Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:38:49 (989010): wrapper (7.7.26015): starting
18:38:49 (989010): wrapper: running run_atlas (--nthreads 11)
[2026-01-12 18:38:49] Arguments: --nthreads 11
[2026-01-12 18:38:49] Threads: 11
[2026-01-12 18:38:49] Checking for CVMFS
[2026-01-12 18:38:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 18:38:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 18:38:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 18:38:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 18:38:52] 2.13.3.0 8993 19184 155548 155070 3 414 20691330 40960000 36216 16776704 0 62341054 99.873 31015335 46174 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 18:38:52] CVMFS is ok
[2026-01-12 18:38:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 18:38:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 18:38:52] Further information can be found at the LHC@home message board.
[2026-01-12 18:38:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 18:38:52] Checking for apptainer binary...
[2026-01-12 18:38:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 18:38:52] Running /usr/bin/apptainer --version
[2026-01-12 18:38:52] apptainer version 1.4.5-2.el9
[2026-01-12 18:38:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 18:38:53] c-208-40.aglt2.org
[2026-01-12 18:38:53] apptainer works
[2026-01-12 18:38:53] Set ATHENA_PROC_NUMBER=11
[2026-01-12 18:38:53] Set ATHENA_CORE_NUMBER=11
[2026-01-12 18:38:53] Starting ATLAS job with PandaID=6967962042
[2026-01-12 18:38:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 20:42:43]  *** The last 200 lines of the pilot log: ***
[2026-01-12 20:42:43] 2026-01-13 01:41:50,673 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6967962042/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 20:42:43] 2026-01-13 01:41:50,673 | INFO     | extracted standard info from prmon json
[2026-01-12 20:42:43] 2026-01-13 01:41:50,673 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 20:42:43] 2026-01-13 01:41:50,674 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 20:42:43] 2026-01-13 01:41:50,674 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 20:42:43] 2026-01-13 01:41:50,674 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 20:42:43] 2026-01-13 01:41:50,675 | INFO     | fitting pss+swap vs Time
[2026-01-12 20:42:43] 2026-01-13 01:41:50,675 | INFO     | sum of square deviations: 496580880.76922995
[2026-01-12 20:42:43] 2026-01-13 01:41:50,675 | INFO     | sum of deviations: 39233237055.12822
[2026-01-12 20:42:43] 2026-01-13 01:41:50,676 | INFO     | mean x: 1768264923.102564
[2026-01-12 20:42:43] 2026-01-13 01:41:50,676 | INFO     | mean y: 2610463.905982906
[2026-01-12 20:42:43] 2026-01-13 01:41:50,676 | INFO     | intersect: -139702238415.6679
[2026-01-12 20:42:43] 2026-01-13 01:41:50,676 | INFO     | chi2: 7.434653543312989
[2026-01-12 20:42:43] 2026-01-13 01:41:50,676 | INFO     | sum of square deviations: 435597350.7142866
[2026-01-12 20:42:43] 2026-01-13 01:41:50,676 | INFO     | sum of deviations: 45955776472.928566
[2026-01-12 20:42:43] 2026-01-13 01:41:50,676 | INFO     | mean x: 1768264770.607143
[2026-01-12 20:42:43] 2026-01-13 01:41:50,676 | INFO     | mean y: 2626541.339285714
[2026-01-12 20:42:43] 2026-01-13 01:41:50,676 | INFO     | intersect: -186550345853.29047
