Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
18:18:38 (1057479): wrapper (7.7.26015): starting
18:18:38 (1057479): wrapper: running run_atlas (--nthreads 4)
[2026-01-12 18:18:38] Arguments: --nthreads 4
[2026-01-12 18:18:38] Threads: 4
[2026-01-12 18:18:38] Checking for CVMFS
[2026-01-12 18:18:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 18:18:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 18:18:39] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 18:18:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 18:18:39] 2.11.3.0 33379 72505 94744 155071 3 56 3864481 4194305 0 130560 0 8343629 99.774 2278099 590 http://s1unl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.59.5:3128 1
[2026-01-12 18:18:39] CVMFS is ok
[2026-01-12 18:18:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 18:18:39] Checking for apptainer binary...
[2026-01-12 18:18:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 18:18:39] Running /usr/bin/apptainer --version
[2026-01-12 18:18:39] apptainer version 1.4.5-2.fc42
[2026-01-12 18:18:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 18:18:39] R7OwensSE
[2026-01-12 18:18:39] apptainer works
[2026-01-12 18:18:39] Set ATHENA_PROC_NUMBER=4
[2026-01-12 18:18:39] Set ATHENA_CORE_NUMBER=4
[2026-01-12 18:18:39] Starting ATLAS job with PandaID=6967682036
[2026-01-12 18:18:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/data/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 22:07:22]  *** The last 200 lines of the pilot log: ***
[2026-01-12 22:07:22] 2026-01-13 04:06:45,651 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-12 22:07:22] 2026-01-13 04:06:46,067 | INFO     | PID=1061286 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 22:07:22] 2026-01-13 04:06:47,068 | INFO     | time since job start (13676s) is within the limit (349056.0s)
[2026-01-12 22:07:22] 2026-01-13 04:06:47,357 | INFO     | monitor loop #1031: job 0:6967682036 is in state 'finished'
[2026-01-12 22:07:22] 2026-01-13 04:06:47,357 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 22:07:22] 2026-01-13 04:06:49,073 | INFO     | time since job start (13678s) is within the limit (349056.0s)
[2026-01-12 22:07:22] 2026-01-13 04:06:49,860 | INFO     | monitor loop #1032: job 0:6967682036 is in state 'finished'
[2026-01-12 22:07:22] 2026-01-13 04:06:49,861 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 22:07:22] 2026-01-13 04:06:50,216 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 22:07:22] 2026-01-13 04:06:50,218 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3459.3660625
[2026-01-12 22:07:22] 2026-01-13 04:06:50,221 | INFO     | using path: /data/boinc/slots/11/PanDA_Pilot-6967682036/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 22:07:22] 2026-01-13 04:06:50,222 | INFO     | extracted standard info from prmon json
[2026-01-12 22:07:22] 2026-01-13 04:06:50,222 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 22:07:22] 2026-01-13 04:06:50,222 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 22:07:22] 2026-01-13 04:06:50,222 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 22:07:22] 2026-01-13 04:06:50,222 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 22:07:22] 2026-01-13 04:06:50,225 | INFO     | fitting pss+swap vs Time
[2026-01-12 22:07:22] 2026-01-13 04:06:50,226 | INFO     | sum of square deviations: 3485088600.0
