Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:47:26 (5097): wrapper (7.7.26015): starting
15:47:26 (5097): wrapper: running run_atlas (--nthreads 12)
[2026-01-12 15:47:26] Arguments: --nthreads 12
[2026-01-12 15:47:26] Threads: 12
[2026-01-12 15:47:26] Checking for CVMFS
[2026-01-12 15:47:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 15:47:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 15:47:26] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 15:47:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 15:47:27] 2.11.2.0 3081 355814 97376 155065 3 1 12598117 20275200 1 130560 1 149700226 99.951 20845299 16421 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 15:47:27] CVMFS is ok
[2026-01-12 15:47:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 15:47:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 15:47:27] Further information can be found at the LHC@home message board.
[2026-01-12 15:47:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 15:47:27] Checking for apptainer binary...
[2026-01-12 15:47:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 15:47:27] Running /usr/bin/apptainer --version
[2026-01-12 15:47:27] apptainer version 1.3.2-1.el7
[2026-01-12 15:47:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 15:47:28] c-205-29.aglt2.org
[2026-01-12 15:47:28] apptainer works
[2026-01-12 15:47:28] Set ATHENA_PROC_NUMBER=12
[2026-01-12 15:47:28] Set ATHENA_CORE_NUMBER=12
[2026-01-12 15:47:28] Starting ATLAS job with PandaID=6967681918
[2026-01-12 15:47:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 17:31:01]  *** The last 200 lines of the pilot log: ***
[2026-01-12 17:31:01] 2026-01-12 22:30:30,412 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-12 17:31:01] 2026-01-12 22:30:30,416 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.75
[2026-01-12 17:31:01] 2026-01-12 22:30:30,418 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6967681918/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 17:31:01] 2026-01-12 22:30:30,419 | INFO     | extracted standard info from prmon json
[2026-01-12 17:31:01] 2026-01-12 22:30:30,419 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 17:31:01] 2026-01-12 22:30:30,420 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 17:31:01] 2026-01-12 22:30:30,420 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 17:31:01] 2026-01-12 22:30:30,420 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 17:31:01] 2026-01-12 22:30:30,423 | INFO     | fitting pss+swap vs Time
[2026-01-12 17:31:01] 2026-01-12 22:30:30,423 | INFO     | sum of square deviations: 319447850.0
[2026-01-12 17:31:01] 2026-01-12 22:30:30,424 | INFO     | sum of deviations: -2764034439.999998
[2026-01-12 17:31:01] 2026-01-12 22:30:30,424 | INFO     | mean x: 1768253944.0
[2026-01-12 17:31:01] 2026-01-12 22:30:30,424 | INFO     | mean y: 2757012.8118811883
[2026-01-12 17:31:01] 2026-01-12 22:30:30,424 | INFO     | intersect: 15302640232.817366
[2026-01-12 17:31:01] 2026-01-12 22:30:30,424 | INFO     | chi2: 2.230887716583368
[2026-01-12 17:31:01] 2026-01-12 22:30:30,425 | INFO     | sum of square deviations: 274312120.0
[2026-01-12 17:31:01] 2026-01-12 22:30:30,425 | INFO     | sum of deviations: 4723782507.499998
[2026-01-12 17:31:01] 2026-01-12 22:30:30,425 | INFO     | mean x: 1768253791.5
