Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:21:44 (31837): wrapper (7.7.26015): starting
18:21:44 (31837): wrapper: running run_atlas (--nthreads 12)
[2026-01-12 18:21:44] Arguments: --nthreads 12
[2026-01-12 18:21:44] Threads: 12
[2026-01-12 18:21:44] Checking for CVMFS
[2026-01-12 18:21:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 18:21:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 18:21:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 18:21:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 18:21:45] 2.11.2.0 3009 141282 98532 155070 1 1 19630479 20275201 1 130560 0 50578373 99.877 8487263 39605 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 18:21:45] CVMFS is ok
[2026-01-12 18:21:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 18:21:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 18:21:45] Further information can be found at the LHC@home message board.
[2026-01-12 18:21:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 18:21:45] Checking for apptainer binary...
[2026-01-12 18:21:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 18:21:45] Running /usr/bin/apptainer --version
[2026-01-12 18:21:45] apptainer version 1.3.2-1.el7
[2026-01-12 18:21:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 18:21:46] c-115-42.aglt2.org
[2026-01-12 18:21:46] apptainer works
[2026-01-12 18:21:46] Set ATHENA_PROC_NUMBER=12
[2026-01-12 18:21:46] Set ATHENA_CORE_NUMBER=12
[2026-01-12 18:21:46] Starting ATLAS job with PandaID=6962323559
[2026-01-12 18:21:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 19:58:17]  *** The last 200 lines of the pilot log: ***
[2026-01-12 19:58:17]  storage_token=
[2026-01-12 19:58:17]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6962323559/log.47898826._016203.job.log.tgz.1
[2026-01-12 19:58:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/b6/log.47898826._016203.job.log.tgz.1
[2026-01-12 19:58:17]  workdir=None
[2026-01-12 19:58:17] ]
[2026-01-12 19:58:17] 2026-01-13 00:57:11,003 | INFO     | time since job start (5710s) is within the limit (174528.0s)
[2026-01-12 19:58:17] 2026-01-13 00:57:11,007 | INFO     | transferring file log.47898826._016203.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6962323559/log.47898826._016203.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-12 19:58:17] 2026-01-13 00:57:11,007 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6962323559/log.47898826._016203.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._016203.job
[2026-01-12 19:58:17] 2026-01-13 00:57:11,029 | INFO     | adding to output.list: log.47898826._016203.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/b6/log.47898826._016203.job.log.tg
[2026-01-12 19:58:17] 2026-01-13 00:57:11,030 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-12 19:58:17] 2026-01-13 00:57:11,030 | INFO     | summary of transferred files:
[2026-01-12 19:58:17] 2026-01-13 00:57:11,030 | INFO     |  -- lfn=log.47898826._016203.job.log.tgz.1, status_code=0, status=transferred
[2026-01-12 19:58:17] 2026-01-13 00:57:11,030 | INFO     | stage-out finished correctly
[2026-01-12 19:58:17] 2026-01-13 00:57:12,209 | WARNING  | process 9743 can no longer be monitored (due to stat problems) - aborting
[2026-01-12 19:58:17] 2026-01-13 00:57:12,209 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962323559/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 19:58:17] 2026-01-13 00:57:12,292 | INFO     | number of running child processes to parent process 9743: 1
[2026-01-12 19:58:17] 2026-01-13 00:57:12,292 | INFO     | maximum number of monitored processes: 6
[2026-01-12 19:58:17] 2026-01-13 00:57:13,013 | INFO     | time since job start (5712s) is within the limit (174528.0s)
