Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:47:51 (10105): wrapper (7.7.26015): starting
17:47:51 (10105): wrapper: running run_atlas (--nthreads 12)
[2026-01-12 17:47:51] Arguments: --nthreads 12
[2026-01-12 17:47:51] Threads: 12
[2026-01-12 17:47:51] Checking for CVMFS
[2026-01-12 17:47:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 17:47:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 17:47:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 17:47:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 17:47:51] 2.11.2.0 2925 355981 97456 155068 3 57 13633281 20275201 1 130560 1 150376375 99.954 21033213 16658 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 17:47:51] CVMFS is ok
[2026-01-12 17:47:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 17:47:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 17:47:51] Further information can be found at the LHC@home message board.
[2026-01-12 17:47:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 17:47:51] Checking for apptainer binary...
[2026-01-12 17:47:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 17:47:51] Running /usr/bin/apptainer --version
[2026-01-12 17:47:51] apptainer version 1.3.2-1.el7
[2026-01-12 17:47:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 17:47:53] c-205-9.aglt2.org
[2026-01-12 17:47:53] apptainer works
[2026-01-12 17:47:53] Set ATHENA_PROC_NUMBER=12
[2026-01-12 17:47:53] Set ATHENA_CORE_NUMBER=12
[2026-01-12 17:47:53] Starting ATLAS job with PandaID=6967111525
[2026-01-12 17:47:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 18:23:20]  *** The last 200 lines of the pilot log: ***
[2026-01-12 18:23:20]  replicas=None
[2026-01-12 18:23:20]  scope=mc16_13TeV
[2026-01-12 18:23:20]  status=None
[2026-01-12 18:23:20]  status_code=0
[2026-01-12 18:23:20]  storage_token=
[2026-01-12 18:23:20]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6967111525/log.47962010._003227.job.log.tgz.1
[2026-01-12 18:23:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/ed/5b/log.47962010._003227.job.log.tgz.1
[2026-01-12 18:23:20]  workdir=None
[2026-01-12 18:23:20] ]
[2026-01-12 18:23:20] 2026-01-12 23:22:31,300 | INFO     | transferring file log.47962010._003227.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6967111525/log.47962010._003227.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-12 18:23:20] 2026-01-12 23:22:31,300 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6967111525/log.47962010._003227.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._003227.job
[2026-01-12 18:23:20] 2026-01-12 23:22:31,322 | INFO     | adding to output.list: log.47962010._003227.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/ed/5b/log.47962010._003227.job.log.tgz.
[2026-01-12 18:23:20] 2026-01-12 23:22:31,323 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-12 18:23:20] 2026-01-12 23:22:31,323 | INFO     | summary of transferred files:
[2026-01-12 18:23:20] 2026-01-12 23:22:31,323 | INFO     |  -- lfn=log.47962010._003227.job.log.tgz.1, status_code=0, status=transferred
[2026-01-12 18:23:20] 2026-01-12 23:22:31,324 | INFO     | stage-out finished correctly
[2026-01-12 18:23:20] 2026-01-12 23:22:31,695 | INFO     | time since job start (2061s) is within the limit (349056.0s)
[2026-01-12 18:23:20] 2026-01-12 23:22:31,696 | INFO     | 2063s have passed since pilot start - server update state is 'RUNNING'
[2026-01-12 18:23:20] 2026-01-12 23:22:32,121 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-12 18:23:20] 2026-01-12 23:22:32,970 | INFO     | monitor loop #161: job 0:6967111525 is in state 'finished'
[2026-01-12 18:23:20] 2026-01-12 23:22:32,970 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 18:23:20] 2026-01-12 23:22:33,413 | INFO     | job 6967111525 has state=finished
[2026-01-12 18:23:20] 2026-01-12 23:22:33,413 | INFO     | preparing for final server update for job 6967111525 in state='finished'
