Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:45:24 (18709): wrapper (7.7.26015): starting
15:45:24 (18709): wrapper: running run_atlas (--nthreads 12)
[2026-01-12 15:45:24] Arguments: --nthreads 12
[2026-01-12 15:45:24] Threads: 12
[2026-01-12 15:45:24] Checking for CVMFS
[2026-01-12 15:45:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 15:45:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 15:45:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 15:45:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 15:45:24] 2.11.2.0 3009 141125 99376 155065 3 1 19416965 20275201 1 130560 0 50494544 99.877 8480366 39602 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 15:45:24] CVMFS is ok
[2026-01-12 15:45:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 15:45:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 15:45:24] Further information can be found at the LHC@home message board.
[2026-01-12 15:45:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 15:45:24] Checking for apptainer binary...
[2026-01-12 15:45:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 15:45:24] Running /usr/bin/apptainer --version
[2026-01-12 15:45:24] apptainer version 1.3.2-1.el7
[2026-01-12 15:45:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 15:45:26] c-115-42.aglt2.org
[2026-01-12 15:45:26] apptainer works
[2026-01-12 15:45:26] Set ATHENA_PROC_NUMBER=12
[2026-01-12 15:45:26] Set ATHENA_CORE_NUMBER=12
[2026-01-12 15:45:26] Starting ATLAS job with PandaID=6967681984
[2026-01-12 15:45:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 17:20:57]  *** The last 200 lines of the pilot log: ***
[2026-01-12 17:20:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-12 17:20:57]  replicas=None
[2026-01-12 17:20:57]  scope=mc23_13p6TeV
[2026-01-12 17:20:57]  status=None
[2026-01-12 17:20:57]  status_code=0
[2026-01-12 17:20:57]  storage_token=
[2026-01-12 17:20:57]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6967681984/log.48188598._000160.job.log.tgz.1
[2026-01-12 17:20:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5c/e1/log.48188598._000160.job.log.tgz.1
[2026-01-12 17:20:57]  workdir=None
[2026-01-12 17:20:57] ]
[2026-01-12 17:20:57] 2026-01-12 22:20:12,341 | INFO     | transferring file log.48188598._000160.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6967681984/log.48188598._000160.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-12 17:20:57] 2026-01-12 22:20:12,341 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6967681984/log.48188598._000160.job.log.tgz.1 /tmp/boinchome/slots/0/log.48188598._000160.job
[2026-01-12 17:20:57] 2026-01-12 22:20:12,362 | INFO     | adding to output.list: log.48188598._000160.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5c/e1/log.48188598._000160.job.log.tg
[2026-01-12 17:20:57] 2026-01-12 22:20:12,363 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-12 17:20:57] 2026-01-12 22:20:12,363 | INFO     | summary of transferred files:
[2026-01-12 17:20:57] 2026-01-12 22:20:12,364 | INFO     |  -- lfn=log.48188598._000160.job.log.tgz.1, status_code=0, status=transferred
[2026-01-12 17:20:57] 2026-01-12 22:20:12,364 | INFO     | stage-out finished correctly
[2026-01-12 17:20:57] 2026-01-12 22:20:12,761 | INFO     | time since job start (5670s) is within the limit (349056.0s)
[2026-01-12 17:20:57] 2026-01-12 22:20:13,141 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-12 17:20:57] 2026-01-12 22:20:14,231 | INFO     | monitor loop #423: job 0:6967681984 is in state 'finished'
[2026-01-12 17:20:57] 2026-01-12 22:20:14,232 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 17:20:57] 2026-01-12 22:20:14,767 | INFO     | time since job start (5672s) is within the limit (349056.0s)
[2026-01-12 17:20:57] 2026-01-12 22:20:16,202 | INFO     | job 6967681984 has state=finished
[2026-01-12 17:20:57] 2026-01-12 22:20:16,202 | INFO     | preparing for final server update for job 6967681984 in state='finished'