[2026-01-12 19:58:17] 2026-01-13 00:57:13,166 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-12 19:58:17] 2026-01-13 00:57:14,795 | INFO     | monitor loop #425: job 0:6962323559 is in state 'finished'
[2026-01-12 19:58:17] 2026-01-13 00:57:14,795 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 19:58:17] 2026-01-13 00:57:15,019 | INFO     | time since job start (5714s) is within the limit (174528.0s)
[2026-01-12 19:58:17] 2026-01-13 00:57:15,197 | INFO     | job 6962323559 has state=finished
[2026-01-12 19:58:17] 2026-01-13 00:57:15,197 | INFO     | preparing for final server update for job 6962323559 in state='finished'
[2026-01-12 19:58:17] 2026-01-13 00:57:15,198 | INFO     | this job has now completed (state=finished)
[2026-01-12 19:58:17] 2026-01-13 00:57:15,198 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-12 19:58:17] 2026-01-13 00:57:15,198 | INFO     | log transfer has been attempted: DONE
[2026-01-12 19:58:17] 2026-01-13 00:57:15,198 | INFO     | job 6962323559 has finished - writing final server update
[2026-01-12 19:58:17] 2026-01-13 00:57:15,199 | INFO     | total number of processed events: 400 (read)
[2026-01-12 19:58:17] 2026-01-13 00:57:15,199 | INFO     | executing command: lscpu
[2026-01-12 19:58:17] 2026-01-13 00:57:15,225 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-12 19:58:17] 2026-01-13 00:57:17,024 | INFO     | time since job start (5716s) is within the limit (174528.0s)
[2026-01-12 19:58:17] 2026-01-13 00:57:17,025 | INFO     | 5718s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-12 19:58:17] 2026-01-13 00:57:17,298 | INFO     | monitor loop #426: job 0:6962323559 is in state 'finished'
[2026-01-12 19:58:17] 2026-01-13 00:57:17,298 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 19:58:17] 2026-01-13 00:57:19,030 | INFO     | time since job start (5718s) is within the limit (174528.0s)
[2026-01-12 19:58:17] 2026-01-13 00:57:19,801 | INFO     | monitor loop #427: job 0:6962323559 is in state 'finished'
[2026-01-12 19:58:17] 2026-01-13 00:57:19,801 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 19:58:17] 2026-01-13 00:57:19,824 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-12 19:58:17] 2026-01-13 00:57:19,827 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1740.1666666666667
[2026-01-12 19:58:17] 2026-01-13 00:57:19,830 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962323559/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 19:58:17] 2026-01-13 00:57:19,830 | INFO     | extracted standard info from prmon json
[2026-01-12 19:58:17] 2026-01-13 00:57:19,830 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 19:58:17] 2026-01-13 00:57:19,831 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 19:58:17] 2026-01-13 00:57:19,831 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 19:58:17] 2026-01-13 00:57:19,831 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 19:58:17] 2026-01-13 00:57:19,834 | INFO     | fitting pss+swap vs Time
[2026-01-12 19:58:17] 2026-01-13 00:57:19,834 | INFO     | sum of square deviations: 204163828.0
[2026-01-12 19:58:17] 2026-01-13 00:57:19,835 | INFO     | sum of deviations: -11393302572.000002
[2026-01-12 19:58:17] 2026-01-13 00:57:19,835 | INFO     | mean x: 1768263078.0
[2026-01-12 19:58:17] 2026-01-13 00:57:19,835 | INFO     | mean y: 2850382.9770114943
[2026-01-12 19:58:17] 2026-01-13 00:57:19,835 | INFO     | intersect: 98680253093.8531
[2026-01-12 19:58:17] 2026-01-13 00:57:19,835 | INFO     | chi2: 0.14101450774135846
[2026-01-12 19:58:17] 2026-01-13 00:57:19,836 | INFO     | current memory leak: -55.80 B/s (using 87 data points, chi2=0.14)
[2026-01-12 19:58:17] 2026-01-13 00:57:19,836 | INFO     | could have reported an average CPU frequency of 2163 MHz (7 samples)
[2026-01-12 19:58:17] 2026-01-13 00:57:19,836 | INFO     | ..............................
