Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:08:39 (2190441): wrapper (7.7.26015): starting
00:08:39 (2190441): wrapper: running run_atlas (--nthreads 11)
[2026-01-13 00:08:39] Arguments: --nthreads 11
[2026-01-13 00:08:39] Threads: 11
[2026-01-13 00:08:39] Checking for CVMFS
[2026-01-13 00:08:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 00:08:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 00:08:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 00:08:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 00:08:41] 2.13.3.0 12275 98728 366596 155077 3 183 36713435 40960000 32205 16776704 25 460898256 99.635 444044632 37206 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-13 00:08:41] CVMFS is ok
[2026-01-13 00:08:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 00:08:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 00:08:41] Further information can be found at the LHC@home message board.
[2026-01-13 00:08:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 00:08:41] Checking for apptainer binary...
[2026-01-13 00:08:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 00:08:41] Running /usr/bin/apptainer --version
[2026-01-13 00:08:41] apptainer version 1.4.5-2.el9
[2026-01-13 00:08:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 00:08:41] c7-11-11.aglt2.org
[2026-01-13 00:08:41] apptainer works
[2026-01-13 00:08:42] Set ATHENA_PROC_NUMBER=11
[2026-01-13 00:08:42] Set ATHENA_CORE_NUMBER=11
[2026-01-13 00:08:42] Starting ATLAS job with PandaID=6968277549
[2026-01-13 00:08:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 11:49:43]  *** The last 200 lines of the pilot log: ***
[2026-01-13 11:49:43] 2026-01-13 16:48:46,539 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6968277549/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 11:49:43] 2026-01-13 16:48:46,540 | INFO     | extracted standard info from prmon json
[2026-01-13 11:49:43] 2026-01-13 16:48:46,540 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 11:49:43] 2026-01-13 16:48:46,540 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 11:49:43] 2026-01-13 16:48:46,540 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 11:49:43] 2026-01-13 16:48:46,540 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 11:49:43] 2026-01-13 16:48:46,549 | INFO     | fitting pss+swap vs Time
[2026-01-13 11:49:43] 2026-01-13 16:48:46,550 | INFO     | sum of square deviations: 99668124808.94318
[2026-01-13 11:49:43] 2026-01-13 16:48:46,560 | INFO     | sum of deviations: 1265796156809.67
[2026-01-13 11:49:43] 2026-01-13 16:48:46,560 | INFO     | mean x: 1768302023.478832
[2026-01-13 11:49:43] 2026-01-13 16:48:46,560 | INFO     | mean y: 2611103.7357664234
[2026-01-13 11:49:43] 2026-01-13 16:48:46,560 | INFO     | intersect: -22455019253.903164
[2026-01-13 11:49:43] 2026-01-13 16:48:46,561 | INFO     | chi2: 11.429038863361896
[2026-01-13 11:49:43] 2026-01-13 16:48:46,561 | INFO     | sum of square deviations: 97501593846.75146
[2026-01-13 11:49:43] 2026-01-13 16:48:46,574 | INFO     | sum of deviations: 1443601120196.4922
[2026-01-13 11:49:43] 2026-01-13 16:48:46,575 | INFO     | mean x: 1768301870.9808824
[2026-01-13 11:49:43] 2026-01-13 16:48:46,575 | INFO     | mean y: 2623599.5764705883
