Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:58:05 (3537010): wrapper (7.7.26015): starting
18:58:05 (3537010): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 18:58:05] Arguments: --nthreads 8
[2026-01-12 18:58:05] Threads: 8
[2026-01-12 18:58:05] Checking for CVMFS
[2026-01-12 18:58:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 18:58:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 18:58:06] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 18:58:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 18:58:07] 2.13.3.0 7100 98357 182320 155070 0 554 40787651 40960001 40348 16776704 0 1088779833 99.694 833859259 49175 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 18:58:07] CVMFS is ok
[2026-01-12 18:58:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 18:58:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 18:58:07] Further information can be found at the LHC@home message board.
[2026-01-12 18:58:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 18:58:07] Checking for apptainer binary...
[2026-01-12 18:58:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 18:58:07] Running /usr/bin/apptainer --version
[2026-01-12 18:58:07] apptainer version 1.4.5-2.el9
[2026-01-12 18:58:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 18:58:08] c8-6-10.aglt2.org
[2026-01-12 18:58:08] apptainer works
[2026-01-12 18:58:08] Set ATHENA_PROC_NUMBER=8
[2026-01-12 18:58:08] Set ATHENA_CORE_NUMBER=8
[2026-01-12 18:58:08] Starting ATLAS job with PandaID=6967681834
[2026-01-12 18:58:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 22:45:58]  *** The last 200 lines of the pilot log: ***
[2026-01-12 22:45:58] 2026-01-13 03:45:10,517 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6967681834/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 22:45:58] 2026-01-13 03:45:10,517 | INFO     | extracted standard info from prmon json
[2026-01-12 22:45:58] 2026-01-13 03:45:10,517 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 22:45:58] 2026-01-13 03:45:10,517 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 22:45:58] 2026-01-13 03:45:10,524 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 22:45:58] 2026-01-13 03:45:10,524 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 22:45:58] 2026-01-13 03:45:10,549 | INFO     | fitting pss+swap vs Time
[2026-01-12 22:45:58] 2026-01-13 03:45:10,550 | INFO     | sum of square deviations: 3256863569.9269376
[2026-01-12 22:45:58] 2026-01-13 03:45:10,551 | INFO     | sum of deviations: 91211245234.48402
[2026-01-12 22:45:58] 2026-01-13 03:45:10,551 | INFO     | mean x: 1768269170.0182648
[2026-01-12 22:45:58] 2026-01-13 03:45:10,551 | INFO     | mean y: 2486637.378995434
[2026-01-12 22:45:58] 2026-01-13 03:45:10,551 | INFO     | intersect: -49519401352.154335
[2026-01-12 22:45:58] 2026-01-13 03:45:10,551 | INFO     | chi2: 5.158515197493926
[2026-01-12 22:45:58] 2026-01-13 03:45:10,551 | INFO     | sum of square deviations: 3038842097.425225
[2026-01-12 22:45:58] 2026-01-13 03:45:10,552 | INFO     | sum of deviations: 102734522579.47191
[2026-01-12 22:45:58] 2026-01-13 03:45:10,552 | INFO     | mean x: 1768269017.5186915
[2026-01-12 22:45:58] 2026-01-13 03:45:10,552 | INFO     | mean y: 2494514.2570093456
[2026-01-12 22:45:58] 2026-01-13 03:45:10,552 | INFO     | intersect: -59777601812.81931
