Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:43:12 (26847): wrapper (7.7.26015): starting
02:43:12 (26847): wrapper: running run_atlas (--nthreads 8)
[2026-01-13 02:43:12] Arguments: --nthreads 8
[2026-01-13 02:43:12] Threads: 8
[2026-01-13 02:43:12] Checking for CVMFS
[2026-01-13 02:43:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 02:43:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 02:43:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 02:43:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 02:43:15] 2.11.2.0 29086 40529 103080 155072 0 85 19079119 25165825 96 130560 0 15809744 99.797 10946870 2783 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-13 02:43:15] CVMFS is ok
[2026-01-13 02:43:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 02:43:15] Checking for apptainer binary...
[2026-01-13 02:43:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 02:43:15] Running /usr/bin/apptainer --version
[2026-01-13 02:43:15] apptainer version 1.3.2-1.el7
[2026-01-13 02:43:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 02:43:36] cg-vwn413.simple-grid.lan
[2026-01-13 02:43:36] apptainer works
[2026-01-13 02:43:36] Set ATHENA_PROC_NUMBER=8
[2026-01-13 02:43:36] Set ATHENA_CORE_NUMBER=8
[2026-01-13 02:43:36] Starting ATLAS job with PandaID=6967960830
[2026-01-13 02:43:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 08:31:39]  *** The last 200 lines of the pilot log: ***
[2026-01-13 08:31:39] 2026-01-13 07:30:47,997 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6967960830/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 08:31:39] 2026-01-13 07:30:47,997 | INFO     | extracted standard info from prmon json
[2026-01-13 08:31:39] 2026-01-13 07:30:47,997 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 08:31:39] 2026-01-13 07:30:47,997 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 08:31:39] 2026-01-13 07:30:47,998 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 08:31:39] 2026-01-13 07:30:47,998 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 08:31:39] 2026-01-13 07:30:48,005 | INFO     | fitting pss+swap vs Time
[2026-01-13 08:31:39] 2026-01-13 07:30:48,006 | INFO     | sum of square deviations: 10842205148.0
[2026-01-13 08:31:39] 2026-01-13 07:30:48,009 | INFO     | sum of deviations: 216802600939.0
[2026-01-13 08:31:39] 2026-01-13 07:30:48,010 | INFO     | mean x: 1768279359.0
[2026-01-13 08:31:39] 2026-01-13 07:30:48,010 | INFO     | mean y: 2471348.330275229
[2026-01-13 08:31:39] 2026-01-13 07:30:48,010 | INFO     | intersect: -35356347174.73238
[2026-01-13 08:31:39] 2026-01-13 07:30:48,011 | INFO     | chi2: 9.935647165696762
[2026-01-13 08:31:39] 2026-01-13 07:30:48,018 | INFO     | sum of square deviations: 10352419220.5
[2026-01-13 08:31:39] 2026-01-13 07:30:48,022 | INFO     | sum of deviations: 259408127616.0
[2026-01-13 08:31:39] 2026-01-13 07:30:48,022 | INFO     | mean x: 1768279206.5
[2026-01-13 08:31:39] 2026-01-13 07:30:48,022 | INFO     | mean y: 2484479.204968944
[2026-01-13 08:31:39] 2026-01-13 07:30:48,023 | INFO     | intersect: -44306578773.57902