[2026-01-12 17:20:57] 2026-01-12 22:20:16,202 | INFO     | this job has now completed (state=finished)
[2026-01-12 17:20:57] 2026-01-12 22:20:16,203 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-12 17:20:57] 2026-01-12 22:20:16,203 | INFO     | log transfer has been attempted: DONE
[2026-01-12 17:20:57] 2026-01-12 22:20:16,203 | INFO     | job 6967681984 has finished - writing final server update
[2026-01-12 17:20:57] 2026-01-12 22:20:16,203 | INFO     | total number of processed events: 400 (read)
[2026-01-12 17:20:57] 2026-01-12 22:20:16,204 | INFO     | executing command: lscpu
[2026-01-12 17:20:57] 2026-01-12 22:20:16,229 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-12 17:20:57] 2026-01-12 22:20:16,735 | INFO     | monitor loop #424: job 0:6967681984 is in state 'finished'
[2026-01-12 17:20:57] 2026-01-12 22:20:16,735 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 17:20:57] 2026-01-12 22:20:16,773 | INFO     | time since job start (5674s) is within the limit (349056.0s)
[2026-01-12 17:20:57] 2026-01-12 22:20:18,778 | INFO     | time since job start (5676s) is within the limit (349056.0s)
[2026-01-12 17:20:57] 2026-01-12 22:20:19,238 | INFO     | monitor loop #425: job 0:6967681984 is in state 'finished'
[2026-01-12 17:20:57] 2026-01-12 22:20:19,238 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 17:20:57] 2026-01-12 22:20:20,783 | INFO     | time since job start (5678s) is within the limit (349056.0s)
[2026-01-12 17:20:57] 2026-01-12 22:20:20,786 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-12 17:20:57] 2026-01-12 22:20:20,788 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1784.5
[2026-01-12 17:20:57] 2026-01-12 22:20:20,790 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6967681984/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 17:20:57] 2026-01-12 22:20:20,791 | INFO     | extracted standard info from prmon json
[2026-01-12 17:20:57] 2026-01-12 22:20:20,791 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 17:20:57] 2026-01-12 22:20:20,791 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 17:20:57] 2026-01-12 22:20:20,792 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 17:20:57] 2026-01-12 22:20:20,792 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 17:20:57] 2026-01-12 22:20:20,794 | INFO     | fitting pss+swap vs Time
[2026-01-12 17:20:57] 2026-01-12 22:20:20,794 | INFO     | sum of square deviations: 197203697.5
[2026-01-12 17:20:57] 2026-01-12 22:20:20,794 | INFO     | sum of deviations: -9101000652.0
[2026-01-12 17:20:57] 2026-01-12 22:20:20,795 | INFO     | mean x: 1768253667.5
[2026-01-12 17:20:57] 2026-01-12 22:20:20,795 | INFO     | mean y: 2856115.093023256
[2026-01-12 17:20:57] 2026-01-12 22:20:20,795 | INFO     | intersect: 81608211312.9533
[2026-01-12 17:20:57] 2026-01-12 22:20:20,795 | INFO     | chi2: 0.06728067916706847
[2026-01-12 17:20:57] 2026-01-12 22:20:20,795 | INFO     | current memory leak: -46.15 B/s (using 86 data points, chi2=0.07)
[2026-01-12 17:20:57] 2026-01-12 22:20:20,796 | INFO     | could have reported an average CPU frequency of 2307 MHz (7 samples)
[2026-01-12 17:20:57] 2026-01-12 22:20:20,796 | INFO     | ..............................
[2026-01-12 17:20:57] 2026-01-12 22:20:20,796 | INFO     | . Timing measurements:
[2026-01-12 17:20:57] 2026-01-12 22:20:20,796 | INFO     | . get job = 0 s
[2026-01-12 17:20:57] 2026-01-12 22:20:20,796 | INFO     | . initial setup = 2 s
[2026-01-12 17:20:57] 2026-01-12 22:20:20,796 | INFO     | . payload setup = 6 s
[2026-01-12 17:20:57] 2026-01-12 22:20:20,797 | INFO     | . stage-in = 0 s
[2026-01-12 17:20:57] 2026-01-12 22:20:20,797 | INFO     | . payload execution = 5643 s
[2026-01-12 17:20:57] 2026-01-12 22:20:20,797 | INFO     | . stage-out = 0 s
[2026-01-12 17:20:57] 2026-01-12 22:20:20,797 | INFO     | . log creation = 0 s
[2026-01-12 17:20:57] 2026-01-12 22:20:20,797 | INFO     | ..............................
