Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:07:56 (1693023): wrapper (7.7.26015): starting
00:07:56 (1693023): wrapper: running run_atlas (--nthreads 12)
[2026-01-13 00:07:56] Arguments: --nthreads 12
[2026-01-13 00:07:56] Threads: 12
[2026-01-13 00:07:56] Checking for CVMFS
[2026-01-13 00:07:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 00:07:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 00:07:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 00:07:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 00:07:56] 2.13.3.0 12460 98729 233672 155077 2 584 26929116 32935937 30586 16776704 0 970010030 99.646 907760670 36138 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-13 00:07:56] CVMFS is ok
[2026-01-13 00:07:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 00:07:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 00:07:56] Further information can be found at the LHC@home message board.
[2026-01-13 00:07:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 00:07:56] Checking for apptainer binary...
[2026-01-13 00:07:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 00:07:56] Running /usr/bin/apptainer --version
[2026-01-13 00:07:56] apptainer version 1.4.5-2.el9
[2026-01-13 00:07:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 00:07:56] c7-6-31.aglt2.org
[2026-01-13 00:07:56] apptainer works
[2026-01-13 00:07:56] Set ATHENA_PROC_NUMBER=12
[2026-01-13 00:07:56] Set ATHENA_CORE_NUMBER=12
[2026-01-13 00:07:56] Starting ATLAS job with PandaID=6968277532
[2026-01-13 00:07:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 05:16:56]  *** The last 200 lines of the pilot log: ***
[2026-01-13 05:16:56] 2026-01-13 10:16:21,365 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3223.274031249999
[2026-01-13 05:16:56] 2026-01-13 10:16:21,370 | INFO     | sufficient remaining disk space (71631372288 B)
[2026-01-13 05:16:56] 2026-01-13 10:16:21,370 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-13 05:16:56] 2026-01-13 10:16:21,371 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6968277532: 5020309 B (within 4404019200 B limit)
[2026-01-13 05:16:56] 2026-01-13 10:16:21,371 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6968277532/HITS.48188657._000190.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-13 05:16:56] 2026-01-13 10:16:21,371 | INFO     | total size of present files: 0 B (workdir size: 5020309 B)
[2026-01-13 05:16:56] 2026-01-13 10:16:21,371 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6968277532/HITS.48188657._000190.pool.root.1 since it does not exist
[2026-01-13 05:16:56] 2026-01-13 10:16:21,395 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6968277532/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 05:16:56] 2026-01-13 10:16:21,395 | INFO     | extracted standard info from prmon json
[2026-01-13 05:16:56] 2026-01-13 10:16:21,395 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 05:16:56] 2026-01-13 10:16:21,396 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 05:16:56] 2026-01-13 10:16:21,396 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 05:16:56] 2026-01-13 10:16:21,396 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 05:16:56] 2026-01-13 10:16:21,400 | INFO     | fitting pss+swap vs Time
[2026-01-13 05:16:56] 2026-01-13 10:16:21,402 | INFO     | sum of square deviations: 8625817372.732683
[2026-01-13 05:16:56] 2026-01-13 10:16:21,404 | INFO     | sum of deviations: 326684218334.5247
