Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:09:11 (1768670): wrapper (7.7.26015): starting
00:09:11 (1768670): wrapper: running run_atlas (--nthreads 12)
[2026-01-13 00:09:11] Arguments: --nthreads 12
[2026-01-13 00:09:11] Threads: 12
[2026-01-13 00:09:11] Checking for CVMFS
[2026-01-13 00:09:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 00:09:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 00:09:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 00:09:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 00:09:12] 2.13.3.0 12460 98730 236744 155077 1 689 27388938 32935936 31925 16776704 0 970159949 99.646 907783970 36138 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-13 00:09:12] CVMFS is ok
[2026-01-13 00:09:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 00:09:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 00:09:12] Further information can be found at the LHC@home message board.
[2026-01-13 00:09:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 00:09:12] Checking for apptainer binary...
[2026-01-13 00:09:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 00:09:12] Running /usr/bin/apptainer --version
[2026-01-13 00:09:12] apptainer version 1.4.5-2.el9
[2026-01-13 00:09:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 00:09:12] c7-6-31.aglt2.org
[2026-01-13 00:09:12] apptainer works
[2026-01-13 00:09:12] Set ATHENA_PROC_NUMBER=12
[2026-01-13 00:09:12] Set ATHENA_CORE_NUMBER=12
[2026-01-13 00:09:12] Starting ATLAS job with PandaID=6968277483
[2026-01-13 00:09:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 05:17:19]  *** The last 200 lines of the pilot log: ***
[2026-01-13 05:17:20] 2026-01-13 07:37:57,125 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3375.9361041666675
[2026-01-13 05:17:20] 2026-01-13 07:37:57,138 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6968277483/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 05:17:20] 2026-01-13 07:37:57,139 | INFO     | extracted standard info from prmon json
[2026-01-13 05:17:20] 2026-01-13 07:37:57,139 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 05:17:20] 2026-01-13 07:37:57,139 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 05:17:20] 2026-01-13 07:37:57,139 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 05:17:20] 2026-01-13 07:37:57,139 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 05:17:20] 2026-01-13 07:37:57,141 | INFO     | fitting pss+swap vs Time
[2026-01-13 05:17:20] 2026-01-13 07:37:57,141 | INFO     | sum of square deviations: 964962510.4383593
[2026-01-13 05:17:20] 2026-01-13 07:37:57,142 | INFO     | sum of deviations: 28779530087.616447
[2026-01-13 05:17:20] 2026-01-13 07:37:57,142 | INFO     | mean x: 1768285442.5205479
[2026-01-13 05:17:20] 2026-01-13 07:37:57,142 | INFO     | mean y: 2680875.794520548
[2026-01-13 05:17:20] 2026-01-13 07:37:57,142 | INFO     | intersect: -52735558740.784966
[2026-01-13 05:17:20] 2026-01-13 07:37:57,142 | INFO     | chi2: 2.4011012879695404
[2026-01-13 05:17:20] 2026-01-13 07:37:57,143 | INFO     | sum of square deviations: 869175582.9361715
[2026-01-13 05:17:20] 2026-01-13 07:37:57,143 | INFO     | sum of deviations: 37378113689.57446
[2026-01-13 05:17:20] 2026-01-13 07:37:57,143 | INFO     | mean x: 1768285290.0212767
[2026-01-13 05:17:20] 2026-01-13 07:37:57,143 | INFO     | mean y: 2694114.475177305
