Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:06:22 (2047049): wrapper (7.7.26015): starting
20:06:22 (2047049): wrapper: running run_atlas (--nthreads 11)
[2026-01-12 20:06:22] Arguments: --nthreads 11
[2026-01-12 20:06:22] Threads: 11
[2026-01-12 20:06:22] Checking for CVMFS
[2026-01-12 20:06:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 20:06:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 20:06:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 20:06:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 20:06:23] 2.13.3.0 12357 98441 260704 155071 2 782 23108804 32503809 37858 16776704 0 1354694022 99.597 1389663228 48196 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 20:06:23] CVMFS is ok
[2026-01-12 20:06:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 20:06:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 20:06:23] Further information can be found at the LHC@home message board.
[2026-01-12 20:06:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 20:06:23] Checking for apptainer binary...
[2026-01-12 20:06:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 20:06:23] Running /usr/bin/apptainer --version
[2026-01-12 20:06:23] apptainer version 1.4.5-2.el9
[2026-01-12 20:06:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 20:06:23] c8-7-2.aglt2.org
[2026-01-12 20:06:23] apptainer works
[2026-01-12 20:06:23] Set ATHENA_PROC_NUMBER=11
[2026-01-12 20:06:23] Set ATHENA_CORE_NUMBER=11
[2026-01-12 20:06:23] Starting ATLAS job with PandaID=6963076726
[2026-01-12 20:06:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 00:01:10]  *** The last 200 lines of the pilot log: ***
[2026-01-13 00:01:10] 2026-01-13 04:59:56,870 | INFO     | executing command: lscpu
[2026-01-13 00:01:10] 2026-01-13 04:59:56,923 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 00:01:10] 2026-01-13 04:59:57,165 | INFO     | time since job start (13997s) is within the limit (174528.0s)
[2026-01-13 00:01:10] 2026-01-13 04:59:58,185 | INFO     | monitor loop #951: job 0:6963076726 is in state 'finished'
[2026-01-13 00:01:10] 2026-01-13 04:59:58,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 00:01:10] 2026-01-13 04:59:59,171 | INFO     | time since job start (13999s) is within the limit (174528.0s)
[2026-01-13 00:01:10] 2026-01-13 05:00:00,689 | INFO     | monitor loop #952: job 0:6963076726 is in state 'finished'
[2026-01-13 00:01:10] 2026-01-13 05:00:00,689 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 00:01:10] 2026-01-13 05:00:01,184 | INFO     | time since job start (14001s) is within the limit (174528.0s)
[2026-01-13 00:01:10] 2026-01-13 05:00:01,765 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-13 00:01:10] 2026-01-13 05:00:01,776 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3795.868054687499
[2026-01-13 00:01:10] 2026-01-13 05:00:01,789 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963076726/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 00:01:10] 2026-01-13 05:00:01,790 | INFO     | extracted standard info from prmon json
[2026-01-13 00:01:10] 2026-01-13 05:00:01,790 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 00:01:10] 2026-01-13 05:00:01,790 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 00:01:10] 2026-01-13 05:00:01,790 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 00:01:10] 2026-01-13 05:00:01,790 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 00:01:10] 2026-01-13 05:00:01,793 | INFO     | fitting pss+swap vs Time