[2026-01-13 11:49:43] 2026-01-13 16:48:46,575 | INFO     | intersect: -26178718274.750294
[2026-01-13 11:49:43] 2026-01-13 16:48:46,575 | INFO     | chi2: 8.586413940079206
[2026-01-13 11:49:43] 2026-01-13 16:48:46,575 | INFO     | current chi2=8.586413940079206 (change=24.87195080240125 %)
[2026-01-13 11:49:43] 2026-01-13 16:48:46,576 | INFO     | right removable region: 679
[2026-01-13 11:49:43] 2026-01-13 16:48:46,576 | INFO     | sum of square deviations: 97501435307.78838
[2026-01-13 11:49:43] 2026-01-13 16:48:46,587 | INFO     | sum of deviations: 1029658269549.771
[2026-01-13 11:49:43] 2026-01-13 16:48:46,587 | INFO     | mean x: 1768302175.982353
[2026-01-13 11:49:43] 2026-01-13 16:48:46,587 | INFO     | mean y: 2627720.730882353
[2026-01-13 11:49:43] 2026-01-13 16:48:46,587 | INFO     | intersect: -18671425156.700386
[2026-01-13 11:49:43] 2026-01-13 16:48:46,588 | INFO     | chi2: 7.6171261651858675
[2026-01-13 11:49:43] 2026-01-13 16:48:46,588 | INFO     | current chi2=7.6171261651858675 (change=33.352871958427656 %)
[2026-01-13 11:49:43] 2026-01-13 16:48:46,589 | INFO     | sum of square deviations: 95366415542.58655
[2026-01-13 11:49:43] 2026-01-13 16:48:46,598 | INFO     | sum of deviations: 841686045266.9642
[2026-01-13 11:49:43] 2026-01-13 16:48:46,599 | INFO     | mean x: 1768302328.4844444
[2026-01-13 11:49:43] 2026-01-13 16:48:46,599 | INFO     | mean y: 2641142.7585185184
[2026-01-13 11:49:43] 2026-01-13 16:48:46,599 | INFO     | intersect: -15604062592.832767
[2026-01-13 11:49:43] 2026-01-13 16:48:46,599 | INFO     | chi2: 5.355162990116864
[2026-01-13 11:49:43] 2026-01-13 16:48:46,600 | INFO     | current chi2=5.355162990116864 (change=29.695755669734385 %)
[2026-01-13 11:49:43] 2026-01-13 16:48:46,600 | INFO     | sum of square deviations: 93262750783.90437
[2026-01-13 11:49:43] 2026-01-13 16:48:46,618 | INFO     | sum of deviations: 739689311178.2773
[2026-01-13 11:49:43] 2026-01-13 16:48:46,619 | INFO     | mean x: 1768302480.9880598
[2026-01-13 11:49:43] 2026-01-13 16:48:46,619 | INFO     | mean y: 2648525.1597014926
[2026-01-13 11:49:43] 2026-01-13 16:48:46,619 | INFO     | intersect: -14022183823.476482
[2026-01-13 11:49:43] 2026-01-13 16:48:46,619 | INFO     | chi2: 4.683883096737425
[2026-01-13 11:49:43] 2026-01-13 16:48:46,620 | INFO     | current chi2=4.683883096737425 (change=12.53519070508795 %)
[2026-01-13 11:49:43] 2026-01-13 16:48:46,620 | INFO     | left removable region: 30
[2026-01-13 11:49:43] 2026-01-13 16:48:46,620 | INFO     | sum of square deviations: 84765559326.08015
[2026-01-13 11:49:43] 2026-01-13 16:48:46,629 | INFO     | sum of deviations: 768896796661.083
[2026-01-13 11:49:43] 2026-01-13 16:48:46,629 | INFO     | mean x: 1768302755.4838212
[2026-01-13 11:49:43] 2026-01-13 16:48:46,629 | INFO     | mean y: 2672542.5793528506
[2026-01-13 11:49:43] 2026-01-13 16:48:46,629 | INFO     | intersect: -16037359930.84703
[2026-01-13 11:49:43] 2026-01-13 16:48:46,631 | INFO     | chi2: 1.538226486795352
[2026-01-13 11:49:43] 2026-01-13 16:48:46,631 | INFO     | current memory leak: 9.07 B/s (using 649 data points, chi2=1.54)
[2026-01-13 11:49:43] 2026-01-13 16:48:46,632 | INFO     | could have reported an average CPU frequency of 3290 MHz (26 samples)
[2026-01-13 11:49:43] 2026-01-13 16:48:46,632 | INFO     | ..............................
