Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:43 (3211807): wrapper (7.7.26015): starting
00:04:43 (3211807): wrapper: running run_atlas (--nthreads 11)
[2026-01-13 00:04:43] Arguments: --nthreads 11
[2026-01-13 00:04:43] Threads: 11
[2026-01-13 00:04:43] Checking for CVMFS
[2026-01-13 00:04:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 00:04:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 00:04:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 00:04:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 00:04:45] 2.13.3.0 12531 98724 403368 155077 1 174 31950609 40960001 26476 16776704 0 417110852 99.644 400437693 37876 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-13 00:04:45] CVMFS is ok
[2026-01-13 00:04:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 00:04:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 00:04:45] Further information can be found at the LHC@home message board.
[2026-01-13 00:04:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 00:04:45] Checking for apptainer binary...
[2026-01-13 00:04:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 00:04:45] Running /usr/bin/apptainer --version
[2026-01-13 00:04:45] apptainer version 1.4.5-2.el9
[2026-01-13 00:04:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 00:04:45] c7-13-33.aglt2.org
[2026-01-13 00:04:45] apptainer works
[2026-01-13 00:04:46] Set ATHENA_PROC_NUMBER=11
[2026-01-13 00:04:46] Set ATHENA_CORE_NUMBER=11
[2026-01-13 00:04:46] Starting ATLAS job with PandaID=6968277348
[2026-01-13 00:04:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 12:54:10]  *** The last 200 lines of the pilot log: ***
[2026-01-13 12:54:10] 2026-01-13 17:53:29,706 | INFO     | monitor loop #2727: job 0:6968277348 is in state 'finished'
[2026-01-13 12:54:10] 2026-01-13 17:53:29,706 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 12:54:10] 2026-01-13 17:53:29,817 | INFO     | time since job start (46081s) is within the limit (349056.0s)
[2026-01-13 12:54:10] 2026-01-13 17:53:31,824 | INFO     | time since job start (46083s) is within the limit (349056.0s)
[2026-01-13 12:54:10] 2026-01-13 17:53:32,213 | INFO     | monitor loop #2728: job 0:6968277348 is in state 'finished'
[2026-01-13 12:54:10] 2026-01-13 17:53:32,213 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 12:54:10] 2026-01-13 17:53:33,834 | INFO     | time since job start (46085s) is within the limit (349056.0s)
[2026-01-13 12:54:10] 2026-01-13 17:53:34,716 | INFO     | monitor loop #2729: job 0:6968277348 is in state 'finished'
[2026-01-13 12:54:10] 2026-01-13 17:53:34,716 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 12:54:10] 2026-01-13 17:53:35,190 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 12:54:10] 2026-01-13 17:53:35,194 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3290.1034843750012
[2026-01-13 12:54:10] 2026-01-13 17:53:35,204 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6968277348/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 12:54:10] 2026-01-13 17:53:35,204 | INFO     | extracted standard info from prmon json
[2026-01-13 12:54:10] 2026-01-13 17:53:35,204 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 12:54:10] 2026-01-13 17:53:35,204 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 12:54:10] 2026-01-13 17:53:35,205 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 12:54:10] 2026-01-13 17:53:35,205 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 12:54:10] 2026-01-13 17:53:35,214 | INFO     | fitting pss+swap vs Time