[2026-01-13 05:17:20] 2026-01-13 07:37:57,144 | INFO     | intersect: -76040823333.10501
[2026-01-13 05:17:20] 2026-01-13 07:37:57,144 | INFO     | chi2: 1.696534627540906
[2026-01-13 05:17:20] 2026-01-13 07:37:57,144 | INFO     | current chi2=1.696534627540906 (change=29.34347934253294 %)
[2026-01-13 05:17:20] 2026-01-13 07:37:57,144 | INFO     | sum of square deviations: 779946917.9338263
[2026-01-13 05:17:20] 2026-01-13 07:37:57,145 | INFO     | sum of deviations: 35615901018.15441
[2026-01-13 05:17:20] 2026-01-13 07:37:57,145 | INFO     | mean x: 1768285137.5220587
[2026-01-13 05:17:20] 2026-01-13 07:37:57,145 | INFO     | mean y: 2691101.4485294116
[2026-01-13 05:17:20] 2026-01-13 07:37:57,145 | INFO     | intersect: -80745199532.82484
[2026-01-13 05:17:20] 2026-01-13 07:37:57,145 | INFO     | chi2: 1.6973351506813354
[2026-01-13 05:17:20] 2026-01-13 07:37:57,145 | INFO     | current chi2=1.6973351506813354 (change=-0.0471857825613555 %)
[2026-01-13 05:17:20] 2026-01-13 07:37:57,145 | INFO     | right removable region: 135
[2026-01-13 05:17:20] 2026-01-13 07:37:57,145 | INFO     | sum of square deviations: 869173752.9361715
[2026-01-13 05:17:20] 2026-01-13 07:37:57,146 | INFO     | sum of deviations: -390300453.2978687
[2026-01-13 05:17:20] 2026-01-13 07:37:57,146 | INFO     | mean x: 1768285595.0212767
[2026-01-13 05:17:20] 2026-01-13 07:37:57,146 | INFO     | mean y: 2726794.4326241133
[2026-01-13 05:17:20] 2026-01-13 07:37:57,146 | INFO     | intersect: 796771330.3674068
[2026-01-13 05:17:20] 2026-01-13 07:37:57,146 | INFO     | chi2: 0.7323197635590402
[2026-01-13 05:17:20] 2026-01-13 07:37:57,147 | INFO     | current chi2=0.7323197635590402 (change=69.50067174474273 %)
[2026-01-13 05:17:20] 2026-01-13 07:37:57,147 | INFO     | sum of square deviations: 779943257.9338263
[2026-01-13 05:17:20] 2026-01-13 07:37:57,147 | INFO     | sum of deviations: -1783607048.7794123
[2026-01-13 05:17:20] 2026-01-13 07:37:57,147 | INFO     | mean x: 1768285747.5220587
[2026-01-13 05:17:20] 2026-01-13 07:37:57,147 | INFO     | mean y: 2729167.9264705884
[2026-01-13 05:17:20] 2026-01-13 07:37:57,148 | INFO     | intersect: 4046519394.271512
[2026-01-13 05:17:20] 2026-01-13 07:37:57,148 | INFO     | chi2: 0.7312917045168575
[2026-01-13 05:17:20] 2026-01-13 07:37:57,148 | INFO     | current chi2=0.7312917045168575 (change=0.14038389967605094 %)
[2026-01-13 05:17:20] 2026-01-13 07:37:57,148 | INFO     | left removable region: 20
[2026-01-13 05:17:20] 2026-01-13 07:37:57,148 | INFO     | sum of square deviations: 471546960.9217385
[2026-01-13 05:17:20] 2026-01-13 07:37:57,148 | INFO     | sum of deviations: 4626784698.252175
[2026-01-13 05:17:20] 2026-01-13 07:37:57,148 | INFO     | mean x: 1768285717.026087
[2026-01-13 05:17:20] 2026-01-13 07:37:57,149 | INFO     | mean y: 2748051.5826086956
[2026-01-13 05:17:20] 2026-01-13 07:37:57,151 | INFO     | intersect: -17347543596.31974
[2026-01-13 05:17:20] 2026-01-13 07:37:57,152 | INFO     | chi2: 0.0005448118661490779
[2026-01-13 05:17:20] 2026-01-13 07:37:57,152 | INFO     | current memory leak: 9.81 B/s (using 115 data points, chi2=0.00)
[2026-01-13 05:17:20] 2026-01-13 07:37:57,152 | INFO     | could have reported an average CPU frequency of 3336 MHz (8 samples)
[2026-01-13 05:17:20] 2026-01-13 07:37:57,152 | INFO     | ..............................