[2026-01-12 22:07:22] 2026-01-13 04:06:50,227 | INFO     | sum of deviations: -74887767032.0
[2026-01-12 22:07:22] 2026-01-13 04:06:50,227 | INFO     | mean x: 1768270358.5
[2026-01-12 22:07:22] 2026-01-13 04:06:50,227 | INFO     | mean y: 2486761.8839285714
[2026-01-12 22:07:22] 2026-01-13 04:06:50,227 | INFO     | intersect: 37999173175.2334
[2026-01-12 22:07:22] 2026-01-13 04:06:50,227 | INFO     | chi2: 1.7298481412343218
[2026-01-12 22:07:22] 2026-01-13 04:06:50,228 | INFO     | sum of square deviations: 3256879670.0
[2026-01-12 22:07:22] 2026-01-13 04:06:50,229 | INFO     | sum of deviations: -72444968657.0
[2026-01-12 22:07:22] 2026-01-13 04:06:50,229 | INFO     | mean x: 1768270206.0
[2026-01-12 22:07:22] 2026-01-13 04:06:50,229 | INFO     | mean y: 2488394.598173516
[2026-01-12 22:07:22] 2026-01-13 04:06:50,229 | INFO     | intersect: 39335313868.85861
[2026-01-12 22:07:22] 2026-01-13 04:06:50,229 | INFO     | chi2: 1.7215971061372217
[2026-01-12 22:07:22] 2026-01-13 04:06:50,230 | INFO     | current chi2=1.7215971061372217 (change=0.47698031407616226 %)
[2026-01-12 22:07:22] 2026-01-13 04:06:50,230 | INFO     | right removable region: 218
[2026-01-12 22:07:22] 2026-01-13 04:06:50,230 | INFO     | sum of square deviations: 3256879670.0
[2026-01-12 22:07:22] 2026-01-13 04:06:50,231 | INFO     | sum of deviations: -99660938863.00002
[2026-01-12 22:07:22] 2026-01-13 04:06:50,231 | INFO     | mean x: 1768270511.0
[2026-01-12 22:07:22] 2026-01-13 04:06:50,231 | INFO     | mean y: 2503061.127853881
[2026-01-12 22:07:22] 2026-01-13 04:06:50,231 | INFO     | intersect: 54111809251.742134
[2026-01-12 22:07:22] 2026-01-13 04:06:50,232 | INFO     | chi2: 0.442507414633482
[2026-01-12 22:07:22] 2026-01-13 04:06:50,232 | INFO     | current chi2=0.442507414633482 (change=74.41929126115465 %)
[2026-01-12 22:07:22] 2026-01-13 04:06:50,232 | INFO     | sum of square deviations: 3038856977.5
[2026-01-12 22:07:22] 2026-01-13 04:06:50,233 | INFO     | sum of deviations: -91125982221.0
[2026-01-12 22:07:22] 2026-01-13 04:06:50,233 | INFO     | mean x: 1768270663.5
[2026-01-12 22:07:22] 2026-01-13 04:06:50,233 | INFO     | mean y: 2497086.7943925234
[2026-01-12 22:07:22] 2026-01-13 04:06:50,233 | INFO     | intersect: 53027500315.66612
[2026-01-12 22:07:22] 2026-01-13 04:06:50,234 | INFO     | chi2: 0.4398612049168602
[2026-01-12 22:07:22] 2026-01-13 04:06:50,234 | INFO     | current chi2=0.4398612049168602 (change=0.5980034749956818 %)
[2026-01-12 22:07:22] 2026-01-13 04:06:50,234 | INFO     | left removable region: 20
[2026-01-12 22:07:22] 2026-01-13 04:06:50,234 | INFO     | sum of square deviations: 2406926989.5
[2026-01-12 22:07:22] 2026-01-13 04:06:50,235 | INFO     | sum of deviations: -69396812321.00002
[2026-01-12 22:07:22] 2026-01-13 04:06:50,235 | INFO     | mean x: 1768270785.5
[2026-01-12 22:07:22] 2026-01-13 04:06:50,235 | INFO     | mean y: 2484695.1919191917
[2026-01-12 22:07:22] 2026-01-13 04:06:50,235 | INFO     | intersect: 50985483502.12385
[2026-01-12 22:07:22] 2026-01-13 04:06:50,236 | INFO     | chi2: 0.40986200194114814
[2026-01-12 22:07:22] 2026-01-13 04:06:50,236 | INFO     | current memory leak: -28.83 B/s (using 198 data points, chi2=0.41)
[2026-01-12 22:07:22] 2026-01-13 04:06:50,236 | INFO     | could have reported an average CPU frequency of 3463 MHz (11 samples)
[2026-01-12 22:07:22] 2026-01-13 04:06:50,236 | INFO     | ..............................