[2026-01-13 12:54:10] 2026-01-13 17:53:35,215 | INFO     | sum of square deviations: 132919715759.4019
[2026-01-13 12:54:10] 2026-01-13 17:53:35,226 | INFO     | sum of deviations: 1879658831553.0342
[2026-01-13 12:54:10] 2026-01-13 17:53:35,226 | INFO     | mean x: 1768303784.5822282
[2026-01-13 12:54:10] 2026-01-13 17:53:35,226 | INFO     | mean y: 2629577.539787798
[2026-01-13 12:54:10] 2026-01-13 17:53:35,226 | INFO     | intersect: -25003501428.45083
[2026-01-13 12:54:10] 2026-01-13 17:53:35,227 | INFO     | chi2: 15.146866739815778
[2026-01-13 12:54:10] 2026-01-13 17:53:35,228 | INFO     | sum of square deviations: 130292922626.86847
[2026-01-13 12:54:10] 2026-01-13 17:53:35,238 | INFO     | sum of deviations: 1970162652095.289
[2026-01-13 12:54:10] 2026-01-13 17:53:35,238 | INFO     | mean x: 1768303632.082777
[2026-01-13 12:54:10] 2026-01-13 17:53:35,239 | INFO     | mean y: 2634807.0921228305
[2026-01-13 12:54:10] 2026-01-13 17:53:35,239 | INFO     | intersect: -26735930137.612804
[2026-01-13 12:54:10] 2026-01-13 17:53:35,239 | INFO     | chi2: 13.73484340155918
[2026-01-13 12:54:10] 2026-01-13 17:53:35,239 | INFO     | current chi2=13.73484340155918 (change=9.32221404275569 %)
[2026-01-13 12:54:10] 2026-01-13 17:53:35,239 | INFO     | right removable region: 748
[2026-01-13 12:54:10] 2026-01-13 17:53:35,240 | INFO     | sum of square deviations: 130292884806.86848
[2026-01-13 12:54:10] 2026-01-13 17:53:35,250 | INFO     | sum of deviations: 1621745148990.1738
[2026-01-13 12:54:10] 2026-01-13 17:53:35,250 | INFO     | mean x: 1768303937.082777
[2026-01-13 12:54:10] 2026-01-13 17:53:35,250 | INFO     | mean y: 2644546.416555407
[2026-01-13 12:54:10] 2026-01-13 17:53:35,251 | INFO     | intersect: -22007293572.26914
[2026-01-13 12:54:10] 2026-01-13 17:53:35,251 | INFO     | chi2: 11.327630882127785
[2026-01-13 12:54:10] 2026-01-13 17:53:35,251 | INFO     | current chi2=11.327630882127785 (change=25.214692406638573 %)
[2026-01-13 12:54:10] 2026-01-13 17:53:35,252 | INFO     | sum of square deviations: 127700891716.8335
[2026-01-13 12:54:10] 2026-01-13 17:53:35,262 | INFO     | sum of deviations: 1395937676466.4998
[2026-01-13 12:54:10] 2026-01-13 17:53:35,262 | INFO     | mean x: 1768304089.5833333
[2026-01-13 12:54:10] 2026-01-13 17:53:35,262 | INFO     | mean y: 2657830.2983870967
[2026-01-13 12:54:10] 2026-01-13 17:53:35,262 | INFO     | intersect: -19327217387.587646
[2026-01-13 12:54:10] 2026-01-13 17:53:35,263 | INFO     | chi2: 8.552557944320494
[2026-01-13 12:54:10] 2026-01-13 17:53:35,263 | INFO     | current chi2=8.552557944320494 (change=24.49826417089273 %)
[2026-01-13 12:54:10] 2026-01-13 17:53:35,263 | INFO     | left removable region: 20
[2026-01-13 12:54:10] 2026-01-13 17:53:35,264 | INFO     | sum of square deviations: 119637960760.71991
[2026-01-13 12:54:10] 2026-01-13 17:53:35,273 | INFO     | sum of deviations: 1102763825257.4053
[2026-01-13 12:54:10] 2026-01-13 17:53:35,273 | INFO     | mean x: 1768304211.5851648
[2026-01-13 12:54:10] 2026-01-13 17:53:35,273 | INFO     | mean y: 2686523.7596153845
[2026-01-13 12:54:10] 2026-01-13 17:53:35,273 | INFO     | intersect: -16296671173.305685
[2026-01-13 12:54:10] 2026-01-13 17:53:35,274 | INFO     | chi2: 3.2050839504067565
[2026-01-13 12:54:10] 2026-01-13 17:53:35,274 | INFO     | current memory leak: 9.22 B/s (using 728 data points, chi2=3.21)
[2026-01-13 12:54:10] 2026-01-13 17:53:35,275 | INFO     | could have reported an average CPU frequency of 3290 MHz (29 samples)
[2026-01-13 12:54:10] 2026-01-13 17:53:35,275 | INFO     | ..............................
