:59:47] 2026-01-13 09:59:13,520 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 04:59:47] 2026-01-13 09:59:13,520 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 04:59:47] 2026-01-13 09:59:13,520 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 04:59:47] 2026-01-13 09:59:13,520 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 04:59:47] 2026-01-13 09:59:13,520 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 04:59:47] 2026-01-13 09:59:13,520 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 04:59:47] 2026-01-13 09:59:13,520 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 04:59:47] 2026-01-13 09:59:13,520 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 04:59:47] 2026-01-13 09:59:13,520 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 04:59:47] 2026-01-13 09:59:13,520 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 04:59:47] 2026-01-13 09:59:13,520 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 04:59:47] 2026-01-13 09:59:13,520 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 04:59:47] 2026-01-13 09:59:13,520 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 04:59:47] 2026-01-13 09:59:13,521 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 04:59:47] 2026-01-13 09:59:13,521 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 04:59:47] 2026-01-13 09:59:13,521 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 04:59:47] 2026-01-13 09:59:13,521 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 04:59:47] 2026-01-13 09:59:13,521 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 04:59:47] 2026-01-13 09:59:13,521 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 04:59:47] 2026-01-13 09:59:13,521 | INFO     | job 6968277536 has completed (purged errors)
[2026-01-13 04:59:47] 2026-01-13 09:59:13,521 | INFO     | overall cleanup function is called
[2026-01-13 04:59:47] 2026-01-13 09:59:13,715 | INFO     | PID=1754825 has CPU usage=12.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-13 04:59:47] 2026-01-13 09:59:13,715 | INFO     | .. there are 52 such processes running
[2026-01-13 04:59:47] 2026-01-13 09:59:14,534 | INFO     | --- collectZombieJob: --- 10, [1800256]
[2026-01-13 04:59:47] 2026-01-13 09:59:14,535 | INFO     | zombie collector waiting for pid 1800256
[2026-01-13 04:59:47] 2026-01-13 09:59:14,535 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 04:59:47] 2026-01-13 09:59:14,535 | INFO     | collected zombie processes
[2026-01-13 04:59:47] 2026-01-13 09:59:14,535 | INFO     | will attempt to kill all subprocesses of pid=1800256
[2026-01-13 04:59:47] 2026-01-13 09:59:15,090 | INFO     | process IDs to be killed: [1800256] (in reverse order)
[2026-01-13 04:59:47] 2026-01-13 09:59:15,266 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 04:59:47] 2026-01-13 09:59:15,266 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 04:59:47] 2026-01-13 09:59:15,289 | INFO     | did not find any defunct processes belonging to 1800256
[2026-01-13 04:59:47] 2026-01-13 09:59:15,309 | INFO     | did not find any defunct processes belonging to 1800256
[2026-01-13 04:59:47] 2026-01-13 09:59:15,310 | INFO     | ready for new job
[2026-01-13 04:59:47] 2026-01-13 09:59:15,310 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 04:59:47] 2026-01-13 09:59:15,312 | INFO     | ***************************************
[2026-01-13 04:59:47] 2026-01-13 09:59:15,312 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 04:59:47] 2026-01-13 09:59:15,312 | INFO     | ***************************************