[2026-01-12 18:23:20] 2026-01-12 23:22:33,414 | INFO     | this job has now completed (state=finished)
[2026-01-12 18:23:20] 2026-01-12 23:22:33,414 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-12 18:23:20] 2026-01-12 23:22:33,414 | INFO     | log transfer has been attempted: DONE
[2026-01-12 18:23:20] 2026-01-12 23:22:33,414 | INFO     | job 6967111525 has finished - writing final server update
[2026-01-12 18:23:20] 2026-01-12 23:22:33,415 | INFO     | total number of processed events: 50 (read)
[2026-01-12 18:23:20] 2026-01-12 23:22:33,422 | INFO     | executing command: lscpu
[2026-01-12 18:23:20] 2026-01-12 23:22:33,448 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-12 18:23:20] 2026-01-12 23:22:33,702 | INFO     | time since job start (2063s) is within the limit (349056.0s)
[2026-01-12 18:23:20] 2026-01-12 23:22:35,474 | INFO     | monitor loop #162: job 0:6967111525 is in state 'finished'
[2026-01-12 18:23:20] 2026-01-12 23:22:35,474 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 18:23:20] 2026-01-12 23:22:35,719 | INFO     | time since job start (2065s) is within the limit (349056.0s)
[2026-01-12 18:23:20] 2026-01-12 23:22:36,837 | INFO     | PID=14213 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-12 18:23:20] 2026-01-12 23:22:37,837 | INFO     | time since job start (2067s) is within the limit (349056.0s)
[2026-01-12 18:23:20] 2026-01-12 23:22:37,977 | INFO     | monitor loop #163: job 0:6967111525 is in state 'finished'
[2026-01-12 18:23:20] 2026-01-12 23:22:37,977 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 18:23:20] 2026-01-12 23:22:38,347 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-12 18:23:20] 2026-01-12 23:22:38,351 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1673.5833333333333
[2026-01-12 18:23:20] 2026-01-12 23:22:38,354 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6967111525/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 18:23:20] 2026-01-12 23:22:38,355 | INFO     | extracted standard info from prmon json
[2026-01-12 18:23:20] 2026-01-12 23:22:38,355 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 18:23:20] 2026-01-12 23:22:38,355 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 18:23:20] 2026-01-12 23:22:38,357 | INFO     | fitting pss+swap vs Time
[2026-01-12 18:23:20] 2026-01-12 23:22:38,357 | INFO     | sum of square deviations: 6094877.851851851
[2026-01-12 18:23:20] 2026-01-12 23:22:38,357 | INFO     | sum of deviations: -2415858302.5555553
[2026-01-12 18:23:20] 2026-01-12 23:22:38,357 | INFO     | mean x: 1768259219.074074
[2026-01-12 18:23:20] 2026-01-12 23:22:38,358 | INFO     | mean y: 2882237.777777778
[2026-01-12 18:23:20] 2026-01-12 23:22:38,358 | INFO     | intersect: 700896947599.9824
[2026-01-12 18:23:20] 2026-01-12 23:22:38,358 | INFO     | chi2: 0.3692185672969201
[2026-01-12 18:23:20] 2026-01-12 23:22:38,358 | INFO     | current memory leak: -396.38 B/s (using 27 data points, chi2=0.37)
[2026-01-12 18:23:20] 2026-01-12 23:22:38,359 | INFO     | could have reported an average CPU frequency of 1851 MHz (5 samples)
[2026-01-12 18:23:20] 2026-01-12 23:22:38,359 | INFO     | ..............................
[2026-01-12 18:23:20] 2026-01-12 23:22:38,359 | INFO     | . Timing measurements:
[2026-01-12 18:23:20] 2026-01-12 23:22:38,359 | INFO     | . get job = 0 s
[2026-01-12 18:23:20] 2026-01-12 23:22:38,359 | INFO     | . initial setup = 2 s
[2026-01-12 18:23:20] 2026-01-12 23:22:38,359 | INFO     | . payload setup = 8 s
[2026-01-12 18:23:20] 2026-01-12 23:22:38,359 | INFO     | . stage-in = 0 s
[2026-01-12 18:23:20] 2026-01-12 23:22:38,359 | INFO     | . payload execution = 2030 s
[2026-01-12 18:23:20] 2026-01-12 23:22:38,360 | INFO     | . stage-out = 0 s
[2026-01-12 18:23:20] 2026-01-12 23:22:38,360 | INFO     | . log creation = 0 s
[2026-01-12 18:23:20] 2026-01-12 23:22:38,360 | INFO     | ..............................