[2026-01-13 12:54:10] 2026-01-13 17:53:35,275 | INFO     | . Timing measurements:
[2026-01-13 12:54:10] 2026-01-13 17:53:35,275 | INFO     | . get job = 1 s
[2026-01-13 12:54:10] 2026-01-13 17:53:35,275 | INFO     | . initial setup = 3 s
[2026-01-13 12:54:10] 2026-01-13 17:53:35,275 | INFO     | . payload setup = 28 s
[2026-01-13 12:54:10] 2026-01-13 17:53:35,275 | INFO     | . stage-in = 0 s
[2026-01-13 12:54:10] 2026-01-13 17:53:35,276 | INFO     | . payload execution = 45994 s
[2026-01-13 12:54:10] 2026-01-13 17:53:35,276 | INFO     | . stage-out = 7 s
[2026-01-13 12:54:10] 2026-01-13 17:53:35,276 | INFO     | . log creation = 0 s
[2026-01-13 12:54:10] 2026-01-13 17:53:35,276 | INFO     | ..............................
[2026-01-13 12:54:10] 2026-01-13 17:53:35,437 | INFO     | 
[2026-01-13 12:54:10] 2026-01-13 17:53:35,438 | INFO     | job summary report
[2026-01-13 12:54:10] 2026-01-13 17:53:35,438 | INFO     | --------------------------------------------------
[2026-01-13 12:54:10] 2026-01-13 17:53:35,438 | INFO     | PanDA job id: 6968277348
[2026-01-13 12:54:10] 2026-01-13 17:53:35,438 | INFO     | task id: 48188657
[2026-01-13 12:54:10] 2026-01-13 17:53:35,438 | INFO     | errors: (none)
[2026-01-13 12:54:10] 2026-01-13 17:53:35,438 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 12:54:10] 2026-01-13 17:53:35,438 | INFO     | pilot state: finished 
[2026-01-13 12:54:10] 2026-01-13 17:53:35,438 | INFO     | transexitcode: 0
[2026-01-13 12:54:10] 2026-01-13 17:53:35,438 | INFO     | exeerrorcode: 0
[2026-01-13 12:54:10] 2026-01-13 17:53:35,438 | INFO     | exeerrordiag: 
[2026-01-13 12:54:10] 2026-01-13 17:53:35,438 | INFO     | exitcode: 0
[2026-01-13 12:54:10] 2026-01-13 17:53:35,438 | INFO     | exitmsg: OK
[2026-01-13 12:54:10] 2026-01-13 17:53:35,439 | INFO     | cpuconsumptiontime: 47881 s
[2026-01-13 12:54:10] 2026-01-13 17:53:35,439 | INFO     | nevents: 400
[2026-01-13 12:54:10] 2026-01-13 17:53:35,439 | INFO     | neventsw: 0
[2026-01-13 12:54:10] 2026-01-13 17:53:35,439 | INFO     | pid: 3233994
[2026-01-13 12:54:10] 2026-01-13 17:53:35,439 | INFO     | pgrp: 3233994
[2026-01-13 12:54:10] 2026-01-13 17:53:35,439 | INFO     | corecount: 11
[2026-01-13 12:54:10] 2026-01-13 17:53:35,439 | INFO     | event service: False
[2026-01-13 12:54:10] 2026-01-13 17:53:35,439 | INFO     | sizes: {0: 2283887, 1: 2284142, 2: 2284142, 13: 2284170, 14: 2284488, 23: 2284516, 46028: 2329699, 46029: 2329698, 46037: 2338780, 46038: 2338836, 46050: 2339030}
[2026-01-13 12:54:10] 2026-01-13 17:53:35,439 | INFO     | --------------------------------------------------
[2026-01-13 12:54:10] 2026-01-13 17:53:35,439 | INFO     | 
[2026-01-13 12:54:10] 2026-01-13 17:53:35,439 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-13 12:54:10] 2026-01-13 17:53:35,666 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 12:54:10] 2026-01-13 17:53:35,666 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 12:54:10] 2026-01-13 17:53:35,666 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 12:54:10] 2026-01-13 17:53:35,666 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 12:54:10] 2026-01-13 17:53:35,666 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 12:54:10] 2026-01-13 17:53:35,666 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 12:54:10] 2026-01-13 