[2026-01-12 20:42:43] 2026-01-13 01:41:50,676 | INFO     | chi2: 6.777471346344897
[2026-01-12 20:42:43] 2026-01-13 01:41:50,676 | INFO     | current chi2=6.777471346344897 (change=8.8394461576382 %)
[2026-01-12 20:42:43] 2026-01-13 01:41:50,676 | INFO     | right removable region: 111
[2026-01-12 20:42:43] 2026-01-13 01:41:50,677 | INFO     | sum of square deviations: 435590030.7142866
[2026-01-12 20:42:43] 2026-01-13 01:41:50,677 | INFO     | sum of deviations: -2191992861.1428633
[2026-01-12 20:42:43] 2026-01-13 01:41:50,677 | INFO     | mean x: 1768265075.607143
[2026-01-12 20:42:43] 2026-01-13 01:41:50,677 | INFO     | mean y: 2713852.6785714286
[2026-01-12 20:42:43] 2026-01-13 01:41:50,677 | INFO     | intersect: 8901045194.15382
[2026-01-12 20:42:43] 2026-01-13 01:41:50,677 | INFO     | chi2: 2.54067852393626
[2026-01-12 20:42:43] 2026-01-13 01:41:50,677 | INFO     | current chi2=2.54067852393626 (change=65.82653772452593 %)
[2026-01-12 20:42:43] 2026-01-13 01:41:50,677 | INFO     | sum of square deviations: 379808580.6542059
[2026-01-12 20:42:43] 2026-01-13 01:41:50,677 | INFO     | sum of deviations: -23815439738.35514
[2026-01-12 20:42:43] 2026-01-13 01:41:50,677 | INFO     | mean x: 1768265228.1121495
[2026-01-12 20:42:43] 2026-01-13 01:41:50,677 | INFO     | mean y: 2772294.196261682
[2026-01-12 20:42:43] 2026-01-13 01:41:50,677 | INFO     | intersect: 110879714329.04274
[2026-01-12 20:42:43] 2026-01-13 01:41:50,678 | INFO     | chi2: 1.0268230120164465
[2026-01-12 20:42:43] 2026-01-13 01:41:50,678 | INFO     | current chi2=1.0268230120164465 (change=59.58469352409076 %)
[2026-01-12 20:42:43] 2026-01-13 01:41:50,678 | INFO     | sum of square deviations: 329003968.0882351
[2026-01-12 20:42:43] 2026-01-13 01:41:50,678 | INFO     | sum of deviations: -24342687707.58823
[2026-01-12 20:42:43] 2026-01-13 01:41:50,678 | INFO     | mean x: 1768265380.6176472
[2026-01-12 20:42:43] 2026-01-13 01:41:50,678 | INFO     | mean y: 2773556.5490196077
[2026-01-12 20:42:43] 2026-01-13 01:41:50,678 | INFO     | intersect: 130835031278.65355
[2026-01-12 20:42:43] 2026-01-13 01:41:50,678 | INFO     | chi2: 0.9655059145461767
[2026-01-12 20:42:43] 2026-01-13 01:41:50,678 | INFO     | current chi2=0.9655059145461767 (change=5.971535186950767 %)
[2026-01-12 20:42:43] 2026-01-13 01:41:50,678 | INFO     | left removable region: 30
[2026-01-12 20:42:43] 2026-01-13 01:41:50,678 | INFO     | sum of square deviations: 164755639.2098765
[2026-01-12 20:42:43] 2026-01-13 01:41:50,679 | INFO     | sum of deviations: -1260491685.3950608
[2026-01-12 20:42:43] 2026-01-13 01:41:50,679 | INFO     | mean x: 1768265655.0987654
[2026-01-12 20:42:43] 2026-01-13 01:41:50,679 | INFO     | mean y: 2739959.049382716
[2026-01-12 20:42:43] 2026-01-13 01:41:50,679 | INFO     | intersect: 13531164033.094858
[2026-01-12 20:42:43] 2026-01-13 01:41:50,679 | INFO     | chi2: 0.02244372247692913
[2026-01-12 20:42:43] 2026-01-13 01:41:50,679 | INFO     | current memory leak: -7.65 B/s (using 81 data points, chi2=0.02)
[2026-01-12 20:42:43] 2026-01-13 01:41:50,679 | INFO     | could have reported an average CPU frequency of 3800 MHz (7 samples)
[2026-01-12 20:42:43] 2026-01-13 01:41:50,679 | INFO     | ..............................
