Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:29:36 (1405060): wrapper (7.7.26015): starting
19:29:36 (1405060): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 19:29:36] Arguments: --nthreads 8
[2026-01-12 19:29:36] Threads: 8
[2026-01-12 19:29:36] Checking for CVMFS
[2026-01-12 19:29:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 19:29:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 19:29:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 19:29:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 19:29:41] 2.13.3.0 13071 35118 302684 155071 1 169 18804304 32935936 21861 16776704 0 31824757 99.747 27194164 14281 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 19:29:41] CVMFS is ok
[2026-01-12 19:29:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 19:29:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 19:29:41] Further information can be found at the LHC@home message board.
[2026-01-12 19:29:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 19:29:41] Checking for apptainer binary...
[2026-01-12 19:29:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 19:29:41] Running /usr/bin/apptainer --version
[2026-01-12 19:29:41] apptainer version 1.4.5-2.el9
[2026-01-12 19:29:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 19:29:42] c6-12-25-1.aglt2.org
[2026-01-12 19:29:42] apptainer works
[2026-01-12 19:29:42] Set ATHENA_PROC_NUMBER=8
[2026-01-12 19:29:42] Set ATHENA_CORE_NUMBER=8
[2026-01-12 19:29:42] Starting ATLAS job with PandaID=6968009791
[2026-01-12 19:29:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:00:11 (1405060): BOINC client no longer exists - exiting
18:00:11 (1405060): timer handler: client dead, exiting
18:13:24 (1102254): wrapper (7.7.26015): starting
18:13:24 (1102254): wrapper: running run_atlas (--nthreads 8)
[2026-01-13 18:13:24] Arguments: --nthreads 8
[2026-01-13 18:13:24] Threads: 8
[2026-01-13 18:13:24] This job has been restarted, cleaning up previous attempt
[2026-01-13 18:13:25] Checking for CVMFS
[2026-01-13 18:13:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 18:13:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 18:13:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 18:13:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 18:13:26] 2.13.3.0 13071 36482 323872 155107 1 557 25726621 32935937 18243 16776704 0 35177927 99.739 30379800 14066 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-13 18:13:26] CVMFS is ok
[2026-01-13 18:13:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 18:13:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 18:13:26] Further information can be found at the LHC@home message board.
[2026-01-13 18:13:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 18:13:26] Checking for apptainer binary...
[2026-01-13 18:13:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 18:13:26] Running /usr/bin/apptainer --version
[2026-01-13 18:13:26] apptainer version 1.4.5-2.el9
[2026-01-13 18:13:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 18:13:26] c6-12-25-1.aglt2.org
[2026-01-13 18:13:26] apptainer works
[2026-01-13 18:13:26] Set ATHENA_PROC_NUMBER=8
[2026-01-13 18:13:26] Set ATHENA_CORE_NUMBER=8
[2026-01-13 18:13:26] Starting ATLAS job with PandaID=6968009791
[2026-01-13 18:13:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 10:47:21]  *** The last 200 lines of the pilot log: ***
[2026-01-14 10:47:22] 2026-01-14 15:46:12,976 | INFO     | mean y: 2551408.86550308
[2026-01-14 10:47:22] 2026-01-14 15:46:12,977 | INFO     | intersect: 2981522512.029558
[2026-01-14 10:47:22] 2026-01-14 15:46:12,992 | INFO     | chi2: 12.05597347390899