[2026-01-12 19:58:17] 2026-01-13 00:57:19,836 | INFO     | . Timing measurements:
[2026-01-12 19:58:17] 2026-01-13 00:57:19,837 | INFO     | . get job = 0 s
[2026-01-12 19:58:17] 2026-01-13 00:57:19,837 | INFO     | . initial setup = 2 s
[2026-01-12 19:58:17] 2026-01-13 00:57:19,837 | INFO     | . payload setup = 6 s
[2026-01-12 19:58:17] 2026-01-13 00:57:19,837 | INFO     | . stage-in = 0 s
[2026-01-12 19:58:17] 2026-01-13 00:57:19,837 | INFO     | . payload execution = 5681 s
[2026-01-12 19:58:17] 2026-01-13 00:57:19,837 | INFO     | . stage-out = 0 s
[2026-01-12 19:58:17] 2026-01-13 00:57:19,837 | INFO     | . log creation = 0 s
[2026-01-12 19:58:17] 2026-01-13 00:57:19,837 | INFO     | ..............................
[2026-01-12 19:58:17] 2026-01-13 00:57:19,912 | INFO     | 
[2026-01-12 19:58:17] 2026-01-13 00:57:19,912 | INFO     | job summary report
[2026-01-12 19:58:17] 2026-01-13 00:57:19,912 | INFO     | --------------------------------------------------
[2026-01-12 19:58:17] 2026-01-13 00:57:19,912 | INFO     | PanDA job id: 6962323559
[2026-01-12 19:58:17] 2026-01-13 00:57:19,912 | INFO     | task id: 47898826
[2026-01-12 19:58:17] 2026-01-13 00:57:19,912 | INFO     | errors: (none)
[2026-01-12 19:58:17] 2026-01-13 00:57:19,913 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 19:58:17] 2026-01-13 00:57:19,913 | INFO     | pilot state: finished 
[2026-01-12 19:58:17] 2026-01-13 00:57:19,913 | INFO     | transexitcode: 0
[2026-01-12 19:58:17] 2026-01-13 00:57:19,913 | INFO     | exeerrorcode: 0
[2026-01-12 19:58:17] 2026-01-13 00:57:19,913 | INFO     | exeerrordiag: 
[2026-01-12 19:58:17] 2026-01-13 00:57:19,913 | INFO     | exitcode: 0
[2026-01-12 19:58:17] 2026-01-13 00:57:19,913 | INFO     | exitmsg: OK
[2026-01-12 19:58:17] 2026-01-13 00:57:19,914 | INFO     | cpuconsumptiontime: 61151 s
[2026-01-12 19:58:17] 2026-01-13 00:57:19,914 | INFO     | nevents: 400
[2026-01-12 19:58:17] 2026-01-13 00:57:19,914 | INFO     | neventsw: 0
[2026-01-12 19:58:17] 2026-01-13 00:57:19,914 | INFO     | pid: 9743
[2026-01-12 19:58:17] 2026-01-13 00:57:19,914 | INFO     | pgrp: 9743
[2026-01-12 19:58:17] 2026-01-13 00:57:19,914 | INFO     | corecount: 12
[2026-01-12 19:58:17] 2026-01-13 00:57:19,914 | INFO     | event service: False
[2026-01-12 19:58:17] 2026-01-13 00:57:19,915 | INFO     | sizes: {0: 2283798, 1: 2283997, 5: 2284259, 11: 2284315, 5691: 2310953, 5693: 2319951, 5696: 2320135, 5702: 2320329}
[2026-01-12 19:58:17] 2026-01-13 00:57:19,915 | INFO     | --------------------------------------------------
[2026-01-12 19:58:17] 2026-01-13 00:57:19,915 | INFO     | 
[2026-01-12 19:58:17] 2026-01-13 00:57:19,915 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-12 19:58:17] 2026-01-13 00:57:19,942 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 19:58:17] 2026-01-13 00:57:19,942 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 19:58:17] 2026-01-13 00:57:19,942 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 19:58:17] 2026-01-13 00:57:19,942 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 19:58:17] 2026-01-13 00:57:19,942 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 19:58:17] 2026-01-13 00:57:19,943 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 19:58:17] 2026-01-13 00:57:19,943 