[2026-01-13 00:01:10] 2026-01-13 05:00:01,793 | INFO     | sum of square deviations: 3723716330.0
[2026-01-13 00:01:10] 2026-01-13 05:00:01,794 | INFO     | sum of deviations: 76783988144.0
[2026-01-13 00:01:10] 2026-01-13 05:00:01,794 | INFO     | mean x: 1768273387.0
[2026-01-13 00:01:10] 2026-01-13 05:00:01,794 | INFO     | mean y: 2592916.0480349343
[2026-01-13 00:01:10] 2026-01-13 05:00:01,794 | INFO     | intersect: -36459658971.640396
[2026-01-13 00:01:10] 2026-01-13 05:00:01,794 | INFO     | chi2: 1.4800822827970042
[2026-01-13 00:01:10] 2026-01-13 05:00:01,794 | INFO     | sum of square deviations: 3485088600.0
[2026-01-13 00:01:10] 2026-01-13 05:00:01,795 | INFO     | sum of deviations: 74032709597.0
[2026-01-13 00:01:10] 2026-01-13 05:00:01,795 | INFO     | mean x: 1768273234.5
[2026-01-13 00:01:10] 2026-01-13 05:00:01,795 | INFO     | mean y: 2591158.1875
[2026-01-13 00:01:10] 2026-01-13 05:00:01,795 | INFO     | intersect: -37560315810.056114
[2026-01-13 00:01:10] 2026-01-13 05:00:01,795 | INFO     | chi2: 1.4793736073666344
[2026-01-13 00:01:10] 2026-01-13 05:00:01,795 | INFO     | current chi2=1.4793736073666344 (change=0.04788081302010851 %)
[2026-01-13 00:01:10] 2026-01-13 05:00:01,795 | INFO     | right removable region: 223
[2026-01-13 00:01:10] 2026-01-13 05:00:01,796 | INFO     | sum of square deviations: 3485088600.0
[2026-01-13 00:01:10] 2026-01-13 05:00:01,796 | INFO     | sum of deviations: 42106745049.000015
[2026-01-13 00:01:10] 2026-01-13 05:00:01,797 | INFO     | mean x: 1768273539.5
[2026-01-13 00:01:10] 2026-01-13 05:00:01,797 | INFO     | mean y: 2614907.8928571427
[2026-01-13 00:01:10] 2026-01-13 05:00:01,797 | INFO     | intersect: -21361617583.82037
[2026-01-13 00:01:10] 2026-01-13 05:00:01,797 | INFO     | chi2: 0.2826855303153145
[2026-01-13 00:01:10] 2026-01-13 05:00:01,797 | INFO     | current chi2=0.2826855303153145 (change=80.90068818463891 %)
[2026-01-13 00:01:10] 2026-01-13 05:00:01,797 | INFO     | sum of square deviations: 3256879670.0
[2026-01-13 00:01:10] 2026-01-13 05:00:01,798 | INFO     | sum of deviations: 31584986016.0
[2026-01-13 00:01:10] 2026-01-13 05:00:01,798 | INFO     | mean x: 1768273692.0
[2026-01-13 00:01:10] 2026-01-13 05:00:01,798 | INFO     | mean y: 2621934.1689497717
[2026-01-13 00:01:10] 2026-01-13 05:00:01,798 | INFO     | intersect: -17145969814.165642
[2026-01-13 00:01:10] 2026-01-13 05:00:01,798 | INFO     | chi2: 0.23532957484259606
[2026-01-13 00:01:10] 2026-01-13 05:00:01,798 | INFO     | current chi2=0.23532957484259606 (change=16.752168184871874 %)
[2026-01-13 00:01:10] 2026-01-13 05:00:01,798 | INFO     | left removable region: 20
[2026-01-13 00:01:10] 2026-01-13 05:00:01,798 | INFO     | sum of square deviations: 2593916542.0
[2026-01-13 00:01:10] 2026-01-13 05:00:01,799 | INFO     | sum of deviations: 5338934171.0
[2026-01-13 00:01:10] 2026-01-13 05:00:01,799 | INFO     | mean x: 1768273814.0
[2026-01-13 00:01:10] 2026-01-13 05:00:01,799 | INFO     | mean y: 2638775.280788177
[2026-01-13 00:01:10] 2026-01-13 05:00:01,799 | INFO     | intersect: -3636914516.5803266
[2026-01-13 00:01:10] 2026-01-13 05:00:01,799 | INFO     | chi2: 0.0021152449608439435
[2026-01-13 00:01:10] 2026-01-13 05:00:01,799 | INFO     | current memory leak: 2.06 B/s (using 203 data points, chi2=0.00)
[2026-01-13 00:01:10] 2026-01-13 05:00:01,800 | INFO     | could have reported an average CPU frequency of 3797 MHz (11 samples)
[2026-01-13 00:01:10] 2026-01-13 05:00:01,800 | INFO     | ..............................
