Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:49:56 (6438): wrapper (7.7.26015): starting
21:49:56 (6438): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 21:49:56] Arguments: --nthreads 8
[2026-01-12 21:49:56] Threads: 8
[2026-01-12 21:49:56] Checking for CVMFS
[2026-01-12 21:49:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 21:50:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 21:50:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 21:50:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 21:50:01] 2.11.2.0 24551 40236 126988 155065 1 11 13690719 25165824 96 130560 0 16209348 99.796 11296641 3293 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-12 21:50:01] CVMFS is ok
[2026-01-12 21:50:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 21:50:01] Checking for apptainer binary...
[2026-01-12 21:50:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 21:50:01] Running /usr/bin/apptainer --version
[2026-01-12 21:50:01] apptainer version 1.3.2-1.el7
[2026-01-12 21:50:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 21:50:11] cg-vwn415.simple-grid.lan
[2026-01-12 21:50:11] apptainer works
[2026-01-12 21:50:12] Set ATHENA_PROC_NUMBER=8
[2026-01-12 21:50:12] Set ATHENA_CORE_NUMBER=8
[2026-01-12 21:50:12] Starting ATLAS job with PandaID=6967681962
[2026-01-12 21:50:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 04:00:10]  *** The last 200 lines of the pilot log: ***
[2026-01-13 04:00:10] 2026-01-13 02:59:01,616 | INFO     | time since job start (21880s) is within the limit (349056.0s)
[2026-01-13 04:00:10] 2026-01-13 02:59:02,620 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 04:00:10] 2026-01-13 02:59:02,621 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-13 04:00:10] 2026-01-13 02:59:02,623 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6967681962/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 04:00:10] 2026-01-13 02:59:02,624 | INFO     | extracted standard info from prmon json
[2026-01-13 04:00:10] 2026-01-13 02:59:02,624 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 04:00:10] 2026-01-13 02:59:02,624 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 04:00:10] 2026-01-13 02:59:02,624 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 04:00:10] 2026-01-13 02:59:02,625 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 04:00:10] 2026-01-13 02:59:02,632 | INFO     | fitting pss+swap vs Time
[2026-01-13 04:00:10] 2026-01-13 02:59:02,633 | INFO     | sum of square deviations: 13068103627.0
[2026-01-13 04:00:10] 2026-01-13 02:59:02,637 | INFO     | sum of deviations: 229334115473.5
[2026-01-13 04:00:10] 2026-01-13 02:59:02,638 | INFO     | mean x: 1768262392.5
[2026-01-13 04:00:10] 2026-01-13 02:59:02,638 | INFO     | mean y: 2507759.6810344825
[2026-01-13 04:00:10] 2026-01-13 02:59:02,638 | INFO     | intersect: -31028994842.669914
[2026-01-13 04:00:10] 2026-01-13 02:59:02,638 | INFO     | chi2: 8.403555433666913
[2026-01-13 04:00:10] 2026-01-13 02:59:02,639 | INFO     | sum of square deviations: 12512874612.0
[2026-01-13 04:00:10] 2026-01-13 02:59:02,643 | INFO     | sum of deviations: 249366747182.00003
[2026-01-13 04:00:10] 2026-01-13 02:59:02,643 | INFO     | mean x: 1768262240.0
[2026-01-13 04:00:10] 2026-01-13 02:59:02,643 | INFO     | mean y: 2513186.4023323613
[2026-01-13 04:00:10] 2026-01-13 02:59:02,644 | INFO     | intersect: -35236855593.86856
[2026-01-13 04:00:10] 2026-01-13 02:59:02,644 | INFO     | chi2: 7.686135058958859
[2026-01-13 04:00:10] 2026-01-13 02:59:02,644 | INFO     | current chi2=7.686135058958859 (change=8.53710528086569 %)
[2026-01-13 04:00:10] 2026-01-13 02:59:02,644 | INFO     | right removable region: 342