[2026-01-13 05:16:56] 2026-01-13 10:16:21,407 | INFO     | mean x: 1768290147.029703
[2026-01-13 05:16:56] 2026-01-13 10:16:21,407 | INFO     | mean y: 2586217.0528052803
[2026-01-13 05:16:56] 2026-01-13 10:16:21,407 | INFO     | intersect: -66967587102.07371
[2026-01-13 05:16:56] 2026-01-13 10:16:21,408 | INFO     | chi2: 4.483507319433179
[2026-01-13 05:16:56] 2026-01-13 10:16:21,408 | INFO     | sum of square deviations: 8205802940.228206
[2026-01-13 05:16:56] 2026-01-13 10:16:21,410 | INFO     | sum of deviations: 339747658050.50995
[2026-01-13 05:16:56] 2026-01-13 10:16:21,410 | INFO     | mean x: 1768289994.5302014
[2026-01-13 05:16:56] 2026-01-13 10:16:21,410 | INFO     | mean y: 2590856.8322147653
[2026-01-13 05:16:56] 2026-01-13 10:16:21,410 | INFO     | intersect: -73210522932.5025
[2026-01-13 05:16:56] 2026-01-13 10:16:21,410 | INFO     | chi2: 3.738778230306589
[2026-01-13 05:16:56] 2026-01-13 10:16:21,411 | INFO     | current chi2=3.738778230306589 (change=16.61041314460799 %)
[2026-01-13 05:16:56] 2026-01-13 10:16:21,411 | INFO     | right removable region: 297
[2026-01-13 05:16:56] 2026-01-13 10:16:21,411 | INFO     | sum of square deviations: 8205797450.228206
[2026-01-13 05:16:56] 2026-01-13 10:16:21,413 | INFO     | sum of deviations: 244370776556.34888
[2026-01-13 05:16:56] 2026-01-13 10:16:21,413 | INFO     | mean x: 1768290299.5302014
[2026-01-13 05:16:56] 2026-01-13 10:16:21,413 | INFO     | mean y: 2616038.5167785236
[2026-01-13 05:16:56] 2026-01-13 10:16:21,413 | INFO     | intersect: -52657527755.458626
[2026-01-13 05:16:56] 2026-01-13 10:16:21,413 | INFO     | chi2: 2.1216445633283882
[2026-01-13 05:16:56] 2026-01-13 10:16:21,414 | INFO     | current chi2=2.1216445633283882 (change=52.67890934107777 %)
[2026-01-13 05:16:56] 2026-01-13 10:16:21,414 | INFO     | sum of square deviations: 7799638252.723567
[2026-01-13 05:16:56] 2026-01-13 10:16:21,416 | INFO     | sum of deviations: 205024008599.46744
[2026-01-13 05:16:56] 2026-01-13 10:16:21,416 | INFO     | mean x: 1768290452.0307167
[2026-01-13 05:16:56] 2026-01-13 10:16:21,416 | INFO     | mean y: 2630813.3924914678
[2026-01-13 05:16:56] 2026-01-13 10:16:21,416 | INFO     | intersect: -46479268102.484184
[2026-01-13 05:16:56] 2026-01-13 10:16:21,416 | INFO     | chi2: 1.7787065580272379
[2026-01-13 05:16:56] 2026-01-13 10:16:21,416 | INFO     | current chi2=1.7787065580272379 (change=16.163782154120902 %)
[2026-01-13 05:16:56] 2026-01-13 10:16:21,416 | INFO     | left removable region: 20
[2026-01-13 05:16:56] 2026-01-13 10:16:21,417 | INFO     | sum of square deviations: 6590370592.707585
[2026-01-13 05:16:56] 2026-01-13 10:16:21,418 | INFO     | sum of deviations: 158414526718.25995
[2026-01-13 05:16:56] 2026-01-13 10:16:21,418 | INFO     | mean x: 1768290574.032491
[2026-01-13 05:16:56] 2026-01-13 10:16:21,418 | INFO     | mean y: 2660512.9711191338
[2026-01-13 05:16:56] 2026-01-13 10:16:21,418 | INFO     | intersect: -42502219970.636345
[2026-01-13 05:16:56] 2026-01-13 10:16:21,419 | INFO     | chi2: 0.6362035380558537
[2026-01-13 05:16:56] 2026-01-13 10:16:21,419 | INFO     | current memory leak: 24.04 B/s (using 277 data points, chi2=0.64)
[2026-01-13 05:16:56] 2026-01-13 10:16:21,420 | INFO     | could have reported an average CPU frequency of 3319 MHz (14 samples)
[2026-01-13 05:16:56] 2026-01-13 10:16:21,420 | INFO     | ..............................