[2026-01-14 10:47:22] 2026-01-14 15:46:13,007 | INFO     | sum of square deviations: 282165691576.3278
[2026-01-14 10:47:22] 2026-01-14 15:46:13,235 | INFO     | monitor loop #2087: job 0:6968009791 is in state 'finished'
[2026-01-14 10:47:22] 2026-01-14 15:46:13,235 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:47:22] 2026-01-14 15:46:13,251 | INFO     | sum of deviations: -168603132743.02402
[2026-01-14 10:47:22] 2026-01-14 15:46:13,252 | INFO     | mean x: 1768375611.389061
[2026-01-14 10:47:22] 2026-01-14 15:46:13,252 | INFO     | mean y: 2562321.8090815274
[2026-01-14 10:47:22] 2026-01-14 15:46:13,252 | INFO     | intersect: 1059223981.4208895
[2026-01-14 10:47:22] 2026-01-14 15:46:13,267 | INFO     | chi2: 8.39568539766121
[2026-01-14 10:47:22] 2026-01-14 15:46:13,268 | INFO     | current chi2=8.39568539766121 (change=30.36078408905939 %)
[2026-01-14 10:47:22] 2026-01-14 15:46:13,283 | INFO     | sum of square deviations: 277821317066.833
[2026-01-14 10:47:22] 2026-01-14 15:46:13,610 | INFO     | sum of deviations: 146072062515.78696
[2026-01-14 10:47:22] 2026-01-14 15:46:13,611 | INFO     | mean x: 1768375458.8973029
[2026-01-14 10:47:22] 2026-01-14 15:46:13,611 | INFO     | mean y: 2573367.341286307
[2026-01-14 10:47:22] 2026-01-14 15:46:13,611 | INFO     | intersect: -927197801.086696
[2026-01-14 10:47:22] 2026-01-14 15:46:13,619 | INFO     | chi2: 4.8101823019389425
[2026-01-14 10:47:22] 2026-01-14 15:46:13,620 | INFO     | current chi2=4.8101823019389425 (change=42.70649656216373 %)
[2026-01-14 10:47:22] 2026-01-14 15:46:13,644 | INFO     | sum of square deviations: 273521427406.03952
[2026-01-14 10:47:22] 2026-01-14 15:46:13,937 | INFO     | sum of deviations: 400982450598.5671
[2026-01-14 10:47:22] 2026-01-14 15:46:13,937 | INFO     | mean x: 1768375306.3993742
[2026-01-14 10:47:22] 2026-01-14 15:46:13,938 | INFO     | mean y: 2582398.6120959334
[2026-01-14 10:47:22] 2026-01-14 15:46:13,938 | INFO     | intersect: -2589856046.3854165
[2026-01-14 10:47:22] 2026-01-14 15:46:13,963 | INFO     | chi2: 1.8535140729289892
[2026-01-14 10:47:22] 2026-01-14 15:46:13,964 | INFO     | current chi2=1.8535140729289892 (change=61.466864318596535 %)
[2026-01-14 10:47:22] 2026-01-14 15:46:13,972 | INFO     | sum of square deviations: 269265265706.54596
[2026-01-14 10:47:22] 2026-01-14 15:46:14,375 | INFO     | time since job start (59541s) is within the limit (349056.0s)
[2026-01-14 10:47:22] 2026-01-14 15:46:14,514 | INFO     | sum of deviations: 398037025280.19855
[2026-01-14 10:47:22] 2026-01-14 15:46:14,515 | INFO     | mean x: 1768375153.8857443
[2026-01-14 10:47:22] 2026-01-14 15:46:14,515 | INFO     | mean y: 2582293.066037736
[2026-01-14 10:47:22] 2026-01-14 15:46:14,515 | INFO     | intersect: -2611489685.3049307
[2026-01-14 10:47:22] 2026-01-14 15:46:14,549 | INFO     | chi2: 1.8534408280729966
[2026-01-14 10:47:22] 2026-01-14 15:46:14,550 | INFO     | current chi2=1.8534408280729966 (change=0.0039516752023812975 %)
[2026-01-14 10:47:22] 2026-01-14 15:46:14,550 | INFO     | right removable region: 953
[2026-01-14 10:47:22] 2026-01-14 15:46:14,595 | INFO     | sum of square deviations: 282164456198.98047
[2026-01-14 10:47:22] 2026-01-14 15:46:15,401 | INFO     | sum of deviations: -662167471959.4705
[2026-01-14 10:47:22] 2026-01-14 15:46:15,402 | INFO     | mean x: 1768375916.3921568
[2026-01-14 10:47:22] 2026-01-14 15:46:15,402 | INFO     | mean y: 2557630.306501548
[2026-01-14 10:47:22] 2026-01-14 15:46:15,402 | INFO     | intersect: 4152481493.1677136
[2026-01-14 10:47:22] 2026-01-14 15:46:15,514 | INFO     | chi2: 10.46833576139726