[2026-01-13 05:17:20] 2026-01-13 07:37:57,152 | INFO     | . Timing measurements:
[2026-01-13 05:17:20] 2026-01-13 07:37:57,152 | INFO     | . get job = 0 s
[2026-01-13 05:17:20] 2026-01-13 07:37:57,152 | INFO     | . initial setup = 2 s
[2026-01-13 05:17:20] 2026-01-13 07:37:57,152 | INFO     | . payload setup = 12 s
[2026-01-13 05:17:20] 2026-01-13 07:37:57,152 | INFO     | . stage-in = 0 s
[2026-01-13 05:17:20] 2026-01-13 07:37:57,153 | INFO     | . payload execution = 8858 s
[2026-01-13 05:17:20] 2026-01-13 07:37:57,153 | INFO     | . stage-out = 0 s
[2026-01-13 05:17:20] 2026-01-13 07:37:57,153 | INFO     | . log creation = 0 s
[2026-01-13 05:17:20] 2026-01-13 07:37:57,153 | INFO     | ..............................
[2026-01-13 05:17:20] 2026-01-13 07:37:57,218 | INFO     | 
[2026-01-13 05:17:20] 2026-01-13 07:37:57,219 | INFO     | job summary report
[2026-01-13 05:17:20] 2026-01-13 07:37:57,219 | INFO     | --------------------------------------------------
[2026-01-13 05:17:20] 2026-01-13 07:37:57,219 | INFO     | PanDA job id: 6968277483
[2026-01-13 05:17:20] 2026-01-13 07:37:57,219 | INFO     | task id: 48188657
[2026-01-13 05:17:20] 2026-01-13 07:37:57,219 | INFO     | errors: (none)
[2026-01-13 05:17:20] 2026-01-13 07:37:57,219 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 05:17:20] 2026-01-13 07:37:57,219 | INFO     | pilot state: finished 
[2026-01-13 05:17:20] 2026-01-13 07:37:57,219 | INFO     | transexitcode: 0
[2026-01-13 05:17:20] 2026-01-13 07:37:57,219 | INFO     | exeerrorcode: 0
[2026-01-13 05:17:20] 2026-01-13 07:37:57,219 | INFO     | exeerrordiag: 
[2026-01-13 05:17:20] 2026-01-13 07:37:57,219 | INFO     | exitcode: 0
[2026-01-13 05:17:20] 2026-01-13 07:37:57,219 | INFO     | exitmsg: OK
[2026-01-13 05:17:20] 2026-01-13 07:37:57,219 | INFO     | cpuconsumptiontime: 44119 s
[2026-01-13 05:17:20] 2026-01-13 07:37:57,219 | INFO     | nevents: 400
[2026-01-13 05:17:20] 2026-01-13 07:37:57,220 | INFO     | neventsw: 0
[2026-01-13 05:17:20] 2026-01-13 07:37:57,220 | INFO     | pid: 1826813
[2026-01-13 05:17:20] 2026-01-13 07:37:57,220 | INFO     | pgrp: 1826813
[2026-01-13 05:17:20] 2026-01-13 07:37:57,220 | INFO     | corecount: 12
[2026-01-13 05:17:20] 2026-01-13 07:37:57,220 | INFO     | event service: False
[2026-01-13 05:17:20] 2026-01-13 07:37:57,220 | INFO     | sizes: {0: 2284125, 9: 2284387, 11: 2284415, 8871: 2312663, 8872: 2312662, 8873: 2321900, 8881: 2322038}
[2026-01-13 05:17:20] 2026-01-13 07:37:57,220 | INFO     | --------------------------------------------------
[2026-01-13 05:17:20] 2026-01-13 07:37:57,220 | INFO     | 
[2026-01-13 05:17:20] 2026-01-13 07:37:57,220 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2026-01-13 05:17:20] 2026-01-13 07:37:57,239 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 05:17:20] 2026-01-13 07:37:57,239 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 05:17:20] 2026-01-13 07:37:57,239 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 05:17:20] 2026-01-13 07:37:57,239 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 05:17:20] 2026-01-13 07:37:57,239 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 05:17:20] 2026-01-13 07:37:57,239 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 05:17:20] 2026-01-13 07:37:57,239 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 05:17:20] 2026-01-13 07:37:57,239 