[2026-01-13 05:16:56] 2026-01-13 10:16:21,420 | INFO     | . Timing measurements:
[2026-01-13 05:16:56] 2026-01-13 10:16:21,420 | INFO     | . get job = 0 s
[2026-01-13 05:16:56] 2026-01-13 10:16:21,420 | INFO     | . initial setup = 2 s
[2026-01-13 05:16:56] 2026-01-13 10:16:21,420 | INFO     | . payload setup = 13 s
[2026-01-13 05:16:56] 2026-01-13 10:16:21,420 | INFO     | . stage-in = 0 s
[2026-01-13 05:16:56] 2026-01-13 10:16:21,420 | INFO     | . payload execution = 18432 s
[2026-01-13 05:16:56] 2026-01-13 10:16:21,420 | INFO     | . stage-out = 6 s
[2026-01-13 05:16:56] 2026-01-13 10:16:21,420 | INFO     | . log creation = 0 s
[2026-01-13 05:16:56] 2026-01-13 10:16:21,420 | INFO     | ..............................
[2026-01-13 05:16:56] 2026-01-13 10:16:21,465 | INFO     | time since job start (18488s) is within the limit (349056.0s)
[2026-01-13 05:16:56] 2026-01-13 10:16:21,623 | INFO     | 
[2026-01-13 05:16:56] 2026-01-13 10:16:21,624 | INFO     | job summary report
[2026-01-13 05:16:56] 2026-01-13 10:16:21,624 | INFO     | --------------------------------------------------
[2026-01-13 05:16:56] 2026-01-13 10:16:21,624 | INFO     | PanDA job id: 6968277532
[2026-01-13 05:16:56] 2026-01-13 10:16:21,625 | INFO     | task id: 48188657
[2026-01-13 05:16:56] 2026-01-13 10:16:21,625 | INFO     | errors: (none)
[2026-01-13 05:16:56] 2026-01-13 10:16:21,625 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 05:16:56] 2026-01-13 10:16:21,625 | INFO     | pilot state: finished 
[2026-01-13 05:16:56] 2026-01-13 10:16:21,625 | INFO     | transexitcode: 0
[2026-01-13 05:16:56] 2026-01-13 10:16:21,625 | INFO     | exeerrorcode: 0
[2026-01-13 05:16:56] 2026-01-13 10:16:21,625 | INFO     | exeerrordiag: 
[2026-01-13 05:16:56] 2026-01-13 10:16:21,625 | INFO     | exitcode: 0
[2026-01-13 05:16:56] 2026-01-13 10:16:21,625 | INFO     | exitmsg: OK
[2026-01-13 05:16:56] 2026-01-13 10:16:21,625 | INFO     | cpuconsumptiontime: 45147 s
[2026-01-13 05:16:56] 2026-01-13 10:16:21,625 | INFO     | nevents: 400
[2026-01-13 05:16:56] 2026-01-13 10:16:21,625 | INFO     | neventsw: 0
[2026-01-13 05:16:56] 2026-01-13 10:16:21,625 | INFO     | pid: 1739417
[2026-01-13 05:16:56] 2026-01-13 10:16:21,625 | INFO     | pgrp: 1739417
[2026-01-13 05:16:56] 2026-01-13 10:16:21,625 | INFO     | corecount: 12
[2026-01-13 05:16:56] 2026-01-13 10:16:21,625 | INFO     | event service: False
[2026-01-13 05:16:56] 2026-01-13 10:16:21,626 | INFO     | sizes: {0: 2284125, 7: 2284387, 11: 2284415, 18450: 2316671, 18451: 2316670, 18459: 2325908, 18469: 2326074}
[2026-01-13 05:16:56] 2026-01-13 10:16:21,626 | INFO     | --------------------------------------------------
[2026-01-13 05:16:56] 2026-01-13 10:16:21,626 | INFO     | 
[2026-01-13 05:16:56] 2026-01-13 10:16:21,626 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-13 05:16:56] 2026-01-13 10:16:21,652 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 05:16:56] 2026-01-13 10:16:21,652 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 05:16:56] 2026-01-13 10:16:21,652 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 05:16:56] 2026-01-13 10:16:21,652 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 05:16:56] 2026-01-13 10:16:21,652 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 05:16:56] 2026-01-13 10:16:21,652 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 05:16:56] 2026-01-13 10:16:21,653 