[2026-01-14 10:47:22] 2026-01-14 15:46:15,514 | INFO     | current chi2=10.46833576139726 (change=13.168888567543934 %)
[2026-01-14 10:47:22] 2026-01-14 15:46:15,514 | INFO     | left removable region: 10
[2026-01-14 10:47:22] 2026-01-14 15:46:15,593 | INFO     | sum of square deviations: 260057942208.53302
[2026-01-14 10:47:22] 2026-01-14 15:46:15,811 | INFO     | monitor loop #2088: job 0:6968009791 is in state 'finished'
[2026-01-14 10:47:22] 2026-01-14 15:46:15,812 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-14 10:47:22] 2026-01-14 15:46:16,482 | INFO     | time since job start (59543s) is within the limit (349056.0s)
[2026-01-14 10:47:22] 2026-01-14 15:46:16,873 | INFO     | sum of deviations: 194790445723.1929
[2026-01-14 10:47:22] 2026-01-14 15:46:16,874 | INFO     | mean x: 1768375428.4125133
[2026-01-14 10:47:22] 2026-01-14 15:46:16,874 | INFO     | mean y: 2589620.5599151645
[2026-01-14 10:47:22] 2026-01-14 15:46:16,874 | INFO     | intersect: -1321971494.4788284
[2026-01-14 10:47:22] 2026-01-14 15:46:16,891 | INFO     | chi2: 0.18581627124840813
[2026-01-14 10:47:22] 2026-01-14 15:46:16,891 | INFO     | current memory leak: 0.75 B/s (using 943 data points, chi2=0.19)
[2026-01-14 10:47:22] 2026-01-14 15:46:17,007 | INFO     | could have reported an average CPU frequency of 1000 MHz (35 samples)
[2026-01-14 10:47:22] 2026-01-14 15:46:17,008 | INFO     | ..............................
[2026-01-14 10:47:22] 2026-01-14 15:46:17,008 | INFO     | . Timing measurements:
[2026-01-14 10:47:22] 2026-01-14 15:46:17,008 | INFO     | . get job = 0 s
[2026-01-14 10:47:22] 2026-01-14 15:46:17,009 | INFO     | . initial setup = 3 s
[2026-01-14 10:47:22] 2026-01-14 15:46:17,009 | INFO     | . payload setup = 17 s
[2026-01-14 10:47:22] 2026-01-14 15:46:17,009 | INFO     | . stage-in = 0 s
[2026-01-14 10:47:22] 2026-01-14 15:46:17,009 | INFO     | . payload execution = 59412 s
[2026-01-14 10:47:22] 2026-01-14 15:46:17,009 | INFO     | . stage-out = 21 s
[2026-01-14 10:47:22] 2026-01-14 15:46:17,010 | INFO     | . log creation = 11 s
[2026-01-14 10:47:22] 2026-01-14 15:46:17,010 | INFO     | ..............................
[2026-01-14 10:47:22] 2026-01-14 15:46:18,579 | INFO     | time since job start (59545s) is within the limit (349056.0s)
[2026-01-14 10:47:22] 2026-01-14 15:46:19,961 | INFO     | 
[2026-01-14 10:47:22] 2026-01-14 15:46:19,961 | INFO     | job summary report
[2026-01-14 10:47:22] 2026-01-14 15:46:19,962 | INFO     | --------------------------------------------------
[2026-01-14 10:47:22] 2026-01-14 15:46:19,962 | INFO     | PanDA job id: 6968009791
[2026-01-14 10:47:22] 2026-01-14 15:46:19,962 | INFO     | task id: 48188673
[2026-01-14 10:47:22] 2026-01-14 15:46:19,962 | INFO     | errors: (none)
[2026-01-14 10:47:22] 2026-01-14 15:46:19,962 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 10:47:22] 2026-01-14 15:46:19,963 | INFO     | pilot state: finished 
[2026-01-14 10:47:22] 2026-01-14 15:46:19,963 | INFO     | transexitcode: 0
[2026-01-14 10:47:22] 2026-01-14 15:46:19,963 | INFO     | exeerrorcode: 0
[2026-01-14 10:47:22] 2026-01-14 15:46:19,963 | INFO     | exeerrordiag: 
[2026-01-14 10:47:22] 2026-01-14 15:46:19,963 | INFO     | exitcode: 0
[2026-01-14 10:47:22] 2026-01-14 15:46:19,963 | INFO     | exitmsg: OK
[2026-01-14 10:47:22] 2026-01-14 15:46:19,964 | INFO     | cpuconsumptiontime: 160659 s
[2026-01-14 10:47:22] 2026-01-14 15:46:19,964 | INFO     | nevents: 400
[2026-01-14 10:47:22] 2026-01-14 15:46:19,964 | INFO     | neventsw: 0
[2026-01-14 10:47:22] 2026-01-14 15:46:19,964 | INFO     | pid: 1153602
[2026-01-14 10:47:22] 2026-01-14 15:46:19,964 | INFO     | pgrp: 1153602