[2026-01-12 22:07:22] 2026-01-13 04:06:50,236 | INFO     | . Timing measurements:
[2026-01-12 22:07:22] 2026-01-13 04:06:50,236 | INFO     | . get job = 0 s
[2026-01-12 22:07:22] 2026-01-13 04:06:50,236 | INFO     | . initial setup = 3 s
[2026-01-12 22:07:22] 2026-01-13 04:06:50,237 | INFO     | . payload setup = 6 s
[2026-01-12 22:07:22] 2026-01-13 04:06:50,237 | INFO     | . stage-in = 0 s
[2026-01-12 22:07:22] 2026-01-13 04:06:50,237 | INFO     | . payload execution = 13645 s
[2026-01-12 22:07:22] 2026-01-13 04:06:50,237 | INFO     | . stage-out = 2 s
[2026-01-12 22:07:22] 2026-01-13 04:06:50,237 | INFO     | . log creation = 0 s
[2026-01-12 22:07:22] 2026-01-13 04:06:50,237 | INFO     | ..............................
[2026-01-12 22:07:22] 2026-01-13 04:06:50,298 | INFO     | 
[2026-01-12 22:07:22] 2026-01-13 04:06:50,298 | INFO     | job summary report
[2026-01-12 22:07:22] 2026-01-13 04:06:50,298 | INFO     | --------------------------------------------------
[2026-01-12 22:07:22] 2026-01-13 04:06:50,298 | INFO     | PanDA job id: 6967682036
[2026-01-12 22:07:22] 2026-01-13 04:06:50,299 | INFO     | task id: 48188598
[2026-01-12 22:07:22] 2026-01-13 04:06:50,299 | INFO     | errors: (none)
[2026-01-12 22:07:22] 2026-01-13 04:06:50,299 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 22:07:22] 2026-01-13 04:06:50,299 | INFO     | pilot state: finished 
[2026-01-12 22:07:22] 2026-01-13 04:06:50,299 | INFO     | transexitcode: 0
[2026-01-12 22:07:22] 2026-01-13 04:06:50,299 | INFO     | exeerrorcode: 0
[2026-01-12 22:07:22] 2026-01-13 04:06:50,299 | INFO     | exeerrordiag: 
[2026-01-12 22:07:22] 2026-01-13 04:06:50,299 | INFO     | exitcode: 0
[2026-01-12 22:07:22] 2026-01-13 04:06:50,299 | INFO     | exitmsg: OK
[2026-01-12 22:07:22] 2026-01-13 04:06:50,299 | INFO     | cpuconsumptiontime: 53041 s
[2026-01-12 22:07:22] 2026-01-13 04:06:50,299 | INFO     | nevents: 400
[2026-01-12 22:07:22] 2026-01-13 04:06:50,299 | INFO     | neventsw: 0
[2026-01-12 22:07:22] 2026-01-13 04:06:50,299 | INFO     | pid: 1067842
[2026-01-12 22:07:22] 2026-01-13 04:06:50,299 | INFO     | pgrp: 1067842
[2026-01-12 22:07:22] 2026-01-13 04:06:50,299 | INFO     | corecount: 4
[2026-01-12 22:07:22] 2026-01-13 04:06:50,299 | INFO     | event service: False
[2026-01-12 22:07:22] 2026-01-13 04:06:50,299 | INFO     | sizes: {0: 2284124, 4: 2284386, 11: 2284414, 13655: 2314883, 13656: 2314882, 13659: 2324116, 13663: 2324254}
[2026-01-12 22:07:22] 2026-01-13 04:06:50,299 | INFO     | --------------------------------------------------
[2026-01-12 22:07:22] 2026-01-13 04:06:50,299 | INFO     | 
[2026-01-12 22:07:22] 2026-01-13 04:06:50,299 | INFO     | executing command: ls -lF /data/boinc/slots/11
[2026-01-12 22:07:22] 2026-01-13 04:06:50,317 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 22:07:22] 2026-01-13 04:06:50,317 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 22:07:22] 2026-01-13 04:06:50,317 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 22:07:22] 2026-01-13 04:06:50,317 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 22:07:22] 2026-01-13 04:06:50,317 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 22:07:22] 2026-01-13 04:06:50,318 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 22:07:22] 2026-01-13 