Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:06:37 (724864): wrapper (7.7.26015): starting
00:06:37 (724864): wrapper: running run_atlas (--nthreads 9)
[2026-01-13 00:06:37] Arguments: --nthreads 9
[2026-01-13 00:06:37] Threads: 9
[2026-01-13 00:06:37] Checking for CVMFS
[2026-01-13 00:06:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 00:06:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 00:06:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 00:06:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 00:06:38] 2.13.3.0 4156 1819 110764 155077 0 214 31209374 32935936 30478 16776704 0 3918492 99.403 5146960 41081 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-13 00:06:38] CVMFS is ok
[2026-01-13 00:06:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 00:06:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 00:06:38] Further information can be found at the LHC@home message board.
[2026-01-13 00:06:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 00:06:38] Checking for apptainer binary...
[2026-01-13 00:06:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 00:06:38] Running /usr/bin/apptainer --version
[2026-01-13 00:06:38] apptainer version 1.4.5-2.el9
[2026-01-13 00:06:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 00:06:39] lc-10-10.aglt2.org
[2026-01-13 00:06:39] apptainer works
[2026-01-13 00:06:39] Set ATHENA_PROC_NUMBER=9
[2026-01-13 00:06:39] Set ATHENA_CORE_NUMBER=9
[2026-01-13 00:06:39] Starting ATLAS job with PandaID=6968277426
[2026-01-13 00:06:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 09:05:41]  *** The last 200 lines of the pilot log: ***
[2026-01-13 09:05:41] 2026-01-13 14:04:31,956 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 09:05:41] 2026-01-13 14:04:32,740 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-13 09:05:41] 2026-01-13 14:04:32,779 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2687.174906249999
[2026-01-13 09:05:41] 2026-01-13 14:04:33,029 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6968277426/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 09:05:41] 2026-01-13 14:04:33,029 | INFO     | extracted standard info from prmon json
[2026-01-13 09:05:41] 2026-01-13 14:04:33,029 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 09:05:41] 2026-01-13 14:04:33,029 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 09:05:41] 2026-01-13 14:04:33,030 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 09:05:41] 2026-01-13 14:04:33,030 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 09:05:41] 2026-01-13 14:04:33,080 | INFO     | fitting pss+swap vs Time
[2026-01-13 09:05:41] 2026-01-13 14:04:33,107 | INFO     | sum of square deviations: 45386369414.15941
[2026-01-13 09:05:41] 2026-01-13 14:04:33,132 | INFO     | sum of deviations: 155030999661.5177
[2026-01-13 09:05:41] 2026-01-13 14:04:33,132 | INFO     | mean x: 1768296955.4174573
[2026-01-13 09:05:41] 2026-01-13 14:04:33,132 | INFO     | mean y: 2617188.356736243
[2026-01-13 09:05:41] 2026-01-13 14:04:33,132 | INFO     | intersect: -6037540864.277928
[2026-01-13 09:05:41] 2026-01-13 14:04:33,154 | INFO     | chi2: 2.5555278855177557
[2026-01-13 09:05:41] 2026-01-13 14:04:33,155 | INFO     | sum of square deviations: 44106836310.62071
[2026-01-13 09:05:41] 2026-01-13 14:04:33,206 | INFO     | sum of deviations: 186872191968.7354
[2026-01-13 09:05:41] 2026-01-13 14:04:33,206 | INFO     | mean x: 1768296802.9195402