[2026-01-14 10:47:22] 2026-01-14 15:46:20,010 | INFO     | corecount: 8
[2026-01-14 10:47:22] 2026-01-14 15:46:20,010 | INFO     | event service: False
[2026-01-14 10:47:22] 2026-01-14 15:46:20,010 | INFO     | sizes: {0: 2283901, 1: 2283985, 2: 2284156, 12: 2284446, 13: 2284474, 59436: 2332142, 59438: 2332269, 59461: 2341323, 59464: 2341379, 59523: 2341573}
[2026-01-14 10:47:22] 2026-01-14 15:46:20,011 | INFO     | --------------------------------------------------
[2026-01-14 10:47:22] 2026-01-14 15:46:20,011 | INFO     | 
[2026-01-14 10:47:22] 2026-01-14 15:46:20,011 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-14 10:47:22] 2026-01-14 15:46:20,308 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 10:47:22] 2026-01-14 15:46:20,309 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 10:47:22] 2026-01-14 15:46:20,309 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 10:47:22] 2026-01-14 15:46:20,309 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 10:47:22] 2026-01-14 15:46:20,328 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 10:47:22] 2026-01-14 15:46:20,328 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 10:47:22] 2026-01-14 15:46:20,328 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 10:47:22] 2026-01-14 15:46:20,329 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 10:47:22] 2026-01-14 15:46:20,329 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 10:47:22] 2026-01-14 15:46:20,329 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 10:47:22] 2026-01-14 15:46:20,329 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 10:47:22] 2026-01-14 15:46:20,329 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 10:47:22] 2026-01-14 15:46:20,330 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 10:47:22] 2026-01-14 15:46:20,330 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 10:47:22] 2026-01-14 15:46:20,330 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 10:47:22] 2026-01-14 15:46:20,330 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 10:47:22] 2026-01-14 15:46:20,330 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 10:47:22] 2026-01-14 15:46:20,331 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 10:47:22] 2026-01-14 15:46:20,331 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 10:47:22] 2026-01-14 15:46:20,331 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 10:47:22] 2026-01-14 15:46:20,331 | INFO     | job 6968009791 has completed (purged errors)
[2026-01-14 10:47:22] 2026-01-14 15:46:20,332 | INFO     | overall cleanup function is called
[2026-01-14 10:47:22] 2026-01-14 15:46:21,361 | INFO     | --- collectZombieJob: --- 10, [1153602]
[2026-01-14 10:47:22] 2026-01-14 15:46:21,361 | INFO     | zombie collector waiting for pid 1153602
[2026-01-14 10:47:22] 2026-01-14 15:46:21,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 10:47:22] 2026-01-14 15:46:21,362 | INFO     | collected zombie processes
[2026-01-14 10:47:22] 2026-01-14 15:46:21,362 | INFO     | will attempt to kill all subprocesses of pid=1153602
[2026-01-14 10:47:22] 2026-01-14 15:46:23,460 | INFO     | process IDs to be killed: [1153602] (in reverse order)
[2026-01-14 10:47:22] 2026-01-14 15:46:25,355 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 10:47:22] 2026-01-14 15:46:25,358 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 10:47:22] 2026-01-14 15:46:25,491 | INFO     | did not find any defunct processes belonging to 1153602
[2026-01-14 10:47:22] 2026-01-14 15:46:25,765 | INFO     | did not find any defunct processes belonging to 1153602
[2026-01-14 10:47:22] 2026-01-14 15:46:25,784 | INFO     | ready for new job