[2026-01-13 11:49:43] 2026-01-13 16:48:46,632 | INFO     | . Timing measurements:
[2026-01-13 11:49:43] 2026-01-13 16:48:46,632 | INFO     | . get job = 0 s
[2026-01-13 11:49:43] 2026-01-13 16:48:46,632 | INFO     | . initial setup = 7 s
[2026-01-13 11:49:43] 2026-01-13 16:48:46,632 | INFO     | . payload setup = 40 s
[2026-01-13 11:49:43] 2026-01-13 16:48:46,632 | INFO     | . stage-in = 0 s
[2026-01-13 11:49:43] 2026-01-13 16:48:46,632 | INFO     | . payload execution = 41770 s
[2026-01-13 11:49:43] 2026-01-13 16:48:46,632 | INFO     | . stage-out = 6 s
[2026-01-13 11:49:43] 2026-01-13 16:48:46,632 | INFO     | . log creation = 0 s
[2026-01-13 11:49:43] 2026-01-13 16:48:46,632 | INFO     | ..............................
[2026-01-13 11:49:43] 2026-01-13 16:48:47,352 | INFO     | 
[2026-01-13 11:49:43] 2026-01-13 16:48:47,441 | INFO     | job summary report
[2026-01-13 11:49:43] 2026-01-13 16:48:47,441 | INFO     | --------------------------------------------------
[2026-01-13 11:49:43] 2026-01-13 16:48:47,441 | INFO     | PanDA job id: 6968277549
[2026-01-13 11:49:43] 2026-01-13 16:48:47,441 | INFO     | task id: 48188657
[2026-01-13 11:49:43] 2026-01-13 16:48:47,441 | INFO     | errors: (none)
[2026-01-13 11:49:43] 2026-01-13 16:48:47,441 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 11:49:43] 2026-01-13 16:48:47,441 | INFO     | pilot state: finished 
[2026-01-13 11:49:43] 2026-01-13 16:48:47,441 | INFO     | transexitcode: 0
[2026-01-13 11:49:43] 2026-01-13 16:48:47,441 | INFO     | exeerrorcode: 0
[2026-01-13 11:49:43] 2026-01-13 16:48:47,441 | INFO     | exeerrordiag: 
[2026-01-13 11:49:43] 2026-01-13 16:48:47,442 | INFO     | exitcode: 0
[2026-01-13 11:49:43] 2026-01-13 16:48:47,442 | INFO     | exitmsg: OK
[2026-01-13 11:49:43] 2026-01-13 16:48:47,442 | INFO     | cpuconsumptiontime: 47644 s
[2026-01-13 11:49:43] 2026-01-13 16:48:47,442 | INFO     | nevents: 400
[2026-01-13 11:49:43] 2026-01-13 16:48:47,442 | INFO     | neventsw: 0
[2026-01-13 11:49:43] 2026-01-13 16:48:47,442 | INFO     | pid: 2232770
[2026-01-13 11:49:43] 2026-01-13 16:48:47,442 | INFO     | pgrp: 2232770
[2026-01-13 11:49:43] 2026-01-13 16:48:47,442 | INFO     | corecount: 11
[2026-01-13 11:49:43] 2026-01-13 16:48:47,442 | INFO     | event service: False
[2026-01-13 11:49:43] 2026-01-13 16:48:47,442 | INFO     | sizes: {0: 2283954, 1: 2284153, 12: 2284153, 23: 2284181, 34: 2284209, 35: 2284499, 46: 2284655, 41816: 2328746, 41824: 2337744, 41825: 2337800, 41849: 2337994}
[2026-01-13 11:49:43] 2026-01-13 16:48:47,442 | INFO     | --------------------------------------------------
[2026-01-13 11:49:43] 2026-01-13 16:48:47,442 | INFO     | 
[2026-01-13 11:49:43] 2026-01-13 16:48:47,442 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-13 11:49:43] 2026-01-13 16:48:47,706 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 11:49:43] 2026-01-13 16:48:47,707 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 11:49:43] 2026-01-13 16:48:47,707 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 11:49:43] 2026-01-13 16:48:47,707 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 11:49:43] 2026-01-13 16:48:47,707 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 11:49:43] 2026-01-13 16:48:47,707 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 11:49:43] 2026-01-13 16:48:47,707 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 11:49:43] 2026-01-13 