[2026-01-12 17:20:57] 2026-01-12 22:20:21,298 | INFO     | 
[2026-01-12 17:20:57] 2026-01-12 22:20:21,299 | INFO     | job summary report
[2026-01-12 17:20:57] 2026-01-12 22:20:21,299 | INFO     | --------------------------------------------------
[2026-01-12 17:20:57] 2026-01-12 22:20:21,299 | INFO     | PanDA job id: 6967681984
[2026-01-12 17:20:57] 2026-01-12 22:20:21,299 | INFO     | task id: 48188598
[2026-01-12 17:20:57] 2026-01-12 22:20:21,299 | INFO     | errors: (none)
[2026-01-12 17:20:57] 2026-01-12 22:20:21,299 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 17:20:57] 2026-01-12 22:20:21,300 | INFO     | pilot state: finished 
[2026-01-12 17:20:57] 2026-01-12 22:20:21,300 | INFO     | transexitcode: 0
[2026-01-12 17:20:57] 2026-01-12 22:20:21,300 | INFO     | exeerrorcode: 0
[2026-01-12 17:20:57] 2026-01-12 22:20:21,300 | INFO     | exeerrordiag: 
[2026-01-12 17:20:57] 2026-01-12 22:20:21,300 | INFO     | exitcode: 0
[2026-01-12 17:20:57] 2026-01-12 22:20:21,300 | INFO     | exitmsg: OK
[2026-01-12 17:20:57] 2026-01-12 22:20:21,301 | INFO     | cpuconsumptiontime: 62486 s
[2026-01-12 17:20:57] 2026-01-12 22:20:21,301 | INFO     | nevents: 400
[2026-01-12 17:20:57] 2026-01-12 22:20:21,301 | INFO     | neventsw: 0
[2026-01-12 17:20:57] 2026-01-12 22:20:21,301 | INFO     | pid: 29240
[2026-01-12 17:20:57] 2026-01-12 22:20:21,301 | INFO     | pgrp: 29240
[2026-01-12 17:20:57] 2026-01-12 22:20:21,301 | INFO     | corecount: 12
[2026-01-12 17:20:57] 2026-01-12 22:20:21,302 | INFO     | event service: False
[2026-01-12 17:20:57] 2026-01-12 22:20:21,302 | INFO     | sizes: {0: 2283299, 1: 2284155, 6: 2284417, 12: 2284445, 5654: 2311072, 5655: 2320070, 5656: 2320254, 5663: 2320448}
[2026-01-12 17:20:57] 2026-01-12 22:20:21,302 | INFO     | --------------------------------------------------
[2026-01-12 17:20:57] 2026-01-12 22:20:21,302 | INFO     | 
[2026-01-12 17:20:57] 2026-01-12 22:20:21,302 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-12 17:20:57] 2026-01-12 22:20:21,326 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 17:20:57] 2026-01-12 22:20:21,327 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 17:20:57] 2026-01-12 22:20:21,327 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 17:20:57] 2026-01-12 22:20:21,327 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 17:20:57] 2026-01-12 22:20:21,327 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 17:20:57] 2026-01-12 22:20:21,327 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 17:20:57] 2026-01-12 22:20:21,328 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 17:20:57] 2026-01-12 22:20:21,328 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 17:20:57] 2026-01-12 22:20:21,328 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 17:20:57] 2026-01-12 22:20:21,328 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 17:20:57] 2026-01-12 22:20:21,328 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 17:20:57] 2026-01-12 22:20:21,328 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 17:20:57] 2026-01-12 22:20:21,329 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 17:20:57] 2026-01-12 22:20:21,329 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 17:20:57] 2026-01-12 22:20:21,329 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 17:20:57] 2026-01-12 22:20:21,329 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 17:20:57] 2026-01-12 22:20:21,329 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 17:20:57] 2026-01-12 22:20:21,329 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 17:20:57] 2026-01-12 22:20:21,329 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 17:20:57] 2026-01-12 22:20:21,330 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 17:20:57] 2026-01-12 22:20:21,330 | INFO     | job 6967681984 has completed (purged errors)
[2026-01-12 17:20:57] 2026-01-12 22:20:21,330 | INFO     | overall cleanup function is called