[2026-01-12 22:45:58] 2026-01-13 03:45:10,552 | INFO     | chi2: 4.49323242493209
[2026-01-12 22:45:58] 2026-01-13 03:45:10,552 | INFO     | current chi2=4.49323242493209 (change=12.896788069656912 %)
[2026-01-12 22:45:58] 2026-01-13 03:45:10,552 | INFO     | right removable region: 213
[2026-01-12 22:45:58] 2026-01-13 03:45:10,552 | INFO     | sum of square deviations: 3038839657.425225
[2026-01-12 22:45:58] 2026-01-13 03:45:10,557 | INFO     | sum of deviations: 18078488667.8785
[2026-01-12 22:45:58] 2026-01-13 03:45:10,557 | INFO     | mean x: 1768269322.5186915
[2026-01-12 22:45:58] 2026-01-13 03:45:10,557 | INFO     | mean y: 2537719.2803738317
[2026-01-12 22:45:58] 2026-01-13 03:45:10,557 | INFO     | intersect: -10517147592.447191
[2026-01-12 22:45:58] 2026-01-13 03:45:10,558 | INFO     | chi2: 0.9922723283713044
[2026-01-12 22:45:58] 2026-01-13 03:45:10,558 | INFO     | current chi2=0.9922723283713044 (change=80.76438102085338 %)
[2026-01-12 22:45:58] 2026-01-13 03:45:10,558 | INFO     | sum of square deviations: 2830769419.923432
[2026-01-12 22:45:58] 2026-01-13 03:45:10,558 | INFO     | sum of deviations: -384876510.612442
[2026-01-12 22:45:58] 2026-01-13 03:45:10,559 | INFO     | mean x: 1768269475.0191388
[2026-01-12 22:45:58] 2026-01-13 03:45:10,559 | INFO     | mean y: 2551180.153110048
[2026-01-12 22:45:58] 2026-01-13 03:45:10,559 | INFO     | intersect: 242968283.91929004
[2026-01-12 22:45:58] 2026-01-13 03:45:10,559 | INFO     | chi2: 0.7162326661050826
[2026-01-12 22:45:58] 2026-01-13 03:45:10,559 | INFO     | current chi2=0.7162326661050826 (change=27.818941874485976 %)
[2026-01-12 22:45:58] 2026-01-13 03:45:10,559 | INFO     | sum of square deviations: 2632420294.9215846
[2026-01-12 22:45:58] 2026-01-13 03:45:10,560 | INFO     | sum of deviations: -1846443070.0686264
[2026-01-12 22:45:58] 2026-01-13 03:45:10,560 | INFO     | mean x: 1768269627.5196078
[2026-01-12 22:45:58] 2026-01-13 03:45:10,560 | INFO     | mean y: 2552309.1421568627
[2026-01-12 22:45:58] 2026-01-13 03:45:10,560 | INFO     | intersect: 1242859263.941588
[2026-01-12 22:45:58] 2026-01-13 03:45:10,560 | INFO     | chi2: 0.7149672308281797
[2026-01-12 22:45:58] 2026-01-13 03:45:10,560 | INFO     | current chi2=0.7149672308281797 (change=0.1766793580896612 %)
[2026-01-12 22:45:58] 2026-01-13 03:45:10,560 | INFO     | left removable region: 30
[2026-01-12 22:45:58] 2026-01-13 03:45:10,560 | INFO     | sum of square deviations: 1900262975.9125717
[2026-01-12 22:45:58] 2026-01-13 03:45:10,576 | INFO     | sum of deviations: 6826422400.010931
[2026-01-12 22:45:58] 2026-01-13 03:45:10,576 | INFO     | mean x: 1768269902.021858
[2026-01-12 22:45:58] 2026-01-13 03:45:10,576 | INFO     | mean y: 2565897.4972677594
[2026-01-12 22:45:58] 2026-01-13 03:45:10,576 | INFO     | intersect: -6349690301.479749
[2026-01-12 22:45:58] 2026-01-13 03:45:10,576 | INFO     | chi2: 0.0004430343015499362
[2026-01-12 22:45:58] 2026-01-13 03:45:10,577 | INFO     | current memory leak: 3.59 B/s (using 183 data points, chi2=0.00)
[2026-01-12 22:45:58] 2026-01-13 03:45:10,577 | INFO     | could have reported an average CPU frequency of 3799 MHz (11 samples)
[2026-01-12 22:45:58] 2026-01-13 03:45:10,577 | INFO     | ..............................