[2026-01-12 20:42:43] 2026-01-13 01:41:50,679 | INFO     | . Timing measurements:
[2026-01-12 20:42:43] 2026-01-13 01:41:50,679 | INFO     | . get job = 0 s
[2026-01-12 20:42:43] 2026-01-13 01:41:50,679 | INFO     | . initial setup = 9 s
[2026-01-12 20:42:43] 2026-01-13 01:41:50,679 | INFO     | . payload setup = 55 s
[2026-01-12 20:42:43] 2026-01-13 01:41:50,679 | INFO     | . stage-in = 0 s
[2026-01-12 20:42:43] 2026-01-13 01:41:50,679 | INFO     | . payload execution = 7117 s
[2026-01-12 20:42:43] 2026-01-13 01:41:50,679 | INFO     | . stage-out = 2 s
[2026-01-12 20:42:43] 2026-01-13 01:41:50,679 | INFO     | . log creation = 1 s
[2026-01-12 20:42:43] 2026-01-13 01:41:50,679 | INFO     | ..............................
[2026-01-12 20:42:43] 2026-01-13 01:41:50,742 | INFO     | time since job start (7290s) is within the limit (349056.0s)
[2026-01-12 20:42:43] 2026-01-13 01:41:50,859 | INFO     | 
[2026-01-12 20:42:43] 2026-01-13 01:41:50,859 | INFO     | job summary report
[2026-01-12 20:42:43] 2026-01-13 01:41:50,859 | INFO     | --------------------------------------------------
[2026-01-12 20:42:43] 2026-01-13 01:41:50,859 | INFO     | PanDA job id: 6967962042
[2026-01-12 20:42:43] 2026-01-13 01:41:50,859 | INFO     | task id: 48188598
[2026-01-12 20:42:43] 2026-01-13 01:41:50,859 | INFO     | errors: (none)
[2026-01-12 20:42:43] 2026-01-13 01:41:50,859 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 20:42:43] 2026-01-13 01:41:50,859 | INFO     | pilot state: finished 
[2026-01-12 20:42:43] 2026-01-13 01:41:50,860 | INFO     | transexitcode: 0
[2026-01-12 20:42:43] 2026-01-13 01:41:50,860 | INFO     | exeerrorcode: 0
[2026-01-12 20:42:43] 2026-01-13 01:41:50,860 | INFO     | exeerrordiag: 
[2026-01-12 20:42:43] 2026-01-13 01:41:50,860 | INFO     | exitcode: 0
[2026-01-12 20:42:43] 2026-01-13 01:41:50,860 | INFO     | exitmsg: OK
[2026-01-12 20:42:43] 2026-01-13 01:41:50,860 | INFO     | cpuconsumptiontime: 31613 s
[2026-01-12 20:42:43] 2026-01-13 01:41:50,860 | INFO     | nevents: 400
[2026-01-12 20:42:43] 2026-01-13 01:41:50,860 | INFO     | neventsw: 0
[2026-01-12 20:42:43] 2026-01-13 01:41:50,860 | INFO     | pid: 1006251
[2026-01-12 20:42:43] 2026-01-13 01:41:50,860 | INFO     | pgrp: 1006251
[2026-01-12 20:42:43] 2026-01-13 01:41:50,860 | INFO     | corecount: 11
[2026-01-12 20:42:43] 2026-01-13 01:41:50,860 | INFO     | event service: False
[2026-01-12 20:42:43] 2026-01-13 01:41:50,860 | INFO     | sizes: {0: 2284065, 1: 2284093, 12: 2284093, 23: 2284121, 34: 2284439, 44: 2284439, 7176: 2311852, 7180: 2320850, 7183: 2320906, 7212: 2321100}
[2026-01-12 20:42:43] 2026-01-13 01:41:50,860 | INFO     | --------------------------------------------------
[2026-01-12 20:42:43] 2026-01-13 01:41:50,860 | INFO     | 
[2026-01-12 20:42:43] 2026-01-13 01:41:50,860 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-12 20:42:43] 2026-01-13 01:41:50,988 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 20:42:43] 2026-01-13 01:41:50,988 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 20:42:43] 2026-01-13 01:41:50,989 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 20:42:43] 2026-01-13 01:41:50,989 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 20:42:43] 2026-01-13 01:41:50,989 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 20:42:43] 2026-01-13 01:41:50,989 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 