[2026-01-13 04:00:10] 2026-01-13 02:59:02,645 | INFO     | sum of square deviations: 12512874612.0
[2026-01-13 04:00:10] 2026-01-13 02:59:02,649 | INFO     | sum of deviations: 102858014499.00003
[2026-01-13 04:00:10] 2026-01-13 02:59:02,649 | INFO     | mean x: 1768262545.0
[2026-01-13 04:00:10] 2026-01-13 02:59:02,649 | INFO     | mean y: 2542484.588921283
[2026-01-13 04:00:10] 2026-01-13 02:59:02,649 | INFO     | intersect: -14532884436.19422
[2026-01-13 04:00:10] 2026-01-13 02:59:02,650 | INFO     | chi2: 3.4494826960551066
[2026-01-13 04:00:10] 2026-01-13 02:59:02,650 | INFO     | current chi2=3.4494826960551066 (change=58.95210398404053 %)
[2026-01-13 04:00:10] 2026-01-13 02:59:02,651 | INFO     | sum of square deviations: 11973599384.5
[2026-01-13 04:00:10] 2026-01-13 02:59:02,655 | INFO     | sum of deviations: 11290163588.999996
[2026-01-13 04:00:10] 2026-01-13 02:59:02,655 | INFO     | mean x: 1768262697.5
[2026-01-13 04:00:10] 2026-01-13 02:59:02,655 | INFO     | mean y: 2568346.5325443787
[2026-01-13 04:00:10] 2026-01-13 02:59:02,655 | INFO     | intersect: -1664764464.764372
[2026-01-13 04:00:10] 2026-01-13 02:59:02,656 | INFO     | chi2: 0.9765949034911398
[2026-01-13 04:00:10] 2026-01-13 02:59:02,656 | INFO     | current chi2=0.9765949034911398 (change=71.68865625538601 %)
[2026-01-13 04:00:10] 2026-01-13 02:59:02,657 | INFO     | sum of square deviations: 11450045382.0
[2026-01-13 04:00:10] 2026-01-13 02:59:02,660 | INFO     | sum of deviations: -9195959047.000002
[2026-01-13 04:00:10] 2026-01-13 02:59:02,661 | INFO     | mean x: 1768262850.0
[2026-01-13 04:00:10] 2026-01-13 02:59:02,661 | INFO     | mean y: 2574305.681681682
[2026-01-13 04:00:10] 2026-01-13 02:59:02,661 | INFO     | intersect: 1422732236.1030188
[2026-01-13 04:00:10] 2026-01-13 02:59:02,661 | INFO     | chi2: 0.8508051792173221
[2026-01-13 04:00:10] 2026-01-13 02:59:02,662 | INFO     | current chi2=0.8508051792173221 (change=12.88044037749362 %)
[2026-01-13 04:00:10] 2026-01-13 02:59:02,662 | INFO     | left removable region: 30
[2026-01-13 04:00:10] 2026-01-13 02:59:02,662 | INFO     | sum of square deviations: 9417545878.0
[2026-01-13 04:00:10] 2026-01-13 02:59:02,666 | INFO     | sum of deviations: -2169082591.0000024
[2026-01-13 04:00:10] 2026-01-13 02:59:02,666 | INFO     | mean x: 1768263124.5
[2026-01-13 04:00:10] 2026-01-13 02:59:02,666 | INFO     | mean y: 2585810.9294871795
[2026-01-13 04:00:10] 2026-01-13 02:59:02,666 | INFO     | intersect: 409858449.6134375
[2026-01-13 04:00:10] 2026-01-13 02:59:02,667 | INFO     | chi2: 0.010362234524061181
[2026-01-13 04:00:10] 2026-01-13 02:59:02,667 | INFO     | current memory leak: -0.23 B/s (using 312 data points, chi2=0.01)
[2026-01-13 04:00:10] 2026-01-13 02:59:02,668 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-13 04:00:10] 2026-01-13 02:59:02,668 | INFO     | ..............................
[2026-01-13 04:00:10] 2026-01-13 02:59:02,668 | INFO     | . Timing measurements:
[2026-01-13 04:00:10] 2026-01-13 02:59:02,668 | INFO     | . get job = 0 s
[2026-01-13 04:00:10] 2026-01-13 02:59:02,668 | INFO     | . initial setup = 10 s
[2026-01-13 04:00:10] 2026-01-13 02:59:02,668 | INFO     | . payload setup = 168 s
[2026-01-13 04:00:10] 2026-01-13 02:59:02,668 | INFO     | . stage-in = 0 s
[2026-01-13 04:00:10] 2026-01-13 02:59:02,668 | INFO     | . payload execution = 21375 s
[2026-01-13 04:00:10] 2026-01-13 02:59:02,669 | INFO     | . stage-out = 4 s
[2026-01-13 04:00:10] 2026-01-13 02:59:02,669 | INFO     | . log creation = 1 s
[2026-01-13 04:00:10] 2026-01-13 02:59:02,669 | INFO     | ..............................