[2026-01-12 17:31:01] 2026-01-12 22:30:30,425 | INFO     | mean y: 2781304.2395833335
[2026-01-12 17:31:01] 2026-01-12 22:30:30,425 | INFO     | intersect: -30447372808.92264
[2026-01-12 17:31:01] 2026-01-12 22:30:30,426 | INFO     | chi2: 1.453148498317543
[2026-01-12 17:31:01] 2026-01-12 22:30:30,426 | INFO     | current chi2=1.453148498317543 (change=34.86232016450125 %)
[2026-01-12 17:31:01] 2026-01-12 22:30:30,426 | INFO     | sum of square deviations: 233641590.0
[2026-01-12 17:31:01] 2026-01-12 22:30:30,426 | INFO     | sum of deviations: 4632384835.0
[2026-01-12 17:31:01] 2026-01-12 22:30:30,427 | INFO     | mean x: 1768253639.0
[2026-01-12 17:31:01] 2026-01-12 22:30:30,427 | INFO     | mean y: 2780964.043956044
[2026-01-12 17:31:01] 2026-01-12 22:30:30,427 | INFO     | intersect: -35056179821.73552
[2026-01-12 17:31:01] 2026-01-12 22:30:30,427 | INFO     | chi2: 1.4563341666076974
[2026-01-12 17:31:01] 2026-01-12 22:30:30,427 | INFO     | current chi2=1.4563341666076974 (change=-0.21922524049282732 %)
[2026-01-12 17:31:01] 2026-01-12 22:30:30,427 | INFO     | right removable region: 90
[2026-01-12 17:31:01] 2026-01-12 22:30:30,427 | INFO     | sum of square deviations: 274312120.0
[2026-01-12 17:31:01] 2026-01-12 22:30:30,428 | INFO     | sum of deviations: -18111769890.5
[2026-01-12 17:31:01] 2026-01-12 22:30:30,428 | INFO     | mean x: 1768254096.5
[2026-01-12 17:31:01] 2026-01-12 22:30:30,428 | INFO     | mean y: 2807594.6354166665
[2026-01-12 17:31:01] 2026-01-12 22:30:30,428 | INFO     | intersect: 116753796591.19154
[2026-01-12 17:31:01] 2026-01-12 22:30:30,428 | INFO     | chi2: 0.8895405792913336
[2026-01-12 17:31:01] 2026-01-12 22:30:30,429 | INFO     | current chi2=0.8895405792913336 (change=60.126160869553935 %)
[2026-01-12 17:31:01] 2026-01-12 22:30:30,429 | INFO     | sum of square deviations: 233641590.0
[2026-01-12 17:31:01] 2026-01-12 22:30:30,429 | INFO     | sum of deviations: -15635858976.999998
[2026-01-12 17:31:01] 2026-01-12 22:30:30,429 | INFO     | mean x: 1768254249.0
[2026-01-12 17:31:01] 2026-01-12 22:30:30,429 | INFO     | mean y: 2798255.758241758
[2026-01-12 17:31:01] 2026-01-12 22:30:30,430 | INFO     | intersect: 118338639373.9643
[2026-01-12 17:31:01] 2026-01-12 22:30:30,430 | INFO     | chi2: 0.8897118739884364
[2026-01-12 17:31:01] 2026-01-12 22:30:30,430 | INFO     | current chi2=0.8897118739884364 (change=-0.019256535462308932 %)
[2026-01-12 17:31:01] 2026-01-12 22:30:30,430 | INFO     | left removable region: 20
[2026-01-12 17:31:01] 2026-01-12 22:30:30,430 | INFO     | sum of square deviations: 106336877.5
[2026-01-12 17:31:01] 2026-01-12 22:30:30,430 | INFO     | sum of deviations: -2945419891.9999995
[2026-01-12 17:31:01] 2026-01-12 22:30:30,431 | INFO     | mean x: 1768254218.5
[2026-01-12 17:31:01] 2026-01-12 22:30:30,431 | INFO     | mean y: 2803259.342857143
[2026-01-12 17:31:01] 2026-01-12 22:30:30,431 | INFO     | intersect: 48981589092.91046
[2026-01-12 17:31:01] 2026-01-12 22:30:30,431 | INFO     | chi2: 0.04450768384899588
[2026-01-12 17:31:01] 2026-01-12 22:30:30,431 | INFO     | current memory leak: -27.70 B/s (using 70 data points, chi2=0.04)
[2026-01-12 17:31:01] 2026-01-12 22:30:30,431 | INFO     | could have reported an average CPU frequency of 2122 MHz (7 samples)
[2026-01-12 17:31:01] 2026-01-12 22:30:30,432 | INFO     | ..............................