[2026-01-12 22:45:58] 2026-01-13 03:45:10,577 | INFO     | . Timing measurements:
[2026-01-12 22:45:58] 2026-01-13 03:45:10,577 | INFO     | . get job = 0 s
[2026-01-12 22:45:58] 2026-01-13 03:45:10,577 | INFO     | . initial setup = 6 s
[2026-01-12 22:45:58] 2026-01-13 03:45:10,577 | INFO     | . payload setup = 50 s
[2026-01-12 22:45:58] 2026-01-13 03:45:10,577 | INFO     | . stage-in = 0 s
[2026-01-12 22:45:58] 2026-01-13 03:45:10,577 | INFO     | . payload execution = 13383 s
[2026-01-12 22:45:58] 2026-01-13 03:45:10,577 | INFO     | . stage-out = 4 s
[2026-01-12 22:45:58] 2026-01-13 03:45:10,577 | INFO     | . log creation = 0 s
[2026-01-12 22:45:58] 2026-01-13 03:45:10,577 | INFO     | ..............................
[2026-01-12 22:45:58] 2026-01-13 03:45:10,792 | INFO     | 
[2026-01-12 22:45:58] 2026-01-13 03:45:10,792 | INFO     | job summary report
[2026-01-12 22:45:58] 2026-01-13 03:45:10,792 | INFO     | --------------------------------------------------
[2026-01-12 22:45:58] 2026-01-13 03:45:10,792 | INFO     | PanDA job id: 6967681834
[2026-01-12 22:45:58] 2026-01-13 03:45:10,792 | INFO     | task id: 48188598
[2026-01-12 22:45:58] 2026-01-13 03:45:10,792 | INFO     | errors: (none)
[2026-01-12 22:45:58] 2026-01-13 03:45:10,792 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 22:45:58] 2026-01-13 03:45:10,792 | INFO     | pilot state: finished 
[2026-01-12 22:45:58] 2026-01-13 03:45:10,792 | INFO     | transexitcode: 0
[2026-01-12 22:45:58] 2026-01-13 03:45:10,792 | INFO     | exeerrorcode: 0
[2026-01-12 22:45:58] 2026-01-13 03:45:10,792 | INFO     | exeerrordiag: 
[2026-01-12 22:45:58] 2026-01-13 03:45:10,792 | INFO     | exitcode: 0
[2026-01-12 22:45:58] 2026-01-13 03:45:10,792 | INFO     | exitmsg: OK
[2026-01-12 22:45:58] 2026-01-13 03:45:10,792 | INFO     | cpuconsumptiontime: 33016 s
[2026-01-12 22:45:58] 2026-01-13 03:45:10,793 | INFO     | nevents: 400
[2026-01-12 22:45:58] 2026-01-13 03:45:10,793 | INFO     | neventsw: 0
[2026-01-12 22:45:58] 2026-01-13 03:45:10,793 | INFO     | pid: 3571672
[2026-01-12 22:45:58] 2026-01-13 03:45:10,793 | INFO     | pgrp: 3571672
[2026-01-12 22:45:58] 2026-01-13 03:45:10,793 | INFO     | corecount: 8
[2026-01-12 22:45:58] 2026-01-13 03:45:10,793 | INFO     | event service: False
[2026-01-12 22:45:58] 2026-01-13 03:45:10,793 | INFO     | sizes: {0: 2283894, 1: 2284149, 12: 2284149, 23: 2284177, 31: 2284467, 34: 2284495, 13438: 2314836, 13443: 2323834, 13444: 2323890, 13479: 2324084}
[2026-01-12 22:45:58] 2026-01-13 03:45:10,793 | INFO     | --------------------------------------------------
[2026-01-12 22:45:58] 2026-01-13 03:45:10,793 | INFO     | 
[2026-01-12 22:45:58] 2026-01-13 03:45:10,793 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-12 22:45:58] 2026-01-13 03:45:10,838 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 22:45:58] 2026-01-13 03:45:10,838 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 22:45:58] 2026-01-13 03:45:10,838 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 22:45:58] 2026-01-13 03:45:10,838 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 22:45:58] 2026-01-13 03:45:10,838 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 22:45:58] 2026-01-13 03:45:10,838 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 22:45:58] 2026-01-13 03:45:10,838 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 22:45:58] 2026-01-13 