[2026-01-13 00:01:10] 2026-01-13 05:00:01,800 | INFO     | . Timing measurements:
[2026-01-13 00:01:10] 2026-01-13 05:00:01,800 | INFO     | . get job = 0 s
[2026-01-13 00:01:10] 2026-01-13 05:00:01,800 | INFO     | . initial setup = 2 s
[2026-01-13 00:01:10] 2026-01-13 05:00:01,800 | INFO     | . payload setup = 8 s
[2026-01-13 00:01:10] 2026-01-13 05:00:01,800 | INFO     | . stage-in = 0 s
[2026-01-13 00:01:10] 2026-01-13 05:00:01,800 | INFO     | . payload execution = 13961 s
[2026-01-13 00:01:10] 2026-01-13 05:00:01,800 | INFO     | . stage-out = 1 s
[2026-01-13 00:01:10] 2026-01-13 05:00:01,800 | INFO     | . log creation = 0 s
[2026-01-13 00:01:10] 2026-01-13 05:00:01,800 | INFO     | ..............................
[2026-01-13 00:01:10] 2026-01-13 05:00:01,859 | INFO     | 
[2026-01-13 00:01:10] 2026-01-13 05:00:01,860 | INFO     | job summary report
[2026-01-13 00:01:10] 2026-01-13 05:00:01,860 | INFO     | --------------------------------------------------
[2026-01-13 00:01:10] 2026-01-13 05:00:01,860 | INFO     | PanDA job id: 6963076726
[2026-01-13 00:01:10] 2026-01-13 05:00:01,860 | INFO     | task id: 47898826
[2026-01-13 00:01:10] 2026-01-13 05:00:01,860 | INFO     | errors: (none)
[2026-01-13 00:01:10] 2026-01-13 05:00:01,860 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 00:01:10] 2026-01-13 05:00:01,860 | INFO     | pilot state: finished 
[2026-01-13 00:01:10] 2026-01-13 05:00:01,860 | INFO     | transexitcode: 0
[2026-01-13 00:01:10] 2026-01-13 05:00:01,860 | INFO     | exeerrorcode: 0
[2026-01-13 00:01:10] 2026-01-13 05:00:01,860 | INFO     | exeerrordiag: 
[2026-01-13 00:01:10] 2026-01-13 05:00:01,861 | INFO     | exitcode: 0
[2026-01-13 00:01:10] 2026-01-13 05:00:01,861 | INFO     | exitmsg: OK
[2026-01-13 00:01:10] 2026-01-13 05:00:01,861 | INFO     | cpuconsumptiontime: 32577 s
[2026-01-13 00:01:10] 2026-01-13 05:00:01,861 | INFO     | nevents: 400
[2026-01-13 00:01:10] 2026-01-13 05:00:01,861 | INFO     | neventsw: 0
[2026-01-13 00:01:10] 2026-01-13 05:00:01,861 | INFO     | pid: 2060323
[2026-01-13 00:01:10] 2026-01-13 05:00:01,861 | INFO     | pgrp: 2060323
[2026-01-13 00:01:10] 2026-01-13 05:00:01,861 | INFO     | corecount: 11
[2026-01-13 00:01:10] 2026-01-13 05:00:01,861 | INFO     | event service: False
[2026-01-13 00:01:10] 2026-01-13 05:00:01,861 | INFO     | sizes: {0: 2283969, 1: 2283997, 7: 2284259, 11: 2284287, 13973: 2315128, 13975: 2324126, 13977: 2324310, 13984: 2324504}
[2026-01-13 00:01:10] 2026-01-13 05:00:01,861 | INFO     | --------------------------------------------------
[2026-01-13 00:01:10] 2026-01-13 05:00:01,861 | INFO     | 
[2026-01-13 00:01:10] 2026-01-13 05:00:01,861 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-13 00:01:10] 2026-01-13 05:00:01,880 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 00:01:10] 2026-01-13 05:00:01,881 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 00:01:10] 2026-01-13 05:00:01,881 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 00:01:10] 2026-01-13 05:00:01,881 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 00:01:10] 2026-01-13 05:00:01,881 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 00:01:10] 2026-01-13 05:00:01,881 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 00:01:10] 2026-01-13 05:00:01,881 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 