20:42:43] 2026-01-13 01:41:50,989 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 20:42:43] 2026-01-13 01:41:50,989 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 20:42:43] 2026-01-13 01:41:50,989 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 20:42:43] 2026-01-13 01:41:50,989 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 20:42:43] 2026-01-13 01:41:50,989 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 20:42:43] 2026-01-13 01:41:50,989 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 20:42:43] 2026-01-13 01:41:50,989 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 20:42:43] 2026-01-13 01:41:50,989 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 20:42:43] 2026-01-13 01:41:50,989 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 20:42:43] 2026-01-13 01:41:50,989 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 20:42:43] 2026-01-13 01:41:50,989 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 20:42:43] 2026-01-13 01:41:50,989 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 20:42:43] 2026-01-13 01:41:50,989 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 20:42:43] 2026-01-13 01:41:50,989 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 20:42:43] 2026-01-13 01:41:50,989 | INFO     | job 6967962042 has completed (purged errors)
[2026-01-12 20:42:43] 2026-01-13 01:41:50,989 | INFO     | overall cleanup function is called
[2026-01-12 20:42:43] 2026-01-13 01:41:52,001 | INFO     | --- collectZombieJob: --- 10, [1006251]
[2026-01-12 20:42:43] 2026-01-13 01:41:52,001 | INFO     | zombie collector waiting for pid 1006251
[2026-01-12 20:42:43] 2026-01-13 01:41:52,001 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 20:42:43] 2026-01-13 01:41:52,001 | INFO     | collected zombie processes
[2026-01-12 20:42:43] 2026-01-13 01:41:52,001 | INFO     | will attempt to kill all subprocesses of pid=1006251
[2026-01-12 20:42:43] 2026-01-13 01:41:52,905 | INFO     | process IDs to be killed: [1006251] (in reverse order)
[2026-01-12 20:42:43] 2026-01-13 01:41:53,224 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 20:42:43] 2026-01-13 01:41:53,225 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 20:42:43] 2026-01-13 01:41:53,301 | INFO     | did not find any defunct processes belonging to 1006251
[2026-01-12 20:42:43] 2026-01-13 01:41:53,387 | INFO     | did not find any defunct processes belonging to 1006251
[2026-01-12 20:42:43] 2026-01-13 01:41:53,387 | INFO     | ready for new job
[2026-01-12 20:42:43] 2026-01-13 01:41:53,387 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 20:42:43] 2026-01-13 01:41:53,389 | INFO     | ***************************************
[2026-01-12 20:42:43] 2026-01-13 01:41:53,389 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 20:42:43] 2026-01-13 01:41:53,389 | INFO     | ***************************************
[2026-01-12 20:42:43] 2026-01-13 01:41:53,389 | INFO     | 
[2026-01-12 20:42:43] 2026-01-13 01:41:53,404 | INFO     | architecture information:
[2026-01-12 20:42:43] 2026-01-13 01:41:53,417 | INFO     | executing command: cat /etc/os-release
[2026-01-12 20:42:43] 2026-01-13 01:41:53,478 | INFO     | cat /etc/os-release:
[2026-01-12 20:42:43] NAME="CentOS Linux"
[2026-01-12 20:42:43] VERSION="7 (Core)"
[2026-01-12 20:42:43] ID="centos"
[2026-01-12 20:42:43] ID_LIKE="rhel fedora"
[2026-01-12 20:42:43] VERSION_ID="7"