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 05:16:56] 2026-01-13 10:16:21,653 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 05:16:56] 2026-01-13 10:16:21,653 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 05:16:56] 2026-01-13 10:16:21,653 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 05:16:56] 2026-01-13 10:16:21,653 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 05:16:56] 2026-01-13 10:16:21,653 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 05:16:56] 2026-01-13 10:16:21,653 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 05:16:56] 2026-01-13 10:16:21,653 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 05:16:56] 2026-01-13 10:16:21,653 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 05:16:56] 2026-01-13 10:16:21,653 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 05:16:56] 2026-01-13 10:16:21,653 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 05:16:56] 2026-01-13 10:16:21,653 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 05:16:56] 2026-01-13 10:16:21,654 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 05:16:56] 2026-01-13 10:16:21,654 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 05:16:56] 2026-01-13 10:16:21,654 | INFO     | job 6968277532 has completed (purged errors)
[2026-01-13 05:16:56] 2026-01-13 10:16:21,654 | INFO     | overall cleanup function is called
[2026-01-13 05:16:56] 2026-01-13 10:16:22,562 | INFO     | number of running child processes to parent process 1739417: 1
[2026-01-13 05:16:56] 2026-01-13 10:16:22,562 | INFO     | maximum number of monitored processes: 6
[2026-01-13 05:16:56] 2026-01-13 10:16:22,562 | INFO     | aborting job monitoring since job object (job id=6968277532) has expired
[2026-01-13 05:16:56] 2026-01-13 10:16:22,689 | INFO     | --- collectZombieJob: --- 10, [1739417]
[2026-01-13 05:16:56] 2026-01-13 10:16:22,689 | INFO     | zombie collector waiting for pid 1739417
[2026-01-13 05:16:56] 2026-01-13 10:16:22,690 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 05:16:56] 2026-01-13 10:16:22,690 | INFO     | collected zombie processes
[2026-01-13 05:16:56] 2026-01-13 10:16:22,690 | INFO     | will attempt to kill all subprocesses of pid=1739417
[2026-01-13 05:16:56] 2026-01-13 10:16:24,445 | INFO     | process IDs to be killed: [1739417] (in reverse order)
[2026-01-13 05:16:56] 2026-01-13 10:16:24,892 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 05:16:56] 2026-01-13 10:16:24,893 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 05:16:56] 2026-01-13 10:16:24,929 | INFO     | did not find any defunct processes belonging to 1739417
[2026-01-13 05:16:56] 2026-01-13 10:16:24,953 | INFO     | did not find any defunct processes belonging to 1739417
[2026-01-13 05:16:56] 2026-01-13 10:16:24,953 | INFO     | ready for new job
[2026-01-13 05:16:56] 2026-01-13 10:16:24,953 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 05:16:56] 2026-01-13 10:16:24,960 | INFO     | ***************************************
[2026-01-13 05:16:56] 2026-01-13 10:16:24,960 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 05:16:56] 2026-01-13 10:16:24,960 | INFO     | ***************************************
[2026-01-13 05:16:56] 2026-01-13 10:16:24,960 | INFO     | 
[2026-01-13 05:16:56] 2026-01-13 10:16:24,982 | INFO     | architecture information:
[2026-01-13 05:16:56] 2026-01-13 10:16:24,983 | INFO     | executing command: cat /etc/os-release
