Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:04:08 (1833853): wrapper (7.7.26015): starting
20:04:08 (1833853): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 20:04:08] Arguments: --nthreads 8
[2026-01-12 20:04:08] Threads: 8
[2026-01-12 20:04:08] Checking for CVMFS
[2026-01-12 20:04:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 20:04:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 20:04:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 20:04:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 20:04:10] 2.13.3.0 10223 98464 256164 155071 2 660 39729598 40960000 37928 16776704 0 1029487948 99.688 853175856 51101 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 20:04:10] CVMFS is ok
[2026-01-12 20:04:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 20:04:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 20:04:10] Further information can be found at the LHC@home message board.
[2026-01-12 20:04:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 20:04:10] Checking for apptainer binary...
[2026-01-12 20:04:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 20:04:10] Running /usr/bin/apptainer --version
[2026-01-12 20:04:10] apptainer version 1.4.5-2.el9
[2026-01-12 20:04:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 20:04:11] c8-7-6.aglt2.org
[2026-01-12 20:04:11] apptainer works
[2026-01-12 20:04:11] Set ATHENA_PROC_NUMBER=8
[2026-01-12 20:04:11] Set ATHENA_CORE_NUMBER=8
[2026-01-12 20:04:11] Starting ATLAS job with PandaID=6968009782
[2026-01-12 20:04:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 22:44:48]  *** The last 200 lines of the pilot log: ***
[2026-01-12 22:44:48] 2026-01-13 03:43:40,340 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-12 22:44:48] 2026-01-13 03:43:40,345 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.8121015624997
[2026-01-12 22:44:48] 2026-01-13 03:43:40,358 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6968009782/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 22:44:48] 2026-01-13 03:43:40,359 | INFO     | extracted standard info from prmon json
[2026-01-12 22:44:48] 2026-01-13 03:43:40,359 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 22:44:48] 2026-01-13 03:43:40,359 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 22:44:48] 2026-01-13 03:43:40,359 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 22:44:48] 2026-01-13 03:43:40,359 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 22:44:48] 2026-01-13 03:43:40,361 | INFO     | fitting pss+swap vs Time
[2026-01-12 22:44:48] 2026-01-13 03:43:40,361 | INFO     | sum of square deviations: 1132447406.337665
[2026-01-12 22:44:48] 2026-01-13 03:43:40,362 | INFO     | sum of deviations: 67155549392.974
[2026-01-12 22:44:48] 2026-01-13 03:43:40,362 | INFO     | mean x: 1768271137.5324676
[2026-01-12 22:44:48] 2026-01-13 03:43:40,362 | INFO     | mean y: 2487879.8051948054
[2026-01-12 22:44:48] 2026-01-13 03:43:40,362 | INFO     | intersect: -104858205033.7553
[2026-01-12 22:44:48] 2026-01-13 03:43:40,362 | INFO     | chi2: 6.3376074361772865
[2026-01-12 22:44:48] 2026-01-13 03:43:40,362 | INFO     | sum of square deviations: 1025684138.8322127
[2026-01-12 22:44:48] 2026-01-13 03:43:40,363 | INFO     | sum of deviations: 74229300978.42278
[2026-01-12 22:44:48] 2026-01-13 03:43:40,363 | INFO     | mean x: 1768270985.033557