04:06:50,318 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 22:07:22] 2026-01-13 04:06:50,318 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 22:07:22] 2026-01-13 04:06:50,318 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 22:07:22] 2026-01-13 04:06:50,318 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 22:07:22] 2026-01-13 04:06:50,318 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 22:07:22] 2026-01-13 04:06:50,318 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 22:07:22] 2026-01-13 04:06:50,318 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 22:07:22] 2026-01-13 04:06:50,318 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 22:07:22] 2026-01-13 04:06:50,318 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 22:07:22] 2026-01-13 04:06:50,318 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 22:07:22] 2026-01-13 04:06:50,318 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 22:07:22] 2026-01-13 04:06:50,318 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 22:07:22] 2026-01-13 04:06:50,319 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 22:07:22] 2026-01-13 04:06:50,319 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 22:07:22] 2026-01-13 04:06:50,319 | INFO     | job 6967682036 has completed (purged errors)
[2026-01-12 22:07:22] 2026-01-13 04:06:50,319 | INFO     | overall cleanup function is called
[2026-01-12 22:07:22] 2026-01-13 04:06:51,326 | INFO     | --- collectZombieJob: --- 10, [1067842]
[2026-01-12 22:07:22] 2026-01-13 04:06:51,326 | INFO     | zombie collector waiting for pid 1067842
[2026-01-12 22:07:22] 2026-01-13 04:06:51,327 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 22:07:22] 2026-01-13 04:06:51,327 | INFO     | collected zombie processes
[2026-01-12 22:07:22] 2026-01-13 04:06:51,327 | INFO     | will attempt to kill all subprocesses of pid=1067842
[2026-01-12 22:07:22] 2026-01-13 04:06:51,423 | INFO     | process IDs to be killed: [1067842] (in reverse order)
[2026-01-12 22:07:22] 2026-01-13 04:06:51,481 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 22:07:22] 2026-01-13 04:06:51,481 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 22:07:22] 2026-01-13 04:06:51,485 | INFO     | did not find any defunct processes belonging to 1067842
[2026-01-12 22:07:22] 2026-01-13 04:06:51,488 | INFO     | did not find any defunct processes belonging to 1067842
[2026-01-12 22:07:22] 2026-01-13 04:06:51,488 | INFO     | ready for new job
[2026-01-12 22:07:22] 2026-01-13 04:06:51,488 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 22:07:22] 2026-01-13 04:06:51,490 | INFO     | ***************************************
[2026-01-12 22:07:22] 2026-01-13 04:06:51,490 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 22:07:22] 2026-01-13 04:06:51,490 | INFO     | ***************************************
[2026-01-12 22:07:22] 2026-01-13 04:06:51,490 | INFO     | 
[2026-01-12 22:07:22] 2026-01-13 04:06:51,491 | INFO     | architecture information:
[2026-01-12 22:07:22] 2026-01-13 04:06:51,491 | INFO     | executing command: cat /etc/os-release
[2026-01-12 22:07:22] 2026-01-13 04:06:51,506 | INFO     | cat /etc/os-release:
[2026-01-12 22:07:22] NAME="CentOS Linux"
[2026-01-12 22:07:22] VERSION="7 (Core)"