[2026-01-13 05:16:56] 2026-01-13 10:16:25,021 | INFO     | cat /etc/os-release:
[2026-01-13 05:16:56] NAME="CentOS Linux"
[2026-01-13 05:16:56] VERSION="7 (Core)"
[2026-01-13 05:16:56] ID="centos"
[2026-01-13 05:16:56] ID_LIKE="rhel fedora"
[2026-01-13 05:16:56] VERSION_ID="7"
[2026-01-13 05:16:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 05:16:56] ANSI_COLOR="0;31"
[2026-01-13 05:16:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 05:16:56] HOME_URL="https://www.centos.org/"
[2026-01-13 05:16:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 05:16:56] 
[2026-01-13 05:16:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 05:16:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 05:16:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 05:16:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 05:16:56] 
[2026-01-13 05:16:56] 2026-01-13 10:16:25,022 | INFO     | ***************************************
[2026-01-13 05:16:56] 2026-01-13 10:16:25,525 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-13 05:16:56] 2026-01-13 10:16:25,649 | INFO     | sufficient remaining disk space (71638712320 B)
[2026-01-13 05:16:56] 2026-01-13 10:16:25,650 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 05:16:56] 2026-01-13 10:16:25,650 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 05:16:56] 2026-01-13 10:16:25,650 | INFO     | update_server=False
[2026-01-13 05:16:56] 2026-01-13 10:16:25,650 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 05:16:56] 2026-01-13 10:16:25,656 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 05:16:56] 2026-01-13 10:16:25,695 | INFO     | all data control threads have been joined
[2026-01-13 05:16:56] 2026-01-13 10:16:26,074 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 05:16:56] 2026-01-13 10:16:26,074 | INFO     | aborting loop
[2026-01-13 05:16:56] 2026-01-13 10:16:26,210 | INFO     | all payload control threads have been joined
[2026-01-13 05:16:56] 2026-01-13 10:16:26,638 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 05:16:56] 2026-01-13 10:16:26,656 | INFO     | [job] retrieve thread has finished
[2026-01-13 05:16:56] 2026-01-13 10:16:26,709 | INFO     | [data] control thread has finished
[2026-01-13 05:16:56] 2026-01-13 10:16:27,079 | INFO     | [job] job monitor thread has finished
[2026-01-13 05:16:56] 2026-01-13 10:16:27,216 | INFO     | [payload] control thread has finished
[2026-01-13 05:16:56] 2026-01-13 10:16:27,352 | INFO     | all job control threads have been joined
[2026-01-13 05:16:56] 2026-01-13 10:16:27,370 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 05:16:56] 2026-01-13 10:16:27,398 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 05:16:56] 2026-01-13 10:16:27,460 | INFO     | [payload] validate_post thread has finished
[2026-01-13 05:16:56] 2026-01-13 10:16:27,609 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 05:16:56] 2026-01-13 10:16:27,644 | INFO     | [job] queue monitor thread has finished
[2026-01-13 05:16:56] 2026-01-13 10:16:27,663 | INFO     | [data] copytool_out thread has finished
[2026-01-13 05:16:56] 2026-01-13 10:16:27,860 | INFO     | [job] validate thread has finished
[2026-01-13 05:16:56] 2026-01-13 10:16:27,888 | INFO     | [payload] failed_post thread has finished
[2026-01-13 05:16:56] 2026-01-13 10:16:27,929 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 05:16:56] 2026-01-13 10:16:27,947 | INFO     | [data] copytool_in thread has finished