[2026-01-13 08:31:39] 2026-01-13 07:30:48,023 | INFO     | chi2: 8.33022309321023
[2026-01-13 08:31:39] 2026-01-13 07:30:48,031 | INFO     | current chi2=8.33022309321023 (change=16.15822347264228 %)
[2026-01-13 08:31:39] 2026-01-13 07:30:48,032 | INFO     | right removable region: 321
[2026-01-13 08:31:39] 2026-01-13 07:30:48,032 | INFO     | sum of square deviations: 10352419220.5
[2026-01-13 08:31:39] 2026-01-13 07:30:48,036 | INFO     | sum of deviations: 98805948223.0
[2026-01-13 08:31:39] 2026-01-13 07:30:48,036 | INFO     | mean x: 1768279511.5
[2026-01-13 08:31:39] 2026-01-13 07:30:48,036 | INFO     | mean y: 2508075.118012422
[2026-01-13 08:31:39] 2026-01-13 07:30:48,036 | INFO     | intersect: -16874371631.519516
[2026-01-13 08:31:39] 2026-01-13 07:30:48,037 | INFO     | chi2: 4.883034468787374
[2026-01-13 08:31:39] 2026-01-13 07:30:48,037 | INFO     | current chi2=4.883034468787374 (change=50.85338290145553 %)
[2026-01-13 08:31:39] 2026-01-13 07:30:48,038 | INFO     | sum of square deviations: 9877610318.0
[2026-01-13 08:31:39] 2026-01-13 07:30:48,041 | INFO     | sum of deviations: 7694814866.000004
[2026-01-13 08:31:39] 2026-01-13 07:30:48,041 | INFO     | mean x: 1768279664.0
[2026-01-13 08:31:39] 2026-01-13 07:30:48,041 | INFO     | mean y: 2537316.0347003154
[2026-01-13 08:31:39] 2026-01-13 07:30:48,041 | INFO     | intersect: -1374980545.8511214
[2026-01-13 08:31:39] 2026-01-13 07:30:48,042 | INFO     | chi2: 2.0803850197888867
[2026-01-13 08:31:39] 2026-01-13 07:30:48,042 | INFO     | current chi2=2.0803850197888867 (change=57.39565155464654 %)
[2026-01-13 08:31:39] 2026-01-13 07:30:48,043 | INFO     | sum of square deviations: 9417545878.0
[2026-01-13 08:31:39] 2026-01-13 07:30:48,046 | INFO     | sum of deviations: -16364339063.500004
[2026-01-13 08:31:39] 2026-01-13 07:30:48,046 | INFO     | mean x: 1768279816.5
[2026-01-13 08:31:39] 2026-01-13 07:30:48,046 | INFO     | mean y: 2545237.5865384615
[2026-01-13 08:31:39] 2026-01-13 07:30:48,047 | INFO     | intersect: 3075185482.8491235
[2026-01-13 08:31:39] 2026-01-13 07:30:48,047 | INFO     | chi2: 1.7708730999468327
[2026-01-13 08:31:39] 2026-01-13 07:30:48,047 | INFO     | current chi2=1.7708730999468327 (change=14.877626828588806 %)
[2026-01-13 08:31:39] 2026-01-13 07:30:48,047 | INFO     | left removable region: 30
[2026-01-13 08:31:39] 2026-01-13 07:30:48,048 | INFO     | sum of square deviations: 7641036290.0
[2026-01-13 08:31:39] 2026-01-13 07:30:48,051 | INFO     | sum of deviations: 21975676939.000004
[2026-01-13 08:31:39] 2026-01-13 07:30:48,051 | INFO     | mean x: 1768280091.0
[2026-01-13 08:31:39] 2026-01-13 07:30:48,051 | INFO     | mean y: 2562272.615120275
[2026-01-13 08:31:39] 2026-01-13 07:30:48,051 | INFO     | intersect: -5083024360.226474
[2026-01-13 08:31:39] 2026-01-13 07:30:48,052 | INFO     | chi2: 0.001250961142403068
[2026-01-13 08:31:39] 2026-01-13 07:30:48,052 | INFO     | current memory leak: 2.88 B/s (using 291 data points, chi2=0.00)
[2026-01-13 08:31:39] 2026-01-13 07:30:48,053 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-13 08:31:39] 2026-01-13 07:30:48,053 | INFO     | ..............................