16:48:47,707 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 11:49:43] 2026-01-13 16:48:47,707 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 11:49:43] 2026-01-13 16:48:47,707 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 11:49:43] 2026-01-13 16:48:47,707 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 11:49:43] 2026-01-13 16:48:47,707 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 11:49:43] 2026-01-13 16:48:47,707 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 11:49:43] 2026-01-13 16:48:47,708 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 11:49:43] 2026-01-13 16:48:47,708 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 11:49:43] 2026-01-13 16:48:47,708 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 11:49:43] 2026-01-13 16:48:47,708 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 11:49:43] 2026-01-13 16:48:47,727 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 11:49:43] 2026-01-13 16:48:47,727 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 11:49:43] 2026-01-13 16:48:47,727 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 11:49:43] 2026-01-13 16:48:47,727 | INFO     | job 6968277549 has completed (purged errors)
[2026-01-13 11:49:43] 2026-01-13 16:48:47,727 | INFO     | overall cleanup function is called
[2026-01-13 11:49:43] 2026-01-13 16:48:48,802 | INFO     | PID=2203100 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 11:49:43] 2026-01-13 16:48:48,802 | INFO     | .. there are 48 such processes running
[2026-01-13 11:49:43] 2026-01-13 16:48:48,811 | INFO     | --- collectZombieJob: --- 10, [2232770]
[2026-01-13 11:49:43] 2026-01-13 16:48:48,811 | INFO     | zombie collector waiting for pid 2232770
[2026-01-13 11:49:43] 2026-01-13 16:48:48,811 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 11:49:43] 2026-01-13 16:48:48,811 | INFO     | collected zombie processes
[2026-01-13 11:49:43] 2026-01-13 16:48:48,811 | INFO     | will attempt to kill all subprocesses of pid=2232770
[2026-01-13 11:49:43] 2026-01-13 16:48:50,410 | INFO     | process IDs to be killed: [2232770] (in reverse order)
[2026-01-13 11:49:43] 2026-01-13 16:48:51,378 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 11:49:43] 2026-01-13 16:48:51,378 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 11:49:43] 2026-01-13 16:48:51,598 | INFO     | did not find any defunct processes belonging to 2232770
[2026-01-13 11:49:43] 2026-01-13 16:48:51,778 | INFO     | did not find any defunct processes belonging to 2232770
[2026-01-13 11:49:43] 2026-01-13 16:48:51,778 | INFO     | ready for new job
[2026-01-13 11:49:43] 2026-01-13 16:48:51,778 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 11:49:43] 2026-01-13 16:48:51,782 | INFO     | ***************************************
[2026-01-13 11:49:43] 2026-01-13 16:48:51,784 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 11:49:43] 2026-01-13 16:48:51,785 | INFO     | ***************************************
[2026-01-13 11:49:43] 2026-01-13 16:48:51,785 | INFO     | 
[2026-01-13 11:49:43] 2026-01-13 16:48:51,788 | INFO     | architecture information:
[2026-01-13 11:49:43] 2026-01-13 16:48:51,788 | INFO     | executing command: cat /etc/os-release
[2026-01-13 11:49:43] 2026-01-13 16:48:51,813 | INFO     | cat /etc/os-release:
[2026-01-13 11:49:43] NAME="CentOS Linux"
[2026-01-13 11:49:43] VERSION="7 (Core)"
[2026-01-13 11:49:43] ID="centos"