[2026-01-12 17:31:01] 2026-01-12 22:30:30,432 | INFO     | . Timing measurements:
[2026-01-12 17:31:01] 2026-01-12 22:30:30,432 | INFO     | . get job = 0 s
[2026-01-12 17:31:01] 2026-01-12 22:30:30,432 | INFO     | . initial setup = 2 s
[2026-01-12 17:31:01] 2026-01-12 22:30:30,432 | INFO     | . payload setup = 7 s
[2026-01-12 17:31:01] 2026-01-12 22:30:30,432 | INFO     | . stage-in = 0 s
[2026-01-12 17:31:01] 2026-01-12 22:30:30,432 | INFO     | . payload execution = 6131 s
[2026-01-12 17:31:01] 2026-01-12 22:30:30,432 | INFO     | . stage-out = 0 s
[2026-01-12 17:31:01] 2026-01-12 22:30:30,432 | INFO     | . log creation = 0 s
[2026-01-12 17:31:01] 2026-01-12 22:30:30,433 | INFO     | ..............................
[2026-01-12 17:31:01] 2026-01-12 22:30:30,514 | INFO     | 
[2026-01-12 17:31:01] 2026-01-12 22:30:30,514 | INFO     | job summary report
[2026-01-12 17:31:01] 2026-01-12 22:30:30,514 | INFO     | --------------------------------------------------
[2026-01-12 17:31:01] 2026-01-12 22:30:30,514 | INFO     | PanDA job id: 6967681918
[2026-01-12 17:31:01] 2026-01-12 22:30:30,514 | INFO     | task id: 48188598
[2026-01-12 17:31:01] 2026-01-12 22:30:30,515 | INFO     | errors: (none)
[2026-01-12 17:31:01] 2026-01-12 22:30:30,515 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 17:31:01] 2026-01-12 22:30:30,515 | INFO     | pilot state: finished 
[2026-01-12 17:31:01] 2026-01-12 22:30:30,515 | INFO     | transexitcode: 0
[2026-01-12 17:31:01] 2026-01-12 22:30:30,515 | INFO     | exeerrorcode: 0
[2026-01-12 17:31:01] 2026-01-12 22:30:30,515 | INFO     | exeerrordiag: 
[2026-01-12 17:31:01] 2026-01-12 22:30:30,516 | INFO     | exitcode: 0
[2026-01-12 17:31:01] 2026-01-12 22:30:30,516 | INFO     | exitmsg: OK
[2026-01-12 17:31:01] 2026-01-12 22:30:30,516 | INFO     | cpuconsumptiontime: 67843 s
[2026-01-12 17:31:01] 2026-01-12 22:30:30,516 | INFO     | nevents: 400
[2026-01-12 17:31:01] 2026-01-12 22:30:30,516 | INFO     | neventsw: 0
[2026-01-12 17:31:01] 2026-01-12 22:30:30,516 | INFO     | pid: 15576
[2026-01-12 17:31:01] 2026-01-12 22:30:30,516 | INFO     | pgrp: 15576
[2026-01-12 17:31:01] 2026-01-12 22:30:30,517 | INFO     | corecount: 12
[2026-01-12 17:31:01] 2026-01-12 22:30:30,517 | INFO     | event service: False
[2026-01-12 17:31:01] 2026-01-12 22:30:30,517 | INFO     | sizes: {0: 2284122, 5: 2284384, 11: 2284440, 6142: 2311233, 6143: 2320287, 6149: 2320425}
[2026-01-12 17:31:01] 2026-01-12 22:30:30,517 | INFO     | --------------------------------------------------
[2026-01-12 17:31:01] 2026-01-12 22:30:30,517 | INFO     | 
[2026-01-12 17:31:01] 2026-01-12 22:30:30,518 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-12 17:31:01] 2026-01-12 22:30:30,541 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 17:31:01] 2026-01-12 22:30:30,541 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 17:31:01] 2026-01-12 22:30:30,542 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 17:31:01] 2026-01-12 22:30:30,542 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 17:31:01] 2026-01-12 22:30:30,542 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 17:31:01] 2026-01-12 22:30:30,542 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 17:31:01] 2026-01-12 22:30:30,542 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 17:31:01] 