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 19:58:17] 2026-01-13 00:57:19,943 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 19:58:17] 2026-01-13 00:57:19,943 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 19:58:17] 2026-01-13 00:57:19,943 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 19:58:17] 2026-01-13 00:57:19,944 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 19:58:17] 2026-01-13 00:57:19,944 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 19:58:17] 2026-01-13 00:57:19,944 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 19:58:17] 2026-01-13 00:57:19,944 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 19:58:17] 2026-01-13 00:57:19,944 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 19:58:17] 2026-01-13 00:57:19,944 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 19:58:17] 2026-01-13 00:57:19,945 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 19:58:17] 2026-01-13 00:57:19,945 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 19:58:17] 2026-01-13 00:57:19,945 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 19:58:17] 2026-01-13 00:57:19,945 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 19:58:17] 2026-01-13 00:57:19,945 | INFO     | job 6962323559 has completed (purged errors)
[2026-01-12 19:58:17] 2026-01-13 00:57:19,946 | INFO     | overall cleanup function is called
[2026-01-12 19:58:17] 2026-01-13 00:57:20,953 | INFO     | --- collectZombieJob: --- 10, [9743]
[2026-01-12 19:58:17] 2026-01-13 00:57:20,953 | INFO     | zombie collector waiting for pid 9743
[2026-01-12 19:58:17] 2026-01-13 00:57:20,954 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 19:58:17] 2026-01-13 00:57:20,954 | INFO     | collected zombie processes
[2026-01-12 19:58:17] 2026-01-13 00:57:20,954 | INFO     | will attempt to kill all subprocesses of pid=9743
[2026-01-12 19:58:17] 2026-01-13 00:57:21,038 | INFO     | process IDs to be killed: [9743] (in reverse order)
[2026-01-12 19:58:17] 2026-01-13 00:57:21,089 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 19:58:17] 2026-01-13 00:57:21,090 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 19:58:17] 2026-01-13 00:57:21,093 | INFO     | did not find any defunct processes belonging to 9743
[2026-01-12 19:58:17] 2026-01-13 00:57:21,096 | INFO     | did not find any defunct processes belonging to 9743
[2026-01-12 19:58:17] 2026-01-13 00:57:21,096 | INFO     | ready for new job
[2026-01-12 19:58:17] 2026-01-13 00:57:21,097 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 19:58:17] 2026-01-13 00:57:21,098 | INFO     | ***************************************
[2026-01-12 19:58:17] 2026-01-13 00:57:21,098 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 19:58:17] 2026-01-13 00:57:21,098 | INFO     | ***************************************
[2026-01-12 19:58:17] 2026-01-13 00:57:21,098 | INFO     | 
[2026-01-12 19:58:17] 2026-01-13 00:57:21,099 | INFO     | architecture information:
[2026-01-12 19:58:17] 2026-01-13 00:57:21,099 | INFO     | executing command: cat /etc/os-release
[2026-01-12 19:58:17] 2026-01-13 00:57:21,114 | INFO     | cat /etc/os-release:
[2026-01-12 19:58:17] NAME="CentOS Linux"
[2026-01-12 19:58:17] VERSION="7 (Core)"
[2026-01-12 19:58:17] ID="centos"
[2026-01-12 19:58:17] ID_LIKE="rhel fedora"