[2026-01-13 05:16:56] 2026-01-13 10:16:27,956 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 05:16:56] 2026-01-13 10:16:28,358 | INFO     | [job] control thread has finished
[2026-01-13 05:16:56] 2026-01-13 10:16:31,620 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 05:16:56] 2026-01-13 10:16:47,606 | INFO     | [monitor] cgroup control has ended
[2026-01-13 05:16:56] 2026-01-13 10:16:48,369 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139857067878208)>', '<ExcThread(monitor, started 139856265074432)>']
[2026-01-13 05:16:56] 2026-01-13 10:16:53,396 | INFO     | all workflow threads have been joined
[2026-01-13 05:16:56] 2026-01-13 10:16:53,396 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 05:16:56] 2026-01-13 10:16:53,397 | INFO     | traces error code: 0
[2026-01-13 05:16:56] 2026-01-13 10:16:53,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 05:16:56] 2026-01-13 10:16:55,824 | INFO     | PID=1701118 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 05:16:56] 2026-01-13 10:16:55,825 | INFO     | .. there are 51 such processes running
[2026-01-13 05:16:56] 2026-01-13 10:16:55,825 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 05:16:56] 2026-01-13 10:16:55,825 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 05:16:56] 2026-01-13 10:16:55,825 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 05:16:56] 2026-01-13 10:16:55,825 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 05:16:56] 2026-01-13 10:16:55,825 | INFO     | [monitor] control thread has ended
[2026-01-13 05:16:56] 2026-01-13 10:16:56,473 [wrapper] ==== pilot stdout END ====
[2026-01-13 05:16:56] 2026-01-13 10:16:56,476 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 05:16:56] 2026-01-13 10:16:56,482 [wrapper] pilotpid: 1701118
[2026-01-13 05:16:56] 2026-01-13 10:16:56,485 [wrapper] Pilot exit status: 0
[2026-01-13 05:16:56] 2026-01-13 10:16:56,496 [wrapper] pandaids: 6968277532
[2026-01-13 05:16:56] 2026-01-13 10:16:56,626 [wrapper] cleanup supervisor_pilot  368585 1701120
[2026-01-13 05:16:56] 2026-01-13 10:16:56,629 [wrapper] Test setup, not cleaning
[2026-01-13 05:16:56] 2026-01-13 10:16:56,632 [wrapper] apfmon messages muted
[2026-01-13 05:16:56] 2026-01-13 10:16:56,636 [wrapper] ==== wrapper stdout END ====
[2026-01-13 05:16:56] 2026-01-13 10:16:56,638 [wrapper] ==== wrapper stderr END ====
[2026-01-13 05:16:56]  *** Error codes and diagnostics ***
[2026-01-13 05:16:56]     "exeErrorCode": 0,
[2026-01-13 05:16:56]     "exeErrorDiag": "",
[2026-01-13 05:16:56]     "pilotErrorCode": 0,
[2026-01-13 05:16:56]     "pilotErrorDiag": "",
[2026-01-13 05:16:56]  *** Listing of results directory ***
[2026-01-13 05:16:56] total 595220
[2026-01-13 05:16:56] -rw-r--r--. 1 boincer umatlas    579449 Jan 12 23:28 pilot3.tar.gz
[2026-01-13 05:16:56] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 00:03 queuedata.json
[2026-01-13 05:16:56] -rwx------. 1 boincer umatlas     36322 Jan 13 00:04 runpilot2-wrapper.sh
[2026-01-13 05:16:56] -rw-r--r--. 1 boincer umatlas       100 Jan 13 00:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 05:16:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 00:07 run_atlas
[2026-01-13 05:16:56] -rw-r--r--. 1 boincer umatlas       105 Jan 13 00:07 job.xml
[2026-01-13 05:16:56] -rw-r--r--. 2 boincer umatlas 317997897 Jan 13 00:07 EVNT.48188654._000008.pool.root.1