00:01:10] 2026-01-13 05:00:01,881 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 00:01:10] 2026-01-13 05:00:01,881 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 00:01:10] 2026-01-13 05:00:01,881 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 00:01:10] 2026-01-13 05:00:01,881 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 00:01:10] 2026-01-13 05:00:01,881 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 00:01:10] 2026-01-13 05:00:01,881 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 00:01:10] 2026-01-13 05:00:01,881 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 00:01:10] 2026-01-13 05:00:01,881 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 00:01:10] 2026-01-13 05:00:01,881 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 00:01:10] 2026-01-13 05:00:01,881 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 00:01:10] 2026-01-13 05:00:01,881 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 00:01:10] 2026-01-13 05:00:01,881 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 00:01:10] 2026-01-13 05:00:01,881 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 00:01:10] 2026-01-13 05:00:01,881 | INFO     | job 6963076726 has completed (purged errors)
[2026-01-13 00:01:10] 2026-01-13 05:00:01,881 | INFO     | overall cleanup function is called
[2026-01-13 00:01:10] 2026-01-13 05:00:02,889 | INFO     | --- collectZombieJob: --- 10, [2060323]
[2026-01-13 00:01:10] 2026-01-13 05:00:02,889 | INFO     | zombie collector waiting for pid 2060323
[2026-01-13 00:01:10] 2026-01-13 05:00:02,889 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 00:01:10] 2026-01-13 05:00:02,889 | INFO     | collected zombie processes
[2026-01-13 00:01:10] 2026-01-13 05:00:02,889 | INFO     | will attempt to kill all subprocesses of pid=2060323
[2026-01-13 00:01:10] 2026-01-13 05:00:03,340 | INFO     | process IDs to be killed: [2060323] (in reverse order)
[2026-01-13 00:01:10] 2026-01-13 05:00:03,518 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 00:01:10] 2026-01-13 05:00:03,519 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 00:01:10] 2026-01-13 05:00:03,546 | INFO     | did not find any defunct processes belonging to 2060323
[2026-01-13 00:01:10] 2026-01-13 05:00:03,572 | INFO     | did not find any defunct processes belonging to 2060323
[2026-01-13 00:01:10] 2026-01-13 05:00:03,572 | INFO     | ready for new job
[2026-01-13 00:01:10] 2026-01-13 05:00:03,572 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 00:01:10] 2026-01-13 05:00:03,574 | INFO     | ***************************************
[2026-01-13 00:01:10] 2026-01-13 05:00:03,574 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 00:01:10] 2026-01-13 05:00:03,574 | INFO     | ***************************************
[2026-01-13 00:01:10] 2026-01-13 05:00:03,574 | INFO     | 
[2026-01-13 00:01:10] 2026-01-13 05:00:03,579 | INFO     | architecture information:
[2026-01-13 00:01:10] 2026-01-13 05:00:03,579 | INFO     | executing command: cat /etc/os-release
[2026-01-13 00:01:10] 2026-01-13 05:00:03,598 | INFO     | cat /etc/os-release:
[2026-01-13 00:01:10] NAME="CentOS Linux"
[2026-01-13 00:01:10] VERSION="7 (Core)"
[2026-01-13 00:01:10] ID="centos"
[2026-01-13 00:01:10] ID_LIKE="rhel fedora"
[2026-01-13 00:01:10] VERSION_ID="7"