[2026-01-13 09:05:41] 2026-01-13 14:04:33,206 | INFO     | mean y: 2620951.5651340997
[2026-01-13 09:05:41] 2026-01-13 14:04:33,206 | INFO     | intersect: -7489312890.294019
[2026-01-13 09:05:41] 2026-01-13 14:04:33,207 | INFO     | chi2: 1.8738680245417403
[2026-01-13 09:05:41] 2026-01-13 14:04:33,207 | INFO     | current chi2=1.8738680245417403 (change=26.673935543376377 %)
[2026-01-13 09:05:41] 2026-01-13 14:04:33,208 | INFO     | sum of square deviations: 42851519411.75635
[2026-01-13 09:05:41] 2026-01-13 14:04:33,260 | INFO     | sum of deviations: 184313664909.17047
[2026-01-13 09:05:41] 2026-01-13 14:04:33,260 | INFO     | mean x: 1768296650.417795
[2026-01-13 09:05:41] 2026-01-13 14:04:33,260 | INFO     | mean y: 2620640.85106383
[2026-01-13 09:05:41] 2026-01-13 14:04:33,260 | INFO     | intersect: -7603206194.677602
[2026-01-13 09:05:41] 2026-01-13 14:04:33,261 | INFO     | chi2: 1.873860224404482
[2026-01-13 09:05:41] 2026-01-13 14:04:33,261 | INFO     | current chi2=1.873860224404482 (change=0.00041625862420196954 %)
[2026-01-13 09:05:41] 2026-01-13 14:04:33,261 | INFO     | right removable region: 516
[2026-01-13 09:05:41] 2026-01-13 14:04:33,262 | INFO     | sum of square deviations: 44106734135.77951
[2026-01-13 09:05:41] 2026-01-13 14:04:33,318 | INFO     | sum of deviations: 53745089222.76436
[2026-01-13 09:05:41] 2026-01-13 14:04:33,319 | INFO     | mean x: 1768297107.9214559
[2026-01-13 09:05:41] 2026-01-13 14:04:33,319 | INFO     | mean y: 2629219.9942528736
[2026-01-13 09:05:41] 2026-01-13 14:04:33,319 | INFO     | intersect: -2152082247.5342464
[2026-01-13 09:05:41] 2026-01-13 14:04:33,320 | INFO     | chi2: 0.9164480979516507
[2026-01-13 09:05:41] 2026-01-13 14:04:33,320 | INFO     | current chi2=0.9164480979516507 (change=64.13859918550737 %)
[2026-01-13 09:05:41] 2026-01-13 14:04:33,320 | INFO     | sum of square deviations: 42851410468.232155
[2026-01-13 09:05:41] 2026-01-13 14:04:33,365 | INFO     | sum of deviations: 20788553718.9633
[2026-01-13 09:05:41] 2026-01-13 14:04:33,365 | INFO     | mean x: 1768297260.4235976
[2026-01-13 09:05:41] 2026-01-13 14:04:33,365 | INFO     | mean y: 2633223.7079303674
[2026-01-13 09:05:41] 2026-01-13 14:04:33,365 | INFO     | intersect: -855222846.5529034
[2026-01-13 09:05:41] 2026-01-13 14:04:33,366 | INFO     | chi2: 0.8004094524624604
[2026-01-13 09:05:41] 2026-01-13 14:04:33,366 | INFO     | current chi2=0.8004094524624604 (change=12.661780383258778 %)
[2026-01-13 09:05:41] 2026-01-13 14:04:33,366 | INFO     | left removable region: 20
[2026-01-13 09:05:41] 2026-01-13 14:04:33,367 | INFO     | sum of square deviations: 37839004837.38706
[2026-01-13 09:05:41] 2026-01-13 14:04:33,413 | INFO     | sum of deviations: 25261064618.499985
[2026-01-13 09:05:41] 2026-01-13 14:04:33,413 | INFO     | mean x: 1768297229.9274194
[2026-01-13 09:05:41] 2026-01-13 14:04:33,413 | INFO     | mean y: 2640469.125
[2026-01-13 09:05:41] 2026-01-13 14:04:33,414 | INFO     | intersect: -1177862844.3705895
[2026-01-13 09:05:41] 2026-01-13 14:04:33,414 | INFO     | chi2: 0.01951488707517075
[2026-01-13 09:05:41] 2026-01-13 14:04:33,414 | INFO     | current memory leak: 0.67 B/s (using 496 data points, chi2=0.02)
[2026-01-13 09:05:41] 2026-01-13 14:04:33,415 | INFO     | could have reported an average CPU frequency of 2679 MHz (21 samples)
[2026-01-13 09:05:41] 2026-01-13 14:04:33,415 | INFO     | ..............................