[2026-01-12 22:07:22] ID="centos"
[2026-01-12 22:07:22] ID_LIKE="rhel fedora"
[2026-01-12 22:07:22] VERSION_ID="7"
[2026-01-12 22:07:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 22:07:22] ANSI_COLOR="0;31"
[2026-01-12 22:07:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 22:07:22] HOME_URL="https://www.centos.org/"
[2026-01-12 22:07:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 22:07:22] 
[2026-01-12 22:07:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 22:07:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 22:07:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 22:07:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 22:07:22] 
[2026-01-12 22:07:22] 2026-01-13 04:06:51,506 | INFO     | ***************************************
[2026-01-12 22:07:22] 2026-01-13 04:06:52,008 | INFO     | executing command: df -mP /data/boinc/slots/11
[2026-01-12 22:07:22] 2026-01-13 04:06:52,025 | INFO     | sufficient remaining disk space (400899964928 B)
[2026-01-12 22:07:22] 2026-01-13 04:06:52,025 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 22:07:22] 2026-01-13 04:06:52,026 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 22:07:22] 2026-01-13 04:06:52,026 | INFO     | update_server=False
[2026-01-12 22:07:22] 2026-01-13 04:06:52,026 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 22:07:22] 2026-01-13 04:06:52,026 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 22:07:22] 2026-01-13 04:06:52,026 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 22:07:22] 2026-01-13 04:06:52,026 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 22:07:22] 2026-01-13 04:06:52,183 | INFO     | all job control threads have been joined
[2026-01-12 22:07:22] 2026-01-13 04:06:52,361 | INFO     | all data control threads have been joined
[2026-01-12 22:07:22] 2026-01-13 04:06:52,363 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-12 22:07:22] 2026-01-13 04:06:52,363 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-12 22:07:22] 2026-01-13 04:06:52,364 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 22:07:22] 2026-01-13 04:06:52,364 | INFO     | will abort loop
[2026-01-12 22:07:22] 2026-01-13 04:06:52,573 | INFO     | all payload control threads have been joined
[2026-01-12 22:07:22] 2026-01-13 04:06:53,030 | INFO     | [job] retrieve thread has finished
[2026-01-12 22:07:22] 2026-01-13 04:06:53,032 | INFO     | [job] queue monitor thread has finished
[2026-01-12 22:07:22] 2026-01-13 04:06:53,178 | INFO     | [payload] validate_post thread has finished
[2026-01-12 22:07:22] 2026-01-13 04:06:53,188 | INFO     | [job] control thread has finished
[2026-01-12 22:07:22] 2026-01-13 04:06:53,366 | INFO     | [data] control thread has finished
[2026-01-12 22:07:22] 2026-01-13 04:06:53,368 | INFO     | [job] job monitor thread has finished
[2026-01-12 22:07:22] 2026-01-13 04:06:53,578 | INFO     | [payload] control thread has finished
[2026-01-12 22:07:22] 2026-01-13 04:06:53,831 | INFO     | [job] validate thread has finished
[2026-01-12 22:07:22] 2026-01-13 04:06:53,834 | INFO     | [data] copytool_in thread has finished
[2026-01-12 22:07:22] 2026-01-13 04:06:54,004 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 22:07:22] 2026-01-13 04:06:54,030 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 22:07:22] 2026-01-13 04:06:54,031 | INFO     | [data] copytool_out thread has finished