[2026-01-12 17:20:57] 2026-01-12 22:20:22,338 | INFO     | --- collectZombieJob: --- 10, [29240]
[2026-01-12 17:20:57] 2026-01-12 22:20:22,339 | INFO     | zombie collector waiting for pid 29240
[2026-01-12 17:20:57] 2026-01-12 22:20:22,352 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 17:20:57] 2026-01-12 22:20:22,353 | INFO     | collected zombie processes
[2026-01-12 17:20:57] 2026-01-12 22:20:22,353 | INFO     | will attempt to kill all subprocesses of pid=29240
[2026-01-12 17:20:57] 2026-01-12 22:20:22,439 | INFO     | process IDs to be killed: [29240] (in reverse order)
[2026-01-12 17:20:57] 2026-01-12 22:20:22,489 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 17:20:57] 2026-01-12 22:20:22,489 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 17:20:57] 2026-01-12 22:20:22,493 | INFO     | did not find any defunct processes belonging to 29240
[2026-01-12 17:20:57] 2026-01-12 22:20:22,496 | INFO     | did not find any defunct processes belonging to 29240
[2026-01-12 17:20:57] 2026-01-12 22:20:22,496 | INFO     | ready for new job
[2026-01-12 17:20:57] 2026-01-12 22:20:22,496 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 17:20:57] 2026-01-12 22:20:22,497 | INFO     | ***************************************
[2026-01-12 17:20:57] 2026-01-12 22:20:22,497 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 17:20:57] 2026-01-12 22:20:22,498 | INFO     | ***************************************
[2026-01-12 17:20:57] 2026-01-12 22:20:22,498 | INFO     | 
[2026-01-12 17:20:57] 2026-01-12 22:20:22,498 | INFO     | architecture information:
[2026-01-12 17:20:57] 2026-01-12 22:20:22,499 | INFO     | executing command: cat /etc/os-release
[2026-01-12 17:20:57] 2026-01-12 22:20:22,512 | INFO     | cat /etc/os-release:
[2026-01-12 17:20:57] NAME="CentOS Linux"
[2026-01-12 17:20:57] VERSION="7 (Core)"
[2026-01-12 17:20:57] ID="centos"
[2026-01-12 17:20:57] ID_LIKE="rhel fedora"
[2026-01-12 17:20:57] VERSION_ID="7"
[2026-01-12 17:20:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 17:20:57] ANSI_COLOR="0;31"
[2026-01-12 17:20:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 17:20:57] HOME_URL="https://www.centos.org/"
[2026-01-12 17:20:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 17:20:57] 
[2026-01-12 17:20:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 17:20:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 17:20:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 17:20:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 17:20:57] 
[2026-01-12 17:20:57] 2026-01-12 22:20:22,512 | INFO     | ***************************************
[2026-01-12 17:20:57] 2026-01-12 22:20:23,015 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-12 17:20:57] 2026-01-12 22:20:23,031 | INFO     | sufficient remaining disk space (18211667968 B)
[2026-01-12 17:20:57] 2026-01-12 22:20:23,031 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 17:20:57] 2026-01-12 22:20:23,032 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 17:20:57] 2026-01-12 22:20:23,032 | INFO     | update_server=False
[2026-01-12 17:20:57] 2026-01-12 22:20:23,032 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 17:20:57] 2026-01-12 22:20:23,032 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 17:20:57] 2026-01-12 22:20:23,033 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 17:20:57] 2026-01-12 22:20:23,033 | INFO     | aborting loop
[2026-01-12 17:20:57] 2026-01-12 22:20:23,049 | INFO     | all data control threads have been joined
[2026-01-12 17:20:57] 2026-01-12 22:20:23,065 | INFO     | all payload control threads have been joined
[2026-01-12 17:20:57] 2026-01-12 22:20:23,362 | INFO     | all job control threads have been joined
[2026-01-12 17:20:57] 2026-01-12 22:20:23,722 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 17:20:57] 2026-01-12 22:20:24,037 | INFO     | [job] retrieve thread has finished