[2026-01-13 04:00:10] 2026-01-13 02:59:02,794 | INFO     | 
[2026-01-13 04:00:10] 2026-01-13 02:59:02,795 | INFO     | job summary report
[2026-01-13 04:00:10] 2026-01-13 02:59:02,795 | INFO     | --------------------------------------------------
[2026-01-13 04:00:10] 2026-01-13 02:59:02,795 | INFO     | PanDA job id: 6967681962
[2026-01-13 04:00:10] 2026-01-13 02:59:02,795 | INFO     | task id: 48188598
[2026-01-13 04:00:10] 2026-01-13 02:59:02,795 | INFO     | errors: (none)
[2026-01-13 04:00:10] 2026-01-13 02:59:02,795 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 04:00:10] 2026-01-13 02:59:02,795 | INFO     | pilot state: finished 
[2026-01-13 04:00:10] 2026-01-13 02:59:02,795 | INFO     | transexitcode: 0
[2026-01-13 04:00:10] 2026-01-13 02:59:02,796 | INFO     | exeerrorcode: 0
[2026-01-13 04:00:10] 2026-01-13 02:59:02,796 | INFO     | exeerrordiag: 
[2026-01-13 04:00:10] 2026-01-13 02:59:02,796 | INFO     | exitcode: 0
[2026-01-13 04:00:10] 2026-01-13 02:59:02,796 | INFO     | exitmsg: OK
[2026-01-13 04:00:10] 2026-01-13 02:59:02,796 | INFO     | cpuconsumptiontime: 80112 s
[2026-01-13 04:00:10] 2026-01-13 02:59:02,796 | INFO     | nevents: 400
[2026-01-13 04:00:10] 2026-01-13 02:59:02,796 | INFO     | neventsw: 0
[2026-01-13 04:00:10] 2026-01-13 02:59:02,796 | INFO     | pid: 16921
[2026-01-13 04:00:10] 2026-01-13 02:59:02,796 | INFO     | pgrp: 16921
[2026-01-13 04:00:10] 2026-01-13 02:59:02,797 | INFO     | corecount: 8
[2026-01-13 04:00:10] 2026-01-13 02:59:02,797 | INFO     | event service: False
[2026-01-13 04:00:10] 2026-01-13 02:59:02,797 | INFO     | sizes: {0: 2283299, 1: 2284155, 2: 2284183, 12: 2284183, 23: 2284211, 34: 2284239, 45: 2284395, 55: 2284423, 66: 2284451, 77: 2284479, 88: 2284535, 98: 2284843, 10
[2026-01-13 04:00:10] 2026-01-13 02:59:02,797 | INFO     | --------------------------------------------------
[2026-01-13 04:00:10] 2026-01-13 02:59:02,797 | INFO     | 
[2026-01-13 04:00:10] 2026-01-13 02:59:02,797 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-01-13 04:00:10] 2026-01-13 02:59:03,384 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 04:00:10] 2026-01-13 02:59:03,384 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 04:00:10] 2026-01-13 02:59:03,384 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 04:00:10] 2026-01-13 02:59:03,385 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 04:00:10] 2026-01-13 02:59:03,385 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 04:00:10] 2026-01-13 02:59:03,385 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 04:00:10] 2026-01-13 02:59:03,385 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 04:00:10] 2026-01-13 02:59:03,385 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 04:00:10] 2026-01-13 02:59:03,385 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 04:00:10] 2026-01-13 02:59:03,385 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 04:00:10] 2026-01-13 02:59:03,386 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 04:00:10] 2026-01-13 02:59:03,386 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 04:00:10] 2026-01-13 02:59:03,386 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 04:00:10] 2026-01-13 02:59:03,386 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 04:00:10] 2026-01-13 02:59:03,386 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 04:00:10] 2026-01-13 02:59:03,386 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 04:00:10] 2026-01-13 02:59:03,386 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 04:00:10] 2026-01-13 02:59:03,386 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 04:00:10] 2026-01-13 02:59:03,386 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 04:00:10] 2026-01-13 02:59:03,387 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 04:00:10] 2026-01-13 02:59:03,387 | INFO     | job 6967681962 has completed (purged errors)
[2026-01-13 04:00:10] 2026-01-13 02:59:03,387 | INFO     | overall cleanup function is called
[2026-01-13 04:00:10] 2026-01-13 02:59:04,396 | INFO     | --- collectZombieJob: --- 10, [16921]
[2026-01-13 04:00:10] 2026-01-13 02:59:04,397 | INFO     | zombie collector waiting for pid 16921
[2026-01-13 04:00:10] 2026-01-13 02:59:04,397 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 04:00:10] 2026-01-13 02:59:04,397 | INFO     | collected zombie processes