2026-01-12 22:30:30,542 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 17:31:01] 2026-01-12 22:30:30,543 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 17:31:01] 2026-01-12 22:30:30,543 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 17:31:01] 2026-01-12 22:30:30,543 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 17:31:01] 2026-01-12 22:30:30,543 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 17:31:01] 2026-01-12 22:30:30,543 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 17:31:01] 2026-01-12 22:30:30,543 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 17:31:01] 2026-01-12 22:30:30,544 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 17:31:01] 2026-01-12 22:30:30,544 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 17:31:01] 2026-01-12 22:30:30,544 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 17:31:01] 2026-01-12 22:30:30,544 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 17:31:01] 2026-01-12 22:30:30,544 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 17:31:01] 2026-01-12 22:30:30,544 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 17:31:01] 2026-01-12 22:30:30,545 | INFO     | job 6967681918 has completed (purged errors)
[2026-01-12 17:31:01] 2026-01-12 22:30:30,545 | INFO     | overall cleanup function is called
[2026-01-12 17:31:01] 2026-01-12 22:30:31,553 | INFO     | --- collectZombieJob: --- 10, [15576]
[2026-01-12 17:31:01] 2026-01-12 22:30:31,553 | INFO     | zombie collector waiting for pid 15576
[2026-01-12 17:31:01] 2026-01-12 22:30:31,553 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 17:31:01] 2026-01-12 22:30:31,554 | INFO     | collected zombie processes
[2026-01-12 17:31:01] 2026-01-12 22:30:31,554 | INFO     | will attempt to kill all subprocesses of pid=15576
[2026-01-12 17:31:01] 2026-01-12 22:30:31,648 | INFO     | process IDs to be killed: [15576] (in reverse order)
[2026-01-12 17:31:01] 2026-01-12 22:30:31,698 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 17:31:01] 2026-01-12 22:30:31,698 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 17:31:01] 2026-01-12 22:30:31,702 | INFO     | did not find any defunct processes belonging to 15576
[2026-01-12 17:31:01] 2026-01-12 22:30:31,705 | INFO     | did not find any defunct processes belonging to 15576
[2026-01-12 17:31:01] 2026-01-12 22:30:31,705 | INFO     | ready for new job
[2026-01-12 17:31:01] 2026-01-12 22:30:31,705 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 17:31:01] 2026-01-12 22:30:31,706 | INFO     | ***************************************
[2026-01-12 17:31:01] 2026-01-12 22:30:31,706 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 17:31:01] 2026-01-12 22:30:31,706 | INFO     | ***************************************
[2026-01-12 17:31:01] 2026-01-12 22:30:31,706 | INFO     | 
[2026-01-12 17:31:01] 2026-01-12 22:30:31,707 | INFO     | architecture information:
[2026-01-12 17:31:01] 2026-01-12 22:30:31,707 | INFO     | executing command: cat /etc/os-release
[2026-01-12 17:31:01] 2026-01-12 22:30:31,721 | INFO     | cat /etc/os-release:
[2026-01-12 17:31:01] NAME="CentOS Linux"
[2026-01-12 17:31:01] VERSION="7 (Core)"
[2026-01-12 17:31:01] ID="centos"
[2026-01-12 17:31:01] ID_LIKE="rhel fedora"
[2026-01-12 17:31:01] VERSION_ID="7"