[2026-01-14 10:47:22] 2026-01-14 15:46:25,785 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 10:47:22] 2026-01-14 15:46:25,837 | INFO     | ***************************************
[2026-01-14 10:47:22] 2026-01-14 15:46:25,838 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 10:47:22] 2026-01-14 15:46:25,838 | INFO     | ***************************************
[2026-01-14 10:47:22] 2026-01-14 15:46:25,838 | INFO     | 
[2026-01-14 10:47:22] 2026-01-14 15:46:25,925 | INFO     | architecture information:
[2026-01-14 10:47:22] 2026-01-14 15:46:25,976 | INFO     | executing command: cat /etc/os-release
[2026-01-14 10:47:22] 2026-01-14 15:46:26,197 | INFO     | cat /etc/os-release:
[2026-01-14 10:47:22] NAME="CentOS Linux"
[2026-01-14 10:47:22] VERSION="7 (Core)"
[2026-01-14 10:47:22] ID="centos"
[2026-01-14 10:47:22] ID_LIKE="rhel fedora"
[2026-01-14 10:47:22] VERSION_ID="7"
[2026-01-14 10:47:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 10:47:22] ANSI_COLOR="0;31"
[2026-01-14 10:47:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 10:47:22] HOME_URL="https://www.centos.org/"
[2026-01-14 10:47:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 10:47:22] 
[2026-01-14 10:47:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 10:47:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 10:47:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 10:47:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 10:47:22] 
[2026-01-14 10:47:22] 2026-01-14 15:46:26,198 | INFO     | ***************************************
[2026-01-14 10:47:22] 2026-01-14 15:46:26,702 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-14 10:47:22] 2026-01-14 15:46:26,896 | INFO     | sufficient remaining disk space (67394076672 B)
[2026-01-14 10:47:22] 2026-01-14 15:46:26,897 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 10:47:22] 2026-01-14 15:46:26,897 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 10:47:22] 2026-01-14 15:46:26,898 | INFO     | update_server=False
[2026-01-14 10:47:22] 2026-01-14 15:46:26,898 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 10:47:22] 2026-01-14 15:46:27,208 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 10:47:22] 2026-01-14 15:46:27,208 | INFO     | aborting loop
[2026-01-14 10:47:22] 2026-01-14 15:46:27,292 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 10:47:22] 2026-01-14 15:46:27,474 | INFO     | all job control threads have been joined
[2026-01-14 10:47:22] 2026-01-14 15:46:27,903 | INFO     | [job] retrieve thread has finished
[2026-01-14 10:47:22] 2026-01-14 15:46:27,927 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 10:47:22] 2026-01-14 15:46:27,935 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 10:47:22] 2026-01-14 15:46:27,982 | INFO     | all data control threads have been joined
[2026-01-14 10:47:22] 2026-01-14 15:46:27,982 | INFO     | all payload control threads have been joined
[2026-01-14 10:47:22] 2026-01-14 15:46:28,090 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 10:47:22] 2026-01-14 15:46:28,215 | INFO     | [job] job monitor thread has finished
[2026-01-14 10:47:22] 2026-01-14 15:46:28,484 | INFO     | [job] control thread has finished
[2026-01-14 10:47:22] 2026-01-14 15:46:28,549 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 10:47:22] 2026-01-14 15:46:28,550 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 10:47:22] 2026-01-14 15:46:28,551 | INFO     | [job] validate thread has finished
[2026-01-14 10:47:22] 2026-01-14 15:46:28,551 | INFO     | [data] copytool_in thread has finished
[2026-01-14 10:47:22] 2026-01-14 15:46:28,891 | INFO     | [payload] failed_post thread has finished