[2026-01-12 22:44:48] 2026-01-13 03:43:40,363 | INFO     | mean y: 2497606.3154362417
[2026-01-12 22:44:48] 2026-01-13 03:43:40,363 | INFO     | intersect: -127968204279.46255
[2026-01-12 22:44:48] 2026-01-13 03:43:40,363 | INFO     | chi2: 5.715222073874401
[2026-01-12 22:44:48] 2026-01-13 03:43:40,363 | INFO     | current chi2=5.715222073874401 (change=9.82050984650914 %)
[2026-01-12 22:44:48] 2026-01-13 03:43:40,363 | INFO     | right removable region: 148
[2026-01-12 22:44:48] 2026-01-13 03:43:40,363 | INFO     | sum of square deviations: 1025690237.8926187
[2026-01-12 22:44:48] 2026-01-13 03:43:40,364 | INFO     | sum of deviations: 13588857040.50337
[2026-01-12 22:44:48] 2026-01-13 03:43:40,364 | INFO     | mean x: 1768271290.0268457
[2026-01-12 22:44:48] 2026-01-13 03:43:40,364 | INFO     | mean y: 2564312.624161074
[2026-01-12 22:44:48] 2026-01-13 03:43:40,364 | INFO     | intersect: -23424377741.899803
[2026-01-12 22:44:48] 2026-01-13 03:43:40,364 | INFO     | chi2: 1.611065501331398
[2026-01-12 22:44:48] 2026-01-13 03:43:40,364 | INFO     | current chi2=1.611065501331398 (change=74.5792790488273 %)
[2026-01-12 22:44:48] 2026-01-13 03:43:40,364 | INFO     | sum of square deviations: 925854587.8888888
[2026-01-12 22:44:48] 2026-01-13 03:43:40,364 | INFO     | sum of deviations: -6911375740.305555
[2026-01-12 22:44:48] 2026-01-13 03:43:40,364 | INFO     | mean x: 1768271442.5277777
[2026-01-12 22:44:48] 2026-01-13 03:43:40,365 | INFO     | mean y: 2595321.201388889
[2026-01-12 22:44:48] 2026-01-13 03:43:40,365 | INFO     | intersect: 13202495726.758648
[2026-01-12 22:44:48] 2026-01-13 03:43:40,365 | INFO     | chi2: 0.7963128588562357
[2026-01-12 22:44:48] 2026-01-13 03:43:40,365 | INFO     | current chi2=0.7963128588562357 (change=50.57228534791688 %)
[2026-01-12 22:44:48] 2026-01-13 03:43:40,365 | INFO     | sum of square deviations: 832716737.884891
[2026-01-12 22:44:48] 2026-01-13 03:43:40,365 | INFO     | sum of deviations: -12685252659.079136
[2026-01-12 22:44:48] 2026-01-13 03:43:40,365 | INFO     | mean x: 1768271595.028777
[2026-01-12 22:44:48] 2026-01-13 03:43:40,365 | INFO     | mean y: 2604676.7697841725
[2026-01-12 22:44:48] 2026-01-13 03:43:40,365 | INFO     | intersect: 26939702170.19569
[2026-01-12 22:44:48] 2026-01-13 03:43:40,366 | INFO     | chi2: 0.7139520161108962
[2026-01-12 22:44:48] 2026-01-13 03:43:40,366 | INFO     | current chi2=0.7139520161108962 (change=10.342774429592467 %)
[2026-01-12 22:44:48] 2026-01-13 03:43:40,366 | INFO     | left removable region: 30
[2026-01-12 22:44:48] 2026-01-13 03:43:40,366 | INFO     | sum of square deviations: 509432201.3644068
[2026-01-12 22:44:48] 2026-01-13 03:43:40,366 | INFO     | sum of deviations: -3731632452.8050847
[2026-01-12 22:44:48] 2026-01-13 03:43:40,366 | INFO     | mean x: 1768271869.5338984
[2026-01-12 22:44:48] 2026-01-13 03:43:40,366 | INFO     | mean y: 2619414.0762711866
[2026-01-12 22:44:48] 2026-01-13 03:43:40,366 | INFO     | intersect: 12955355177.662107
[2026-01-12 22:44:48] 2026-01-13 03:43:40,366 | INFO     | chi2: 0.012716273107791028
[2026-01-12 22:44:48] 2026-01-13 03:43:40,366 | INFO     | current memory leak: -7.33 B/s (using 118 data points, chi2=0.01)
[2026-01-12 22:44:48] 2026-01-13 03:43:40,367 | INFO     | could have reported an average CPU frequency of 3799 MHz (9 samples)
[2026-01-12 22:44:48] 2026-01-13 03:43:40,367 | INFO     | ..............................