17:53:35,666 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 12:54:10] 2026-01-13 17:53:35,667 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 12:54:10] 2026-01-13 17:53:35,667 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 12:54:10] 2026-01-13 17:53:35,667 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 12:54:10] 2026-01-13 17:53:35,667 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 12:54:10] 2026-01-13 17:53:35,667 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 12:54:10] 2026-01-13 17:53:35,667 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 12:54:10] 2026-01-13 17:53:35,667 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 12:54:10] 2026-01-13 17:53:35,667 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 12:54:10] 2026-01-13 17:53:35,667 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 12:54:10] 2026-01-13 17:53:35,667 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 12:54:10] 2026-01-13 17:53:35,667 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 12:54:10] 2026-01-13 17:53:35,667 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 12:54:10] 2026-01-13 17:53:35,667 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 12:54:10] 2026-01-13 17:53:35,668 | INFO     | job 6968277348 has completed (purged errors)
[2026-01-13 12:54:10] 2026-01-13 17:53:35,668 | INFO     | overall cleanup function is called
[2026-01-13 12:54:10] 2026-01-13 17:53:36,702 | INFO     | --- collectZombieJob: --- 10, [3233994]
[2026-01-13 12:54:10] 2026-01-13 17:53:36,703 | INFO     | zombie collector waiting for pid 3233994
[2026-01-13 12:54:10] 2026-01-13 17:53:36,703 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 12:54:10] 2026-01-13 17:53:36,703 | INFO     | collected zombie processes
[2026-01-13 12:54:10] 2026-01-13 17:53:36,703 | INFO     | will attempt to kill all subprocesses of pid=3233994
[2026-01-13 12:54:10] 2026-01-13 17:53:39,319 | INFO     | process IDs to be killed: [3233994] (in reverse order)
[2026-01-13 12:54:10] 2026-01-13 17:53:39,764 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 12:54:10] 2026-01-13 17:53:39,764 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 12:54:10] 2026-01-13 17:53:39,900 | INFO     | did not find any defunct processes belonging to 3233994
[2026-01-13 12:54:10] 2026-01-13 17:53:39,957 | INFO     | did not find any defunct processes belonging to 3233994
[2026-01-13 12:54:10] 2026-01-13 17:53:39,957 | INFO     | ready for new job
[2026-01-13 12:54:10] 2026-01-13 17:53:39,957 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 12:54:10] 2026-01-13 17:53:39,962 | INFO     | ***************************************
[2026-01-13 12:54:10] 2026-01-13 17:53:40,000 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 12:54:10] 2026-01-13 17:53:40,000 | INFO     | ***************************************
[2026-01-13 12:54:10] 2026-01-13 17:53:40,000 | INFO     | 
[2026-01-13 12:54:10] 2026-01-13 17:53:40,033 | INFO     | architecture information:
[2026-01-13 12:54:10] 2026-01-13 17:53:40,040 | INFO     | executing command: cat /etc/os-release
[2026-01-13 12:54:10] 2026-01-13 17:53:40,266 | INFO     | cat /etc/os-release:
[2026-01-13 12:54:10] NAME="CentOS Linux"
[2026-01-13 12:54:10] VERSION="7 (Core)"
[2026-01-13 12:54:10] ID="centos"
[2026-01-13 12:54:10] ID_LIKE="rhel fedora"