[2026-01-13 00:01:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 00:01:10] ANSI_COLOR="0;31"
[2026-01-13 00:01:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 00:01:10] HOME_URL="https://www.centos.org/"
[2026-01-13 00:01:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 00:01:10] 
[2026-01-13 00:01:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 00:01:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 00:01:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 00:01:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 00:01:10] 
[2026-01-13 00:01:10] 2026-01-13 05:00:03,598 | INFO     | ***************************************
[2026-01-13 00:01:10] 2026-01-13 05:00:04,101 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-13 00:01:10] 2026-01-13 05:00:04,115 | INFO     | sufficient remaining disk space (95684657152 B)
[2026-01-13 00:01:10] 2026-01-13 05:00:04,116 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 00:01:10] 2026-01-13 05:00:04,116 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 00:01:10] 2026-01-13 05:00:04,116 | INFO     | update_server=False
[2026-01-13 00:01:10] 2026-01-13 05:00:04,116 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 00:01:10] 2026-01-13 05:00:04,116 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 00:01:10] 2026-01-13 05:00:04,197 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 00:01:10] 2026-01-13 05:00:04,198 | INFO     | aborting loop
[2026-01-13 00:01:10] 2026-01-13 05:00:04,850 | INFO     | all data control threads have been joined
[2026-01-13 00:01:10] 2026-01-13 05:00:05,024 | INFO     | all payload control threads have been joined
[2026-01-13 00:01:10] 2026-01-13 05:00:05,121 | INFO     | [job] retrieve thread has finished
[2026-01-13 00:01:10] 2026-01-13 05:00:05,202 | INFO     | [job] job monitor thread has finished
[2026-01-13 00:01:10] 2026-01-13 05:00:05,240 | INFO     | all job control threads have been joined
[2026-01-13 00:01:10] 2026-01-13 05:00:05,599 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 00:01:10] 2026-01-13 05:00:05,632 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 00:01:10] 2026-01-13 05:00:05,847 | INFO     | [job] validate thread has finished
[2026-01-13 00:01:10] 2026-01-13 05:00:05,855 | INFO     | [data] control thread has finished
[2026-01-13 00:01:10] 2026-01-13 05:00:05,882 | INFO     | [payload] failed_post thread has finished
[2026-01-13 00:01:10] 2026-01-13 05:00:05,983 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 00:01:10] 2026-01-13 05:00:06,021 | INFO     | [data] copytool_in thread has finished
[2026-01-13 00:01:10] 2026-01-13 05:00:06,029 | INFO     | [payload] control thread has finished
[2026-01-13 00:01:10] 2026-01-13 05:00:06,121 | INFO     | [data] copytool_out thread has finished
[2026-01-13 00:01:10] 2026-01-13 05:00:06,246 | INFO     | [job] control thread has finished
[2026-01-13 00:01:10] 2026-01-13 05:00:06,304 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 00:01:10] 2026-01-13 05:00:06,441 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 00:01:10] 2026-01-13 05:00:06,523 | INFO     | [payload] validate_post thread has finished
[2026-01-13 00:01:10] 2026-01-13 05:00:06,870 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 00:01:10] 2026-01-13 05:00:07,876 | INFO     | [job] queue monitor thread has finished