[2026-01-12 22:44:48] 2026-01-13 03:43:40,367 | INFO     | . Timing measurements:
[2026-01-12 22:44:48] 2026-01-13 03:43:40,367 | INFO     | . get job = 0 s
[2026-01-12 22:44:48] 2026-01-13 03:43:40,367 | INFO     | . initial setup = 3 s
[2026-01-12 22:44:48] 2026-01-13 03:43:40,367 | INFO     | . payload setup = 46 s
[2026-01-12 22:44:48] 2026-01-13 03:43:40,367 | INFO     | . stage-in = 0 s
[2026-01-12 22:44:48] 2026-01-13 03:43:40,367 | INFO     | . payload execution = 9370 s
[2026-01-12 22:44:48] 2026-01-13 03:43:40,367 | INFO     | . stage-out = 0 s
[2026-01-12 22:44:48] 2026-01-13 03:43:40,367 | INFO     | . log creation = 0 s
[2026-01-12 22:44:48] 2026-01-13 03:43:40,367 | INFO     | ..............................
[2026-01-12 22:44:48] 2026-01-13 03:43:40,423 | INFO     | 
[2026-01-12 22:44:48] 2026-01-13 03:43:40,423 | INFO     | job summary report
[2026-01-12 22:44:48] 2026-01-13 03:43:40,423 | INFO     | --------------------------------------------------
[2026-01-12 22:44:48] 2026-01-13 03:43:40,423 | INFO     | PanDA job id: 6968009782
[2026-01-12 22:44:48] 2026-01-13 03:43:40,423 | INFO     | task id: 48188673
[2026-01-12 22:44:48] 2026-01-13 03:43:40,423 | INFO     | errors: (none)
[2026-01-12 22:44:48] 2026-01-13 03:43:40,423 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 22:44:48] 2026-01-13 03:43:40,423 | INFO     | pilot state: finished 
[2026-01-12 22:44:48] 2026-01-13 03:43:40,423 | INFO     | transexitcode: 0
[2026-01-12 22:44:48] 2026-01-13 03:43:40,423 | INFO     | exeerrorcode: 0
[2026-01-12 22:44:48] 2026-01-13 03:43:40,423 | INFO     | exeerrordiag: 
[2026-01-12 22:44:48] 2026-01-13 03:43:40,423 | INFO     | exitcode: 0
[2026-01-12 22:44:48] 2026-01-13 03:43:40,423 | INFO     | exitmsg: OK
[2026-01-12 22:44:48] 2026-01-13 03:43:40,423 | INFO     | cpuconsumptiontime: 32542 s
[2026-01-12 22:44:48] 2026-01-13 03:43:40,423 | INFO     | nevents: 400
[2026-01-12 22:44:48] 2026-01-13 03:43:40,423 | INFO     | neventsw: 0
[2026-01-12 22:44:48] 2026-01-13 03:43:40,423 | INFO     | pid: 1872994
[2026-01-12 22:44:48] 2026-01-13 03:43:40,423 | INFO     | pgrp: 1872994
[2026-01-12 22:44:48] 2026-01-13 03:43:40,423 | INFO     | corecount: 8
[2026-01-12 22:44:48] 2026-01-13 03:43:40,424 | INFO     | event service: False
[2026-01-12 22:44:48] 2026-01-13 03:43:40,424 | INFO     | sizes: {0: 2283901, 1: 2284156, 12: 2284156, 23: 2284184, 29: 2284474, 34: 2284502, 9421: 2313005, 9422: 2322059, 9429: 2322261}
[2026-01-12 22:44:48] 2026-01-13 03:43:40,424 | INFO     | --------------------------------------------------
[2026-01-12 22:44:48] 2026-01-13 03:43:40,424 | INFO     | 
[2026-01-12 22:44:48] 2026-01-13 03:43:40,424 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-12 22:44:48] 2026-01-13 03:43:40,444 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 22:44:48] 2026-01-13 03:43:40,445 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 22:44:48] 2026-01-13 03:43:40,445 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 22:44:48] 2026-01-13 03:43:40,445 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 22:44:48] 2026-01-13 03:43:40,445 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 22:44:48] 2026-01-13 03:43:40,445 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 22:44:48] 2026-01-13 03:43:40,445 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 22:44:48] 