[2026-01-13 04:59:47] 2026-01-13 09:59:15,312 | INFO     | 
[2026-01-13 04:59:47] 2026-01-13 09:59:15,315 | INFO     | architecture information:
[2026-01-13 04:59:47] 2026-01-13 09:59:15,315 | INFO     | executing command: cat /etc/os-release
[2026-01-13 04:59:47] 2026-01-13 09:59:15,329 | INFO     | cat /etc/os-release:
[2026-01-13 04:59:47] NAME="CentOS Linux"
[2026-01-13 04:59:47] VERSION="7 (Core)"
[2026-01-13 04:59:47] ID="centos"
[2026-01-13 04:59:47] ID_LIKE="rhel fedora"
[2026-01-13 04:59:47] VERSION_ID="7"
[2026-01-13 04:59:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 04:59:47] ANSI_COLOR="0;31"
[2026-01-13 04:59:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 04:59:47] HOME_URL="https://www.centos.org/"
[2026-01-13 04:59:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 04:59:47] 
[2026-01-13 04:59:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 04:59:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 04:59:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 04:59:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 04:59:47] 
[2026-01-13 04:59:47] 2026-01-13 09:59:15,329 | INFO     | ***************************************
[2026-01-13 04:59:47] 2026-01-13 09:59:15,832 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-13 04:59:47] 2026-01-13 09:59:15,892 | INFO     | sufficient remaining disk space (70777831424 B)
[2026-01-13 04:59:47] 2026-01-13 09:59:15,892 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 04:59:47] 2026-01-13 09:59:15,893 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 04:59:47] 2026-01-13 09:59:15,893 | INFO     | update_server=False
[2026-01-13 04:59:47] 2026-01-13 09:59:15,893 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 04:59:47] 2026-01-13 09:59:16,155 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 04:59:47] 2026-01-13 09:59:16,262 | INFO     | all payload control threads have been joined
[2026-01-13 04:59:47] 2026-01-13 09:59:16,539 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 04:59:47] 2026-01-13 09:59:16,539 | INFO     | aborting loop
[2026-01-13 04:59:47] 2026-01-13 09:59:16,571 | INFO     | all data control threads have been joined
[2026-01-13 04:59:47] 2026-01-13 09:59:16,864 | INFO     | all job control threads have been joined
[2026-01-13 04:59:47] 2026-01-13 09:59:16,898 | INFO     | [job] retrieve thread has finished
[2026-01-13 04:59:47] 2026-01-13 09:59:16,914 | INFO     | [payload] failed_post thread has finished
[2026-01-13 04:59:47] 2026-01-13 09:59:17,146 | INFO     | [data] copytool_in thread has finished
[2026-01-13 04:59:47] 2026-01-13 09:59:17,273 | INFO     | [payload] control thread has finished
[2026-01-13 04:59:47] 2026-01-13 09:59:17,544 | INFO     | [job] job monitor thread has finished
[2026-01-13 04:59:47] 2026-01-13 09:59:17,576 | INFO     | [data] control thread has finished
[2026-01-13 04:59:47] 2026-01-13 09:59:17,590 | INFO     | [job] validate thread has finished
[2026-01-13 04:59:47] 2026-01-13 09:59:17,603 | INFO     | [payload] validate_post thread has finished
[2026-01-13 04:59:47] 2026-01-13 09:59:17,872 | INFO     | [job] control thread has finished
[2026-01-13 04:59:47] 2026-01-13 09:59:18,013 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 04:59:47] 2026-01-13 09:59:18,037 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 04:59:47] 2026-01-13 09:59:18,171 | INFO     | [data] copytool_out thread has finished