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 05:17:20] 2026-01-13 07:37:57,239 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 05:17:20] 2026-01-13 07:37:57,239 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 05:17:20] 2026-01-13 07:37:57,239 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 05:17:20] 2026-01-13 07:37:57,240 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 05:17:20] 2026-01-13 07:37:57,240 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 05:17:20] 2026-01-13 07:37:57,240 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 05:17:20] 2026-01-13 07:37:57,240 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 05:17:20] 2026-01-13 07:37:57,240 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 05:17:20] 2026-01-13 07:37:57,240 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 05:17:20] 2026-01-13 07:37:57,240 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 05:17:20] 2026-01-13 07:37:57,240 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 05:17:20] 2026-01-13 07:37:57,240 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 05:17:20] 2026-01-13 07:37:57,240 | INFO     | job 6968277483 has completed (purged errors)
[2026-01-13 05:17:20] 2026-01-13 07:37:57,240 | INFO     | overall cleanup function is called
[2026-01-13 05:17:20] 2026-01-13 07:37:58,253 | INFO     | --- collectZombieJob: --- 10, [1826813]
[2026-01-13 05:17:20] 2026-01-13 07:37:58,253 | INFO     | zombie collector waiting for pid 1826813
[2026-01-13 05:17:20] 2026-01-13 07:37:58,257 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 05:17:20] 2026-01-13 07:37:58,257 | INFO     | collected zombie processes
[2026-01-13 05:17:20] 2026-01-13 07:37:58,257 | INFO     | will attempt to kill all subprocesses of pid=1826813
[2026-01-13 05:17:20] 2026-01-13 07:37:58,396 | INFO     | PID=1796270 has CPU usage=18.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-13 05:17:20] 2026-01-13 07:37:58,396 | INFO     | .. there are 51 such processes running
[2026-01-13 05:17:20] 2026-01-13 07:37:58,906 | INFO     | process IDs to be killed: [1826813] (in reverse order)
[2026-01-13 05:17:20] 2026-01-13 07:37:59,069 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 05:17:20] 2026-01-13 07:37:59,070 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 05:17:20] 2026-01-13 07:37:59,089 | INFO     | did not find any defunct processes belonging to 1826813
[2026-01-13 05:17:20] 2026-01-13 07:37:59,110 | INFO     | did not find any defunct processes belonging to 1826813
[2026-01-13 05:17:20] 2026-01-13 07:37:59,110 | INFO     | ready for new job
[2026-01-13 05:17:20] 2026-01-13 07:37:59,110 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 05:17:20] 2026-01-13 07:37:59,112 | INFO     | ***************************************
[2026-01-13 05:17:20] 2026-01-13 07:37:59,112 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 05:17:20] 2026-01-13 07:37:59,112 | INFO     | ***************************************
[2026-01-13 05:17:20] 2026-01-13 07:37:59,112 | INFO     | 
[2026-01-13 05:17:20] 2026-01-13 07:37:59,117 | INFO     | architecture information:
[2026-01-13 05:17:20] 2026-01-13 07:37:59,117 | INFO     | executing command: cat /etc/os-release
[2026-01-13 05:17:20] 2026-01-13 07:37:59,144 | INFO     | cat /etc/os-release:
[2026-01-13 05:17:20] NAME="CentOS Linux"
[2026-01-13 05:17:20] VERSION="7 (Core)"