2026-01-13 03:43:40,445 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 22:44:48] 2026-01-13 03:43:40,445 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 22:44:48] 2026-01-13 03:43:40,445 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 22:44:48] 2026-01-13 03:43:40,445 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 22:44:48] 2026-01-13 03:43:40,445 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 22:44:48] 2026-01-13 03:43:40,445 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 22:44:48] 2026-01-13 03:43:40,445 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 22:44:48] 2026-01-13 03:43:40,445 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 22:44:48] 2026-01-13 03:43:40,445 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 22:44:48] 2026-01-13 03:43:40,445 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 22:44:48] 2026-01-13 03:43:40,445 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 22:44:48] 2026-01-13 03:43:40,445 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 22:44:48] 2026-01-13 03:43:40,445 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 22:44:48] 2026-01-13 03:43:40,446 | INFO     | job 6968009782 has completed (purged errors)
[2026-01-12 22:44:48] 2026-01-13 03:43:40,446 | INFO     | overall cleanup function is called
[2026-01-12 22:44:48] 2026-01-13 03:43:41,455 | INFO     | --- collectZombieJob: --- 10, [1872994]
[2026-01-12 22:44:48] 2026-01-13 03:43:41,456 | INFO     | zombie collector waiting for pid 1872994
[2026-01-12 22:44:48] 2026-01-13 03:43:41,457 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 22:44:48] 2026-01-13 03:43:41,457 | INFO     | collected zombie processes
[2026-01-12 22:44:48] 2026-01-13 03:43:41,457 | INFO     | will attempt to kill all subprocesses of pid=1872994
[2026-01-12 22:44:48] 2026-01-13 03:43:41,464 | INFO     | PID=1861577 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-12 22:44:48] 2026-01-13 03:43:41,465 | INFO     | .. there are 42 such processes running
[2026-01-12 22:44:48] 2026-01-13 03:43:41,915 | INFO     | process IDs to be killed: [1872994] (in reverse order)
[2026-01-12 22:44:48] 2026-01-13 03:43:42,087 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 22:44:48] 2026-01-13 03:43:42,087 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 22:44:48] 2026-01-13 03:43:42,111 | INFO     | did not find any defunct processes belonging to 1872994
[2026-01-12 22:44:48] 2026-01-13 03:43:42,134 | INFO     | did not find any defunct processes belonging to 1872994
[2026-01-12 22:44:48] 2026-01-13 03:43:42,135 | INFO     | ready for new job
[2026-01-12 22:44:48] 2026-01-13 03:43:42,135 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 22:44:48] 2026-01-13 03:43:42,136 | INFO     | ***************************************
[2026-01-12 22:44:48] 2026-01-13 03:43:42,136 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 22:44:48] 2026-01-13 03:43:42,136 | INFO     | ***************************************
[2026-01-12 22:44:48] 2026-01-13 03:43:42,136 | INFO     | 
[2026-01-12 22:44:48] 2026-01-13 03:43:42,141 | INFO     | architecture information:
[2026-01-12 22:44:48] 2026-01-13 03:43:42,141 | INFO     | executing command: cat /etc/os-release
[2026-01-12 22:44:48] 2026-01-13 03:43:42,156 | INFO     | cat /etc/os-release:
[2026-01-12 22:44:48] NAME="CentOS Linux"