[2026-01-12 19:58:17] VERSION_ID="7"
[2026-01-12 19:58:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 19:58:17] ANSI_COLOR="0;31"
[2026-01-12 19:58:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 19:58:17] HOME_URL="https://www.centos.org/"
[2026-01-12 19:58:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 19:58:17] 
[2026-01-12 19:58:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 19:58:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 19:58:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 19:58:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 19:58:17] 
[2026-01-12 19:58:17] 2026-01-13 00:57:21,114 | INFO     | ***************************************
[2026-01-12 19:58:17] 2026-01-13 00:57:21,617 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-12 19:58:17] 2026-01-13 00:57:21,633 | INFO     | sufficient remaining disk space (18534629376 B)
[2026-01-12 19:58:17] 2026-01-13 00:57:21,634 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 19:58:17] 2026-01-13 00:57:21,634 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 19:58:17] 2026-01-13 00:57:21,634 | INFO     | update_server=False
[2026-01-12 19:58:17] 2026-01-13 00:57:21,634 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 19:58:17] 2026-01-13 00:57:21,634 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 19:58:17] 2026-01-13 00:57:21,635 | INFO     | aborting loop
[2026-01-12 19:58:17] 2026-01-13 00:57:21,635 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 19:58:17] 2026-01-13 00:57:21,635 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 19:58:17] 2026-01-13 00:57:21,946 | INFO     | all data control threads have been joined
[2026-01-12 19:58:17] 2026-01-13 00:57:22,063 | INFO     | all job control threads have been joined
[2026-01-12 19:58:17] 2026-01-13 00:57:22,246 | INFO     | all payload control threads have been joined
[2026-01-12 19:58:17] 2026-01-13 00:57:22,640 | INFO     | [job] retrieve thread has finished
[2026-01-12 19:58:17] 2026-01-13 00:57:22,640 | INFO     | [job] job monitor thread has finished
[2026-01-12 19:58:17] 2026-01-13 00:57:22,641 | INFO     | [job] queue monitor thread has finished
[2026-01-12 19:58:17] 2026-01-13 00:57:22,830 | INFO     | [payload] validate_post thread has finished
[2026-01-12 19:58:17] 2026-01-13 00:57:22,903 | INFO     | [data] copytool_in thread has finished
[2026-01-12 19:58:17] 2026-01-13 00:57:22,952 | INFO     | [data] control thread has finished
[2026-01-12 19:58:17] 2026-01-13 00:57:23,069 | INFO     | [job] control thread has finished
[2026-01-12 19:58:17] 2026-01-13 00:57:23,252 | INFO     | [payload] control thread has finished
[2026-01-12 19:58:17] 2026-01-13 00:57:23,438 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 19:58:17] 2026-01-13 00:57:23,522 | INFO     | [job] validate thread has finished
[2026-01-12 19:58:17] 2026-01-13 00:57:23,638 | INFO     | [data] copytool_out thread has finished
[2026-01-12 19:58:17] 2026-01-13 00:57:23,726 | INFO     | [payload] failed_post thread has finished
[2026-01-12 19:58:17] 2026-01-13 00:57:23,745 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 19:58:17] 2026-01-13 00:57:24,061 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 19:58:17] 2026-01-13 00:57:24,087 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 19:58:17] 2026-01-13 00:57:27,751 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 19:58:17] 2026-01-13 00:57:31,756 | INFO     | job.realtimelogging is not enabled