[2026-01-12 17:20:57] 2026-01-12 22:20:24,039 | INFO     | [job] job monitor thread has finished
[2026-01-12 17:20:57] 2026-01-12 22:20:24,050 | INFO     | [data] control thread has finished
[2026-01-12 17:20:57] 2026-01-12 22:20:24,071 | INFO     | [payload] control thread has finished
[2026-01-12 17:20:57] 2026-01-12 22:20:24,301 | INFO     | [payload] failed_post thread has finished
[2026-01-12 17:20:57] 2026-01-12 22:20:24,368 | INFO     | [job] control thread has finished
[2026-01-12 17:20:57] 2026-01-12 22:20:24,489 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 17:20:57] 2026-01-12 22:20:25,026 | INFO     | [job] validate thread has finished
[2026-01-12 17:20:57] 2026-01-12 22:20:25,039 | INFO     | [data] copytool_out thread has finished
[2026-01-12 17:20:57] 2026-01-12 22:20:25,329 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 17:20:57] 2026-01-12 22:20:25,329 | INFO     | [payload] validate_post thread has finished
[2026-01-12 17:20:57] 2026-01-12 22:20:25,474 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 17:20:57] 2026-01-12 22:20:25,509 | INFO     | [data] copytool_in thread has finished
[2026-01-12 17:20:57] 2026-01-12 22:20:25,883 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 17:20:57] 2026-01-12 22:20:26,888 | INFO     | [job] queue monitor thread has finished
[2026-01-12 17:20:57] 2026-01-12 22:20:27,728 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 17:20:57] 2026-01-12 22:20:33,404 | INFO     | job.realtimelogging is not enabled
[2026-01-12 17:20:57] 2026-01-12 22:20:34,409 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 17:20:57] 2026-01-12 22:20:50,608 | INFO     | [monitor] cgroup control has ended
[2026-01-12 17:20:57] 2026-01-12 22:20:52,456 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140656599766848)>', '<ExcThread(monitor, started 140655942690560)>']
[2026-01-12 17:20:57] 2026-01-12 22:20:53,982 | INFO     | PID=22758 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-12 17:20:57] 2026-01-12 22:20:53,982 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 17:20:57] 2026-01-12 22:20:53,982 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 17:20:57] 2026-01-12 22:20:53,983 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 17:20:57] 2026-01-12 22:20:53,983 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 17:20:57] 2026-01-12 22:20:53,983 | INFO     | [monitor] control thread has ended
[2026-01-12 17:20:57] 2026-01-12 22:20:57,457 | INFO     | all workflow threads have been joined
[2026-01-12 17:20:57] 2026-01-12 22:20:57,457 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 17:20:57] 2026-01-12 22:20:57,457 | INFO     | traces error code: 0
[2026-01-12 17:20:57] 2026-01-12 22:20:57,458 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 17:20:57] 2026-01-12 22:20:57,550 [wrapper] ==== pilot stdout END ====
[2026-01-12 17:20:57] 2026-01-12 22:20:57,554 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 17:20:57] 2026-01-12 22:20:57,557 [wrapper] pilotpid: 22758
[2026-01-12 17:20:57] 2026-01-12 22:20:57,561 [wrapper] Pilot exit status: 0
[2026-01-12 17:20:57] 2026-01-12 22:20:57,576 [wrapper] pandaids: 6967681984
[2026-01-12 17:20:57] 2026-01-12 22:20:57,614 [wrapper] cleanup supervisor_pilot  5168 22759
[2026-01-12 17:20:57] 2026-01-12 22:20:57,618 [wrapper] Test setup, not cleaning
[2026-01-12 17:20:57] 2026-01-12 22:20:57,622 [wrapper] apfmon messages muted
[2026-01-12 17:20:57] 2026-01-12 22:20:57,625 [wrapper] ==== wrapper stdout END ====
[2026-01-12 17:20:57] 2026-01-12 22:20:57,629 [wrapper] ==== wrapper stderr END ====
[2026-01-12 17:20:57]  *** Error codes and diagnostics ***
[2026-01-12 17:20:57]     "exeErrorCode": 0,
[2026-01-12 17:20:57]     "exeErrorDiag": "",
[2026-01-12 17:20:57]     "pilotErrorCode": 0,
[2026-01-12 17:20:57]     "pilotErrorDiag": "",
[2026-01-12 17:20:57]  *** Listing of results directory ***
[2026-01-12 17:20:57] total 634888
[2026-01-12 17:20:57] -rw-r--r-- 1 boincer umatlas    579449 Jan 12 15:16 pilot3.tar.gz