[2026-01-13 04:59:47] 2026-01-13 09:59:18,206 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 04:59:47] 2026-01-13 09:59:18,206 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 04:59:47] 2026-01-13 09:59:18,645 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 04:59:47] 2026-01-13 09:59:19,211 | INFO     | [job] queue monitor thread has finished
[2026-01-13 04:59:47] 2026-01-13 09:59:22,662 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 04:59:47] 2026-01-13 09:59:26,522 | INFO     | job.realtimelogging is not enabled
[2026-01-13 04:59:47] 2026-01-13 09:59:27,533 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 04:59:47] 2026-01-13 09:59:32,679 | INFO     | [monitor] cgroup control has ended
[2026-01-13 04:59:47] 2026-01-13 09:59:33,425 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140339954255680)>', '<ExcThread(monitor, started 140339306284800)>']
[2026-01-13 04:59:47] 2026-01-13 09:59:38,457 | INFO     | all workflow threads have been joined
[2026-01-13 04:59:47] 2026-01-13 09:59:38,457 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 04:59:47] 2026-01-13 09:59:38,458 | INFO     | traces error code: 0
[2026-01-13 04:59:47] 2026-01-13 09:59:38,458 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 04:59:47] 2026-01-13 09:59:46,476 | INFO     | PID=1754825 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 04:59:47] 2026-01-13 09:59:46,476 | INFO     | .. there are 51 such processes running
[2026-01-13 04:59:47] 2026-01-13 09:59:46,476 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 04:59:47] 2026-01-13 09:59:46,476 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 04:59:47] 2026-01-13 09:59:46,476 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 04:59:47] 2026-01-13 09:59:46,476 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 04:59:47] 2026-01-13 09:59:46,476 | INFO     | [monitor] control thread has ended
[2026-01-13 04:59:47] 2026-01-13 09:59:46,730 [wrapper] ==== pilot stdout END ====
[2026-01-13 04:59:47] 2026-01-13 09:59:46,732 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 04:59:47] 2026-01-13 09:59:46,734 [wrapper] pilotpid: 1754825
[2026-01-13 04:59:47] 2026-01-13 09:59:46,736 [wrapper] Pilot exit status: 0
[2026-01-13 04:59:47] 2026-01-13 09:59:46,767 [wrapper] pandaids: 6968277536
[2026-01-13 04:59:47] 2026-01-13 09:59:46,891 [wrapper] cleanup supervisor_pilot  177286 1754827
[2026-01-13 04:59:47] 2026-01-13 09:59:46,895 [wrapper] Test setup, not cleaning
[2026-01-13 04:59:47] 2026-01-13 09:59:46,897 [wrapper] apfmon messages muted
[2026-01-13 04:59:47] 2026-01-13 09:59:46,899 [wrapper] ==== wrapper stdout END ====
[2026-01-13 04:59:47] 2026-01-13 09:59:46,902 [wrapper] ==== wrapper stderr END ====
[2026-01-13 04:59:47]  *** Error codes and diagnostics ***
[2026-01-13 04:59:47]     "exeErrorCode": 0,
[2026-01-13 04:59:47]     "exeErrorDiag": "",
[2026-01-13 04:59:47]     "pilotErrorCode": 0,
[2026-01-13 04:59:47]     "pilotErrorDiag": "",
[2026-01-13 04:59:47]  *** Listing of results directory ***
[2026-01-13 04:59:47] total 606928
[2026-01-13 04:59:47] -rw-r--r--. 1 boincer umatlas    579449 Jan 12 23:28 pilot3.tar.gz
[2026-01-13 04:59:47] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 00:03 queuedata.json
[2026-01-13 04:59:47] -rwx------. 1 boincer umatlas     36322 Jan 13 00:04 runpilot2-wrapper.sh
[2026-01-13 04:59:47] -rw-r--r--. 1 boincer umatlas       100 Jan 13 00:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 04:59:47] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 00:08 run_atlas
[2026-01-13 04:59:47] -rw-r--r--. 1 boincer umatlas       105 Jan 13 00:08 job.xml