[2026-01-12 20:42:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 20:42:43] ANSI_COLOR="0;31"
[2026-01-12 20:42:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 20:42:43] HOME_URL="https://www.centos.org/"
[2026-01-12 20:42:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 20:42:43] 
[2026-01-12 20:42:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 20:42:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 20:42:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 20:42:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 20:42:43] 
[2026-01-12 20:42:43] 2026-01-13 01:41:53,478 | INFO     | ***************************************
[2026-01-12 20:42:43] 2026-01-13 01:41:53,982 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-12 20:42:43] 2026-01-13 01:41:54,206 | INFO     | sufficient remaining disk space (165875286016 B)
[2026-01-12 20:42:43] 2026-01-13 01:41:54,206 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 20:42:43] 2026-01-13 01:41:54,206 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 20:42:43] 2026-01-13 01:41:54,206 | INFO     | update_server=False
[2026-01-12 20:42:43] 2026-01-13 01:41:54,206 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 20:42:43] 2026-01-13 01:41:54,227 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-12 20:42:43] 2026-01-13 01:41:54,227 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-12 20:42:43] 2026-01-13 01:41:54,227 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 20:42:43] 2026-01-13 01:41:54,227 | INFO     | will abort loop
[2026-01-12 20:42:43] 2026-01-13 01:41:54,359 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 20:42:43] 2026-01-13 01:41:54,403 | INFO     | all payload control threads have been joined
[2026-01-12 20:42:43] 2026-01-13 01:41:54,634 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 20:42:43] 2026-01-13 01:41:55,020 | INFO     | all data control threads have been joined
[2026-01-12 20:42:43] 2026-01-13 01:41:55,212 | INFO     | [job] retrieve thread has finished
[2026-01-12 20:42:43] 2026-01-13 01:41:55,233 | INFO     | [job] job monitor thread has finished
[2026-01-12 20:42:43] 2026-01-13 01:41:55,410 | INFO     | [payload] control thread has finished
[2026-01-12 20:42:43] 2026-01-13 01:41:55,443 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 20:42:43] 2026-01-13 01:41:55,452 | INFO     | [payload] failed_post thread has finished
[2026-01-12 20:42:43] 2026-01-13 01:41:55,847 | INFO     | all job control threads have been joined
[2026-01-12 20:42:43] 2026-01-13 01:41:55,882 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 20:42:43] 2026-01-13 01:41:56,026 | INFO     | [data] control thread has finished
[2026-01-12 20:42:43] 2026-01-13 01:41:56,065 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 20:42:43] 2026-01-13 01:41:56,120 | INFO     | [job] validate thread has finished
[2026-01-12 20:42:43] 2026-01-13 01:41:56,453 | INFO     | [payload] validate_post thread has finished
[2026-01-12 20:42:43] 2026-01-13 01:41:56,650 | INFO     | [data] copytool_out thread has finished
[2026-01-12 20:42:43] 2026-01-13 01:41:56,679 | INFO     | [data] copytool_in thread has finished
[2026-01-12 20:42:43] 2026-01-13 01:41:56,689 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 20:42:43] 2026-01-13 01:41:56,853 | INFO     | [job] control thread has finished
[2026-01-12 20:42:43] 2026-01-13 01:41:56,888 | INFO     | [job] queue monitor thread has finished