[2026-01-13 08:31:39] 2026-01-13 07:30:48,053 | INFO     | . Timing measurements:
[2026-01-13 08:31:39] 2026-01-13 07:30:48,053 | INFO     | . get job = 0 s
[2026-01-13 08:31:39] 2026-01-13 07:30:48,053 | INFO     | . initial setup = 10 s
[2026-01-13 08:31:39] 2026-01-13 07:30:48,054 | INFO     | . payload setup = 156 s
[2026-01-13 08:31:39] 2026-01-13 07:30:48,054 | INFO     | . stage-in = 0 s
[2026-01-13 08:31:39] 2026-01-13 07:30:48,054 | INFO     | . payload execution = 20079 s
[2026-01-13 08:31:39] 2026-01-13 07:30:48,054 | INFO     | . stage-out = 4 s
[2026-01-13 08:31:39] 2026-01-13 07:30:48,054 | INFO     | . log creation = 1 s
[2026-01-13 08:31:39] 2026-01-13 07:30:48,054 | INFO     | ..............................
[2026-01-13 08:31:39] 2026-01-13 07:30:48,227 | INFO     | 
[2026-01-13 08:31:39] 2026-01-13 07:30:48,227 | INFO     | job summary report
[2026-01-13 08:31:39] 2026-01-13 07:30:48,228 | INFO     | --------------------------------------------------
[2026-01-13 08:31:39] 2026-01-13 07:30:48,228 | INFO     | PanDA job id: 6967960830
[2026-01-13 08:31:39] 2026-01-13 07:30:48,228 | INFO     | task id: 48188665
[2026-01-13 08:31:39] 2026-01-13 07:30:48,228 | INFO     | errors: (none)
[2026-01-13 08:31:39] 2026-01-13 07:30:48,228 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 08:31:39] 2026-01-13 07:30:48,228 | INFO     | pilot state: finished 
[2026-01-13 08:31:39] 2026-01-13 07:30:48,228 | INFO     | transexitcode: 0
[2026-01-13 08:31:39] 2026-01-13 07:30:48,228 | INFO     | exeerrorcode: 0
[2026-01-13 08:31:39] 2026-01-13 07:30:48,228 | INFO     | exeerrordiag: 
[2026-01-13 08:31:39] 2026-01-13 07:30:48,229 | INFO     | exitcode: 0
[2026-01-13 08:31:39] 2026-01-13 07:30:48,229 | INFO     | exitmsg: OK
[2026-01-13 08:31:39] 2026-01-13 07:30:48,229 | INFO     | cpuconsumptiontime: 75066 s
[2026-01-13 08:31:39] 2026-01-13 07:30:48,229 | INFO     | nevents: 400
[2026-01-13 08:31:39] 2026-01-13 07:30:48,229 | INFO     | neventsw: 0
[2026-01-13 08:31:39] 2026-01-13 07:30:48,229 | INFO     | pid: 4687
[2026-01-13 08:31:39] 2026-01-13 07:30:48,229 | INFO     | pgrp: 4687
[2026-01-13 08:31:39] 2026-01-13 07:30:48,229 | INFO     | corecount: 8
[2026-01-13 08:31:39] 2026-01-13 07:30:48,229 | INFO     | event service: False
[2026-01-13 08:31:39] 2026-01-13 07:30:48,230 | INFO     | sizes: {0: 2284122, 1: 2284122, 12: 2284150, 23: 2284178, 33: 2284206, 44: 2284262, 55: 2284418, 66: 2284446, 76: 2284474, 87: 2284530, 98: 2284558, 108: 2285128, 
[2026-01-13 08:31:39] 2026-01-13 07:30:48,230 | INFO     | --------------------------------------------------
[2026-01-13 08:31:39] 2026-01-13 07:30:48,230 | INFO     | 
[2026-01-13 08:31:39] 2026-01-13 07:30:48,230 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-01-13 08:31:39] 2026-01-13 07:30:48,787 | INFO     | time since job start (20575s) is within the limit (349056.0s)