[2026-01-12 22:44:48] VERSION="7 (Core)"
[2026-01-12 22:44:48] ID="centos"
[2026-01-12 22:44:48] ID_LIKE="rhel fedora"
[2026-01-12 22:44:48] VERSION_ID="7"
[2026-01-12 22:44:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 22:44:48] ANSI_COLOR="0;31"
[2026-01-12 22:44:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 22:44:48] HOME_URL="https://www.centos.org/"
[2026-01-12 22:44:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 22:44:48] 
[2026-01-12 22:44:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 22:44:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 22:44:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 22:44:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 22:44:48] 
[2026-01-12 22:44:48] 2026-01-13 03:43:42,157 | INFO     | ***************************************
[2026-01-12 22:44:48] 2026-01-13 03:43:42,657 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-12 22:44:48] 2026-01-13 03:43:42,675 | INFO     | sufficient remaining disk space (173333807104 B)
[2026-01-12 22:44:48] 2026-01-13 03:43:42,675 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 22:44:48] 2026-01-13 03:43:42,675 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 22:44:48] 2026-01-13 03:43:42,675 | INFO     | update_server=False
[2026-01-12 22:44:48] 2026-01-13 03:43:42,675 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 22:44:48] 2026-01-13 03:43:42,675 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 22:44:48] 2026-01-13 03:43:43,140 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 22:44:48] 2026-01-13 03:43:43,140 | INFO     | aborting loop
[2026-01-12 22:44:48] 2026-01-13 03:43:43,250 | INFO     | all payload control threads have been joined
[2026-01-12 22:44:48] 2026-01-13 03:43:43,499 | INFO     | all data control threads have been joined
[2026-01-12 22:44:48] 2026-01-13 03:43:43,676 | INFO     | [job] retrieve thread has finished
[2026-01-12 22:44:48] 2026-01-13 03:43:43,780 | INFO     | [payload] failed_post thread has finished
[2026-01-12 22:44:48] 2026-01-13 03:43:43,852 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 22:44:48] 2026-01-13 03:43:44,007 | INFO     | all job control threads have been joined
[2026-01-12 22:44:48] 2026-01-13 03:43:44,146 | INFO     | [job] job monitor thread has finished
[2026-01-12 22:44:48] 2026-01-13 03:43:44,202 | INFO     | [data] copytool_in thread has finished
[2026-01-12 22:44:48] 2026-01-13 03:43:44,255 | INFO     | [payload] control thread has finished
[2026-01-12 22:44:48] 2026-01-13 03:43:44,434 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 22:44:48] 2026-01-13 03:43:44,475 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 22:44:48] 2026-01-13 03:43:44,504 | INFO     | [data] control thread has finished
[2026-01-12 22:44:48] 2026-01-13 03:43:44,681 | INFO     | [data] copytool_out thread has finished
[2026-01-12 22:44:48] 2026-01-13 03:43:44,963 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 22:44:48] 2026-01-13 03:43:45,012 | INFO     | [job] control thread has finished
[2026-01-12 22:44:48] 2026-01-13 03:43:45,108 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 22:44:48] 2026-01-13 03:43:45,175 | INFO     | [job] validate thread has finished
[2026-01-12 22:44:48] 2026-01-13 03:43:45,218 | INFO     | [payload] validate_post thread has finished