[2026-01-12 17:31:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 17:31:01] ANSI_COLOR="0;31"
[2026-01-12 17:31:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 17:31:01] HOME_URL="https://www.centos.org/"
[2026-01-12 17:31:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 17:31:01] 
[2026-01-12 17:31:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 17:31:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 17:31:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 17:31:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 17:31:01] 
[2026-01-12 17:31:01] 2026-01-12 22:30:31,722 | INFO     | ***************************************
[2026-01-12 17:31:01] 2026-01-12 22:30:32,225 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-12 17:31:01] 2026-01-12 22:30:32,240 | INFO     | sufficient remaining disk space (28982640640 B)
[2026-01-12 17:31:01] 2026-01-12 22:30:32,241 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 17:31:01] 2026-01-12 22:30:32,241 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 17:31:01] 2026-01-12 22:30:32,241 | INFO     | update_server=False
[2026-01-12 17:31:01] 2026-01-12 22:30:32,241 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 17:31:01] 2026-01-12 22:30:32,242 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-12 17:31:01] 2026-01-12 22:30:32,242 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 17:31:01] 2026-01-12 22:30:32,242 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 17:31:01] 2026-01-12 22:30:32,243 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 17:31:01] 2026-01-12 22:30:32,243 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 17:31:01] 2026-01-12 22:30:32,333 | INFO     | all payload control threads have been joined
[2026-01-12 17:31:01] 2026-01-12 22:30:32,334 | INFO     | all job control threads have been joined
[2026-01-12 17:31:01] 2026-01-12 22:30:32,371 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 17:31:01] 2026-01-12 22:30:32,486 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-12 17:31:01] 2026-01-12 22:30:32,486 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-12 17:31:01] 2026-01-12 22:30:32,487 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 17:31:01] 2026-01-12 22:30:32,487 | INFO     | will abort loop
[2026-01-12 17:31:01] 2026-01-12 22:30:33,243 | INFO     | [job] queue monitor thread has finished
[2026-01-12 17:31:01] 2026-01-12 22:30:33,247 | INFO     | [job] retrieve thread has finished
[2026-01-12 17:31:01] 2026-01-12 22:30:33,320 | INFO     | [job] validate thread has finished
[2026-01-12 17:31:01] 2026-01-12 22:30:33,325 | INFO     | [payload] failed_post thread has finished
[2026-01-12 17:31:01] 2026-01-12 22:30:33,327 | INFO     | all data control threads have been joined
[2026-01-12 17:31:01] 2026-01-12 22:30:33,337 | INFO     | [payload] control thread has finished
[2026-01-12 17:31:01] 2026-01-12 22:30:33,340 | INFO     | [job] control thread has finished
[2026-01-12 17:31:01] 2026-01-12 22:30:33,492 | INFO     | [job] job monitor thread has finished
[2026-01-12 17:31:01] 2026-01-12 22:30:33,497 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 17:31:01] 2026-01-12 22:30:33,834 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 17:31:01] 2026-01-12 22:30:33,917 | INFO     | [payload] validate_post thread has finished
