Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:04:14 (3419859): wrapper (7.7.26015): starting
05:04:14 (3419859): wrapper: running run_atlas (--nthreads 3)
[2026-01-13 05:04:14] Arguments: --nthreads 3
[2026-01-13 05:04:14] Threads: 3
[2026-01-13 05:04:14] Checking for CVMFS
[2026-01-13 05:04:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 05:04:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 05:04:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 05:04:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 05:04:14] 2.9.2.0 3271287 1153 65072 155075 0 68 22545799 36864000 0 130560 0 402128 99.981 39592 11003 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-13 05:04:14] CVMFS is ok
[2026-01-13 05:04:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 05:04:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 05:04:14] Further information can be found at the LHC@home message board.
[2026-01-13 05:04:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 05:04:14] Checking for apptainer binary...
[2026-01-13 05:04:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 05:04:14] Running /usr/bin/apptainer --version
[2026-01-13 05:04:14] apptainer version 1.4.1-1.1
[2026-01-13 05:04:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 05:04:14] magicA246
[2026-01-13 05:04:14] apptainer works
[2026-01-13 05:04:14] Set ATHENA_PROC_NUMBER=3
[2026-01-13 05:04:14] Set ATHENA_CORE_NUMBER=3
[2026-01-13 05:04:14] Starting ATLAS job with PandaID=6968009653
[2026-01-13 05:04:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 07:01:53]  *** The last 200 lines of the pilot log: ***
[2026-01-13 07:01:53] 2026-01-13 06:01:23,645 | INFO     | all payload control threads have been joined
[2026-01-13 07:01:53] 2026-01-13 06:01:23,791 | INFO     | all data control threads have been joined
[2026-01-13 07:01:53] 2026-01-13 06:01:23,949 | INFO     | [job] retrieve thread has finished
[2026-01-13 07:01:53] 2026-01-13 06:01:23,949 | INFO     | [job] job monitor thread has finished
[2026-01-13 07:01:53] 2026-01-13 06:01:24,513 | INFO     | all job control threads have been joined
[2026-01-13 07:01:53] 2026-01-13 06:01:24,599 | INFO     | [payload] validate_post thread has finished
[2026-01-13 07:01:53] 2026-01-13 06:01:24,649 | INFO     | [payload] control thread has finished
[2026-01-13 07:01:53] 2026-01-13 06:01:24,666 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 07:01:53] 2026-01-13 06:01:24,793 | INFO     | [data] control thread has finished
[2026-01-13 07:01:53] 2026-01-13 06:01:24,882 | INFO     | [payload] failed_post thread has finished
[2026-01-13 07:01:53] 2026-01-13 06:01:25,178 | INFO     | [data] copytool_in thread has finished
[2026-01-13 07:01:53] 2026-01-13 06:01:25,248 | INFO     | [data] copytool_out thread has finished
[2026-01-13 07:01:53] 2026-01-13 06:01:25,336 | INFO     | [job] validate thread has finished
[2026-01-13 07:01:53] 2026-01-13 06:01:25,368 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 07:01:53] 2026-01-13 06:01:25,417 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 07:01:53] 2026-01-13 06:01:25,418 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 07:01:53] 2026-01-13 06:01:25,519 | INFO     | [job] control thread has finished