[2026-01-13 11:49:43] ID_LIKE="rhel fedora"
[2026-01-13 11:49:43] VERSION_ID="7"
[2026-01-13 11:49:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 11:49:43] ANSI_COLOR="0;31"
[2026-01-13 11:49:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 11:49:43] HOME_URL="https://www.centos.org/"
[2026-01-13 11:49:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 11:49:43] 
[2026-01-13 11:49:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 11:49:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 11:49:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 11:49:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 11:49:43] 
[2026-01-13 11:49:43] 2026-01-13 16:48:51,814 | INFO     | ***************************************
[2026-01-13 11:49:43] 2026-01-13 16:48:52,325 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-13 11:49:43] 2026-01-13 16:48:52,407 | INFO     | sufficient remaining disk space (79196848128 B)
[2026-01-13 11:49:43] 2026-01-13 16:48:52,407 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 11:49:43] 2026-01-13 16:48:52,446 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 11:49:43] 2026-01-13 16:48:52,446 | INFO     | update_server=False
[2026-01-13 11:49:43] 2026-01-13 16:48:52,446 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 11:49:43] 2026-01-13 16:48:52,447 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 11:49:43] 2026-01-13 16:48:52,453 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 11:49:43] 2026-01-13 16:48:52,454 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 11:49:43] 2026-01-13 16:48:52,498 | INFO     | all payload control threads have been joined
[2026-01-13 11:49:43] 2026-01-13 16:48:52,669 | INFO     | all job control threads have been joined
[2026-01-13 11:49:43] 2026-01-13 16:48:52,859 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-13 11:49:43] 2026-01-13 16:48:52,859 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-13 11:49:43] 2026-01-13 16:48:52,859 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 11:49:43] 2026-01-13 16:48:52,859 | INFO     | will abort loop
[2026-01-13 11:49:43] 2026-01-13 16:48:52,885 | INFO     | all data control threads have been joined
[2026-01-13 11:49:43] 2026-01-13 16:48:53,452 | INFO     | [job] retrieve thread has finished
[2026-01-13 11:49:43] 2026-01-13 16:48:53,459 | INFO     | [job] queue monitor thread has finished
[2026-01-13 11:49:43] 2026-01-13 16:48:53,510 | INFO     | [payload] control thread has finished
[2026-01-13 11:49:43] 2026-01-13 16:48:53,613 | INFO     | [payload] failed_post thread has finished
[2026-01-13 11:49:43] 2026-01-13 16:48:53,676 | INFO     | [job] control thread has finished
[2026-01-13 11:49:43] 2026-01-13 16:48:53,884 | INFO     | [job] job monitor thread has finished
[2026-01-13 11:49:43] 2026-01-13 16:48:53,890 | INFO     | [data] control thread has finished
[2026-01-13 11:49:43] 2026-01-13 16:48:54,338 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 11:49:43] 2026-01-13 16:48:54,363 | INFO     | [job] validate thread has finished
[2026-01-13 11:49:43] 2026-01-13 16:48:54,363 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 11:49:43] 2026-01-13 16:48:54,411 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 11:49:43] 2026-01-13 16:48:54,463 | INFO     | [data] copytool_out thread has finished
[2026-01-13 11:49:43] 2026-01-13 16:48:54,829 | INFO     | [payload] validate_post thread has finished