[2026-01-12 17:20:57] -rw-r--r-- 1 boincer umatlas      5112 Jan 12 15:41 queuedata.json
[2026-01-12 17:20:57] -rwx------ 1 boincer umatlas     36322 Jan 12 15:41 runpilot2-wrapper.sh
[2026-01-12 17:20:57] -rw-r--r-- 1 boincer umatlas       100 Jan 12 15:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 17:20:57] -rwxr-xr-x 1 boincer umatlas      7986 Jan 12 15:45 run_atlas
[2026-01-12 17:20:57] -rw-r--r-- 1 boincer umatlas       105 Jan 12 15:45 job.xml
[2026-01-12 17:20:57] -rw-r--r-- 2 boincer umatlas 349157938 Jan 12 15:45 EVNT.48188594._000007.pool.root.1
[2026-01-12 17:20:57] -rw-r--r-- 2 boincer umatlas     15847 Jan 12 15:45 start_atlas.sh
[2026-01-12 17:20:57] drwxrwx--x 2 boincer umatlas      4096 Jan 12 15:45 shared
[2026-01-12 17:20:57] -rw-r--r-- 2 boincer umatlas    592410 Jan 12 15:45 input.tar.gz
[2026-01-12 17:20:57] -rw-r--r-- 1 boincer umatlas         0 Jan 12 15:45 boinc_lockfile
[2026-01-12 17:20:57] -rw-r--r-- 1 boincer umatlas      2631 Jan 12 15:45 pandaJob.out
[2026-01-12 17:20:57] -rw------- 1 boincer umatlas        57 Jan 12 15:45 setup.sh.local
[2026-01-12 17:20:57] -rw------- 1 boincer umatlas    988547 Jan 12 15:45 agis_schedconf.cvmfs.json
[2026-01-12 17:20:57] -rw------- 1 boincer umatlas   1516240 Jan 12 15:45 agis_ddmendpoints.agis.ALL.json
[2026-01-12 17:20:57] drwx------ 5 boincer umatlas      4096 Jan 12 15:45 pilot3
[2026-01-12 17:20:57] -rw-r--r-- 1 boincer umatlas      5954 Jan 12 17:19 init_data.xml
[2026-01-12 17:20:57] -rw-r--r-- 1 boincer umatlas       530 Jan 12 17:19 boinc_task_state.xml
[2026-01-12 17:20:57] -rw------- 1 boincer umatlas 294409581 Jan 12 17:19 HITS.48188598._000160.pool.root.1
[2026-01-12 17:20:57] -rw------- 1 boincer umatlas        95 Jan 12 17:19 pilot_heartbeat.json
[2026-01-12 17:20:57] -rw------- 1 boincer umatlas      1060 Jan 12 17:20 memory_monitor_summary.json
[2026-01-12 17:20:57] -rw------- 1 boincer umatlas    507116 Jan 12 17:20 log.48188598._000160.job.log.tgz.1
[2026-01-12 17:20:57] -rw------- 1 boincer umatlas      7857 Jan 12 17:20 heartbeat.json
[2026-01-12 17:20:57] -rw-r--r-- 1 boincer umatlas      8192 Jan 12 17:20 boinc_mmap_file
[2026-01-12 17:20:57] -rw-r--r-- 1 boincer umatlas        27 Jan 12 17:20 wrapper_checkpoint.txt
[2026-01-12 17:20:57] -rw------- 1 boincer umatlas      4818 Jan 12 17:20 pilotlog.txt
[2026-01-12 17:20:57] -rw------- 1 boincer umatlas    812704 Jan 12 17:20 log.48188598._000160.job.log.1
[2026-01-12 17:20:57] -rw------- 1 boincer umatlas       357 Jan 12 17:20 output.list
[2026-01-12 17:20:57] -rw-r--r-- 1 boincer umatlas       620 Jan 12 17:20 runtime_log
[2026-01-12 17:20:57] -rw------- 1 boincer umatlas   1341440 Jan 12 17:20 result.tar.gz
[2026-01-12 17:20:57] -rw------- 1 boincer umatlas       659 Jan 12 17:20 UmLNDm8tdz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmX0hKDmtZJAmn.diag
[2026-01-12 17:20:57] -rw-r--r-- 1 boincer umatlas      9344 Jan 12 17:20 runtime_log.err
[2026-01-12 17:20:57] -rw-r--r-- 1 boincer umatlas     21899 Jan 12 17:20 stderr.txt
[2026-01-12 17:20:57] HITS file was successfully produced:
[2026-01-12 17:20:57] -rw------- 1 boincer umatlas 294409581 Jan 12 17:19 shared/HITS.pool.root.1
[2026-01-12 17:20:57]  *** Contents of shared directory: ***
[2026-01-12 17:20:57] total 630400
[2026-01-12 17:20:57] -rw-r--r-- 2 boincer umatlas 349157938 Jan 12 15:45 ATLAS.root_0
[2026-01-12 17:20:57] -rw-r--r-- 2 boincer umatlas     15847 Jan 12 15:45 start_atlas.sh
[2026-01-12 17:20:57] -rw-r--r-- 2 boincer umatlas    592410 Jan 12 15:45 input.tar.gz
[2026-01-12 17:20:57] -rw------- 1 boincer umatlas 294409581 Jan 12 17:19 HITS.pool.root.1
[2026-01-12 17:20:57] -rw------- 1 boincer umatlas   1341440 Jan 12 17:20 result.tar.gz
17:20:59 (18709): run_atlas exited; CPU time 62431.877802
17:20:59 (18709): called boinc_finish(0)

</stderr_txt>
]]>

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