[2026-01-13 04:00:10] 2026-01-13 02:59:04,397 | INFO     | will attempt to kill all subprocesses of pid=16921
[2026-01-13 04:00:10] 2026-01-13 02:59:04,507 | INFO     | process IDs to be killed: [16921] (in reverse order)
[2026-01-13 04:00:10] 2026-01-13 02:59:05,257 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 04:00:10] 2026-01-13 02:59:05,258 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 04:00:10] 2026-01-13 02:59:05,260 | INFO     | did not find any defunct processes belonging to 16921
[2026-01-13 04:00:10] 2026-01-13 02:59:05,262 | INFO     | did not find any defunct processes belonging to 16921
[2026-01-13 04:00:10] 2026-01-13 02:59:05,262 | INFO     | ready for new job
[2026-01-13 04:00:10] 2026-01-13 02:59:05,263 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 04:00:10] 2026-01-13 02:59:05,265 | INFO     | ***************************************
[2026-01-13 04:00:10] 2026-01-13 02:59:05,265 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 04:00:10] 2026-01-13 02:59:05,265 | INFO     | ***************************************
[2026-01-13 04:00:10] 2026-01-13 02:59:05,265 | INFO     | 
[2026-01-13 04:00:10] 2026-01-13 02:59:05,266 | INFO     | pilot is running in a VM
[2026-01-13 04:00:10] 2026-01-13 02:59:05,266 | INFO     | architecture information:
[2026-01-13 04:00:10] 2026-01-13 02:59:05,278 | INFO     | executing command: cat /etc/os-release
[2026-01-13 04:00:10] 2026-01-13 02:59:05,552 | INFO     | cat /etc/os-release:
[2026-01-13 04:00:10] NAME="CentOS Linux"
[2026-01-13 04:00:10] VERSION="7 (Core)"
[2026-01-13 04:00:10] ID="centos"
[2026-01-13 04:00:10] ID_LIKE="rhel fedora"
[2026-01-13 04:00:10] VERSION_ID="7"
[2026-01-13 04:00:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 04:00:10] ANSI_COLOR="0;31"
[2026-01-13 04:00:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 04:00:10] HOME_URL="https://www.centos.org/"
[2026-01-13 04:00:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 04:00:10] 
[2026-01-13 04:00:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 04:00:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 04:00:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 04:00:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 04:00:10] 
[2026-01-13 04:00:10] 2026-01-13 02:59:05,552 | INFO     | ***************************************
[2026-01-13 04:00:10] 2026-01-13 02:59:06,056 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-01-13 04:00:10] 2026-01-13 02:59:06,333 | INFO     | sufficient remaining disk space (495024340992 B)
[2026-01-13 04:00:10] 2026-01-13 02:59:06,333 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 04:00:10] 2026-01-13 02:59:06,334 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 04:00:10] 2026-01-13 02:59:06,334 | INFO     | update_server=False
[2026-01-13 04:00:10] 2026-01-13 02:59:06,334 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 04:00:10] 2026-01-13 02:59:06,355 | INFO     | all job control threads have been joined
[2026-01-13 04:00:10] 2026-01-13 02:59:06,392 | INFO     | all data control threads have been joined
[2026-01-13 04:00:10] 2026-01-13 02:59:06,926 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 04:00:10] 2026-01-13 02:59:06,927 | INFO     | aborting loop
[2026-01-13 04:00:10] 2026-01-13 02:59:07,056 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 04:00:10] 2026-01-13 02:59:07,340 | INFO     | [job] retrieve thread has finished
[2026-01-13 04:00:10] 2026-01-13 02:59:07,362 | INFO     | [job] control thread has finished
[2026-01-13 04:00:10] 2026-01-13 02:59:07,379 | INFO     | [payload] validate_post thread has finished
[2026-01-13 04:00:10] 2026-01-13 02:59:07,399 | INFO     | [data] control thread has finished
[2026-01-13 04:00:10] 2026-01-13 02:59:07,605 | INFO     | [data] copytool_in thread has finished
[2026-01-13 04:00:10] 2026-01-13 02:59:07,739 | INFO     | all payload control threads have been joined
[2026-01-13 04:00:10] 2026-01-13 02:59:07,812 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 04:00:10] 2026-01-13 02:59:07,933 | INFO     | [job] job monitor thread has finished