03:45:10,838 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 22:45:58] 2026-01-13 03:45:10,838 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 22:45:58] 2026-01-13 03:45:10,838 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 22:45:58] 2026-01-13 03:45:10,839 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 22:45:58] 2026-01-13 03:45:10,839 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 22:45:58] 2026-01-13 03:45:10,839 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 22:45:58] 2026-01-13 03:45:10,839 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 22:45:58] 2026-01-13 03:45:10,839 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 22:45:58] 2026-01-13 03:45:10,839 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 22:45:58] 2026-01-13 03:45:10,839 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 22:45:58] 2026-01-13 03:45:10,839 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 22:45:58] 2026-01-13 03:45:10,839 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 22:45:58] 2026-01-13 03:45:10,839 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 22:45:58] 2026-01-13 03:45:10,839 | INFO     | job 6967681834 has completed (purged errors)
[2026-01-12 22:45:58] 2026-01-13 03:45:10,839 | INFO     | overall cleanup function is called
[2026-01-12 22:45:58] 2026-01-13 03:45:11,848 | INFO     | --- collectZombieJob: --- 10, [3571672]
[2026-01-12 22:45:58] 2026-01-13 03:45:11,848 | INFO     | zombie collector waiting for pid 3571672
[2026-01-12 22:45:58] 2026-01-13 03:45:11,848 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 22:45:58] 2026-01-13 03:45:11,848 | INFO     | collected zombie processes
[2026-01-12 22:45:58] 2026-01-13 03:45:11,848 | INFO     | will attempt to kill all subprocesses of pid=3571672
[2026-01-12 22:45:58] 2026-01-13 03:45:15,335 | INFO     | PID=3545032 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 22:45:58] 2026-01-13 03:45:15,336 | INFO     | .. there are 37 such processes running
[2026-01-12 22:45:58] 2026-01-13 03:45:15,353 | INFO     | process IDs to be killed: [3571672] (in reverse order)
[2026-01-12 22:45:58] 2026-01-13 03:45:15,966 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 22:45:58] 2026-01-13 03:45:15,968 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 22:45:58] 2026-01-13 03:45:16,106 | INFO     | did not find any defunct processes belonging to 3571672
[2026-01-12 22:45:58] 2026-01-13 03:45:16,261 | INFO     | did not find any defunct processes belonging to 3571672
[2026-01-12 22:45:58] 2026-01-13 03:45:16,262 | INFO     | ready for new job
[2026-01-12 22:45:58] 2026-01-13 03:45:16,262 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 22:45:58] 2026-01-13 03:45:16,263 | INFO     | ***************************************
[2026-01-12 22:45:58] 2026-01-13 03:45:16,263 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 22:45:58] 2026-01-13 03:45:16,263 | INFO     | ***************************************
[2026-01-12 22:45:58] 2026-01-13 03:45:16,263 | INFO     | 
[2026-01-12 22:45:58] 2026-01-13 03:45:16,328 | INFO     | architecture information:
[2026-01-12 22:45:58] 2026-01-13 03:45:16,342 | INFO     | executing command: cat /etc/os-release
[2026-01-12 22:45:58] 2026-01-13 03:45:16,486 | INFO     | cat /etc/os-release:
[2026-01-12 22:45:58] NAME="CentOS Linux"
[2026-01-12 22:45:58] VERSION="7 (Core)"
[2026-01-12 22:45:58] ID="centos"