[2026-01-12 22:07:22] 2026-01-13 04:06:54,153 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 22:07:22] 2026-01-13 04:06:54,215 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 22:07:22] 2026-01-13 04:06:54,227 | INFO     | [payload] failed_post thread has finished
[2026-01-12 22:07:22] 2026-01-13 04:06:56,032 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 22:07:22] 2026-01-13 04:07:13,856 | INFO     | [monitor] cgroup control has ended
[2026-01-12 22:07:22] 2026-01-13 04:07:14,454 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140206564747072)>', '<ExcThread(monitor, started 140206212622080)>']
[2026-01-12 22:07:22] 2026-01-13 04:07:19,479 | INFO     | all workflow threads have been joined
[2026-01-12 22:07:22] 2026-01-13 04:07:19,479 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 22:07:22] 2026-01-13 04:07:19,480 | INFO     | traces error code: 0
[2026-01-12 22:07:22] 2026-01-13 04:07:19,480 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 22:07:22] 2026-01-13 04:07:22,250 | INFO     | PID=1061286 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 22:07:22] 2026-01-13 04:07:22,251 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 22:07:22] 2026-01-13 04:07:22,251 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 22:07:22] 2026-01-13 04:07:22,252 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 22:07:22] 2026-01-13 04:07:22,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 22:07:22] 2026-01-13 04:07:22,252 | INFO     | [monitor] control thread has ended
[2026-01-12 22:07:22] 2026-01-13 04:07:22,356 [wrapper] ==== pilot stdout END ====
[2026-01-12 22:07:22] 2026-01-13 04:07:22,361 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 22:07:22] 2026-01-13 04:07:22,363 [wrapper] pilotpid: 1061286
[2026-01-12 22:07:22] 2026-01-13 04:07:22,365 [wrapper] Pilot exit status: 0
[2026-01-12 22:07:22] 2026-01-13 04:07:22,375 [wrapper] pandaids: 6967682036
[2026-01-12 22:07:22] 2026-01-13 04:07:22,414 [wrapper] cleanup supervisor_pilot 1096987 1061287
[2026-01-12 22:07:22] 2026-01-13 04:07:22,417 [wrapper] Test setup, not cleaning
[2026-01-12 22:07:22] 2026-01-13 04:07:22,420 [wrapper] apfmon messages muted
[2026-01-12 22:07:22] 2026-01-13 04:07:22,422 [wrapper] ==== wrapper stdout END ====
[2026-01-12 22:07:22] 2026-01-13 04:07:22,426 [wrapper] ==== wrapper stderr END ====
[2026-01-12 22:07:22]  *** Error codes and diagnostics ***
[2026-01-12 22:07:22]     "exeErrorCode": 0,
[2026-01-12 22:07:22]     "exeErrorDiag": "",
[2026-01-12 22:07:22]     "pilotErrorCode": 0,
[2026-01-12 22:07:22]     "pilotErrorDiag": "",
[2026-01-12 22:07:22]  *** Listing of results directory ***
[2026-01-12 22:07:22] total 643044
[2026-01-12 22:07:22] -rw-r--r-- 1 boinc boinc    579449 Jan 12 14:16 pilot3.tar.gz
[2026-01-12 22:07:22] -rw-r--r-- 1 boinc boinc      5112 Jan 12 14:41 queuedata.json
[2026-01-12 22:07:22] -rwx------ 1 boinc boinc     36322 Jan 12 14:41 runpilot2-wrapper.sh
[2026-01-12 22:07:22] -rw-r--r-- 1 boinc boinc       100 Jan 12 18:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 22:07:22] -rwxr-xr-x 1 boinc boinc      7986 Jan 12 18:18 run_atlas