[2026-01-12 17:31:01] 2026-01-12 22:30:34,332 | INFO     | [data] control thread has finished
[2026-01-12 17:31:01] 2026-01-12 22:30:34,376 | INFO     | [data] copytool_out thread has finished
[2026-01-12 17:31:01] 2026-01-12 22:30:34,552 | INFO     | [data] copytool_in thread has finished
[2026-01-12 17:31:01] 2026-01-12 22:30:34,720 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 17:31:01] 2026-01-12 22:30:34,955 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 17:31:01] 2026-01-12 22:30:38,960 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 17:31:01] 2026-01-12 22:30:42,616 | INFO     | job.realtimelogging is not enabled
[2026-01-12 17:31:01] 2026-01-12 22:30:43,622 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 17:31:01] 2026-01-12 22:30:54,597 | INFO     | [monitor] cgroup control has ended
[2026-01-12 17:31:01] 2026-01-12 22:30:56,027 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139784391087936)>', '<ExcThread(monitor, started 139783711999744)>']
[2026-01-12 17:31:01] 2026-01-12 22:30:56,355 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 17:31:01] 2026-01-12 22:30:56,355 | INFO     | [monitor] control thread has ended
[2026-01-12 17:31:01] 2026-01-12 22:31:01,030 | INFO     | all workflow threads have been joined
[2026-01-12 17:31:01] 2026-01-12 22:31:01,030 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 17:31:01] 2026-01-12 22:31:01,031 | INFO     | traces error code: 0
[2026-01-12 17:31:01] 2026-01-12 22:31:01,031 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 17:31:01] 2026-01-12 22:31:01,115 [wrapper] ==== pilot stdout END ====
[2026-01-12 17:31:01] 2026-01-12 22:31:01,118 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 17:31:01] 2026-01-12 22:31:01,122 [wrapper] pilotpid: 9158
[2026-01-12 17:31:01] 2026-01-12 22:31:01,126 [wrapper] Pilot exit status: 0
[2026-01-12 17:31:01] 2026-01-12 22:31:01,143 [wrapper] pandaids: 6967681918
[2026-01-12 17:31:01] 2026-01-12 22:31:01,184 [wrapper] cleanup supervisor_pilot 14698 9159
[2026-01-12 17:31:01] 2026-01-12 22:31:01,188 [wrapper] Test setup, not cleaning
[2026-01-12 17:31:01] 2026-01-12 22:31:01,192 [wrapper] apfmon messages muted
[2026-01-12 17:31:01] 2026-01-12 22:31:01,196 [wrapper] ==== wrapper stdout END ====
[2026-01-12 17:31:01] 2026-01-12 22:31:01,200 [wrapper] ==== wrapper stderr END ====
[2026-01-12 17:31:01]  *** Error codes and diagnostics ***
[2026-01-12 17:31:01]     "exeErrorCode": 0,
[2026-01-12 17:31:01]     "exeErrorDiag": "",
[2026-01-12 17:31:01]     "pilotErrorCode": 0,
[2026-01-12 17:31:01]     "pilotErrorDiag": "",
[2026-01-12 17:31:01]  *** Listing of results directory ***
[2026-01-12 17:31:01] total 633396
[2026-01-12 17:31:01] -rw-r--r-- 1 boincer umatlas    579449 Jan 12 15:16 pilot3.tar.gz
[2026-01-12 17:31:01] -rwx------ 1 boincer umatlas     36322 Jan 12 15:41 runpilot2-wrapper.sh
[2026-01-12 17:31:01] -rw-r--r-- 1 boincer umatlas      5112 Jan 12 15:41 queuedata.json
[2026-01-12 17:31:01] -rw-r--r-- 1 boincer umatlas       100 Jan 12 15:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 17:31:01] -rwxr-xr-x 1 boincer umatlas      7986 Jan 12 15:47 run_atlas
[2026-01-12 17:31:01] -rw-r--r-- 1 boincer umatlas       105 Jan 12 15:47 job.xml
[2026-01-12 17:31:01] -rw-r--r-- 2 boincer umatlas 354709249 Jan 12 15:47 EVNT.48188594._000004.pool.root.1