[2026-01-13 05:17:20] ID="centos"
[2026-01-13 05:17:20] ID_LIKE="rhel fedora"
[2026-01-13 05:17:20] VERSION_ID="7"
[2026-01-13 05:17:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 05:17:20] ANSI_COLOR="0;31"
[2026-01-13 05:17:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 05:17:20] HOME_URL="https://www.centos.org/"
[2026-01-13 05:17:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 05:17:20] 
[2026-01-13 05:17:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 05:17:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 05:17:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 05:17:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 05:17:20] 
[2026-01-13 05:17:20] 2026-01-13 07:37:59,145 | INFO     | ***************************************
[2026-01-13 05:17:20] 2026-01-13 07:37:59,648 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2026-01-13 05:17:20] 2026-01-13 07:37:59,668 | INFO     | sufficient remaining disk space (70526173184 B)
[2026-01-13 05:17:20] 2026-01-13 07:37:59,668 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 05:17:20] 2026-01-13 07:37:59,668 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 05:17:20] 2026-01-13 07:37:59,668 | INFO     | update_server=False
[2026-01-13 05:17:20] 2026-01-13 07:37:59,668 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 05:17:20] 2026-01-13 07:37:59,669 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 05:17:20] 2026-01-13 07:37:59,670 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 05:17:20] 2026-01-13 07:37:59,670 | INFO     | aborting loop
[2026-01-13 05:17:20] 2026-01-13 07:37:59,671 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 05:17:20] 2026-01-13 07:38:00,213 | INFO     | all data control threads have been joined
[2026-01-13 05:17:20] 2026-01-13 07:38:00,285 | INFO     | all job control threads have been joined
[2026-01-13 05:17:20] 2026-01-13 07:38:00,296 | INFO     | all payload control threads have been joined
[2026-01-13 05:17:20] 2026-01-13 07:38:00,676 | INFO     | [job] job monitor thread has finished
[2026-01-13 05:17:20] 2026-01-13 07:38:00,680 | INFO     | [job] retrieve thread has finished
[2026-01-13 05:17:20] 2026-01-13 07:38:00,815 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 05:17:20] 2026-01-13 07:38:00,996 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 05:17:20] 2026-01-13 07:38:01,099 | INFO     | [data] copytool_in thread has finished
[2026-01-13 05:17:20] 2026-01-13 07:38:01,222 | INFO     | [data] control thread has finished
[2026-01-13 05:17:20] 2026-01-13 07:38:01,290 | INFO     | [job] control thread has finished
[2026-01-13 05:17:20] 2026-01-13 07:38:01,302 | INFO     | [payload] control thread has finished
[2026-01-13 05:17:20] 2026-01-13 07:38:01,526 | INFO     | [payload] validate_post thread has finished
[2026-01-13 05:17:20] 2026-01-13 07:38:01,686 | INFO     | [payload] failed_post thread has finished
[2026-01-13 05:17:20] 2026-01-13 07:38:01,701 | INFO     | [data] copytool_out thread has finished
[2026-01-13 05:17:20] 2026-01-13 07:38:01,861 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 05:17:20] 2026-01-13 07:38:01,909 | INFO     | [job] validate thread has finished
[2026-01-13 05:17:20] 2026-01-13 07:38:02,232 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 05:17:20] 2026-01-13 07:38:03,238 | INFO     | [job] queue monitor thread has finished