[2026-01-12 22:44:48] 2026-01-13 03:43:45,436 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 22:44:48] 2026-01-13 03:43:46,442 | INFO     | [job] queue monitor thread has finished
[2026-01-12 22:44:48] 2026-01-13 03:43:48,482 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 22:44:48] 2026-01-13 03:44:14,109 | INFO     | PID=1861577 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 22:44:48] 2026-01-13 03:44:14,111 | INFO     | .. there are 41 such processes running
[2026-01-12 22:44:48] 2026-01-13 03:44:14,111 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 22:44:48] 2026-01-13 03:44:14,111 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 22:44:48] 2026-01-13 03:44:14,111 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 22:44:48] 2026-01-13 03:44:41,702 | INFO     | [monitor] cgroup control has ended
[2026-01-12 22:44:48] 2026-01-13 03:44:42,937 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139978765129536)>', '<ExcThread(monitor, started 139978243811072)>']
[2026-01-12 22:44:48] 2026-01-13 03:44:43,270 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 22:44:48] 2026-01-13 03:44:43,270 | INFO     | [monitor] control thread has ended
[2026-01-12 22:44:48] 2026-01-13 03:44:47,962 | INFO     | all workflow threads have been joined
[2026-01-12 22:44:48] 2026-01-13 03:44:47,962 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 22:44:48] 2026-01-13 03:44:47,962 | INFO     | traces error code: 0
[2026-01-12 22:44:48] 2026-01-13 03:44:47,962 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 22:44:48] 2026-01-13 03:44:48,134 [wrapper] ==== pilot stdout END ====
[2026-01-12 22:44:48] 2026-01-13 03:44:48,137 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 22:44:48] 2026-01-13 03:44:48,140 [wrapper] pilotpid: 1861577
[2026-01-12 22:44:48] 2026-01-13 03:44:48,143 [wrapper] Pilot exit status: 0
[2026-01-12 22:44:48] 2026-01-13 03:44:48,152 [wrapper] pandaids: 6968009782
[2026-01-12 22:44:48] 2026-01-13 03:44:48,276 [wrapper] cleanup supervisor_pilot 2934136 1861578
[2026-01-12 22:44:48] 2026-01-13 03:44:48,279 [wrapper] Test setup, not cleaning
[2026-01-12 22:44:48] 2026-01-13 03:44:48,282 [wrapper] apfmon messages muted
[2026-01-12 22:44:48] 2026-01-13 03:44:48,285 [wrapper] ==== wrapper stdout END ====
[2026-01-12 22:44:48] 2026-01-13 03:44:48,287 [wrapper] ==== wrapper stderr END ====
[2026-01-12 22:44:48]  *** Error codes and diagnostics ***
[2026-01-12 22:44:48]     "exeErrorCode": 0,
[2026-01-12 22:44:48]     "exeErrorDiag": "",
[2026-01-12 22:44:48]     "pilotErrorCode": 0,
[2026-01-12 22:44:48]     "pilotErrorDiag": "",
[2026-01-12 22:44:48]  *** Listing of results directory ***
[2026-01-12 22:44:48] total 636396
[2026-01-12 22:44:48] -rw-r--r--. 1 boincer umatlas    579449 Jan 12 19:14 pilot3.tar.gz
[2026-01-12 22:44:48] -rw-r--r--. 1 boincer umatlas      5112 Jan 12 19:21 queuedata.json
[2026-01-12 22:44:48] -rwx------. 1 boincer umatlas     36322 Jan 12 19:22 runpilot2-wrapper.sh
[2026-01-12 22:44:48] -rw-r--r--. 1 boincer umatlas       100 Jan 12 20:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 22:44:48] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 12 20:04 run_atlas
[2026-01-12 22:44:48] -rw-r--r--. 1 boincer umatlas       105 Jan 12 20:04 job.xml
[2026-01-12 22:44:48] -rw-r--r--. 2 boincer umatlas 350784220 Jan 12 20:04 EVNT.48188671._000006.pool.root.1