[2026-01-13 08:31:39] 2026-01-13 07:30:48,795 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 08:31:39] 2026-01-13 07:30:48,795 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 08:31:39] 2026-01-13 07:30:48,795 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 08:31:39] 2026-01-13 07:30:48,795 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 08:31:39] 2026-01-13 07:30:48,795 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 08:31:39] 2026-01-13 07:30:48,796 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 08:31:39] 2026-01-13 07:30:48,796 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 08:31:39] 2026-01-13 07:30:48,796 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 08:31:39] 2026-01-13 07:30:48,796 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 08:31:39] 2026-01-13 07:30:48,796 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 08:31:39] 2026-01-13 07:30:48,796 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 08:31:39] 2026-01-13 07:30:48,796 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 08:31:39] 2026-01-13 07:30:48,796 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 08:31:39] 2026-01-13 07:30:48,796 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 08:31:39] 2026-01-13 07:30:48,797 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 08:31:39] 2026-01-13 07:30:48,797 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 08:31:39] 2026-01-13 07:30:48,797 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 08:31:39] 2026-01-13 07:30:48,797 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 08:31:39] 2026-01-13 07:30:48,797 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 08:31:39] 2026-01-13 07:30:48,797 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 08:31:39] 2026-01-13 07:30:48,797 | INFO     | job 6967960830 has completed (purged errors)
[2026-01-13 08:31:39] 2026-01-13 07:30:48,798 | INFO     | overall cleanup function is called
[2026-01-13 08:31:39] 2026-01-13 07:30:49,806 | INFO     | --- collectZombieJob: --- 10, [4687]
[2026-01-13 08:31:39] 2026-01-13 07:30:49,807 | INFO     | zombie collector waiting for pid 4687
[2026-01-13 08:31:39] 2026-01-13 07:30:49,807 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 08:31:39] 2026-01-13 07:30:49,807 | INFO     | collected zombie processes
[2026-01-13 08:31:39] 2026-01-13 07:30:49,807 | INFO     | will attempt to kill all subprocesses of pid=4687
[2026-01-13 08:31:39] 2026-01-13 07:30:49,893 | INFO     | process IDs to be killed: [4687] (in reverse order)
[2026-01-13 08:31:39] 2026-01-13 07:30:50,897 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 08:31:39] 2026-01-13 07:30:50,897 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 08:31:39] 2026-01-13 07:30:50,900 | INFO     | did not find any defunct processes belonging to 4687
[2026-01-13 08:31:39] 2026-01-13 07:30:50,901 | INFO     | did not find any defunct processes belonging to 4687
[2026-01-13 08:31:39] 2026-01-13 07:30:50,902 | INFO     | ready for new job
[2026-01-13 08:31:39] 2026-01-13 07:30:50,902 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 08:31:39] 2026-01-13 07:30:50,904 | INFO     | ***************************************
[2026-01-13 08:31:39] 2026-01-13 07:30:50,904 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 08:31:39] 2026-01-13 07:30:50,904 | INFO     | ***************************************
[2026-01-13 08:31:39] 2026-01-13 07:30:50,904 | INFO     | 
[2026-01-13 08:31:39] 2026-01-13 07:30:50,905 | INFO     | pilot is running in a VM
[2026-01-13 08:31:39] 2026-01-13 07:30:50,905 | INFO     | architecture information:
[2026-01-13 08:31:39] 2026-01-13 07:30:50,919 | INFO     | executing command: cat /etc/os-release
[2026-01-13 08:31:39] 2026-01-13 07:30:51,136 | INFO     | cat /etc/os-release:
[2026-01-13 08:31:39] NAME="CentOS Linux"
[2026-01-13 08:31:39] VERSION="7 (Core)"
[2026-01-13 08:31:39] ID="centos"
[2026-01-13 08:31:39] ID_LIKE="rhel fedora"
[2026-01-13 08:31:39] VERSION_ID="7"
[2026-01-13 08:31:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 08:31:39] ANSI_COLOR="0;31"
[2026-01-13 08:31:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 08:31:39] HOME_URL="https://www.centos.org/"
[2026-01-13 08:31:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 08:31:39] 
[2026-01-13 08:31:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 08:31:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 08:31:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 08:31:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 08:31:39] 
[2026-01-13 08:31:39] 2026-01-13 07:30:51,136 | INFO     | ***************************************
[2026-01-13 08:31:39] 2026-01-13 07:30:51,640 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-01-13 08:31:39] 2026-01-13 07:30:51,952 | INFO     | sufficient remaining disk space (495496200192 B)
[2026-01-13 08:31:39] 2026-01-13 07:30:51,952 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 08:31:39] 2026-01-13 07:30:51,952 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 08:31:39] 2026-01-13 07:30:51,953 | INFO     | update_server=False
[2026-01-13 08:31:39] 2026-01-13 07:30:51,953 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 08:31:39] 2026-01-13 07:30:51,954 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 08:31:39] 2026-01-13 07:30:52,037 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-13 08:31:39] 2026-01-13 07:30:52,038 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-13 08:31:39] 2026-01-13 07:30:52,038 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 08:31:39] 2026-01-13 07:30:52,038 | INFO     | will abort loop
[2026-01-13 08:31:39] 2026-01-13 07:30:52,220 | INFO     | all data control threads have been joined
[2026-01-13 08:31:39] 2026-01-13 07:30:52,370 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 08:31:39] 2026-01-13 07:30:52,767 | INFO     | all job control threads have been joined
[2026-01-13 08:31:39] 2026-01-13 07:30:52,959 | INFO     | [job] retrieve thread has finished
[2026-01-13 08:31:39] 2026-01-13 07:30:52,989 | INFO     | [payload] failed_post thread has finished
[2026-01-13 08:31:39] 2026-01-13 07:30:53,044 | INFO     | [job] job monitor thread has finished
[2026-01-13 08:31:39] 2026-01-13 07:30:53,074 | INFO     | all payload control threads have been joined
[2026-01-13 08:31:39] 2026-01-13 07:30:53,137 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 08:31:39] 2026-01-13 07:30:53,138 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 08:31:39] 2026-01-13 07:30:53,226 | INFO     | [data] control thread has finished
[2026-01-13 08:31:39] 2026-01-13 07:30:53,241 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 08:31:39] 2026-01-13 07:30:53,699 | INFO     | [payload] validate_post thread has finished
[2026-01-13 08:31:39] 2026-01-13 07:30:53,773 | INFO     | [job] control thread has finished
[2026-01-13 08:31:39] 2026-01-13 07:30:53,917 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 08:31:39] 2026-01-13 07:30:54,080 | INFO     | [payload] control thread has finished