[2026-01-12 20:42:43] 2026-01-13 01:41:58,367 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 20:42:43] 2026-01-13 01:42:05,060 | INFO     | job.realtimelogging is not enabled
[2026-01-12 20:42:43] 2026-01-13 01:42:06,066 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 20:42:43] 2026-01-13 01:42:26,525 | INFO     | PID=995809 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-12 20:42:43] 2026-01-13 01:42:26,525 | INFO     | .. there are 29 such processes running
[2026-01-12 20:42:43] 2026-01-13 01:42:26,545 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 20:42:43] 2026-01-13 01:42:26,545 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 20:42:43] 2026-01-13 01:42:26,547 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 20:42:43] 2026-01-13 01:42:35,634 | INFO     | [monitor] cgroup control has ended
[2026-01-12 20:42:43] 2026-01-13 01:42:37,259 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139671801317184)>', '<ExcThread(monitor, started 139671438870272)>']
[2026-01-12 20:42:43] 2026-01-13 01:42:37,616 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 20:42:43] 2026-01-13 01:42:37,616 | INFO     | [monitor] control thread has ended
[2026-01-12 20:42:43] 2026-01-13 01:42:42,285 | INFO     | all workflow threads have been joined
[2026-01-12 20:42:43] 2026-01-13 01:42:42,285 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 20:42:43] 2026-01-13 01:42:42,289 | INFO     | traces error code: 0
[2026-01-12 20:42:43] 2026-01-13 01:42:42,289 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 20:42:43] 2026-01-13 01:42:42,437 [wrapper] ==== pilot stdout END ====
[2026-01-12 20:42:43] 2026-01-13 01:42:42,469 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 20:42:43] 2026-01-13 01:42:42,489 [wrapper] pilotpid: 995809
[2026-01-12 20:42:43] 2026-01-13 01:42:42,510 [wrapper] Pilot exit status: 0
[2026-01-12 20:42:43] 2026-01-13 01:42:42,637 [wrapper] pandaids: 6967962042
[2026-01-12 20:42:43] 2026-01-13 01:42:42,841 [wrapper] cleanup supervisor_pilot 1516482 995810
[2026-01-12 20:42:43] 2026-01-13 01:42:42,853 [wrapper] Test setup, not cleaning
[2026-01-12 20:42:43] 2026-01-13 01:42:42,869 [wrapper] apfmon messages muted
[2026-01-12 20:42:43] 2026-01-13 01:42:42,892 [wrapper] ==== wrapper stdout END ====
[2026-01-12 20:42:43] 2026-01-13 01:42:42,907 [wrapper] ==== wrapper stderr END ====
[2026-01-12 20:42:43]  *** Error codes and diagnostics ***
[2026-01-12 20:42:43]     "exeErrorCode": 0,
[2026-01-12 20:42:43]     "exeErrorDiag": "",
[2026-01-12 20:42:43]     "pilotErrorCode": 0,
[2026-01-12 20:42:43]     "pilotErrorDiag": "",
[2026-01-12 20:42:43]  *** Listing of results directory ***
[2026-01-12 20:42:43] total 626236
[2026-01-12 20:42:43] -rw-r--r--. 1 boincer umatlas    579449 Jan 12 18:27 pilot3.tar.gz
[2026-01-12 20:42:43] -rw-r--r--. 1 boincer umatlas      5112 Jan 12 18:37 queuedata.json
[2026-01-12 20:42:43] -rwx------. 1 boincer umatlas     36322 Jan 12 18:38 runpilot2-wrapper.sh
[2026-01-12 20:42:43] -rw-r--r--. 1 boincer umatlas       100 Jan 12 18:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 20:42:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 12 18:38 run_atlas
[2026-01-12 20:42:43] -rw-r--r--. 1 boincer umatlas       105 Jan 12 18:38 job.xml
[2026-01-12 20:42:43] -rw-r--r--. 2 boincer umatlas 350454705 Jan 12 18:38 EVNT.48188594._000002.pool.root.1