[2026-01-12 19:58:17] 2026-01-13 00:57:32,761 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 19:58:17] 2026-01-13 00:57:52,220 | INFO     | PID=3171 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-12 19:58:17] 2026-01-13 00:57:52,220 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 19:58:17] 2026-01-13 00:57:52,220 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 19:58:17] 2026-01-13 00:57:52,220 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 19:58:17] 2026-01-13 00:58:10,281 | INFO     | [monitor] cgroup control has ended
[2026-01-12 19:58:17] 2026-01-13 00:58:11,687 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140305383298880)>', '<ExcThread(monitor, started 140304954939136)>']
[2026-01-12 19:58:17] 2026-01-13 00:58:12,299 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 19:58:17] 2026-01-13 00:58:12,299 | INFO     | [monitor] control thread has ended
[2026-01-12 19:58:17] 2026-01-13 00:58:16,712 | INFO     | all workflow threads have been joined
[2026-01-12 19:58:17] 2026-01-13 00:58:16,712 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 19:58:17] 2026-01-13 00:58:16,713 | INFO     | traces error code: 0
[2026-01-12 19:58:17] 2026-01-13 00:58:16,713 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 19:58:17] 2026-01-13 00:58:16,793 [wrapper] ==== pilot stdout END ====
[2026-01-12 19:58:17] 2026-01-13 00:58:16,797 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 19:58:17] 2026-01-13 00:58:16,801 [wrapper] pilotpid: 3171
[2026-01-12 19:58:17] 2026-01-13 00:58:16,805 [wrapper] Pilot exit status: 0
[2026-01-12 19:58:17] 2026-01-13 00:58:16,821 [wrapper] pandaids: 6962323559
[2026-01-12 19:58:17] 2026-01-13 00:58:16,864 [wrapper] cleanup supervisor_pilot 18629 3172
[2026-01-12 19:58:17] 2026-01-13 00:58:16,868 [wrapper] Test setup, not cleaning
[2026-01-12 19:58:17] 2026-01-13 00:58:16,872 [wrapper] apfmon messages muted
[2026-01-12 19:58:17] 2026-01-13 00:58:16,876 [wrapper] ==== wrapper stdout END ====
[2026-01-12 19:58:17] 2026-01-13 00:58:16,880 [wrapper] ==== wrapper stderr END ====
[2026-01-12 19:58:17]  *** Error codes and diagnostics ***
[2026-01-12 19:58:17]     "exeErrorCode": 0,
[2026-01-12 19:58:17]     "exeErrorDiag": "",
[2026-01-12 19:58:17]     "pilotErrorCode": 0,
[2026-01-12 19:58:17]     "pilotErrorDiag": "",
[2026-01-12 19:58:17]  *** Listing of results directory ***
[2026-01-12 19:58:17] total 440760
[2026-01-12 19:58:17] -rw-r--r-- 1 boincer umatlas    579449 Jan  7 16:00 pilot3.tar.gz
[2026-01-12 19:58:17] -rwx------ 1 boincer umatlas     36322 Jan  7 16:07 runpilot2-wrapper.sh
[2026-01-12 19:58:17] -rw-r--r-- 1 boincer umatlas      5112 Jan  7 16:16 queuedata.json
[2026-01-12 19:58:17] -rw-r--r-- 1 boincer umatlas       100 Jan 12 18:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 19:58:17] -rwxr-xr-x 1 boincer umatlas      7986 Jan 12 18:21 run_atlas
[2026-01-12 19:58:17] -rw-r--r-- 1 boincer umatlas       105 Jan 12 18:21 job.xml
[2026-01-12 19:58:17] -rw-r--r-- 2 boincer umatlas 225072979 Jan 12 18:21 EVNT.47898824._000752.pool.root.1