[2026-01-13 08:31:39] 2026-01-13 07:30:54,145 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 08:31:39] 2026-01-13 07:30:54,247 | INFO     | [job] queue monitor thread has finished
[2026-01-13 08:31:39] 2026-01-13 07:30:54,279 | INFO     | [job] validate thread has finished
[2026-01-13 08:31:39] 2026-01-13 07:30:54,377 | INFO     | [data] copytool_out thread has finished
[2026-01-13 08:31:39] 2026-01-13 07:30:54,427 | INFO     | [data] copytool_in thread has finished
[2026-01-13 08:31:39] 2026-01-13 07:30:55,963 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 08:31:39] 2026-01-13 07:31:21,922 | INFO     | PID=30610 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-13 08:31:39] 2026-01-13 07:31:21,922 | INFO     | .. there are 2 such processes running
[2026-01-13 08:31:39] 2026-01-13 07:31:21,923 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 08:31:39] 2026-01-13 07:31:21,923 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 08:31:39] 2026-01-13 07:31:21,923 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 08:31:39] 2026-01-13 07:31:28,552 | INFO     | [monitor] cgroup control has ended
[2026-01-13 08:31:39] 2026-01-13 07:31:29,023 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139687807301440)>', '<ExcThread(monitor, started 139687580313344)>']
[2026-01-13 08:31:39] 2026-01-13 07:31:29,971 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 08:31:39] 2026-01-13 07:31:29,972 | INFO     | [monitor] control thread has ended
[2026-01-13 08:31:39] 2026-01-13 07:31:34,049 | INFO     | all workflow threads have been joined
[2026-01-13 08:31:39] 2026-01-13 07:31:34,050 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 08:31:39] 2026-01-13 07:31:34,050 | INFO     | traces error code: 0
[2026-01-13 08:31:39] 2026-01-13 07:31:34,050 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 08:31:39] 2026-01-13 07:31:34,429 [wrapper] ==== pilot stdout END ====
[2026-01-13 08:31:39] 2026-01-13 07:31:34,535 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 08:31:39] 2026-01-13 07:31:34,629 [wrapper] pilotpid: 30610
[2026-01-13 08:31:39] 2026-01-13 07:31:34,746 [wrapper] Pilot exit status: 0
[2026-01-13 08:31:39] 2026-01-13 07:31:35,291 [wrapper] pandaids: 6967960830
[2026-01-13 08:31:39] 2026-01-13 07:31:36,326 [wrapper] cleanup supervisor_pilot  2605 30611
[2026-01-13 08:31:39] 2026-01-13 07:31:36,436 [wrapper] Test setup, not cleaning
[2026-01-13 08:31:39] 2026-01-13 07:31:36,539 [wrapper] apfmon messages muted
[2026-01-13 08:31:39] 2026-01-13 07:31:36,614 [wrapper] ==== wrapper stdout END ====
[2026-01-13 08:31:39] 2026-01-13 07:31:36,741 [wrapper] ==== wrapper stderr END ====
[2026-01-13 08:31:39]  *** Error codes and diagnostics ***
[2026-01-13 08:31:39]     "exeErrorCode": 0,
[2026-01-13 08:31:39]     "exeErrorDiag": "",
[2026-01-13 08:31:39]     "pilotErrorCode": 0,
[2026-01-13 08:31:39]     "pilotErrorDiag": "",
[2026-01-13 08:31:39]  *** Listing of results directory ***
[2026-01-13 08:31:39] total 595432
[2026-01-13 08:31:39] -rw-r--r--. 1 boinc boinc    579449 Jan 13 00:27 pilot3.tar.gz
[2026-01-13 08:31:39] -rw-r--r--. 1 boinc boinc      5112 Jan 13 00:40 queuedata.json
[2026-01-13 08:31:39] -rwx------. 1 boinc boinc     36322 Jan 13 00:40 runpilot2-wrapper.sh
[2026-01-13 08:31:39] -rw-r--r--. 1 boinc boinc       100 Jan 13 02:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 08:31:39] -rwxr-xr-x. 1 boinc boinc      7986 Jan 13 02:43 run_atlas