[2026-01-13 05:16:56] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 00:07 start_atlas.sh
[2026-01-13 05:16:56] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 00:07 shared
[2026-01-13 05:16:56] -rw-r--r--. 2 boincer umatlas    592415 Jan 13 00:07 input.tar.gz
[2026-01-13 05:16:56] -rw-r--r--. 1 boincer umatlas         0 Jan 13 00:07 boinc_lockfile
[2026-01-13 05:16:56] -rw-r--r--. 1 boincer umatlas      2629 Jan 13 00:07 pandaJob.out
[2026-01-13 05:16:56] -rw-------. 1 boincer umatlas        57 Jan 13 00:07 setup.sh.local
[2026-01-13 05:16:56] -rw-------. 1 boincer umatlas    987755 Jan 13 00:08 agis_schedconf.cvmfs.json
[2026-01-13 05:16:56] drwx------. 5 boincer umatlas      4096 Jan 13 00:08 pilot3
[2026-01-13 05:16:56] -rw-r--r--. 1 boincer umatlas      6945 Jan 13 05:10 init_data.xml
[2026-01-13 05:16:56] -rw-------. 1 boincer umatlas 282020735 Jan 13 05:15 HITS.48188657._000190.pool.root.1
[2026-01-13 05:16:56] -rw-r--r--. 1 boincer umatlas       530 Jan 13 05:15 boinc_task_state.xml
[2026-01-13 05:16:56] -rw-------. 1 boincer umatlas      1035 Jan 13 05:15 memory_monitor_summary.json
[2026-01-13 05:16:56] -rw-------. 1 boincer umatlas   1516240 Jan 13 05:16 agis_ddmendpoints.agis.ALL.json
[2026-01-13 05:16:56] -rw-------. 1 boincer umatlas    607700 Jan 13 05:16 log.48188657._000190.job.log.tgz.1
[2026-01-13 05:16:56] -rw-------. 1 boincer umatlas        95 Jan 13 05:16 pilot_heartbeat.json
[2026-01-13 05:16:56] -rw-------. 1 boincer umatlas      7770 Jan 13 05:16 heartbeat.json
[2026-01-13 05:16:56] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 05:16 boinc_mmap_file
[2026-01-13 05:16:56] -rw-r--r--. 1 boincer umatlas        28 Jan 13 05:16 wrapper_checkpoint.txt
[2026-01-13 05:16:56] -rw-------. 1 boincer umatlas       823 Jan 13 05:16 pilotlog.txt
[2026-01-13 05:16:56] -rw-------. 1 boincer umatlas   2178076 Jan 13 05:16 log.48188657._000190.job.log.1
[2026-01-13 05:16:56] -rw-------. 1 boincer umatlas       357 Jan 13 05:16 output.list
[2026-01-13 05:16:56] -rw-r--r--. 1 boincer umatlas       620 Jan 13 05:16 runtime_log
[2026-01-13 05:16:56] -rw-------. 1 boincer umatlas   2805760 Jan 13 05:16 result.tar.gz
[2026-01-13 05:16:56] -rw-r--r--. 1 boincer umatlas      9340 Jan 13 05:16 runtime_log.err
[2026-01-13 05:16:56] -rw-------. 1 boincer umatlas       654 Jan 13 05:16 CUcKDmXllz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6xnKDmoDsROo.diag
[2026-01-13 05:16:56] -rw-r--r--. 1 boincer umatlas     21610 Jan 13 05:16 stderr.txt
[2026-01-13 05:16:56] HITS file was successfully produced:
[2026-01-13 05:16:56] -rw-------. 1 boincer umatlas 282020735 Jan 13 05:15 shared/HITS.pool.root.1
[2026-01-13 05:16:56]  *** Contents of shared directory: ***
[2026-01-13 05:16:56] total 589304
[2026-01-13 05:16:56] -rw-r--r--. 2 boincer umatlas 317997897 Jan 13 00:07 ATLAS.root_0
[2026-01-13 05:16:56] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 00:07 start_atlas.sh
[2026-01-13 05:16:56] -rw-r--r--. 2 boincer umatlas    592415 Jan 13 00:07 input.tar.gz
[2026-01-13 05:16:56] -rw-------. 1 boincer umatlas 282020735 Jan 13 05:15 HITS.pool.root.1
[2026-01-13 05:16:56] -rw-------. 1 boincer umatlas   2805760 Jan 13 05:16 result.tar.gz
05:16:58 (1693023): run_atlas exited; CPU time 46008.624983
05:16:58 (1693023): called boinc_finish(0)

</stderr_txt>
]]>

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