[2026-01-12 18:23:20] 2026-01-12 23:22:38,610 | INFO     | 
[2026-01-12 18:23:20] 2026-01-12 23:22:38,610 | INFO     | job summary report
[2026-01-12 18:23:20] 2026-01-12 23:22:38,610 | INFO     | --------------------------------------------------
[2026-01-12 18:23:20] 2026-01-12 23:22:38,610 | INFO     | PanDA job id: 6967111525
[2026-01-12 18:23:20] 2026-01-12 23:22:38,610 | INFO     | task id: 47962010
[2026-01-12 18:23:20] 2026-01-12 23:22:38,611 | INFO     | errors: (none)
[2026-01-12 18:23:20] 2026-01-12 23:22:38,611 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 18:23:20] 2026-01-12 23:22:38,611 | INFO     | pilot state: finished 
[2026-01-12 18:23:20] 2026-01-12 23:22:38,611 | INFO     | transexitcode: 0
[2026-01-12 18:23:20] 2026-01-12 23:22:38,611 | INFO     | exeerrorcode: 0
[2026-01-12 18:23:20] 2026-01-12 23:22:38,611 | INFO     | exeerrordiag: 
[2026-01-12 18:23:20] 2026-01-12 23:22:38,612 | INFO     | exitcode: 0
[2026-01-12 18:23:20] 2026-01-12 23:22:38,612 | INFO     | exitmsg: OK
[2026-01-12 18:23:20] 2026-01-12 23:22:38,612 | INFO     | cpuconsumptiontime: 17749 s
[2026-01-12 18:23:20] 2026-01-12 23:22:38,612 | INFO     | nevents: 50
[2026-01-12 18:23:20] 2026-01-12 23:22:38,612 | INFO     | neventsw: 0
[2026-01-12 18:23:20] 2026-01-12 23:22:38,612 | INFO     | pid: 20593
[2026-01-12 18:23:20] 2026-01-12 23:22:38,612 | INFO     | pgrp: 20593
[2026-01-12 18:23:20] 2026-01-12 23:22:38,613 | INFO     | corecount: 12
[2026-01-12 18:23:20] 2026-01-12 23:22:38,613 | INFO     | event service: False
[2026-01-12 18:23:20] 2026-01-12 23:22:38,613 | INFO     | sizes: {0: 2284570, 5: 2284832, 11: 2284888, 2042: 2310699, 2043: 2310698, 2044: 2319748, 2045: 2319932, 2052: 2320210}
[2026-01-12 18:23:20] 2026-01-12 23:22:38,613 | INFO     | --------------------------------------------------
[2026-01-12 18:23:20] 2026-01-12 23:22:38,613 | INFO     | 
[2026-01-12 18:23:20] 2026-01-12 23:22:38,614 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-12 18:23:20] 2026-01-12 23:22:38,638 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 18:23:20] 2026-01-12 23:22:38,638 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 18:23:20] 2026-01-12 23:22:38,639 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 18:23:20] 2026-01-12 23:22:38,639 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 18:23:20] 2026-01-12 23:22:38,639 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 18:23:20] 2026-01-12 23:22:38,639 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 18:23:20] 2026-01-12 23:22:38,639 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 18:23:20] 2026-01-12 23:22:38,639 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 18:23:20] 2026-01-12 23:22:38,640 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 18:23:20] 2026-01-12 23:22:38,640 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 18:23:20] 2026-01-12 23:22:38,640 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 18:23:20] 2026-01-12 23:22:38,640 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 18:23:20] 2026-01-12 23:22:38,640 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 18:23:20] 2026-01-12 23:22:38,640 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 18:23:20] 2026-01-12 23:22:38,641 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 18:23:20] 2026-01-12 23:22:38,641 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 18:23:20] 2026-01-12 23:22:38,641 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 18:23:20] 2026-01-12 23:22:38,641 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 18:23:20] 2026-01-12 23:22:38,641 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 18:23:20] 2026-01-12 23:22:38,641 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 18:23:20] 2026-01-12 23:22:38,642 | INFO     | job 6967111525 has completed (purged errors)
[2026-01-12 18:23:20] 2026-01-12 23:22:38,642 | INFO     | overall cleanup function is called