[2026-01-13 12:54:10] VERSION_ID="7"
[2026-01-13 12:54:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 12:54:10] ANSI_COLOR="0;31"
[2026-01-13 12:54:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 12:54:10] HOME_URL="https://www.centos.org/"
[2026-01-13 12:54:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 12:54:10] 
[2026-01-13 12:54:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 12:54:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 12:54:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 12:54:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 12:54:10] 
[2026-01-13 12:54:10] 2026-01-13 17:53:40,266 | INFO     | ***************************************
[2026-01-13 12:54:10] 2026-01-13 17:53:40,770 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-13 12:54:10] 2026-01-13 17:53:40,917 | INFO     | sufficient remaining disk space (81297145856 B)
[2026-01-13 12:54:10] 2026-01-13 17:53:40,917 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 12:54:10] 2026-01-13 17:53:40,917 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 12:54:10] 2026-01-13 17:53:40,917 | INFO     | update_server=False
[2026-01-13 12:54:10] 2026-01-13 17:53:40,917 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 12:54:10] 2026-01-13 17:53:40,919 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 12:54:10] 2026-01-13 17:53:40,926 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 12:54:10] 2026-01-13 17:53:40,926 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 12:54:10] 2026-01-13 17:53:40,926 | INFO     | aborting loop
[2026-01-13 12:54:10] 2026-01-13 17:53:41,350 | INFO     | all data control threads have been joined
[2026-01-13 12:54:10] 2026-01-13 17:53:41,924 | INFO     | [job] retrieve thread has finished
[2026-01-13 12:54:10] 2026-01-13 17:53:41,932 | INFO     | [job] queue monitor thread has finished
[2026-01-13 12:54:10] 2026-01-13 17:53:41,932 | INFO     | [job] job monitor thread has finished
[2026-01-13 12:54:10] 2026-01-13 17:53:42,161 | INFO     | all payload control threads have been joined
[2026-01-13 12:54:10] 2026-01-13 17:53:42,285 | INFO     | [data] copytool_in thread has finished
[2026-01-13 12:54:10] 2026-01-13 17:53:42,296 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 12:54:10] 2026-01-13 17:53:42,319 | INFO     | all job control threads have been joined
[2026-01-13 12:54:10] 2026-01-13 17:53:42,357 | INFO     | [data] control thread has finished
[2026-01-13 12:54:10] 2026-01-13 17:53:42,610 | INFO     | [payload] failed_post thread has finished
[2026-01-13 12:54:10] 2026-01-13 17:53:42,714 | INFO     | [job] validate thread has finished
[2026-01-13 12:54:10] 2026-01-13 17:53:42,796 | INFO     | [payload] validate_post thread has finished
[2026-01-13 12:54:10] 2026-01-13 17:53:42,926 | INFO     | [data] copytool_out thread has finished
[2026-01-13 12:54:10] 2026-01-13 17:53:43,156 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 12:54:10] 2026-01-13 17:53:43,167 | INFO     | [payload] control thread has finished
[2026-01-13 12:54:10] 2026-01-13 17:53:43,218 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 12:54:10] 2026-01-13 17:53:43,270 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 12:54:10] 2026-01-13 17:53:43,275 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 12:54:10] 2026-01-13 17:53:43,326 | INFO     | [job] control thread has finished