[2026-01-12 22:07:22] -rw-r--r-- 1 boinc boinc       105 Jan 12 18:18 job.xml
[2026-01-12 22:07:22] -rw-r--r-- 2 boinc boinc 351607203 Jan 12 18:18 EVNT.48188594._000009.pool.root.1
[2026-01-12 22:07:22] -rw-r--r-- 1 boinc boinc      9581 Jan 12 18:18 init_data.xml
[2026-01-12 22:07:22] drwxrwx--x 2 boinc boinc      4096 Jan 12 18:18 shared
[2026-01-12 22:07:22] -rw-r--r-- 2 boinc boinc    592407 Jan 12 18:18 input.tar.gz
[2026-01-12 22:07:22] -rw-r--r-- 2 boinc boinc     15847 Jan 12 18:18 start_atlas.sh
[2026-01-12 22:07:22] -rw-r--r-- 1 boinc boinc         0 Jan 12 18:18 boinc_lockfile
[2026-01-12 22:07:22] -rw-r--r-- 1 boinc boinc      2630 Jan 12 18:18 pandaJob.out
[2026-01-12 22:07:22] -rw------- 1 boinc boinc    987763 Jan 12 18:18 agis_schedconf.cvmfs.json
[2026-01-12 22:07:22] drwx------ 5 boinc boinc      4096 Jan 12 18:18 pilot3
[2026-01-12 22:07:22] -rw-r--r-- 1 boinc boinc       531 Jan 12 22:06 boinc_task_state.xml
[2026-01-12 22:07:22] -rw------- 1 boinc boinc 298133894 Jan 12 22:06 HITS.48188598._000212.pool.root.1
[2026-01-12 22:07:22] -rw------- 1 boinc boinc      1020 Jan 12 22:06 memory_monitor_summary.json
[2026-01-12 22:07:22] -rw------- 1 boinc boinc   1516240 Jan 12 22:06 agis_ddmendpoints.agis.ALL.json
[2026-01-12 22:07:22] -rw------- 1 boinc boinc    496926 Jan 12 22:06 log.48188598._000212.job.log.tgz.1
[2026-01-12 22:07:22] -rw------- 1 boinc boinc      7741 Jan 12 22:06 heartbeat.json
[2026-01-12 22:07:22] -rw-r--r-- 1 boinc boinc      8192 Jan 12 22:07 boinc_mmap_file
[2026-01-12 22:07:22] -rw-r--r-- 1 boinc boinc        28 Jan 12 22:07 wrapper_checkpoint.txt
[2026-01-12 22:07:22] -rw------- 1 boinc boinc       747 Jan 12 22:07 pilotlog.txt
[2026-01-12 22:07:22] -rw------- 1 boinc boinc        95 Jan 12 22:07 pilot_heartbeat.json
[2026-01-12 22:07:22] -rw------- 1 boinc boinc   1915578 Jan 12 22:07 log.48188598._000212.job.log.1
[2026-01-12 22:07:22] -rw------- 1 boinc boinc       357 Jan 12 22:07 output.list
[2026-01-12 22:07:22] -rw-r--r-- 1 boinc boinc       620 Jan 12 22:07 runtime_log
[2026-01-12 22:07:22] -rw------- 1 boinc boinc   2426880 Jan 12 22:07 result.tar.gz
[2026-01-12 22:07:22] -rw-r--r-- 1 boinc boinc      8747 Jan 12 22:07 runtime_log.err
[2026-01-12 22:07:22] -rw------- 1 boinc boinc       646 Jan 12 22:07 O1LODm8tdz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmA1hKDmDMBd4m.diag
[2026-01-12 22:07:22] -rw-r--r-- 1 boinc boinc     21191 Jan 12 22:07 stderr.txt
[2026-01-12 22:07:22] HITS file was successfully produced:
[2026-01-12 22:07:22] -rw------- 1 boinc boinc 298133894 Jan 12 22:06 shared/HITS.pool.root.1
[2026-01-12 22:07:22]  *** Contents of shared directory: ***
[2026-01-12 22:07:22] total 637492
[2026-01-12 22:07:22] -rw-r--r-- 2 boinc boinc 351607203 Jan 12 18:18 ATLAS.root_0
[2026-01-12 22:07:22] -rw-r--r-- 2 boinc boinc    592407 Jan 12 18:18 input.tar.gz
[2026-01-12 22:07:22] -rw-r--r-- 2 boinc boinc     15847 Jan 12 18:18 start_atlas.sh
[2026-01-12 22:07:22] -rw------- 1 boinc boinc 298133894 Jan 12 22:06 HITS.pool.root.1
[2026-01-12 22:07:22] -rw------- 1 boinc boinc   2426880 Jan 12 22:07 result.tar.gz
22:07:24 (1057479): run_atlas exited; CPU time 53165.560935
22:07:24 (1057479): called boinc_finish(0)

</stderr_txt>
]]>

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