[2026-01-13 07:01:53] 2026-01-13 06:01:25,880 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 07:01:53] 2026-01-13 06:01:26,886 | INFO     | [job] queue monitor thread has finished
[2026-01-13 07:01:53] 2026-01-13 06:01:28,673 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 07:01:53] 2026-01-13 06:01:28,772 | INFO     | [monitor] cgroup control has ended
[2026-01-13 07:01:53] 2026-01-13 06:01:33,150 | INFO     | job.realtimelogging is not enabled
[2026-01-13 07:01:53] 2026-01-13 06:01:34,156 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 07:01:53] 2026-01-13 06:01:34,567 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139692721719104)>', '<ExcThread(monitor, started 139692360050432)>']
[2026-01-13 07:01:53] 2026-01-13 06:01:39,593 | INFO     | all workflow threads have been joined
[2026-01-13 07:01:53] 2026-01-13 06:01:39,593 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 07:01:53] 2026-01-13 06:01:39,594 | INFO     | traces error code: 0
[2026-01-13 07:01:53] 2026-01-13 06:01:39,594 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 07:01:53] 2026-01-13 06:01:53,532 | INFO     | PID=3423583 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 07:01:53] 2026-01-13 06:01:53,532 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 07:01:53] 2026-01-13 06:01:53,532 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 07:01:53] 2026-01-13 06:01:53,532 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 07:01:53] 2026-01-13 06:01:53,532 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 07:01:53] 2026-01-13 06:01:53,532 | INFO     | [monitor] control thread has ended
[2026-01-13 07:01:53] 2026-01-13 06:01:53,583 [wrapper] ==== pilot stdout END ====
[2026-01-13 07:01:53] 2026-01-13 06:01:53,586 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 07:01:53] 2026-01-13 06:01:53,588 [wrapper] pilotpid: 3423583
[2026-01-13 07:01:53] 2026-01-13 06:01:53,591 [wrapper] Pilot exit status: 0
[2026-01-13 07:01:53] 2026-01-13 06:01:53,599 [wrapper] pandaids: 6968009653
[2026-01-13 07:01:53] 2026-01-13 06:01:53,617 [wrapper] cleanup supervisor_pilot 3444644 3423584
[2026-01-13 07:01:53] 2026-01-13 06:01:53,620 [wrapper] Test setup, not cleaning
[2026-01-13 07:01:53] 2026-01-13 06:01:53,622 [wrapper] apfmon messages muted
[2026-01-13 07:01:53] 2026-01-13 06:01:53,625 [wrapper] ==== wrapper stdout END ====
[2026-01-13 07:01:53] 2026-01-13 06:01:53,627 [wrapper] ==== wrapper stderr END ====
[2026-01-13 07:01:53]  *** Error codes and diagnostics ***
[2026-01-13 07:01:53]     "exeErrorCode": 0,
[2026-01-13 07:01:53]     "exeErrorDiag": "",
[2026-01-13 07:01:53]     "pilotErrorCode": 0,
[2026-01-13 07:01:53]     "pilotErrorDiag": "",
[2026-01-13 07:01:53]  *** Listing of results directory ***
[2026-01-13 07:01:53] total 635088
[2026-01-13 07:01:53] -rw-r--r-- 1 boinc boinc    579449 Jan 13 01:14 pilot3.tar.gz
[2026-01-13 07:01:53] -rw-r--r-- 1 boinc boinc      5112 Jan 13 01:21 queuedata.json
[2026-01-13 07:01:53] -rwx------ 1 boinc boinc     36322 Jan 13 01:24 runpilot2-wrapper.sh
[2026-01-13 07:01:53] -rw-r--r-- 1 boinc boinc       100 Jan 13 05:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 07:01:53] -rwxr-xr-x 1 boinc boinc      7986 Jan 13 05:04 run_atlas
[2026-01-13 07:01:53] -rw-r--r-- 1 boinc boinc       105 Jan 13 05:04 job.xml