[2026-01-12 19:58:17] -rw-r--r-- 2 boincer umatlas    592403 Jan 12 18:21 input.tar.gz
[2026-01-12 19:58:17] -rw-r--r-- 2 boincer umatlas     15847 Jan 12 18:21 start_atlas.sh
[2026-01-12 19:58:17] drwxrwx--x 2 boincer umatlas      4096 Jan 12 18:21 shared
[2026-01-12 19:58:17] -rw-r--r-- 1 boincer umatlas         0 Jan 12 18:21 boinc_lockfile
[2026-01-12 19:58:17] -rw-r--r-- 1 boincer umatlas      2519 Jan 12 18:21 pandaJob.out
[2026-01-12 19:58:17] -rw------- 1 boincer umatlas        57 Jan 12 18:21 setup.sh.local
[2026-01-12 19:58:17] -rw------- 1 boincer umatlas    988531 Jan 12 18:21 agis_schedconf.cvmfs.json
[2026-01-12 19:58:17] -rw------- 1 boincer umatlas   1516240 Jan 12 18:22 agis_ddmendpoints.agis.ALL.json
[2026-01-12 19:58:17] drwx------ 5 boincer umatlas      4096 Jan 12 18:22 pilot3
[2026-01-12 19:58:17] -rw-r--r-- 1 boincer umatlas      5954 Jan 12 19:54 init_data.xml
[2026-01-12 19:58:17] -rw------- 1 boincer umatlas 219902745 Jan 12 19:56 HITS.47898826._016203.pool.root.1
[2026-01-12 19:58:17] -rw-r--r-- 1 boincer umatlas       529 Jan 12 19:57 boinc_task_state.xml
[2026-01-12 19:58:17] -rw------- 1 boincer umatlas      1047 Jan 12 19:57 memory_monitor_summary.json
[2026-01-12 19:58:17] -rw------- 1 boincer umatlas    401665 Jan 12 19:57 log.47898826._016203.job.log.tgz.1
[2026-01-12 19:58:17] -rw------- 1 boincer umatlas        95 Jan 12 19:57 pilot_heartbeat.json
[2026-01-12 19:58:17] -rw------- 1 boincer umatlas      7854 Jan 12 19:57 heartbeat.json
[2026-01-12 19:58:17] -rw-r--r-- 1 boincer umatlas      8192 Jan 12 19:58 boinc_mmap_file
[2026-01-12 19:58:17] -rw-r--r-- 1 boincer umatlas        27 Jan 12 19:58 wrapper_checkpoint.txt
[2026-01-12 19:58:17] -rw------- 1 boincer umatlas      4817 Jan 12 19:58 pilotlog.txt
[2026-01-12 19:58:17] -rw------- 1 boincer umatlas    816259 Jan 12 19:58 log.47898826._016203.job.log.1
[2026-01-12 19:58:17] -rw------- 1 boincer umatlas       357 Jan 12 19:58 output.list
[2026-01-12 19:58:17] -rw-r--r-- 1 boincer umatlas       620 Jan 12 19:58 runtime_log
[2026-01-12 19:58:17] -rw------- 1 boincer umatlas   1239040 Jan 12 19:58 result.tar.gz
[2026-01-12 19:58:17] -rw-r--r-- 1 boincer umatlas      9344 Jan 12 19:58 runtime_log.err
[2026-01-12 19:58:17] -rw------- 1 boincer umatlas       659 Jan 12 19:58 3XdMDmVvpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJ0dKDmyXTXSm.diag
[2026-01-12 19:58:17] -rw-r--r-- 1 boincer umatlas     22257 Jan 12 19:58 stderr.txt
[2026-01-12 19:58:17] HITS file was successfully produced:
[2026-01-12 19:58:17] -rw------- 1 boincer umatlas 219902745 Jan 12 19:56 shared/HITS.pool.root.1
[2026-01-12 19:58:17]  *** Contents of shared directory: ***
[2026-01-12 19:58:17] total 436368
[2026-01-12 19:58:17] -rw-r--r-- 2 boincer umatlas 225072979 Jan 12 18:21 ATLAS.root_0
[2026-01-12 19:58:17] -rw-r--r-- 2 boincer umatlas    592403 Jan 12 18:21 input.tar.gz
[2026-01-12 19:58:17] -rw-r--r-- 2 boincer umatlas     15847 Jan 12 18:21 start_atlas.sh
[2026-01-12 19:58:17] -rw------- 1 boincer umatlas 219902745 Jan 12 19:56 HITS.pool.root.1
[2026-01-12 19:58:17] -rw------- 1 boincer umatlas   1239040 Jan 12 19:58 result.tar.gz
19:58:18 (31837): run_atlas exited; CPU time 61110.288014
19:58:18 (31837): called boinc_finish(0)

</stderr_txt>
]]>

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