[2026-01-13 12:54:10] 2026-01-13 17:53:46,305 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 12:54:10] 2026-01-13 17:53:47,365 | INFO     | [monitor] cgroup control has ended
[2026-01-13 12:54:10] 2026-01-13 17:53:48,997 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140005115021120)>', '<ExcThread(monitor, started 140004324013824)>']
[2026-01-13 12:54:10] 2026-01-13 17:53:54,024 | INFO     | all workflow threads have been joined
[2026-01-13 12:54:10] 2026-01-13 17:53:54,024 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 12:54:10] 2026-01-13 17:53:54,024 | INFO     | traces error code: 0
[2026-01-13 12:54:10] 2026-01-13 17:53:54,024 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 12:54:10] 2026-01-13 17:54:08,912 | INFO     | PID=3219098 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 12:54:10] 2026-01-13 17:54:08,912 | INFO     | .. there are 40 such processes running
[2026-01-13 12:54:10] 2026-01-13 17:54:08,914 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 12:54:10] 2026-01-13 17:54:08,914 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 12:54:10] 2026-01-13 17:54:08,914 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 12:54:10] 2026-01-13 17:54:08,914 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 12:54:10] 2026-01-13 17:54:08,914 | INFO     | [monitor] control thread has ended
[2026-01-13 12:54:10] 2026-01-13 17:54:10,088 [wrapper] ==== pilot stdout END ====
[2026-01-13 12:54:10] 2026-01-13 17:54:10,125 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 12:54:10] 2026-01-13 17:54:10,167 [wrapper] pilotpid: 3219098
[2026-01-13 12:54:10] 2026-01-13 17:54:10,205 [wrapper] Pilot exit status: 0
[2026-01-13 12:54:10] 2026-01-13 17:54:10,370 [wrapper] pandaids: 6968277348
[2026-01-13 12:54:10] 2026-01-13 17:54:10,550 [wrapper] cleanup supervisor_pilot 4066605 3219099
[2026-01-13 12:54:10] 2026-01-13 17:54:10,554 [wrapper] Test setup, not cleaning
[2026-01-13 12:54:10] 2026-01-13 17:54:10,564 [wrapper] apfmon messages muted
[2026-01-13 12:54:10] 2026-01-13 17:54:10,575 [wrapper] ==== wrapper stdout END ====
[2026-01-13 12:54:10] 2026-01-13 17:54:10,578 [wrapper] ==== wrapper stderr END ====
[2026-01-13 12:54:10]  *** Error codes and diagnostics ***
[2026-01-13 12:54:10]     "exeErrorCode": 0,
[2026-01-13 12:54:10]     "exeErrorDiag": "",
[2026-01-13 12:54:10]     "pilotErrorCode": 0,
[2026-01-13 12:54:10]     "pilotErrorDiag": "",
[2026-01-13 12:54:10]  *** Listing of results directory ***
[2026-01-13 12:54:10] total 613748
[2026-01-13 12:54:10] -rw-r--r--. 1 boincer umatlas    579449 Jan 12 23:28 pilot3.tar.gz
[2026-01-13 12:54:10] -rwx------. 1 boincer umatlas     36322 Jan 13 00:03 runpilot2-wrapper.sh
[2026-01-13 12:54:10] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 00:03 queuedata.json
[2026-01-13 12:54:10] -rw-r--r--. 1 boincer umatlas       100 Jan 13 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 12:54:10] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 00:04 run_atlas
[2026-01-13 12:54:10] -rw-r--r--. 1 boincer umatlas       105 Jan 13 00:04 job.xml
[2026-01-13 12:54:10] -rw-r--r--. 2 boincer umatlas 321938209 Jan 13 00:04 EVNT.48188654._000001.pool.root.1
[2026-01-13 12:54:10] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 00:04 start_atlas.sh