[2026-01-13 07:01:53] -rw-r--r-- 2 boinc boinc 353649067 Jan 13 05:04 EVNT.48188671._000001.pool.root.1
[2026-01-13 07:01:53] drwxrwx--x 2 boinc boinc      4096 Jan 13 05:04 shared
[2026-01-13 07:01:53] -rw-r--r-- 2 boinc boinc    592410 Jan 13 05:04 input.tar.gz
[2026-01-13 07:01:53] -rw-r--r-- 2 boinc boinc     15847 Jan 13 05:04 start_atlas.sh
[2026-01-13 07:01:53] -rw-r--r-- 1 boinc boinc         0 Jan 13 05:04 boinc_setup_complete
[2026-01-13 07:01:53] -rw-r--r-- 1 boinc boinc      6448 Jan 13 05:04 init_data.xml
[2026-01-13 07:01:53] -rw-r--r-- 1 boinc boinc         0 Jan 13 05:04 boinc_lockfile
[2026-01-13 07:01:53] -rw-r--r-- 1 boinc boinc      2622 Jan 13 05:04 pandaJob.out
[2026-01-13 07:01:53] -rw------- 1 boinc boinc    987763 Jan 13 05:04 agis_schedconf.cvmfs.json
[2026-01-13 07:01:53] -rw------- 1 boinc boinc   1516240 Jan 13 05:04 agis_ddmendpoints.agis.ALL.json
[2026-01-13 07:01:53] drwx------ 5 boinc boinc      4096 Jan 13 05:04 pilot3
[2026-01-13 07:01:53] -rw------- 1 boinc boinc 289960643 Jan 13 07:00 HITS.48188673._000020.pool.root.1
[2026-01-13 07:01:53] -rw------- 1 boinc boinc        95 Jan 13 07:00 pilot_heartbeat.json
[2026-01-13 07:01:53] -rw-r--r-- 1 boinc boinc       530 Jan 13 07:00 boinc_task_state.xml
[2026-01-13 07:01:53] -rw------- 1 boinc boinc      1022 Jan 13 07:01 memory_monitor_summary.json
[2026-01-13 07:01:53] -rw------- 1 boinc boinc    398247 Jan 13 07:01 log.48188673._000020.job.log.tgz.1
[2026-01-13 07:01:53] -rw------- 1 boinc boinc      7748 Jan 13 07:01 heartbeat.json
[2026-01-13 07:01:53] -rw-r--r-- 1 boinc boinc        27 Jan 13 07:01 wrapper_checkpoint.txt
[2026-01-13 07:01:53] -rw-r--r-- 1 boinc boinc      8192 Jan 13 07:01 boinc_mmap_file
[2026-01-13 07:01:53] -rw------- 1 boinc boinc       747 Jan 13 07:01 pilotlog.txt
[2026-01-13 07:01:53] -rw------- 1 boinc boinc   1011251 Jan 13 07:01 log.48188673._000020.job.log.1
[2026-01-13 07:01:53] -rw------- 1 boinc boinc       357 Jan 13 07:01 output.list
[2026-01-13 07:01:53] -rw-r--r-- 1 boinc boinc       620 Jan 13 07:01 runtime_log
[2026-01-13 07:01:53] -rw------- 1 boinc boinc   1433600 Jan 13 07:01 result.tar.gz
[2026-01-13 07:01:53] -rw-r--r-- 1 boinc boinc      8912 Jan 13 07:01 runtime_log.err
[2026-01-13 07:01:53] -rw------- 1 boinc boinc       662 Jan 13 07:01 mx1NDm3Nhz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJsnKDm8DSgYn.diag
[2026-01-13 07:01:53] -rw-r--r-- 1 boinc boinc      6962 Jan 13 07:01 stderr.txt
[2026-01-13 07:01:53] HITS file was successfully produced:
[2026-01-13 07:01:53] -rw------- 1 boinc boinc 289960643 Jan 13 07:00 shared/HITS.pool.root.1
[2026-01-13 07:01:53]  *** Contents of shared directory: ***
[2026-01-13 07:01:53] total 630536
[2026-01-13 07:01:53] -rw-r--r-- 2 boinc boinc 353649067 Jan 13 05:04 ATLAS.root_0
[2026-01-13 07:01:53] -rw-r--r-- 2 boinc boinc    592410 Jan 13 05:04 input.tar.gz
[2026-01-13 07:01:53] -rw-r--r-- 2 boinc boinc     15847 Jan 13 05:04 start_atlas.sh
[2026-01-13 07:01:53] -rw------- 1 boinc boinc 289960643 Jan 13 07:00 HITS.pool.root.1
[2026-01-13 07:01:53] -rw------- 1 boinc boinc   1433600 Jan 13 07:01 result.tar.gz
07:01:54 (3419859): run_atlas exited; CPU time 20291.453815
07:01:54 (3419859): called boinc_finish(0)

</stderr_txt>
]]>

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