[2026-01-12 17:31:01] -rw-r--r-- 2 boincer umatlas     15847 Jan 12 15:47 start_atlas.sh
[2026-01-12 17:31:01] drwxrwx--x 2 boincer umatlas      4096 Jan 12 15:47 shared
[2026-01-12 17:31:01] -rw-r--r-- 2 boincer umatlas    592401 Jan 12 15:47 input.tar.gz
[2026-01-12 17:31:01] -rw-r--r-- 1 boincer umatlas         0 Jan 12 15:47 boinc_lockfile
[2026-01-12 17:31:01] -rw-r--r-- 1 boincer umatlas      2628 Jan 12 15:47 pandaJob.out
[2026-01-12 17:31:01] -rw------- 1 boincer umatlas        57 Jan 12 15:47 setup.sh.local
[2026-01-12 17:31:01] -rw------- 1 boincer umatlas    988547 Jan 12 15:47 agis_schedconf.cvmfs.json
[2026-01-12 17:31:01] -rw------- 1 boincer umatlas   1516240 Jan 12 15:47 agis_ddmendpoints.agis.ALL.json
[2026-01-12 17:31:01] drwx------ 5 boincer umatlas      4096 Jan 12 15:47 pilot3
[2026-01-12 17:31:01] -rw-r--r-- 1 boincer umatlas      5953 Jan 12 17:27 init_data.xml
[2026-01-12 17:31:01] -rw------- 1 boincer umatlas 287179962 Jan 12 17:29 HITS.48188598._000094.pool.root.1
[2026-01-12 17:31:01] -rw------- 1 boincer umatlas        95 Jan 12 17:30 pilot_heartbeat.json
[2026-01-12 17:31:01] -rw-r--r-- 1 boincer umatlas       530 Jan 12 17:30 boinc_task_state.xml
[2026-01-12 17:31:01] -rw------- 1 boincer umatlas      1046 Jan 12 17:30 memory_monitor_summary.json
[2026-01-12 17:31:01] -rw------- 1 boincer umatlas    520264 Jan 12 17:30 log.48188598._000094.job.log.tgz.1
[2026-01-12 17:31:01] -rw------- 1 boincer umatlas      7839 Jan 12 17:30 heartbeat.json
[2026-01-12 17:31:01] -rw-r--r-- 1 boincer umatlas      8192 Jan 12 17:30 boinc_mmap_file
[2026-01-12 17:31:01] -rw-r--r-- 1 boincer umatlas        27 Jan 12 17:30 wrapper_checkpoint.txt
[2026-01-12 17:31:01] -rw------- 1 boincer umatlas      4810 Jan 12 17:31 pilotlog.txt
[2026-01-12 17:31:01] -rw------- 1 boincer umatlas    876854 Jan 12 17:31 log.48188598._000094.job.log.1
[2026-01-12 17:31:01] -rw------- 1 boincer umatlas       357 Jan 12 17:31 output.list
[2026-01-12 17:31:01] -rw-r--r-- 1 boincer umatlas       620 Jan 12 17:31 runtime_log
[2026-01-12 17:31:01] -rw------- 1 boincer umatlas   1413120 Jan 12 17:31 result.tar.gz
[2026-01-12 17:31:01] -rw-r--r-- 1 boincer umatlas      9344 Jan 12 17:31 runtime_log.err
[2026-01-12 17:31:01] -rw------- 1 boincer umatlas       660 Jan 12 17:31 jIlMDm0tdz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm7nnKDmQXXrSm.diag
[2026-01-12 17:31:01] -rw-r--r-- 1 boincer umatlas     20934 Jan 12 17:31 stderr.txt
[2026-01-12 17:31:01] HITS file was successfully produced:
[2026-01-12 17:31:01] -rw------- 1 boincer umatlas 287179962 Jan 12 17:29 shared/HITS.pool.root.1
[2026-01-12 17:31:01]  *** Contents of shared directory: ***
[2026-01-12 17:31:01] total 628828
[2026-01-12 17:31:01] -rw-r--r-- 2 boincer umatlas 354709249 Jan 12 15:47 ATLAS.root_0
[2026-01-12 17:31:01] -rw-r--r-- 2 boincer umatlas     15847 Jan 12 15:47 start_atlas.sh
[2026-01-12 17:31:01] -rw-r--r-- 2 boincer umatlas    592401 Jan 12 15:47 input.tar.gz
[2026-01-12 17:31:01] -rw------- 1 boincer umatlas 287179962 Jan 12 17:29 HITS.pool.root.1
[2026-01-12 17:31:01] -rw------- 1 boincer umatlas   1413120 Jan 12 17:31 result.tar.gz
17:31:02 (5097): run_atlas exited; CPU time 67820.049412
17:31:02 (5097): called boinc_finish(0)

</stderr_txt>
]]>

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