[2026-01-13 09:05:41] 2026-01-13 14:04:33,415 | INFO     | . Timing measurements:
[2026-01-13 09:05:41] 2026-01-13 14:04:33,437 | INFO     | . get job = 0 s
[2026-01-13 09:05:41] 2026-01-13 14:04:33,437 | INFO     | . initial setup = 5 s
[2026-01-13 09:05:41] 2026-01-13 14:04:33,437 | INFO     | . payload setup = 21 s
[2026-01-13 09:05:41] 2026-01-13 14:04:33,437 | INFO     | . stage-in = 0 s
[2026-01-13 09:05:41] 2026-01-13 14:04:33,437 | INFO     | . payload execution = 32139 s
[2026-01-13 09:05:41] 2026-01-13 14:04:33,437 | INFO     | . stage-out = 8 s
[2026-01-13 09:05:41] 2026-01-13 14:04:33,437 | INFO     | . log creation = 0 s
[2026-01-13 09:05:41] 2026-01-13 14:04:33,437 | INFO     | ..............................
[2026-01-13 09:05:41] 2026-01-13 14:04:33,646 | INFO     | time since job start (32242s) is within the limit (349056.0s)
[2026-01-13 09:05:41] 2026-01-13 14:04:34,048 | INFO     | 
[2026-01-13 09:05:41] 2026-01-13 14:04:34,048 | INFO     | job summary report
[2026-01-13 09:05:41] 2026-01-13 14:04:34,048 | INFO     | --------------------------------------------------
[2026-01-13 09:05:41] 2026-01-13 14:04:34,048 | INFO     | PanDA job id: 6968277426
[2026-01-13 09:05:41] 2026-01-13 14:04:34,048 | INFO     | task id: 48188657
[2026-01-13 09:05:41] 2026-01-13 14:04:34,048 | INFO     | errors: (none)
[2026-01-13 09:05:41] 2026-01-13 14:04:34,048 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 09:05:41] 2026-01-13 14:04:34,048 | INFO     | pilot state: finished 
[2026-01-13 09:05:41] 2026-01-13 14:04:34,048 | INFO     | transexitcode: 0
[2026-01-13 09:05:41] 2026-01-13 14:04:34,048 | INFO     | exeerrorcode: 0
[2026-01-13 09:05:41] 2026-01-13 14:04:34,049 | INFO     | exeerrordiag: 
[2026-01-13 09:05:41] 2026-01-13 14:04:34,049 | INFO     | exitcode: 0
[2026-01-13 09:05:41] 2026-01-13 14:04:34,049 | INFO     | exitmsg: OK
[2026-01-13 09:05:41] 2026-01-13 14:04:34,049 | INFO     | cpuconsumptiontime: 62895 s
[2026-01-13 09:05:41] 2026-01-13 14:04:34,049 | INFO     | nevents: 400
[2026-01-13 09:05:41] 2026-01-13 14:04:34,049 | INFO     | neventsw: 0
[2026-01-13 09:05:41] 2026-01-13 14:04:34,049 | INFO     | pid: 796932
[2026-01-13 09:05:41] 2026-01-13 14:04:34,049 | INFO     | pgrp: 796932
[2026-01-13 09:05:41] 2026-01-13 14:04:34,049 | INFO     | corecount: 9
[2026-01-13 09:05:41] 2026-01-13 14:04:34,049 | INFO     | event service: False
[2026-01-13 09:05:41] 2026-01-13 14:04:34,049 | INFO     | sizes: {0: 2283950, 1: 2284149, 12: 2284149, 20: 2284439, 23: 2284467, 32166: 2322986, 32176: 2332040, 32204: 2332178}
[2026-01-13 09:05:41] 2026-01-13 14:04:34,049 | INFO     | --------------------------------------------------
[2026-01-13 09:05:41] 2026-01-13 14:04:34,049 | INFO     | 
[2026-01-13 09:05:41] 2026-01-13 14:04:34,049 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2026-01-13 09:05:41] 2026-01-13 14:04:34,171 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 09:05:41] 2026-01-13 14:04:34,172 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 09:05:41] 2026-01-13 14:04:34,172 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 09:05:41] 2026-01-13 14:04:34,172 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 09:05:41] 2026-01-13 14:04:34,172 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 09:05:41] 2026-01-13 14:04:34,172 