[2026-01-12 22:45:58] ID_LIKE="rhel fedora"
[2026-01-12 22:45:58] VERSION_ID="7"
[2026-01-12 22:45:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 22:45:58] ANSI_COLOR="0;31"
[2026-01-12 22:45:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 22:45:58] HOME_URL="https://www.centos.org/"
[2026-01-12 22:45:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 22:45:58] 
[2026-01-12 22:45:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 22:45:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 22:45:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 22:45:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 22:45:58] 
[2026-01-12 22:45:58] 2026-01-13 03:45:16,486 | INFO     | ***************************************
[2026-01-12 22:45:58] 2026-01-13 03:45:17,002 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-12 22:45:58] 2026-01-13 03:45:17,042 | INFO     | sufficient remaining disk space (171456856064 B)
[2026-01-12 22:45:58] 2026-01-13 03:45:17,046 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 22:45:58] 2026-01-13 03:45:17,046 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 22:45:58] 2026-01-13 03:45:17,046 | INFO     | update_server=False
[2026-01-12 22:45:58] 2026-01-13 03:45:17,046 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 22:45:58] 2026-01-13 03:45:17,100 | INFO     | all data control threads have been joined
[2026-01-12 22:45:58] 2026-01-13 03:45:17,317 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-12 22:45:58] 2026-01-13 03:45:17,317 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-12 22:45:58] 2026-01-13 03:45:17,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 22:45:58] 2026-01-13 03:45:17,317 | INFO     | will abort loop
[2026-01-12 22:45:58] 2026-01-13 03:45:17,945 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 22:45:58] 2026-01-13 03:45:17,958 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 22:45:58] 2026-01-13 03:45:18,066 | INFO     | [job] retrieve thread has finished
[2026-01-12 22:45:58] 2026-01-13 03:45:18,106 | INFO     | [data] control thread has finished
[2026-01-12 22:45:58] 2026-01-13 03:45:18,110 | INFO     | [data] copytool_in thread has finished
[2026-01-12 22:45:58] 2026-01-13 03:45:18,325 | INFO     | [job] job monitor thread has finished
[2026-01-12 22:45:58] 2026-01-13 03:45:18,471 | INFO     | all job control threads have been joined
[2026-01-12 22:45:58] 2026-01-13 03:45:18,540 | INFO     | all payload control threads have been joined
[2026-01-12 22:45:58] 2026-01-13 03:45:18,690 | INFO     | [job] validate thread has finished
[2026-01-12 22:45:58] 2026-01-13 03:45:18,723 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 22:45:58] 2026-01-13 03:45:18,888 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 22:45:58] 2026-01-13 03:45:19,136 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 22:45:58] 2026-01-13 03:45:19,137 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 22:45:58] 2026-01-13 03:45:19,372 | INFO     | [payload] failed_post thread has finished
[2026-01-12 22:45:58] 2026-01-13 03:45:19,372 | INFO     | [payload] validate_post thread has finished
[2026-01-12 22:45:58] 2026-01-13 03:45:19,477 | INFO     | [job] control thread has finished
[2026-01-12 22:45:58] 2026-01-13 03:45:19,546 | INFO     | [payload] control thread has finished