[2026-01-13 05:17:20] 2026-01-13 07:38:03,675 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 05:17:20] 2026-01-13 07:38:10,116 | INFO     | job.realtimelogging is not enabled
[2026-01-13 05:17:20] 2026-01-13 07:38:11,123 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 05:17:20] 2026-01-13 07:38:31,294 | INFO     | PID=1796270 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 05:17:20] 2026-01-13 07:38:31,294 | INFO     | .. there are 50 such processes running
[2026-01-13 05:17:20] 2026-01-13 07:38:31,295 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 05:17:20] 2026-01-13 07:38:31,295 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 05:17:20] 2026-01-13 07:38:31,295 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 05:17:20] 2026-01-13 07:38:51,579 | INFO     | [monitor] cgroup control has ended
[2026-01-13 05:17:20] 2026-01-13 07:38:52,530 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140493780023104)>', '<ExcThread(monitor, started 140493061084928)>']
[2026-01-13 05:17:20] 2026-01-13 07:38:53,433 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 05:17:20] 2026-01-13 07:38:53,433 | INFO     | [monitor] control thread has ended
[2026-01-13 05:17:20] 2026-01-13 07:38:57,556 | INFO     | all workflow threads have been joined
[2026-01-13 05:17:20] 2026-01-13 07:38:57,556 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 05:17:20] 2026-01-13 07:38:57,556 | INFO     | traces error code: 0
[2026-01-13 05:17:20] 2026-01-13 07:38:57,557 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 05:17:20] 2026-01-13 07:38:57,667 [wrapper] ==== pilot stdout END ====
[2026-01-13 05:17:20] 2026-01-13 07:38:57,668 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 05:17:20] 2026-01-13 07:38:57,670 [wrapper] pilotpid: 1796270
[2026-01-13 05:17:20] 2026-01-13 07:38:57,672 [wrapper] Pilot exit status: 0
[2026-01-13 05:17:20] 2026-01-13 07:38:57,679 [wrapper] pandaids: 6968277483
[2026-01-13 05:17:20] 2026-01-13 07:38:57,788 [wrapper] cleanup supervisor_pilot 3277670 1796271
[2026-01-13 05:17:20] 2026-01-13 07:38:57,791 [wrapper] Test setup, not cleaning
[2026-01-13 05:17:20] 2026-01-13 07:38:57,796 [wrapper] apfmon messages muted
[2026-01-13 05:17:20] 2026-01-13 07:38:57,801 [wrapper] ==== wrapper stdout END ====
[2026-01-13 05:17:20] 2026-01-13 07:38:57,803 [wrapper] ==== wrapper stderr END ====
[2026-01-13 05:17:20]  *** Error codes and diagnostics ***
[2026-01-13 05:17:20]     "exeErrorCode": 0,
[2026-01-13 05:17:20]     "exeErrorDiag": "",
[2026-01-13 05:17:20]     "pilotErrorCode": 0,
[2026-01-13 05:17:20]     "pilotErrorDiag": "",
[2026-01-13 05:17:20]  *** Listing of results directory ***
[2026-01-13 05:17:20] total 591632
[2026-01-13 05:17:20] -rw-r--r--. 1 boincer umatlas    579449 Jan 12 23:28 pilot3.tar.gz
[2026-01-13 05:17:20] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 00:03 queuedata.json
[2026-01-13 05:17:20] -rwx------. 1 boincer umatlas     36322 Jan 13 00:04 runpilot2-wrapper.sh
[2026-01-13 05:17:20] -rw-r--r--. 1 boincer umatlas       100 Jan 13 00:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 05:17:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 00:09 run_atlas
[2026-01-13 05:17:20] -rw-r--r--. 1 boincer umatlas       105 Jan 13 00:09 job.xml
[2026-01-13 05:17:20] -rw-r--r--. 2 boincer umatlas 317665836 Jan 13 00:09 EVNT.48188654._000006.pool.root.1