[2026-01-12 22:44:48] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 20:04 start_atlas.sh
[2026-01-12 22:44:48] drwxrwx--x. 2 boincer umatlas      4096 Jan 12 20:04 shared
[2026-01-12 22:44:48] -rw-r--r--. 2 boincer umatlas    592416 Jan 12 20:04 input.tar.gz
[2026-01-12 22:44:48] -rw-r--r--. 1 boincer umatlas         0 Jan 12 20:04 boinc_lockfile
[2026-01-12 22:44:48] -rw-r--r--. 1 boincer umatlas      2632 Jan 12 20:04 pandaJob.out
[2026-01-12 22:44:48] -rw-------. 1 boincer umatlas        57 Jan 12 20:04 setup.sh.local
[2026-01-12 22:44:48] -rw-------. 1 boincer umatlas    987763 Jan 12 20:05 agis_schedconf.cvmfs.json
[2026-01-12 22:44:48] -rw-------. 1 boincer umatlas   1516240 Jan 12 20:05 agis_ddmendpoints.agis.ALL.json
[2026-01-12 22:44:48] drwx------. 5 boincer umatlas      4096 Jan 12 20:05 pilot3
[2026-01-12 22:44:48] -rw-r--r--. 1 boincer umatlas      7171 Jan 12 22:39 init_data.xml
[2026-01-12 22:44:48] -rw-------. 1 boincer umatlas 293464220 Jan 12 22:43 HITS.48188673._000148.pool.root.1
[2026-01-12 22:44:48] -rw-r--r--. 1 boincer umatlas       529 Jan 12 22:43 boinc_task_state.xml
[2026-01-12 22:44:48] -rw-------. 1 boincer umatlas        95 Jan 12 22:43 pilot_heartbeat.json
[2026-01-12 22:44:48] -rw-------. 1 boincer umatlas      1035 Jan 12 22:43 memory_monitor_summary.json
[2026-01-12 22:44:48] -rw-------. 1 boincer umatlas    509309 Jan 12 22:43 log.48188673._000148.job.log.tgz.1
[2026-01-12 22:44:48] -rw-------. 1 boincer umatlas      7764 Jan 12 22:43 heartbeat.json
[2026-01-12 22:44:48] -rw-r--r--. 1 boincer umatlas        27 Jan 12 22:44 wrapper_checkpoint.txt
[2026-01-12 22:44:48] -rw-r--r--. 1 boincer umatlas      8192 Jan 12 22:44 boinc_mmap_file
[2026-01-12 22:44:48] -rw-------. 1 boincer umatlas      4825 Jan 12 22:44 pilotlog.txt
[2026-01-12 22:44:48] -rw-------. 1 boincer umatlas   1240526 Jan 12 22:44 log.48188673._000148.job.log.1
[2026-01-12 22:44:48] -rw-------. 1 boincer umatlas       357 Jan 12 22:44 output.list
[2026-01-12 22:44:48] -rw-r--r--. 1 boincer umatlas       620 Jan 12 22:44 runtime_log
[2026-01-12 22:44:48] -rw-------. 1 boincer umatlas   1771520 Jan 12 22:44 result.tar.gz
[2026-01-12 22:44:48] -rw-r--r--. 1 boincer umatlas      9332 Jan 12 22:44 runtime_log.err
[2026-01-12 22:44:48] -rw-------. 1 boincer umatlas       650 Jan 12 22:44 5H4NDmXMhz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmO3hKDmfIebUo.diag
[2026-01-12 22:44:48] -rw-r--r--. 1 boincer umatlas     21268 Jan 12 22:44 stderr.txt
[2026-01-12 22:44:48] HITS file was successfully produced:
[2026-01-12 22:44:48] -rw-------. 1 boincer umatlas 293464220 Jan 12 22:43 shared/HITS.pool.root.1
[2026-01-12 22:44:48]  *** Contents of shared directory: ***
[2026-01-12 22:44:48] total 631488
[2026-01-12 22:44:48] -rw-r--r--. 2 boincer umatlas 350784220 Jan 12 20:04 ATLAS.root_0
[2026-01-12 22:44:48] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 20:04 start_atlas.sh
[2026-01-12 22:44:48] -rw-r--r--. 2 boincer umatlas    592416 Jan 12 20:04 input.tar.gz
[2026-01-12 22:44:48] -rw-------. 1 boincer umatlas 293464220 Jan 12 22:43 HITS.pool.root.1
[2026-01-12 22:44:48] -rw-------. 1 boincer umatlas   1771520 Jan 12 22:44 result.tar.gz
22:44:50 (1833853): run_atlas exited; CPU time 32841.995590
22:44:50 (1833853): called boinc_finish(0)

</stderr_txt>
]]>

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