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 09:05:41] 2026-01-13 14:04:34,172 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 09:05:41] 2026-01-13 14:04:34,172 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 09:05:41] 2026-01-13 14:04:34,172 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 09:05:41] 2026-01-13 14:04:34,172 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 09:05:41] 2026-01-13 14:04:34,172 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 09:05:41] 2026-01-13 14:04:34,173 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 09:05:41] 2026-01-13 14:04:34,173 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 09:05:41] 2026-01-13 14:04:34,173 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 09:05:41] 2026-01-13 14:04:34,173 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 09:05:41] 2026-01-13 14:04:34,173 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 09:05:41] 2026-01-13 14:04:34,173 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 09:05:41] 2026-01-13 14:04:34,173 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 09:05:41] 2026-01-13 14:04:34,173 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 09:05:41] 2026-01-13 14:04:34,173 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 09:05:41] 2026-01-13 14:04:34,173 | INFO     | job 6968277426 has completed (purged errors)
[2026-01-13 09:05:41] 2026-01-13 14:04:34,173 | INFO     | overall cleanup function is called
[2026-01-13 09:05:41] 2026-01-13 14:04:35,187 | INFO     | --- collectZombieJob: --- 10, [796932]
[2026-01-13 09:05:41] 2026-01-13 14:04:35,187 | INFO     | zombie collector waiting for pid 796932
[2026-01-13 09:05:41] 2026-01-13 14:04:35,187 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 09:05:41] 2026-01-13 14:04:35,187 | INFO     | collected zombie processes
[2026-01-13 09:05:41] 2026-01-13 14:04:35,187 | INFO     | will attempt to kill all subprocesses of pid=796932
[2026-01-13 09:05:41] 2026-01-13 14:04:36,878 | INFO     | process IDs to be killed: [796932] (in reverse order)
[2026-01-13 09:05:41] 2026-01-13 14:04:37,191 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 09:05:41] 2026-01-13 14:04:37,191 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 09:05:41] 2026-01-13 14:04:37,242 | INFO     | did not find any defunct processes belonging to 796932
[2026-01-13 09:05:41] 2026-01-13 14:04:37,317 | INFO     | did not find any defunct processes belonging to 796932
[2026-01-13 09:05:41] 2026-01-13 14:04:37,317 | INFO     | ready for new job
[2026-01-13 09:05:41] 2026-01-13 14:04:37,317 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 09:05:41] 2026-01-13 14:04:37,340 | INFO     | ***************************************
[2026-01-13 09:05:41] 2026-01-13 14:04:37,340 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 09:05:41] 2026-01-13 14:04:37,341 | INFO     | ***************************************
[2026-01-13 09:05:41] 2026-01-13 14:04:37,341 | INFO     | 
[2026-01-13 09:05:41] 2026-01-13 14:04:37,358 | INFO     | architecture information:
[2026-01-13 09:05:41] 2026-01-13 14:04:37,359 | INFO     | executing command: cat /etc/os-release
[2026-01-13 09:05:41] 2026-01-13 14:04:37,461 | INFO     | cat /etc/os-release:
[2026-01-13 09:05:41] NAME="CentOS Linux"
[2026-01-13 09:05:41] VERSION="7 (Core)"
[2026-01-13 09:05:41] ID="centos"