[2026-01-12 22:45:58] 2026-01-13 03:45:19,815 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 22:45:58] 2026-01-13 03:45:19,971 | INFO     | [data] copytool_out thread has finished
[2026-01-12 22:45:58] 2026-01-13 03:45:20,821 | INFO     | [job] queue monitor thread has finished
[2026-01-12 22:45:58] 2026-01-13 03:45:21,967 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 22:45:58] 2026-01-13 03:45:48,469 | INFO     | PID=3545032 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 22:45:58] 2026-01-13 03:45:48,470 | INFO     | .. there are 37 such processes running
[2026-01-12 22:45:58] 2026-01-13 03:45:48,470 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 22:45:58] 2026-01-13 03:45:48,470 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 22:45:58] 2026-01-13 03:45:48,470 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 22:45:58] 2026-01-13 03:45:50,322 | INFO     | [monitor] cgroup control has ended
[2026-01-12 22:45:58] 2026-01-13 03:45:51,772 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139860574738240)>', '<ExcThread(monitor, started 139860056708864)>']
[2026-01-12 22:45:58] 2026-01-13 03:45:52,494 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 22:45:58] 2026-01-13 03:45:52,494 | INFO     | [monitor] control thread has ended
[2026-01-12 22:45:58] 2026-01-13 03:45:56,800 | INFO     | all workflow threads have been joined
[2026-01-12 22:45:58] 2026-01-13 03:45:56,800 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 22:45:58] 2026-01-13 03:45:56,800 | INFO     | traces error code: 0
[2026-01-12 22:45:58] 2026-01-13 03:45:56,800 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 22:45:58] 2026-01-13 03:45:57,057 [wrapper] ==== pilot stdout END ====
[2026-01-12 22:45:58] 2026-01-13 03:45:57,060 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 22:45:58] 2026-01-13 03:45:57,078 [wrapper] pilotpid: 3545032
[2026-01-12 22:45:58] 2026-01-13 03:45:57,105 [wrapper] Pilot exit status: 0
[2026-01-12 22:45:58] 2026-01-13 03:45:57,174 [wrapper] pandaids: 6967681834
[2026-01-12 22:45:58] 2026-01-13 03:45:57,750 [wrapper] cleanup supervisor_pilot  849052 3545033
[2026-01-12 22:45:58] 2026-01-13 03:45:57,765 [wrapper] Test setup, not cleaning
[2026-01-12 22:45:58] 2026-01-13 03:45:57,785 [wrapper] apfmon messages muted
[2026-01-12 22:45:58] 2026-01-13 03:45:57,802 [wrapper] ==== wrapper stdout END ====
[2026-01-12 22:45:58] 2026-01-13 03:45:57,826 [wrapper] ==== wrapper stderr END ====
[2026-01-12 22:45:58]  *** Error codes and diagnostics ***
[2026-01-12 22:45:58]     "exeErrorCode": 0,
[2026-01-12 22:45:58]     "exeErrorDiag": "",
[2026-01-12 22:45:58]     "pilotErrorCode": 0,
[2026-01-12 22:45:58]     "pilotErrorDiag": "",
[2026-01-12 22:45:58]  *** Listing of results directory ***
[2026-01-12 22:45:58] total 635432
[2026-01-12 22:45:58] -rw-r--r--. 1 boincer umatlas    579449 Jan 12 15:16 pilot3.tar.gz
[2026-01-12 22:45:58] -rwx------. 1 boincer umatlas     36322 Jan 12 15:41 runpilot2-wrapper.sh
[2026-01-12 22:45:58] -rw-r--r--. 1 boincer umatlas      5112 Jan 12 15:41 queuedata.json
[2026-01-12 22:45:58] -rw-r--r--. 1 boincer umatlas       100 Jan 12 18:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 22:45:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 12 18:58 run_atlas
[2026-01-12 22:45:58] -rw-r--r--. 1 boincer umatlas       105 Jan 12 18:58 job.xml
[2026-01-12 22:45:58] -rw-r--r--. 2 boincer umatlas 349143069 Jan 12 18:58 EVNT.48188594._000001.pool.root.1