[2026-01-14 10:47:22] 2026-01-14 15:46:28,897 | INFO     | [payload] validate_post thread has finished
[2026-01-14 10:47:22] 2026-01-14 15:46:28,988 | INFO     | [data] control thread has finished
[2026-01-14 10:47:22] 2026-01-14 15:46:28,994 | INFO     | [payload] control thread has finished
[2026-01-14 10:47:22] 2026-01-14 15:46:29,056 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 10:47:22] 2026-01-14 15:46:30,063 | INFO     | [job] queue monitor thread has finished
[2026-01-14 10:47:22] 2026-01-14 15:46:30,097 | INFO     | [data] copytool_out thread has finished
[2026-01-14 10:47:22] 2026-01-14 15:46:31,301 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 10:47:22] 2026-01-14 15:46:52,388 | INFO     | [monitor] cgroup control has ended
[2026-01-14 10:47:22] 2026-01-14 15:46:52,661 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139673608202048)>', '<ExcThread(monitor, started 139673242416896)>']
[2026-01-14 10:47:22] 2026-01-14 15:46:57,706 | INFO     | all workflow threads have been joined
[2026-01-14 10:47:22] 2026-01-14 15:46:57,706 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 10:47:22] 2026-01-14 15:46:57,707 | INFO     | traces error code: 0
[2026-01-14 10:47:22] 2026-01-14 15:46:57,707 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 10:47:22] 2026-01-14 15:46:58,292 | INFO     | PID=1121291 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-14 10:47:22] 2026-01-14 15:46:58,293 | INFO     | .. there are 27 such processes running
[2026-01-14 10:47:22] 2026-01-14 15:46:58,294 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 10:47:22] 2026-01-14 15:46:58,295 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 10:47:22] 2026-01-14 15:46:58,295 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 10:47:22] 2026-01-14 15:46:58,295 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 10:47:22] 2026-01-14 15:46:58,295 | INFO     | [monitor] control thread has ended
[2026-01-14 10:47:22] 2026-01-14 15:46:58,665 [wrapper] ==== pilot stdout END ====
[2026-01-14 10:47:22] 2026-01-14 15:46:58,720 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 10:47:22] 2026-01-14 15:46:58,773 [wrapper] pilotpid: 1121291
[2026-01-14 10:47:22] 2026-01-14 15:46:58,818 [wrapper] Pilot exit status: 0
[2026-01-14 10:47:22] 2026-01-14 15:46:58,994 [wrapper] pandaids: 6968009791 6968009791
[2026-01-14 10:47:22] 2026-01-14 15:47:00,361 [wrapper] cleanup supervisor_pilot 4183315 1121293
[2026-01-14 10:47:22] 2026-01-14 15:47:00,374 [wrapper] Test setup, not cleaning
[2026-01-14 10:47:22] 2026-01-14 15:47:00,392 [wrapper] apfmon messages muted
[2026-01-14 10:47:22] 2026-01-14 15:47:00,422 [wrapper] ==== wrapper stdout END ====
[2026-01-14 10:47:22] 2026-01-14 15:47:00,448 [wrapper] ==== wrapper stderr END ====
[2026-01-14 10:47:22]  *** Error codes and diagnostics ***
[2026-01-14 10:47:22]     "exeErrorCode": 0,
[2026-01-14 10:47:22]     "exeErrorDiag": "",
[2026-01-14 10:47:22]     "pilotErrorCode": 0,
[2026-01-14 10:47:22]     "pilotErrorDiag": "",
[2026-01-14 10:47:22]  *** Listing of results directory ***
[2026-01-14 10:47:22] total 984108
[2026-01-14 10:47:22] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-14 10:47:22] -rw-r--r--. 1 boincer umatlas    579449 Jan 12 19:14 pilot3.tar.gz
[2026-01-14 10:47:22] -rwx------. 1 boincer umatlas     36322 Jan 12 19:26 runpilot2-wrapper.sh
[2026-01-14 10:47:22] -rw-r--r--. 1 boincer umatlas      5112 Jan 12 19:26 queuedata.json
[2026-01-14 10:47:22] -rw-r--r--. 1 boincer umatlas       100 Jan 12 19:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 10:47:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 12 19:29 run_atlas