[2026-01-13 00:01:10] 2026-01-13 05:00:09,640 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 00:01:10] 2026-01-13 05:00:34,856 | INFO     | PID=2051333 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 00:01:10] 2026-01-13 05:00:34,856 | INFO     | .. there are 45 such processes running
[2026-01-13 00:01:10] 2026-01-13 05:00:34,856 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 00:01:10] 2026-01-13 05:00:34,856 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 00:01:10] 2026-01-13 05:00:34,856 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 00:01:10] 2026-01-13 05:01:03,254 | INFO     | [monitor] cgroup control has ended
[2026-01-13 00:01:10] 2026-01-13 05:01:05,110 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140381048817472)>', '<ExcThread(monitor, started 140380192368384)>']
[2026-01-13 00:01:10] 2026-01-13 05:01:06,017 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 00:01:10] 2026-01-13 05:01:06,017 | INFO     | [monitor] control thread has ended
[2026-01-13 00:01:10] 2026-01-13 05:01:10,137 | INFO     | all workflow threads have been joined
[2026-01-13 00:01:10] 2026-01-13 05:01:10,137 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 00:01:10] 2026-01-13 05:01:10,137 | INFO     | traces error code: 0
[2026-01-13 00:01:10] 2026-01-13 05:01:10,137 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 00:01:10] 2026-01-13 05:01:10,265 [wrapper] ==== pilot stdout END ====
[2026-01-13 00:01:10] 2026-01-13 05:01:10,271 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 00:01:10] 2026-01-13 05:01:10,273 [wrapper] pilotpid: 2051333
[2026-01-13 00:01:10] 2026-01-13 05:01:10,276 [wrapper] Pilot exit status: 0
[2026-01-13 00:01:10] 2026-01-13 05:01:10,289 [wrapper] pandaids: 6963076726
[2026-01-13 00:01:10] 2026-01-13 05:01:10,419 [wrapper] cleanup supervisor_pilot  157545 2051334
[2026-01-13 00:01:10] 2026-01-13 05:01:10,422 [wrapper] Test setup, not cleaning
[2026-01-13 00:01:10] 2026-01-13 05:01:10,424 [wrapper] apfmon messages muted
[2026-01-13 00:01:10] 2026-01-13 05:01:10,426 [wrapper] ==== wrapper stdout END ====
[2026-01-13 00:01:10] 2026-01-13 05:01:10,429 [wrapper] ==== wrapper stderr END ====
[2026-01-13 00:01:10]  *** Error codes and diagnostics ***
[2026-01-13 00:01:10]     "exeErrorCode": 0,
[2026-01-13 00:01:10]     "exeErrorDiag": "",
[2026-01-13 00:01:10]     "pilotErrorCode": 0,
[2026-01-13 00:01:10]     "pilotErrorDiag": "",
[2026-01-13 00:01:10]  *** Listing of results directory ***
[2026-01-13 00:01:10] total 445180
[2026-01-13 00:01:10] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 06:06 pilot3.tar.gz
[2026-01-13 00:01:10] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 06:07 queuedata.json
[2026-01-13 00:01:10] -rwx------. 1 boincer umatlas     36322 Jan  8 06:07 runpilot2-wrapper.sh
[2026-01-13 00:01:10] -rw-r--r--. 1 boincer umatlas       100 Jan 12 20:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 00:01:10] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 12 20:06 run_atlas
[2026-01-13 00:01:10] -rw-r--r--. 1 boincer umatlas       105 Jan 12 20:06 job.xml
[2026-01-13 00:01:10] -rw-r--r--. 2 boincer umatlas 224557382 Jan 12 20:06 EVNT.47898824._000956.pool.root.1
[2026-01-13 00:01:10] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 20:06 start_atlas.sh