[2026-01-13 09:05:41] ID_LIKE="rhel fedora"
[2026-01-13 09:05:41] VERSION_ID="7"
[2026-01-13 09:05:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 09:05:41] ANSI_COLOR="0;31"
[2026-01-13 09:05:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 09:05:41] HOME_URL="https://www.centos.org/"
[2026-01-13 09:05:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 09:05:41] 
[2026-01-13 09:05:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 09:05:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 09:05:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 09:05:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 09:05:41] 
[2026-01-13 09:05:41] 2026-01-13 14:04:37,461 | INFO     | ***************************************
[2026-01-13 09:05:41] 2026-01-13 14:04:37,965 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2026-01-13 09:05:41] 2026-01-13 14:04:38,071 | INFO     | sufficient remaining disk space (84425048064 B)
[2026-01-13 09:05:41] 2026-01-13 14:04:38,071 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 09:05:41] 2026-01-13 14:04:38,071 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 09:05:41] 2026-01-13 14:04:38,072 | INFO     | update_server=False
[2026-01-13 09:05:41] 2026-01-13 14:04:38,072 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 09:05:41] 2026-01-13 14:04:38,072 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 09:05:41] 2026-01-13 14:04:38,076 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 09:05:41] 2026-01-13 14:04:38,076 | INFO     | aborting loop
[2026-01-13 09:05:41] 2026-01-13 14:04:38,223 | INFO     | all data control threads have been joined
[2026-01-13 09:05:41] 2026-01-13 14:04:39,058 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 09:05:41] 2026-01-13 14:04:39,077 | INFO     | [job] retrieve thread has finished
[2026-01-13 09:05:41] 2026-01-13 14:04:39,082 | INFO     | [job] job monitor thread has finished
[2026-01-13 09:05:41] 2026-01-13 14:04:39,232 | INFO     | [data] control thread has finished
[2026-01-13 09:05:41] 2026-01-13 14:04:39,262 | INFO     | [payload] failed_post thread has finished
[2026-01-13 09:05:41] 2026-01-13 14:04:39,424 | INFO     | all job control threads have been joined
[2026-01-13 09:05:41] 2026-01-13 14:04:39,426 | INFO     | all payload control threads have been joined
[2026-01-13 09:05:41] 2026-01-13 14:04:39,459 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 09:05:41] 2026-01-13 14:04:40,057 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 09:05:41] 2026-01-13 14:04:40,064 | INFO     | [job] queue monitor thread has finished
[2026-01-13 09:05:41] 2026-01-13 14:04:40,079 | INFO     | [data] copytool_out thread has finished
[2026-01-13 09:05:41] 2026-01-13 14:04:40,083 | INFO     | [job] validate thread has finished
[2026-01-13 09:05:41] 2026-01-13 14:04:40,102 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 09:05:41] 2026-01-13 14:04:40,106 | INFO     | [data] copytool_in thread has finished
[2026-01-13 09:05:41] 2026-01-13 14:04:40,106 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 09:05:41] 2026-01-13 14:04:40,110 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 09:05:41] 2026-01-13 14:04:40,215 | INFO     | [payload] validate_post thread has finished
[2026-01-13 09:05:41] 2026-01-13 14:04:40,430 | INFO     | [job] control thread has finished