[2026-01-13 04:59:47] -rw-r--r--. 2 boincer umatlas 317997897 Jan 13 00:08 EVNT.48188654._000008.pool.root.1
[2026-01-13 04:59:47] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 00:08 shared
[2026-01-13 04:59:47] -rw-r--r--. 2 boincer umatlas    592412 Jan 13 00:08 input.tar.gz
[2026-01-13 04:59:47] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 00:08 start_atlas.sh
[2026-01-13 04:59:47] -rw-r--r--. 1 boincer umatlas         0 Jan 13 00:08 boinc_lockfile
[2026-01-13 04:59:47] -rw-r--r--. 1 boincer umatlas      2629 Jan 13 00:08 pandaJob.out
[2026-01-13 04:59:47] -rw-------. 1 boincer umatlas        57 Jan 13 00:08 setup.sh.local
[2026-01-13 04:59:47] -rw-------. 1 boincer umatlas    987755 Jan 13 00:09 agis_schedconf.cvmfs.json
[2026-01-13 04:59:47] drwx------. 5 boincer umatlas      4096 Jan 13 00:09 pilot3
[2026-01-13 04:59:47] -rw-r--r--. 1 boincer umatlas      6944 Jan 13 04:56 init_data.xml
[2026-01-13 04:59:47] -rw-------. 1 boincer umatlas 293575498 Jan 13 04:58 HITS.48188657._000194.pool.root.1
[2026-01-13 04:59:47] -rw-r--r--. 1 boincer umatlas       529 Jan 13 04:58 boinc_task_state.xml
[2026-01-13 04:59:47] -rw-------. 1 boincer umatlas        95 Jan 13 04:58 pilot_heartbeat.json
[2026-01-13 04:59:47] -rw-------. 1 boincer umatlas      1035 Jan 13 04:58 memory_monitor_summary.json
[2026-01-13 04:59:47] -rw-------. 1 boincer umatlas   1516240 Jan 13 04:59 agis_ddmendpoints.agis.ALL.json
[2026-01-13 04:59:47] -rw-------. 1 boincer umatlas    627406 Jan 13 04:59 log.48188657._000194.job.log.tgz.1
[2026-01-13 04:59:47] -rw-------. 1 boincer umatlas      7769 Jan 13 04:59 heartbeat.json
[2026-01-13 04:59:47] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 04:59 boinc_mmap_file
[2026-01-13 04:59:47] -rw-r--r--. 1 boincer umatlas        27 Jan 13 04:59 wrapper_checkpoint.txt
[2026-01-13 04:59:47] -rw-------. 1 boincer umatlas       823 Jan 13 04:59 pilotlog.txt
[2026-01-13 04:59:47] -rw-------. 1 boincer umatlas   2372108 Jan 13 04:59 log.48188657._000194.job.log.1
[2026-01-13 04:59:47] -rw-------. 1 boincer umatlas       357 Jan 13 04:59 output.list
[2026-01-13 04:59:47] -rw-r--r--. 1 boincer umatlas       620 Jan 13 04:59 runtime_log
[2026-01-13 04:59:47] -rw-------. 1 boincer umatlas   3020800 Jan 13 04:59 result.tar.gz
[2026-01-13 04:59:47] -rw-------. 1 boincer umatlas       655 Jan 13 04:59 zpeKDmXllz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8xnKDmbxu5Fm.diag
[2026-01-13 04:59:47] -rw-r--r--. 1 boincer umatlas      9340 Jan 13 04:59 runtime_log.err
[2026-01-13 04:59:47] -rw-r--r--. 1 boincer umatlas     21448 Jan 13 04:59 stderr.txt
[2026-01-13 04:59:47] HITS file was successfully produced:
[2026-01-13 04:59:47] -rw-------. 1 boincer umatlas 293575498 Jan 13 04:58 shared/HITS.pool.root.1
[2026-01-13 04:59:47]  *** Contents of shared directory: ***
[2026-01-13 04:59:47] total 600800
[2026-01-13 04:59:47] -rw-r--r--. 2 boincer umatlas 317997897 Jan 13 00:08 ATLAS.root_0
[2026-01-13 04:59:47] -rw-r--r--. 2 boincer umatlas    592412 Jan 13 00:08 input.tar.gz
[2026-01-13 04:59:47] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 00:08 start_atlas.sh
[2026-01-13 04:59:47] -rw-------. 1 boincer umatlas 293575498 Jan 13 04:58 HITS.pool.root.1
[2026-01-13 04:59:47] -rw-------. 1 boincer umatlas   3020800 Jan 13 04:59 result.tar.gz
04:59:49 (1730534): run_atlas exited; CPU time 48894.485721
04:59:49 (1730534): called boinc_finish(0)

</stderr_txt>
]]>

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