[2026-01-14 10:47:22] -rw-r--r--. 1 boincer umatlas       105 Jan 12 19:29 job.xml
[2026-01-14 10:47:22] -rw-r--r--. 3 boincer umatlas 351641227 Jan 12 19:29 EVNT.48188671._000007.pool.root.1
[2026-01-14 10:47:22] -rw-r--r--. 3 boincer umatlas 351641227 Jan 12 19:29 ATLAS.root_0
[2026-01-14 10:47:22] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 19:29 start_atlas.sh
[2026-01-14 10:47:22] drwxrwx--x. 2 boincer umatlas      4096 Jan 12 19:29 shared
[2026-01-14 10:47:22] -rw-r--r--. 2 boincer umatlas    592408 Jan 12 19:29 input.tar.gz
[2026-01-14 10:47:22] -rw-r--r--. 1 boincer umatlas         0 Jan 12 19:29 boinc_lockfile
[2026-01-14 10:47:22] -rw-r--r--. 1 boincer umatlas      2632 Jan 13 18:13 pandaJob.out
[2026-01-14 10:47:22] -rw-------. 1 boincer umatlas        57 Jan 13 18:13 setup.sh.local
[2026-01-14 10:47:22] -rw-------. 1 boincer umatlas    997226 Jan 13 18:13 agis_schedconf.cvmfs.json
[2026-01-14 10:47:22] -rw-------. 1 boincer umatlas 288125165 Jan 14 10:29 HITS.48188673._000157.pool.root.1
[2026-01-14 10:47:22] -rw-r--r--. 1 boincer umatlas       533 Jan 14 10:30 boinc_task_state.xml
[2026-01-14 10:47:22] -rw-r--r--. 1 boincer umatlas      6859 Jan 14 10:37 init_data.xml
[2026-01-14 10:47:22] -rw-------. 1 boincer umatlas      1054 Jan 14 10:44 memory_monitor_summary.json
[2026-01-14 10:47:22] -rw-------. 1 boincer umatlas   1516246 Jan 14 10:44 agis_ddmendpoints.agis.ALL.json
[2026-01-14 10:47:22] -rw-------. 1 boincer umatlas    968507 Jan 14 10:45 log.48188673._000157.job.log.tgz.1
[2026-01-14 10:47:22] -rw-------. 1 boincer umatlas      7852 Jan 14 10:46 heartbeat.json
[2026-01-14 10:47:22] -rw-------. 1 boincer umatlas        96 Jan 14 10:46 pilot_heartbeat.json
[2026-01-14 10:47:22] -rw-------. 1 boincer umatlas       823 Jan 14 10:46 pilotlog.txt
[2026-01-14 10:47:22] -rw-------. 1 boincer umatlas   5232878 Jan 14 10:47 log.48188673._000157.job.log.1
[2026-01-14 10:47:22] -rw-------. 1 boincer umatlas       357 Jan 14 10:47 output.list
[2026-01-14 10:47:22] -rw-r--r--. 1 boincer umatlas       620 Jan 14 10:47 runtime_log
[2026-01-14 10:47:22] -rw-------. 1 boincer umatlas   6215680 Jan 14 10:47 result.tar.gz
[2026-01-14 10:47:22] -rw-------. 1 boincer umatlas       790 Jan 14 10:47 Y9sLDmePhz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9tnKDm8QFZHn.diag
[2026-01-14 10:47:22] -rw-r--r--. 1 boincer umatlas      9438 Jan 14 10:47 runtime_log.err
[2026-01-14 10:47:22] -rw-r--r--. 1 boincer umatlas        29 Jan 14 10:47 wrapper_checkpoint.txt
[2026-01-14 10:47:22] -rw-r--r--. 1 boincer umatlas      8192 Jan 14 10:47 boinc_mmap_file
[2026-01-14 10:47:22] -rw-r--r--. 1 boincer umatlas     21419 Jan 14 10:47 stderr.txt
[2026-01-14 10:47:22] HITS file was successfully produced:
[2026-01-14 10:47:22] -rw-------. 1 boincer umatlas 288125165 Jan 14 10:29 shared/HITS.pool.root.1
[2026-01-14 10:47:22]  *** Contents of shared directory: ***
[2026-01-14 10:47:22] total 631448
[2026-01-14 10:47:22] -rw-r--r--. 3 boincer umatlas 351641227 Jan 12 19:29 ATLAS.root_0
[2026-01-14 10:47:22] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 19:29 start_atlas.sh
[2026-01-14 10:47:22] -rw-r--r--. 2 boincer umatlas    592408 Jan 12 19:29 input.tar.gz
[2026-01-14 10:47:22] -rw-------. 1 boincer umatlas 288125165 Jan 14 10:29 HITS.pool.root.1
[2026-01-14 10:47:22] -rw-------. 1 boincer umatlas   6215680 Jan 14 10:47 result.tar.gz
10:47:24 (1102254): run_atlas exited; CPU time 165454.766407
10:47:24 (1102254): called boinc_finish(0)

</stderr_txt>
]]>

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