[2026-01-13 09:05:41] 2026-01-13 14:04:40,432 | INFO     | [payload] control thread has finished
[2026-01-13 09:05:41] 2026-01-13 14:04:44,075 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 09:05:41] 2026-01-13 14:05:09,320 | INFO     | PID=746065 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-13 09:05:41] 2026-01-13 14:05:09,320 | INFO     | .. there are 66 such processes running
[2026-01-13 09:05:41] 2026-01-13 14:05:09,321 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 09:05:41] 2026-01-13 14:05:09,321 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 09:05:41] 2026-01-13 14:05:09,321 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 09:05:41] 2026-01-13 14:05:11,959 | INFO     | [monitor] cgroup control has ended
[2026-01-13 09:05:41] 2026-01-13 14:05:13,623 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139828593026880)>', '<ExcThread(monitor, started 139828312114944)>']
[2026-01-13 09:05:41] 2026-01-13 14:05:14,364 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 09:05:41] 2026-01-13 14:05:14,364 | INFO     | [monitor] control thread has ended
[2026-01-13 09:05:41] 2026-01-13 14:05:18,651 | INFO     | all workflow threads have been joined
[2026-01-13 09:05:41] 2026-01-13 14:05:18,651 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 09:05:41] 2026-01-13 14:05:18,651 | INFO     | traces error code: 0
[2026-01-13 09:05:41] 2026-01-13 14:05:18,651 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 09:05:41] 2026-01-13 14:05:19,027 [wrapper] ==== pilot stdout END ====
[2026-01-13 09:05:41] 2026-01-13 14:05:19,051 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 09:05:41] 2026-01-13 14:05:19,088 [wrapper] pilotpid: 746065
[2026-01-13 09:05:41] 2026-01-13 14:05:19,100 [wrapper] Pilot exit status: 0
[2026-01-13 09:05:41] 2026-01-13 14:05:19,224 [wrapper] pandaids: 6968277426
[2026-01-13 09:05:41] 2026-01-13 14:05:19,875 [wrapper] cleanup supervisor_pilot  382375 746066
[2026-01-13 09:05:41] 2026-01-13 14:05:19,884 [wrapper] Test setup, not cleaning
[2026-01-13 09:05:41] 2026-01-13 14:05:19,902 [wrapper] apfmon messages muted
[2026-01-13 09:05:41] 2026-01-13 14:05:19,925 [wrapper] ==== wrapper stdout END ====
[2026-01-13 09:05:41] 2026-01-13 14:05:19,969 [wrapper] ==== wrapper stderr END ====
[2026-01-13 09:05:41]  *** Error codes and diagnostics ***
[2026-01-13 09:05:41]     "exeErrorCode": 0,
[2026-01-13 09:05:41]     "exeErrorDiag": "",
[2026-01-13 09:05:41]     "pilotErrorCode": 0,
[2026-01-13 09:05:41]     "pilotErrorDiag": "",
[2026-01-13 09:05:41]  *** Listing of results directory ***
[2026-01-13 09:05:41] total 600480
[2026-01-13 09:05:41] -rw-r--r--. 1 boincer umatlas    579449 Jan 12 23:28 pilot3.tar.gz
[2026-01-13 09:05:41] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 00:03 queuedata.json
[2026-01-13 09:05:41] -rwx------. 1 boincer umatlas     36322 Jan 13 00:04 runpilot2-wrapper.sh
[2026-01-13 09:05:41] -rw-r--r--. 1 boincer umatlas       100 Jan 13 00:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 09:05:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 00:06 run_atlas
[2026-01-13 09:05:41] -rw-r--r--. 1 boincer umatlas       105 Jan 13 00:06 job.xml
[2026-01-13 09:05:41] -rw-r--r--. 2 boincer umatlas 323205416 Jan 13 00:06 EVNT.48188654._000004.pool.root.1