[2026-01-12 18:23:20] 2026-01-12 23:22:39,657 | INFO     | --- collectZombieJob: --- 10, [20593]
[2026-01-12 18:23:20] 2026-01-12 23:22:39,657 | INFO     | zombie collector waiting for pid 20593
[2026-01-12 18:23:20] 2026-01-12 23:22:39,658 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 18:23:20] 2026-01-12 23:22:39,658 | INFO     | collected zombie processes
[2026-01-12 18:23:20] 2026-01-12 23:22:39,658 | INFO     | will attempt to kill all subprocesses of pid=20593
[2026-01-12 18:23:20] 2026-01-12 23:22:39,751 | INFO     | process IDs to be killed: [20593] (in reverse order)
[2026-01-12 18:23:20] 2026-01-12 23:22:39,802 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 18:23:20] 2026-01-12 23:22:39,803 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 18:23:20] 2026-01-12 23:22:39,807 | INFO     | did not find any defunct processes belonging to 20593
[2026-01-12 18:23:20] 2026-01-12 23:22:39,810 | INFO     | did not find any defunct processes belonging to 20593
[2026-01-12 18:23:20] 2026-01-12 23:22:39,810 | INFO     | ready for new job
[2026-01-12 18:23:20] 2026-01-12 23:22:39,810 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 18:23:20] 2026-01-12 23:22:39,811 | INFO     | ***************************************
[2026-01-12 18:23:20] 2026-01-12 23:22:39,811 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 18:23:20] 2026-01-12 23:22:39,811 | INFO     | ***************************************
[2026-01-12 18:23:20] 2026-01-12 23:22:39,811 | INFO     | 
[2026-01-12 18:23:20] 2026-01-12 23:22:39,812 | INFO     | architecture information:
[2026-01-12 18:23:20] 2026-01-12 23:22:39,813 | INFO     | executing command: cat /etc/os-release
[2026-01-12 18:23:20] 2026-01-12 23:22:39,827 | INFO     | cat /etc/os-release:
[2026-01-12 18:23:20] NAME="CentOS Linux"
[2026-01-12 18:23:20] VERSION="7 (Core)"
[2026-01-12 18:23:20] ID="centos"
[2026-01-12 18:23:20] ID_LIKE="rhel fedora"
[2026-01-12 18:23:20] VERSION_ID="7"
[2026-01-12 18:23:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 18:23:20] ANSI_COLOR="0;31"
[2026-01-12 18:23:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 18:23:20] HOME_URL="https://www.centos.org/"
[2026-01-12 18:23:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 18:23:20] 
[2026-01-12 18:23:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 18:23:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 18:23:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 18:23:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 18:23:20] 
[2026-01-12 18:23:20] 2026-01-12 23:22:39,828 | INFO     | ***************************************
[2026-01-12 18:23:20] 2026-01-12 23:22:40,331 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-12 18:23:20] 2026-01-12 23:22:40,348 | INFO     | sufficient remaining disk space (29150412800 B)
[2026-01-12 18:23:20] 2026-01-12 23:22:40,348 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 18:23:20] 2026-01-12 23:22:40,348 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 18:23:20] 2026-01-12 23:22:40,348 | INFO     | update_server=False
[2026-01-12 18:23:20] 2026-01-12 23:22:40,349 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 18:23:20] 2026-01-12 23:22:40,349 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 18:23:20] 2026-01-12 23:22:40,349 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 18:23:20] 2026-01-12 23:22:40,480 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-12 18:23:20] 2026-01-12 23:22:40,481 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-12 18:23:20] 2026-01-12 23:22:40,481 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 18:23:20] 2026-01-12 23:22:40,481 | INFO     | will abort loop
[2026-01-12 18:23:20] 2026-01-12 23:22:40,939 | INFO     | all payload control threads have been joined
[2026-01-12 18:23:20] 2026-01-12 23:22:41,227 | INFO     | all data control threads have been joined
[2026-01-12 18:23:20] 2026-01-12 23:22:41,352 | INFO     | [job] queue monitor thread has finished