[2026-01-12 22:45:58] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 18:58 start_atlas.sh
[2026-01-12 22:45:58] drwxrwx--x. 2 boincer umatlas      4096 Jan 12 18:58 shared
[2026-01-12 22:45:58] -rw-r--r--. 2 boincer umatlas    592398 Jan 12 18:58 input.tar.gz
[2026-01-12 22:45:58] -rw-r--r--. 1 boincer umatlas         0 Jan 12 18:58 boinc_lockfile
[2026-01-12 22:45:58] -rw-r--r--. 1 boincer umatlas      2628 Jan 12 18:58 pandaJob.out
[2026-01-12 22:45:58] -rw-------. 1 boincer umatlas        57 Jan 12 18:58 setup.sh.local
[2026-01-12 22:45:58] -rw-------. 1 boincer umatlas    988531 Jan 12 18:59 agis_schedconf.cvmfs.json
[2026-01-12 22:45:58] drwx------. 5 boincer umatlas      4096 Jan 12 18:59 pilot3
[2026-01-12 22:45:58] -rw-r--r--. 1 boincer umatlas      7171 Jan 12 22:37 init_data.xml
[2026-01-12 22:45:58] -rw-------. 1 boincer umatlas 293033068 Jan 12 22:43 HITS.48188598._000010.pool.root.1
[2026-01-12 22:45:58] -rw-r--r--. 1 boincer umatlas       531 Jan 12 22:43 boinc_task_state.xml
[2026-01-12 22:45:58] -rw-------. 1 boincer umatlas      1047 Jan 12 22:44 memory_monitor_summary.json
[2026-01-12 22:45:58] -rw-------. 1 boincer umatlas   1516240 Jan 12 22:44 agis_ddmendpoints.agis.ALL.json
[2026-01-12 22:45:58] -rw-------. 1 boincer umatlas    550011 Jan 12 22:44 log.48188598._000010.job.log.tgz.1
[2026-01-12 22:45:58] -rw-------. 1 boincer umatlas        95 Jan 12 22:44 pilot_heartbeat.json
[2026-01-12 22:45:58] -rw-------. 1 boincer umatlas      7787 Jan 12 22:45 heartbeat.json
[2026-01-12 22:45:58] -rw-r--r--. 1 boincer umatlas      8192 Jan 12 22:45 boinc_mmap_file
[2026-01-12 22:45:58] -rw-r--r--. 1 boincer umatlas        28 Jan 12 22:45 wrapper_checkpoint.txt
[2026-01-12 22:45:58] -rw-------. 1 boincer umatlas      5011 Jan 12 22:45 pilotlog.txt
[2026-01-12 22:45:58] -rw-------. 1 boincer umatlas   1742590 Jan 12 22:45 log.48188598._000010.job.log.1
[2026-01-12 22:45:58] -rw-------. 1 boincer umatlas       357 Jan 12 22:45 output.list
[2026-01-12 22:45:58] -rw-r--r--. 1 boincer umatlas       620 Jan 12 22:45 runtime_log
[2026-01-12 22:45:58] -rw-------. 1 boincer umatlas   2314240 Jan 12 22:45 result.tar.gz
[2026-01-12 22:45:58] -rw-r--r--. 1 boincer umatlas      9338 Jan 12 22:45 runtime_log.err
[2026-01-12 22:45:58] -rw-------. 1 boincer umatlas       659 Jan 12 22:45 IccLDm0tdz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTnnKDmBfdljm.diag
[2026-01-12 22:45:58] -rw-r--r--. 1 boincer umatlas     21290 Jan 12 22:45 stderr.txt
[2026-01-12 22:45:58] HITS file was successfully produced:
[2026-01-12 22:45:58] -rw-------. 1 boincer umatlas 293033068 Jan 12 22:43 shared/HITS.pool.root.1
[2026-01-12 22:45:58]  *** Contents of shared directory: ***
[2026-01-12 22:45:58] total 629992
[2026-01-12 22:45:58] -rw-r--r--. 2 boincer umatlas 349143069 Jan 12 18:58 ATLAS.root_0
[2026-01-12 22:45:58] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 18:58 start_atlas.sh
[2026-01-12 22:45:58] -rw-r--r--. 2 boincer umatlas    592398 Jan 12 18:58 input.tar.gz
[2026-01-12 22:45:58] -rw-------. 1 boincer umatlas 293033068 Jan 12 22:43 HITS.pool.root.1
[2026-01-12 22:45:58] -rw-------. 1 boincer umatlas   2314240 Jan 12 22:45 result.tar.gz
22:46:20 (3537010): run_atlas exited; CPU time 33441.905927
22:46:20 (3537010): called boinc_finish(0)

</stderr_txt>
]]>

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