[2026-01-13 11:49:43] 2026-01-13 16:48:54,902 | INFO     | [data] copytool_in thread has finished
[2026-01-13 11:49:43] 2026-01-13 16:48:54,902 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 11:49:43] 2026-01-13 16:48:56,471 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 11:49:43] 2026-01-13 16:49:13,618 | INFO     | [monitor] cgroup control has ended
[2026-01-13 11:49:43] 2026-01-13 16:49:15,603 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139995186812736)>', '<ExcThread(monitor, started 139994391901952)>']
[2026-01-13 11:49:43] 2026-01-13 16:49:20,630 | INFO     | all workflow threads have been joined
[2026-01-13 11:49:43] 2026-01-13 16:49:20,630 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 11:49:43] 2026-01-13 16:49:20,630 | INFO     | traces error code: 0
[2026-01-13 11:49:43] 2026-01-13 16:49:20,630 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 11:49:43] 2026-01-13 16:49:21,937 | INFO     | PID=2203100 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 11:49:43] 2026-01-13 16:49:21,937 | INFO     | .. there are 48 such processes running
[2026-01-13 11:49:43] 2026-01-13 16:49:21,938 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 11:49:43] 2026-01-13 16:49:21,938 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 11:49:43] 2026-01-13 16:49:21,938 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 11:49:43] 2026-01-13 16:49:21,938 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 11:49:43] 2026-01-13 16:49:21,938 | INFO     | [monitor] control thread has ended
[2026-01-13 11:49:43] 2026-01-13 16:49:22,309 [wrapper] ==== pilot stdout END ====
[2026-01-13 11:49:43] 2026-01-13 16:49:22,325 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 11:49:43] 2026-01-13 16:49:22,330 [wrapper] pilotpid: 2203100
[2026-01-13 11:49:43] 2026-01-13 16:49:22,333 [wrapper] Pilot exit status: 0
[2026-01-13 11:49:43] 2026-01-13 16:49:22,367 [wrapper] pandaids: 6968277549
[2026-01-13 11:49:43] 2026-01-13 16:49:22,579 [wrapper] cleanup supervisor_pilot 2907425 2203101
[2026-01-13 11:49:43] 2026-01-13 16:49:22,642 [wrapper] Test setup, not cleaning
[2026-01-13 11:49:43] 2026-01-13 16:49:22,686 [wrapper] apfmon messages muted
[2026-01-13 11:49:43] 2026-01-13 16:49:22,706 [wrapper] ==== wrapper stdout END ====
[2026-01-13 11:49:43] 2026-01-13 16:49:22,720 [wrapper] ==== wrapper stderr END ====
[2026-01-13 11:49:43]  *** Error codes and diagnostics ***
[2026-01-13 11:49:43]     "exeErrorCode": 0,
[2026-01-13 11:49:43]     "exeErrorDiag": "",
[2026-01-13 11:49:43]     "pilotErrorCode": 0,
[2026-01-13 11:49:43]     "pilotErrorDiag": "",
[2026-01-13 11:49:43]  *** Listing of results directory ***
[2026-01-13 11:49:43] total 604800
[2026-01-13 11:49:43] -rw-r--r--. 1 boincer umatlas    579449 Jan 12 23:28 pilot3.tar.gz
[2026-01-13 11:49:43] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 00:03 queuedata.json
[2026-01-13 11:49:43] -rwx------. 1 boincer umatlas     36322 Jan 13 00:04 runpilot2-wrapper.sh
[2026-01-13 11:49:43] -rw-r--r--. 1 boincer umatlas       100 Jan 13 00:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 11:49:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 00:08 run_atlas
[2026-01-13 11:49:43] -rw-r--r--. 1 boincer umatlas       105 Jan 13 00:08 job.xml
[2026-01-13 11:49:43] -rw-r--r--. 2 boincer umatlas 317651167 Jan 13 00:08 EVNT.48188654._000009.pool.root.1