[2026-01-12 18:23:20] 2026-01-12 23:22:41,353 | INFO     | [job] retrieve thread has finished
[2026-01-12 18:23:20] 2026-01-12 23:22:41,486 | INFO     | [job] job monitor thread has finished
[2026-01-12 18:23:20] 2026-01-12 23:22:41,549 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 18:23:20] 2026-01-12 23:22:41,555 | INFO     | all job control threads have been joined
[2026-01-12 18:23:20] 2026-01-12 23:22:41,696 | INFO     | [payload] failed_post thread has finished
[2026-01-12 18:23:20] 2026-01-12 23:22:41,831 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 18:23:20] 2026-01-12 23:22:41,940 | INFO     | [payload] control thread has finished
[2026-01-12 18:23:20] 2026-01-12 23:22:42,135 | INFO     | [data] copytool_in thread has finished
[2026-01-12 18:23:20] 2026-01-12 23:22:42,233 | INFO     | [data] control thread has finished
[2026-01-12 18:23:20] 2026-01-12 23:22:42,270 | INFO     | [payload] validate_post thread has finished
[2026-01-12 18:23:20] 2026-01-12 23:22:42,354 | INFO     | [data] copytool_out thread has finished
[2026-01-12 18:23:20] 2026-01-12 23:22:42,401 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 18:23:20] 2026-01-12 23:22:42,560 | INFO     | [job] control thread has finished
[2026-01-12 18:23:20] 2026-01-12 23:22:42,710 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 18:23:20] 2026-01-12 23:22:42,827 | INFO     | [job] validate thread has finished
[2026-01-12 18:23:20] 2026-01-12 23:22:46,716 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 18:23:20] 2026-01-12 23:22:50,616 | INFO     | job.realtimelogging is not enabled
[2026-01-12 18:23:20] 2026-01-12 23:22:51,622 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 18:23:20] 2026-01-12 23:23:11,042 | INFO     | PID=14213 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-12 18:23:20] 2026-01-12 23:23:11,042 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 18:23:20] 2026-01-12 23:23:11,042 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 18:23:20] 2026-01-12 23:23:11,042 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 18:23:20] 2026-01-12 23:23:13,146 | INFO     | [monitor] cgroup control has ended
[2026-01-12 18:23:20] 2026-01-12 23:23:15,118 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140559347492672)>', '<ExcThread(monitor, started 140558735484672)>']
[2026-01-12 18:23:20] 2026-01-12 23:23:16,068 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 18:23:20] 2026-01-12 23:23:16,068 | INFO     | [monitor] control thread has ended
[2026-01-12 18:23:20] 2026-01-12 23:23:20,143 | INFO     | all workflow threads have been joined
[2026-01-12 18:23:20] 2026-01-12 23:23:20,144 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 18:23:20] 2026-01-12 23:23:20,144 | INFO     | traces error code: 0
[2026-01-12 18:23:20] 2026-01-12 23:23:20,144 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 18:23:20] 2026-01-12 23:23:20,237 [wrapper] ==== pilot stdout END ====
[2026-01-12 18:23:20] 2026-01-12 23:23:20,240 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 18:23:20] 2026-01-12 23:23:20,244 [wrapper] pilotpid: 14213
[2026-01-12 18:23:20] 2026-01-12 23:23:20,248 [wrapper] Pilot exit status: 0
[2026-01-12 18:23:20] 2026-01-12 23:23:20,262 [wrapper] pandaids: 6967111525
[2026-01-12 18:23:20] 2026-01-12 23:23:20,304 [wrapper] cleanup supervisor_pilot  1660 14214
[2026-01-12 18:23:20] 2026-01-12 23:23:20,308 [wrapper] Test setup, not cleaning
[2026-01-12 18:23:20] 2026-01-12 23:23:20,312 [wrapper] apfmon messages muted
[2026-01-12 18:23:20] 2026-01-12 23:23:20,315 [wrapper] ==== wrapper stdout END ====
[2026-01-12 18:23:20] 2026-01-12 23:23:20,319 [wrapper] ==== wrapper stderr END ====
[2026-01-12 18:23:20]  *** Error codes and diagnostics ***
[2026-01-12 18:23:20]     "exeErrorCode": 0,
[2026-01-12 18:23:20]     "exeErrorDiag": "",
[2026-01-12 18:23:20]     "pilotErrorCode": 0,
[2026-01-12 18:23:20]     "pilotErrorDiag": "",
[2026-01-12 18:23:20]  *** Listing of results directory ***
[2026-01-12 18:23:20] total 433288