[2026-01-13 08:31:39] -rw-r--r--. 1 boinc boinc       105 Jan 13 02:43 job.xml
[2026-01-13 08:31:39] -rw-r--r--. 1 boinc boinc      6392 Jan 13 02:43 init_data.xml
[2026-01-13 08:31:39] -rw-r--r--. 2 boinc boinc 320391275 Jan 13 02:43 EVNT.48188663._000003.pool.root.1
[2026-01-13 08:31:39] -rw-r--r--. 2 boinc boinc     15847 Jan 13 02:43 start_atlas.sh
[2026-01-13 08:31:39] drwxrwx--x. 2 boinc boinc        68 Jan 13 02:43 shared
[2026-01-13 08:31:39] -rw-r--r--. 2 boinc boinc    592405 Jan 13 02:43 input.tar.gz
[2026-01-13 08:31:39] -rw-r--r--. 1 boinc boinc         0 Jan 13 02:43 boinc_lockfile
[2026-01-13 08:31:39] -rw-r--r--. 1 boinc boinc      2627 Jan 13 02:43 pandaJob.out
[2026-01-13 08:31:39] -rw-------. 1 boinc boinc    987763 Jan 13 02:47 agis_schedconf.cvmfs.json
[2026-01-13 08:31:39] drwx------. 5 boinc boinc      4096 Jan 13 02:47 pilot3
[2026-01-13 08:31:39] -rw-------. 1 boinc boinc 278754266 Jan 13 08:27 HITS.48188665._000071.pool.root.1
[2026-01-13 08:31:39] -rw-r--r--. 1 boinc boinc       531 Jan 13 08:27 boinc_task_state.xml
[2026-01-13 08:31:39] -rw-------. 1 boinc boinc      1012 Jan 13 08:28 memory_monitor_summary.json
[2026-01-13 08:31:39] -rw-------. 1 boinc boinc   1516240 Jan 13 08:28 agis_ddmendpoints.agis.ALL.json
[2026-01-13 08:31:39] -rw-------. 1 boinc boinc    595734 Jan 13 08:28 log.48188665._000071.job.log.tgz.1
[2026-01-13 08:31:39] -rw-------. 1 boinc boinc      7768 Jan 13 08:30 heartbeat.json
[2026-01-13 08:31:39] -rw-------. 1 boinc boinc        95 Jan 13 08:31 pilot_heartbeat.json
[2026-01-13 08:31:39] -rw-r--r--. 1 boinc boinc      8192 Jan 13 08:31 boinc_mmap_file
[2026-01-13 08:31:39] -rw-r--r--. 1 boinc boinc        28 Jan 13 08:31 wrapper_checkpoint.txt
[2026-01-13 08:31:39] -rw-------. 1 boinc boinc      5071 Jan 13 08:31 pilotlog.txt
[2026-01-13 08:31:39] -rw-------. 1 boinc boinc   2741628 Jan 13 08:31 log.48188665._000071.job.log.1
[2026-01-13 08:31:39] -rw-------. 1 boinc boinc       357 Jan 13 08:31 output.list
[2026-01-13 08:31:39] -rw-r--r--. 1 boinc boinc       620 Jan 13 08:31 runtime_log
[2026-01-13 08:31:39] -rw-------. 1 boinc boinc   3358720 Jan 13 08:31 result.tar.gz
[2026-01-13 08:31:39] -rw-r--r--. 1 boinc boinc      8833 Jan 13 08:31 runtime_log.err
[2026-01-13 08:31:39] -rw-------. 1 boinc boinc       657 Jan 13 08:31 NgMKDmuhgz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsqnKDm0YbzPo.diag
[2026-01-13 08:31:39] -rw-r--r--. 1 boinc boinc     20778 Jan 13 08:31 stderr.txt
[2026-01-13 08:31:40] HITS file was successfully produced:
[2026-01-13 08:31:40] -rw-------. 1 boinc boinc 278754266 Jan 13 08:27 shared/HITS.pool.root.1
[2026-01-13 08:31:40]  *** Contents of shared directory: ***
[2026-01-13 08:31:40] total 588984
[2026-01-13 08:31:40] -rw-r--r--. 2 boinc boinc 320391275 Jan 13 02:43 ATLAS.root_0
[2026-01-13 08:31:40] -rw-r--r--. 2 boinc boinc     15847 Jan 13 02:43 start_atlas.sh
[2026-01-13 08:31:40] -rw-r--r--. 2 boinc boinc    592405 Jan 13 02:43 input.tar.gz
[2026-01-13 08:31:40] -rw-------. 1 boinc boinc 278754266 Jan 13 08:27 HITS.pool.root.1
[2026-01-13 08:31:40] -rw-------. 1 boinc boinc   3358720 Jan 13 08:31 result.tar.gz
08:31:41 (26847): run_atlas exited; CPU time 75272.761424
08:31:41 (26847): called boinc_finish(0)

</stderr_txt>
]]>

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