[2026-01-13 09:05:41] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 00:06 start_atlas.sh
[2026-01-13 09:05:41] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 00:06 shared
[2026-01-13 09:05:41] -rw-r--r--. 2 boincer umatlas    592413 Jan 13 00:06 input.tar.gz
[2026-01-13 09:05:41] -rw-r--r--. 1 boincer umatlas         0 Jan 13 00:06 boinc_lockfile
[2026-01-13 09:05:41] -rw-r--r--. 1 boincer umatlas      2627 Jan 13 00:06 pandaJob.out
[2026-01-13 09:05:41] -rw-------. 1 boincer umatlas        57 Jan 13 00:06 setup.sh.local
[2026-01-13 09:05:41] -rw-------. 1 boincer umatlas    987755 Jan 13 00:07 agis_schedconf.cvmfs.json
[2026-01-13 09:05:41] drwx------. 5 boincer umatlas      4096 Jan 13 00:07 pilot3
[2026-01-13 09:05:41] -rw-r--r--. 1 boincer umatlas      6862 Jan 13 08:55 init_data.xml
[2026-01-13 09:05:41] -rw-------. 1 boincer umatlas 279222419 Jan 13 09:02 HITS.48188657._000084.pool.root.1
[2026-01-13 09:05:41] -rw-r--r--. 1 boincer umatlas       529 Jan 13 09:02 boinc_task_state.xml
[2026-01-13 09:05:41] -rw-------. 1 boincer umatlas      1045 Jan 13 09:03 memory_monitor_summary.json
[2026-01-13 09:05:41] -rw-------. 1 boincer umatlas   1516246 Jan 13 09:04 agis_ddmendpoints.agis.ALL.json
[2026-01-13 09:05:41] -rw-------. 1 boincer umatlas    715794 Jan 13 09:04 log.48188657._000084.job.log.tgz.1
[2026-01-13 09:05:41] -rw-------. 1 boincer umatlas        95 Jan 13 09:04 pilot_heartbeat.json
[2026-01-13 09:05:41] -rw-------. 1 boincer umatlas      7815 Jan 13 09:04 heartbeat.json
[2026-01-13 09:05:41] -rw-------. 1 boincer umatlas      4823 Jan 13 09:05 pilotlog.txt
[2026-01-13 09:05:41] -rw-------. 1 boincer umatlas   3558975 Jan 13 09:05 log.48188657._000084.job.log.1
[2026-01-13 09:05:41] -rw-------. 1 boincer umatlas       357 Jan 13 09:05 output.list
[2026-01-13 09:05:41] -rw-r--r--. 1 boincer umatlas       620 Jan 13 09:05 runtime_log
[2026-01-13 09:05:41] -rw-------. 1 boincer umatlas   4290560 Jan 13 09:05 result.tar.gz
[2026-01-13 09:05:41] -rw-r--r--. 1 boincer umatlas      9343 Jan 13 09:05 runtime_log.err
[2026-01-13 09:05:41] -rw-------. 1 boincer umatlas       657 Jan 13 09:05 lAPLDmQllz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmA4hKDmkSNuDn.diag
[2026-01-13 09:05:41] -rw-r--r--. 1 boincer umatlas        27 Jan 13 09:05 wrapper_checkpoint.txt
[2026-01-13 09:05:41] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 09:05 boinc_mmap_file
[2026-01-13 09:05:41] -rw-r--r--. 1 boincer umatlas     21180 Jan 13 09:05 stderr.txt
[2026-01-13 09:05:42] HITS file was successfully produced:
[2026-01-13 09:05:42] -rw-------. 1 boincer umatlas 279222419 Jan 13 09:02 shared/HITS.pool.root.1
[2026-01-13 09:05:42]  *** Contents of shared directory: ***
[2026-01-13 09:05:42] total 593108
[2026-01-13 09:05:42] -rw-r--r--. 2 boincer umatlas 323205416 Jan 13 00:06 ATLAS.root_0
[2026-01-13 09:05:42] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 00:06 start_atlas.sh
[2026-01-13 09:05:42] -rw-r--r--. 2 boincer umatlas    592413 Jan 13 00:06 input.tar.gz
[2026-01-13 09:05:42] -rw-------. 1 boincer umatlas 279222419 Jan 13 09:02 HITS.pool.root.1
[2026-01-13 09:05:42] -rw-------. 1 boincer umatlas   4290560 Jan 13 09:05 result.tar.gz
09:05:43 (724864): run_atlas exited; CPU time 64814.432349
09:05:43 (724864): called boinc_finish(0)

</stderr_txt>
]]>

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