[2026-01-13 00:01:10] drwxrwx--x. 2 boincer umatlas      4096 Jan 12 20:06 shared
[2026-01-13 00:01:10] -rw-r--r--. 2 boincer umatlas    592396 Jan 12 20:06 input.tar.gz
[2026-01-13 00:01:10] -rw-r--r--. 1 boincer umatlas         0 Jan 12 20:06 boinc_lockfile
[2026-01-13 00:01:10] -rw-r--r--. 1 boincer umatlas      2519 Jan 12 20:06 pandaJob.out
[2026-01-13 00:01:10] -rw-------. 1 boincer umatlas        57 Jan 12 20:06 setup.sh.local
[2026-01-13 00:01:10] -rw-------. 1 boincer umatlas    987763 Jan 12 20:06 agis_schedconf.cvmfs.json
[2026-01-13 00:01:10] drwx------. 5 boincer umatlas      4096 Jan 12 20:06 pilot3
[2026-01-13 00:01:10] -rw-r--r--. 1 boincer umatlas      7171 Jan 12 23:57 init_data.xml
[2026-01-13 00:01:10] -rw-------. 1 boincer umatlas 222533493 Jan 12 23:59 HITS.47898826._024022.pool.root.1
[2026-01-13 00:01:10] -rw-r--r--. 1 boincer umatlas       531 Jan 12 23:59 boinc_task_state.xml
[2026-01-13 00:01:10] -rw-------. 1 boincer umatlas      1037 Jan 12 23:59 memory_monitor_summary.json
[2026-01-13 00:01:10] -rw-------. 1 boincer umatlas   1516240 Jan 12 23:59 agis_ddmendpoints.agis.ALL.json
[2026-01-13 00:01:10] -rw-------. 1 boincer umatlas    517668 Jan 12 23:59 log.47898826._024022.job.log.tgz.1
[2026-01-13 00:01:10] -rw-------. 1 boincer umatlas      7774 Jan 13 00:00 heartbeat.json
[2026-01-13 00:01:10] -rw-------. 1 boincer umatlas        95 Jan 13 00:00 pilot_heartbeat.json
[2026-01-13 00:01:10] -rw-------. 1 boincer umatlas      4824 Jan 13 00:01 pilotlog.txt
[2026-01-13 00:01:10] -rw-r--r--. 1 boincer umatlas        28 Jan 13 00:01 wrapper_checkpoint.txt
[2026-01-13 00:01:10] -rw-------. 1 boincer umatlas   1911489 Jan 13 00:01 log.47898826._024022.job.log.1
[2026-01-13 00:01:10] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 00:01 boinc_mmap_file
[2026-01-13 00:01:10] -rw-------. 1 boincer umatlas       357 Jan 13 00:01 output.list
[2026-01-13 00:01:10] -rw-r--r--. 1 boincer umatlas       620 Jan 13 00:01 runtime_log
[2026-01-13 00:01:10] -rw-------. 1 boincer umatlas   2447360 Jan 13 00:01 result.tar.gz
[2026-01-13 00:01:10] -rw-r--r--. 1 boincer umatlas      9335 Jan 13 00:01 runtime_log.err
[2026-01-13 00:01:10] -rw-------. 1 boincer umatlas       653 Jan 13 00:01 C4AODma22x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmI1eKDmitOVFn.diag
[2026-01-13 00:01:10] -rw-r--r--. 1 boincer umatlas     21400 Jan 13 00:01 stderr.txt
[2026-01-13 00:01:10] HITS file was successfully produced:
[2026-01-13 00:01:10] -rw-------. 1 boincer umatlas 222533493 Jan 12 23:59 shared/HITS.pool.root.1
[2026-01-13 00:01:10]  *** Contents of shared directory: ***
[2026-01-13 00:01:10] total 439608
[2026-01-13 00:01:10] -rw-r--r--. 2 boincer umatlas 224557382 Jan 12 20:06 ATLAS.root_0
[2026-01-13 00:01:10] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 20:06 start_atlas.sh
[2026-01-13 00:01:10] -rw-r--r--. 2 boincer umatlas    592396 Jan 12 20:06 input.tar.gz
[2026-01-13 00:01:10] -rw-------. 1 boincer umatlas 222533493 Jan 12 23:59 HITS.pool.root.1
[2026-01-13 00:01:10] -rw-------. 1 boincer umatlas   2447360 Jan 13 00:01 result.tar.gz
00:01:12 (2047049): run_atlas exited; CPU time 33143.182835
00:01:12 (2047049): called boinc_finish(0)

</stderr_txt>
]]>

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