[2026-01-13 12:54:10] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 00:04 shared
[2026-01-13 12:54:10] -rw-r--r--. 2 boincer umatlas    592399 Jan 13 00:04 input.tar.gz
[2026-01-13 12:54:10] -rw-r--r--. 1 boincer umatlas         0 Jan 13 00:04 boinc_lockfile
[2026-01-13 12:54:10] -rw-r--r--. 1 boincer umatlas      2623 Jan 13 00:04 pandaJob.out
[2026-01-13 12:54:10] -rw-------. 1 boincer umatlas        57 Jan 13 00:04 setup.sh.local
[2026-01-13 12:54:10] -rw-------. 1 boincer umatlas    987755 Jan 13 00:05 agis_schedconf.cvmfs.json
[2026-01-13 12:54:10] drwx------. 5 boincer umatlas      4096 Jan 13 00:05 pilot3
[2026-01-13 12:54:10] -rw-r--r--. 1 boincer umatlas      6902 Jan 13 12:48 init_data.xml
[2026-01-13 12:54:10] -rw-------. 1 boincer umatlas 289318556 Jan 13 12:50 HITS.48188657._000006.pool.root.1
[2026-01-13 12:54:10] -rw-r--r--. 1 boincer umatlas       531 Jan 13 12:50 boinc_task_state.xml
[2026-01-13 12:54:10] -rw-------. 1 boincer umatlas      1035 Jan 13 12:53 memory_monitor_summary.json
[2026-01-13 12:54:10] -rw-------. 1 boincer umatlas   1516246 Jan 13 12:53 agis_ddmendpoints.agis.ALL.json
[2026-01-13 12:54:10] -rw-------. 1 boincer umatlas    955678 Jan 13 12:53 log.48188657._000006.job.log.tgz.1
[2026-01-13 12:54:10] -rw-------. 1 boincer umatlas      7768 Jan 13 12:53 heartbeat.json
[2026-01-13 12:54:10] -rw-------. 1 boincer umatlas        95 Jan 13 12:54 pilot_heartbeat.json
[2026-01-13 12:54:10] -rw-------. 1 boincer umatlas       823 Jan 13 12:54 pilotlog.txt
[2026-01-13 12:54:10] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 12:54 boinc_mmap_file
[2026-01-13 12:54:10] -rw-r--r--. 1 boincer umatlas        28 Jan 13 12:54 wrapper_checkpoint.txt
[2026-01-13 12:54:10] -rw-------. 1 boincer umatlas   5700222 Jan 13 12:54 log.48188657._000006.job.log.1
[2026-01-13 12:54:10] -rw-------. 1 boincer umatlas       357 Jan 13 12:54 output.list
[2026-01-13 12:54:10] -rw-r--r--. 1 boincer umatlas       620 Jan 13 12:54 runtime_log
[2026-01-13 12:54:10] -rw-------. 1 boincer umatlas   6676480 Jan 13 12:54 result.tar.gz
[2026-01-13 12:54:10] -rw-r--r--. 1 boincer umatlas      9345 Jan 13 12:54 runtime_log.err
[2026-01-13 12:54:10] -rw-------. 1 boincer umatlas       658 Jan 13 12:54 q1dNDmXklz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMwnKDmaaNyUm.diag
[2026-01-13 12:54:10] -rw-r--r--. 1 boincer umatlas     16412 Jan 13 12:54 stderr.txt
[2026-01-13 12:54:10] HITS file was successfully produced:
[2026-01-13 12:54:10] -rw-------. 1 boincer umatlas 289318556 Jan 13 12:50 shared/HITS.pool.root.1
[2026-01-13 12:54:10]  *** Contents of shared directory: ***
[2026-01-13 12:54:10] total 604056
[2026-01-13 12:54:10] -rw-r--r--. 2 boincer umatlas 321938209 Jan 13 00:04 ATLAS.root_0
[2026-01-13 12:54:10] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 00:04 start_atlas.sh
[2026-01-13 12:54:10] -rw-r--r--. 2 boincer umatlas    592399 Jan 13 00:04 input.tar.gz
[2026-01-13 12:54:10] -rw-------. 1 boincer umatlas 289318556 Jan 13 12:50 HITS.pool.root.1
[2026-01-13 12:54:10] -rw-------. 1 boincer umatlas   6676480 Jan 13 12:54 result.tar.gz
12:54:11 (3211807): run_atlas exited; CPU time 49452.135152
12:54:11 (3211807): called boinc_finish(0)

</stderr_txt>
]]>

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