[2026-01-12 18:23:20] -rw-r--r-- 1 boincer umatlas    579449 Jan 12 09:17 pilot3.tar.gz
[2026-01-12 18:23:20] -rw-r--r-- 1 boincer umatlas      5112 Jan 12 09:49 queuedata.json
[2026-01-12 18:23:20] -rwx------ 1 boincer umatlas     36322 Jan 12 09:52 runpilot2-wrapper.sh
[2026-01-12 18:23:20] -rw-r--r-- 1 boincer umatlas       100 Jan 12 17:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 18:23:20] -rwxr-xr-x 1 boincer umatlas      7986 Jan 12 17:47 run_atlas
[2026-01-12 18:23:20] -rw-r--r-- 1 boincer umatlas       105 Jan 12 17:47 job.xml
[2026-01-12 18:23:20] -rw-r--r-- 2 boincer umatlas 392858194 Jan 12 17:47 EVNT.47962006._000114.pool.root.1
[2026-01-12 18:23:20] -rw-r--r-- 2 boincer umatlas     15847 Jan 12 17:47 start_atlas.sh
[2026-01-12 18:23:20] drwxrwx--x 2 boincer umatlas      4096 Jan 12 17:47 shared
[2026-01-12 18:23:20] -rw-r--r-- 2 boincer umatlas    592618 Jan 12 17:47 input.tar.gz
[2026-01-12 18:23:20] -rw-r--r-- 1 boincer umatlas         0 Jan 12 17:47 boinc_lockfile
[2026-01-12 18:23:20] -rw-r--r-- 1 boincer umatlas      2890 Jan 12 17:47 pandaJob.out
[2026-01-12 18:23:20] -rw------- 1 boincer umatlas        57 Jan 12 17:47 setup.sh.local
[2026-01-12 18:23:20] -rw------- 1 boincer umatlas    988531 Jan 12 17:48 agis_schedconf.cvmfs.json
[2026-01-12 18:23:20] -rw------- 1 boincer umatlas   1516240 Jan 12 17:48 agis_ddmendpoints.agis.ALL.json
[2026-01-12 18:23:20] drwx------ 5 boincer umatlas      4096 Jan 12 17:48 pilot3
[2026-01-12 18:23:20] -rw-r--r-- 1 boincer umatlas       530 Jan 12 18:13 boinc_task_state.xml
[2026-01-12 18:23:20] -rw-r--r-- 1 boincer umatlas      5951 Jan 12 18:21 init_data.xml
[2026-01-12 18:23:20] -rw------- 1 boincer umatlas  43061199 Jan 12 18:22 HITS.47962010._003227.pool.root.1
[2026-01-12 18:23:20] -rw------- 1 boincer umatlas      1050 Jan 12 18:22 memory_monitor_summary.json
[2026-01-12 18:23:20] -rw------- 1 boincer umatlas        95 Jan 12 18:22 pilot_heartbeat.json
[2026-01-12 18:23:20] -rw------- 1 boincer umatlas   1590397 Jan 12 18:22 log.47962010._003227.job.log.tgz.1
[2026-01-12 18:23:20] -rw------- 1 boincer umatlas      8618 Jan 12 18:22 heartbeat.json
[2026-01-12 18:23:20] -rw-r--r-- 1 boincer umatlas      8192 Jan 12 18:22 boinc_mmap_file
[2026-01-12 18:23:20] -rw-r--r-- 1 boincer umatlas        27 Jan 12 18:22 wrapper_checkpoint.txt
[2026-01-12 18:23:20] -rw------- 1 boincer umatlas      5004 Jan 12 18:23 pilotlog.txt
[2026-01-12 18:23:20] -rw------- 1 boincer umatlas    339290 Jan 12 18:23 log.47962010._003227.job.log.1
[2026-01-12 18:23:20] -rw------- 1 boincer umatlas       353 Jan 12 18:23 output.list
[2026-01-12 18:23:20] -rw-r--r-- 1 boincer umatlas       620 Jan 12 18:23 runtime_log
[2026-01-12 18:23:20] -rw------- 1 boincer umatlas   1945600 Jan 12 18:23 result.tar.gz
[2026-01-12 18:23:20] -rw------- 1 boincer umatlas       658 Jan 12 18:23 wfyNDmBSYz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjhnKDmGFoMLo.diag
[2026-01-12 18:23:20] -rw-r--r-- 1 boincer umatlas      9339 Jan 12 18:23 runtime_log.err
[2026-01-12 18:23:20] -rw-r--r-- 1 boincer umatlas     22038 Jan 12 18:23 stderr.txt
[2026-01-12 18:23:20] HITS file was successfully produced:
[2026-01-12 18:23:20] -rw------- 1 boincer umatlas 43061199 Jan 12 18:22 shared/HITS.pool.root.1
[2026-01-12 18:23:20]  *** Contents of shared directory: ***
[2026-01-12 18:23:20] total 428200
[2026-01-12 18:23:20] -rw-r--r-- 2 boincer umatlas 392858194 Jan 12 17:47 ATLAS.root_0
[2026-01-12 18:23:20] -rw-r--r-- 2 boincer umatlas     15847 Jan 12 17:47 start_atlas.sh
[2026-01-12 18:23:20] -rw-r--r-- 2 boincer umatlas    592618 Jan 12 17:47 input.tar.gz
[2026-01-12 18:23:20] -rw------- 1 boincer umatlas  43061199 Jan 12 18:22 HITS.pool.root.1
[2026-01-12 18:23:20] -rw------- 1 boincer umatlas   1945600 Jan 12 18:23 result.tar.gz
18:23:21 (10105): run_atlas exited; CPU time 17377.072230
18:23:21 (10105): called boinc_finish(0)

</stderr_txt>
]]>

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