[2026-01-13 11:49:43] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 00:08 start_atlas.sh
[2026-01-13 11:49:43] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 00:08 shared
[2026-01-13 11:49:43] -rw-r--r--. 2 boincer umatlas    592415 Jan 13 00:08 input.tar.gz
[2026-01-13 11:49:43] -rw-r--r--. 1 boincer umatlas         0 Jan 13 00:08 boinc_lockfile
[2026-01-13 11:49:43] -rw-r--r--. 1 boincer umatlas      2629 Jan 13 00:08 pandaJob.out
[2026-01-13 11:49:43] -rw-r--r--. 1 boincer umatlas      2082 Jan 13 00:08 stderr.txt
[2026-01-13 11:49:43] -rw-------. 1 boincer umatlas        57 Jan 13 00:08 setup.sh.local
[2026-01-13 11:49:43] -rw-------. 1 boincer umatlas    987755 Jan 13 00:09 agis_schedconf.cvmfs.json
[2026-01-13 11:49:43] drwx------. 5 boincer umatlas      4096 Jan 13 00:10 pilot3
[2026-01-13 11:49:43] -rw-------. 1 boincer umatlas 285383540 Jan 13 11:44 HITS.48188657._000207.pool.root.1
[2026-01-13 11:49:43] -rw-r--r--. 1 boincer umatlas       530 Jan 13 11:44 boinc_task_state.xml
[2026-01-13 11:49:43] -rw-r--r--. 1 boincer umatlas      6902 Jan 13 11:46 init_data.xml
[2026-01-13 11:49:43] -rw-------. 1 boincer umatlas      1043 Jan 13 11:48 memory_monitor_summary.json
[2026-01-13 11:49:43] -rw-------. 1 boincer umatlas   1516246 Jan 13 11:48 agis_ddmendpoints.agis.ALL.json
[2026-01-13 11:49:43] -rw-------. 1 boincer umatlas    900590 Jan 13 11:48 log.48188657._000207.job.log.tgz.1
[2026-01-13 11:49:43] -rw-------. 1 boincer umatlas      7778 Jan 13 11:48 heartbeat.json
[2026-01-13 11:49:43] -rw-------. 1 boincer umatlas       823 Jan 13 11:49 pilotlog.txt
[2026-01-13 11:49:43] -rw-------. 1 boincer umatlas        95 Jan 13 11:49 pilot_heartbeat.json
[2026-01-13 11:49:43] -rw-------. 1 boincer umatlas   5291912 Jan 13 11:49 log.48188657._000207.job.log.1
[2026-01-13 11:49:43] -rw-------. 1 boincer umatlas       357 Jan 13 11:49 output.list
[2026-01-13 11:49:43] -rw-r--r--. 1 boincer umatlas       620 Jan 13 11:49 runtime_log
[2026-01-13 11:49:43] -rw-------. 1 boincer umatlas   6215680 Jan 13 11:49 result.tar.gz
[2026-01-13 11:49:43] -rw-r--r--. 1 boincer umatlas      9345 Jan 13 11:49 runtime_log.err
[2026-01-13 11:49:43] -rw-------. 1 boincer umatlas       661 Jan 13 11:49 3KJNDmQllz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm04hKDmnC6OOo.diag
[2026-01-13 11:49:43] -rw-r--r--. 1 boincer umatlas        28 Jan 13 11:49 wrapper_checkpoint.txt
[2026-01-13 11:49:43] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 11:49 boinc_mmap_file
[2026-01-13 11:49:43] HITS file was successfully produced:
[2026-01-13 11:49:43] -rw-------. 1 boincer umatlas 285383540 Jan 13 11:44 shared/HITS.pool.root.1
[2026-01-13 11:49:43]  *** Contents of shared directory: ***
[2026-01-13 11:49:43] total 595580
[2026-01-13 11:49:43] -rw-r--r--. 2 boincer umatlas 317651167 Jan 13 00:08 ATLAS.root_0
[2026-01-13 11:49:43] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 00:08 start_atlas.sh
[2026-01-13 11:49:43] -rw-r--r--. 2 boincer umatlas    592415 Jan 13 00:08 input.tar.gz
[2026-01-13 11:49:43] -rw-------. 1 boincer umatlas 285383540 Jan 13 11:44 HITS.pool.root.1
[2026-01-13 11:49:43] -rw-------. 1 boincer umatlas   6215680 Jan 13 11:49 result.tar.gz
11:49:44 (2190441): run_atlas exited; CPU time 48907.713279
11:49:44 (2190441): called boinc_finish(0)

</stderr_txt>
]]>

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