[2026-01-13 05:17:20] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 00:09 start_atlas.sh
[2026-01-13 05:17:20] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 00:09 shared
[2026-01-13 05:17:20] -rw-r--r--. 2 boincer umatlas    592414 Jan 13 00:09 input.tar.gz
[2026-01-13 05:17:20] -rw-r--r--. 1 boincer umatlas         0 Jan 13 00:09 boinc_lockfile
[2026-01-13 05:17:20] -rw-r--r--. 1 boincer umatlas      2629 Jan 13 00:09 pandaJob.out
[2026-01-13 05:17:20] -rw-------. 1 boincer umatlas        57 Jan 13 00:09 setup.sh.local
[2026-01-13 05:17:20] -rw-------. 1 boincer umatlas    987755 Jan 13 00:09 agis_schedconf.cvmfs.json
[2026-01-13 05:17:20] -rw-------. 1 boincer umatlas   1516240 Jan 13 00:09 agis_ddmendpoints.agis.ALL.json
[2026-01-13 05:17:20] drwx------. 5 boincer umatlas      4096 Jan 13 00:09 pilot3
[2026-01-13 05:17:20] -rw-r--r--. 1 boincer umatlas       529 Jan 13 02:37 boinc_task_state.xml
[2026-01-13 05:17:20] -rw-------. 1 boincer umatlas 280844869 Jan 13 02:37 HITS.48188657._000141.pool.root.1
[2026-01-13 05:17:20] -rw-------. 1 boincer umatlas      1031 Jan 13 02:37 memory_monitor_summary.json
[2026-01-13 05:17:20] -rw-------. 1 boincer umatlas    498353 Jan 13 02:37 log.48188657._000141.job.log.tgz.1
[2026-01-13 05:17:20] -rw-------. 1 boincer umatlas      7767 Jan 13 02:37 heartbeat.json
[2026-01-13 05:17:20] -rw-------. 1 boincer umatlas        95 Jan 13 02:38 pilot_heartbeat.json
[2026-01-13 05:17:20] -rw-------. 1 boincer umatlas      4896 Jan 13 02:38 pilotlog.txt
[2026-01-13 05:17:20] -rw-------. 1 boincer umatlas   1204655 Jan 13 02:38 log.48188657._000141.job.log.1
[2026-01-13 05:17:20] -rw-------. 1 boincer umatlas       357 Jan 13 02:38 output.list
[2026-01-13 05:17:20] -rw-r--r--. 1 boincer umatlas       620 Jan 13 02:38 runtime_log
[2026-01-13 05:17:20] -rw-------. 1 boincer umatlas   1720320 Jan 13 02:38 result.tar.gz
[2026-01-13 05:17:20] -rw-------. 1 boincer umatlas       652 Jan 13 02:38 zQCMDmQllz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZ4hKDmoTuK7m.diag
[2026-01-13 05:17:20] -rw-r--r--. 1 boincer umatlas      9339 Jan 13 02:38 runtime_log.err
[2026-01-13 05:17:20] -rw-r--r--. 1 boincer umatlas      6944 Jan 13 05:10 init_data.xml
[2026-01-13 05:17:20] -rw-r--r--. 1 boincer umatlas        27 Jan 13 05:17 wrapper_checkpoint.txt
[2026-01-13 05:17:20] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 05:17 boinc_mmap_file
[2026-01-13 05:17:20] -rw-r--r--. 1 boincer umatlas     21254 Jan 13 05:17 stderr.txt
[2026-01-13 05:17:20] HITS file was successfully produced:
[2026-01-13 05:17:20] -rw-------. 1 boincer umatlas 280844869 Jan 13 02:37 shared/HITS.pool.root.1
[2026-01-13 05:17:20]  *** Contents of shared directory: ***
[2026-01-13 05:17:20] total 586768
[2026-01-13 05:17:20] -rw-r--r--. 2 boincer umatlas 317665836 Jan 13 00:09 ATLAS.root_0
[2026-01-13 05:17:20] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 00:09 start_atlas.sh
[2026-01-13 05:17:20] -rw-r--r--. 2 boincer umatlas    592414 Jan 13 00:09 input.tar.gz
[2026-01-13 05:17:20] -rw-------. 1 boincer umatlas 280844869 Jan 13 02:37 HITS.pool.root.1
[2026-01-13 05:17:20] -rw-------. 1 boincer umatlas   1720320 Jan 13 02:38 result.tar.gz
05:17:22 (1768670): run_atlas exited; CPU time 44521.870536
05:17:22 (1768670): called boinc_finish(0)

</stderr_txt>
]]>

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