[2026-01-12 20:42:43] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 18:38 start_atlas.sh
[2026-01-12 20:42:43] drwxrwx--x. 2 boincer umatlas      4096 Jan 12 18:38 shared
[2026-01-12 20:42:43] -rw-r--r--. 2 boincer umatlas    592410 Jan 12 18:38 input.tar.gz
[2026-01-12 20:42:43] -rw-r--r--. 1 boincer umatlas         0 Jan 12 18:38 boinc_lockfile
[2026-01-12 20:42:43] -rw-r--r--. 1 boincer umatlas      2621 Jan 12 18:38 pandaJob.out
[2026-01-12 20:42:43] -rw-------. 1 boincer umatlas        57 Jan 12 18:38 setup.sh.local
[2026-01-12 20:42:43] -rw-------. 1 boincer umatlas    988531 Jan 12 18:40 agis_schedconf.cvmfs.json
[2026-01-12 20:42:43] -rw-------. 1 boincer umatlas   1516240 Jan 12 18:40 agis_ddmendpoints.agis.ALL.json
[2026-01-12 20:42:43] drwx------. 5 boincer umatlas      4096 Jan 12 18:40 pilot3
[2026-01-12 20:42:43] -rw-r--r--. 1 boincer umatlas      7183 Jan 12 20:39 init_data.xml
[2026-01-12 20:42:43] -rw-------. 1 boincer umatlas 283987351 Jan 12 20:40 HITS.48188598._000252.pool.root.1
[2026-01-12 20:42:43] -rw-r--r--. 1 boincer umatlas       530 Jan 12 20:40 boinc_task_state.xml
[2026-01-12 20:42:43] -rw-------. 1 boincer umatlas      1053 Jan 12 20:41 memory_monitor_summary.json
[2026-01-12 20:42:43] -rw-------. 1 boincer umatlas    513438 Jan 12 20:41 log.48188598._000252.job.log.tgz.1
[2026-01-12 20:42:43] -rw-------. 1 boincer umatlas      7808 Jan 12 20:41 heartbeat.json
[2026-01-12 20:42:43] -rw-------. 1 boincer umatlas        95 Jan 12 20:42 pilot_heartbeat.json
[2026-01-12 20:42:43] -rw-------. 1 boincer umatlas      5082 Jan 12 20:42 pilotlog.txt
[2026-01-12 20:42:43] -rw-------. 1 boincer umatlas    939485 Jan 12 20:42 log.48188598._000252.job.log.1
[2026-01-12 20:42:43] -rw-r--r--. 1 boincer umatlas        27 Jan 12 20:42 wrapper_checkpoint.txt
[2026-01-12 20:42:43] -rw-r--r--. 1 boincer umatlas      8192 Jan 12 20:42 boinc_mmap_file
[2026-01-12 20:42:43] -rw-------. 1 boincer umatlas       357 Jan 12 20:42 output.list
[2026-01-12 20:42:43] -rw-r--r--. 1 boincer umatlas       620 Jan 12 20:42 runtime_log
[2026-01-12 20:42:43] -rw-------. 1 boincer umatlas   1474560 Jan 12 20:42 result.tar.gz
[2026-01-12 20:42:43] -rw-r--r--. 1 boincer umatlas      9344 Jan 12 20:42 runtime_log.err
[2026-01-12 20:42:43] -rw-------. 1 boincer umatlas       658 Jan 12 20:42 INlNDmBfgz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmpnKDm0KZiMm.diag
[2026-01-12 20:42:43] -rw-r--r--. 1 boincer umatlas     21165 Jan 12 20:42 stderr.txt
[2026-01-12 20:42:43] HITS file was successfully produced:
[2026-01-12 20:42:43] -rw-------. 1 boincer umatlas 283987351 Jan 12 20:40 shared/HITS.pool.root.1
[2026-01-12 20:42:43]  *** Contents of shared directory: ***
[2026-01-12 20:42:43] total 621616
[2026-01-12 20:42:43] -rw-r--r--. 2 boincer umatlas 350454705 Jan 12 18:38 ATLAS.root_0
[2026-01-12 20:42:43] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 18:38 start_atlas.sh
[2026-01-12 20:42:43] -rw-r--r--. 2 boincer umatlas    592410 Jan 12 18:38 input.tar.gz
[2026-01-12 20:42:43] -rw-------. 1 boincer umatlas 283987351 Jan 12 20:40 HITS.pool.root.1
[2026-01-12 20:42:43] -rw-------. 1 boincer umatlas   1474560 Jan 12 20:42 result.tar.gz
20:43:05 (989010): run_atlas exited; CPU time 31813.553190
20:43:05 (989010): called boinc_finish(0)

</stderr_txt>
]]>

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