[2026-01-13 04:00:10] 2026-01-13 02:59:07,967 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 04:00:10] 2026-01-13 02:59:08,217 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 04:00:10] 2026-01-13 02:59:08,240 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 04:00:10] 2026-01-13 02:59:08,649 | INFO     | [payload] failed_post thread has finished
[2026-01-13 04:00:10] 2026-01-13 02:59:08,684 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 04:00:10] 2026-01-13 02:59:08,696 | INFO     | [job] validate thread has finished
[2026-01-13 04:00:10] 2026-01-13 02:59:08,746 | INFO     | [payload] control thread has finished
[2026-01-13 04:00:10] 2026-01-13 02:59:08,819 | INFO     | [job] queue monitor thread has finished
[2026-01-13 04:00:10] 2026-01-13 02:59:09,063 | INFO     | [data] copytool_out thread has finished
[2026-01-13 04:00:10] 2026-01-13 02:59:09,387 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 04:00:10] 2026-01-13 02:59:13,397 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 04:00:10] 2026-01-13 02:59:34,792 | INFO     | PID=10466 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-13 04:00:10] 2026-01-13 02:59:34,792 | INFO     | .. there are 2 such processes running
[2026-01-13 04:00:10] 2026-01-13 02:59:34,792 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 04:00:10] 2026-01-13 02:59:34,792 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 04:00:10] 2026-01-13 02:59:34,792 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 04:00:10] 2026-01-13 02:59:58,796 | INFO     | [monitor] cgroup control has ended
[2026-01-13 04:00:10] 2026-01-13 02:59:59,939 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140459852334912)>', '<ExcThread(monitor, started 140458978174720)>']
[2026-01-13 04:00:10] 2026-01-13 02:59:59,941 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 04:00:10] 2026-01-13 02:59:59,942 | INFO     | [monitor] control thread has ended
[2026-01-13 04:00:10] 2026-01-13 03:00:04,964 | INFO     | all workflow threads have been joined
[2026-01-13 04:00:10] 2026-01-13 03:00:04,965 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 04:00:10] 2026-01-13 03:00:04,965 | INFO     | traces error code: 0
[2026-01-13 04:00:10] 2026-01-13 03:00:04,965 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 04:00:10] 2026-01-13 03:00:05,370 [wrapper] ==== pilot stdout END ====
[2026-01-13 04:00:10] 2026-01-13 03:00:05,431 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 04:00:10] 2026-01-13 03:00:05,550 [wrapper] pilotpid: 10466
[2026-01-13 04:00:10] 2026-01-13 03:00:05,688 [wrapper] Pilot exit status: 0
[2026-01-13 04:00:10] 2026-01-13 03:00:06,279 [wrapper] pandaids: 6967681962
[2026-01-13 04:00:10] 2026-01-13 03:00:07,440 [wrapper] cleanup supervisor_pilot 16312 10467
[2026-01-13 04:00:10] 2026-01-13 03:00:07,558 [wrapper] Test setup, not cleaning
[2026-01-13 04:00:10] 2026-01-13 03:00:07,647 [wrapper] apfmon messages muted
[2026-01-13 04:00:10] 2026-01-13 03:00:07,693 [wrapper] ==== wrapper stdout END ====
[2026-01-13 04:00:10] 2026-01-13 03:00:07,775 [wrapper] ==== wrapper stderr END ====
[2026-01-13 04:00:10]  *** Error codes and diagnostics ***
[2026-01-13 04:00:10]     "exeErrorCode": 0,
[2026-01-13 04:00:10]     "exeErrorDiag": "",
[2026-01-13 04:00:10]     "pilotErrorCode": 0,
[2026-01-13 04:00:10]     "pilotErrorDiag": "",
[2026-01-13 04:00:10]  *** Listing of results directory ***
[2026-01-13 04:00:10] total 638264
[2026-01-13 04:00:10] -rw-r--r--. 1 boinc boinc    579449 Jan 12 21:16 pilot3.tar.gz
[2026-01-13 04:00:10] -rw-r--r--. 1 boinc boinc      5112 Jan 12 21:41 queuedata.json
[2026-01-13 04:00:10] -rwx------. 1 boinc boinc     36322 Jan 12 21:41 runpilot2-wrapper.sh
[2026-01-13 04:00:10] -rw-r--r--. 1 boinc boinc       100 Jan 12 21:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 04:00:10] -rwxr-xr-x. 1 boinc boinc      7986 Jan 12 21:49 run_atlas
[2026-01-13 04:00:10] -rw-r--r--. 1 boinc boinc       105 Jan 12 21:49 job.xml
[2026-01-13 04:00:10] -rw-r--r--. 2 boinc boinc 350754182 Jan 12 21:49 EVNT.48188594._000006.pool.root.1
[2026-01-13 04:00:10] -rw-r--r--. 2 boinc boinc    592406 Jan 12 21:49 input.tar.gz
[2026-01-13 04:00:10] -rw-r--r--. 1 boinc boinc      6391 Jan 12 21:49 init_data.xml
[2026-01-13 04:00:10] -rw-r--r--. 2 boinc boinc     15847 Jan 12 21:49 start_atlas.sh
[2026-01-13 04:00:10] drwxrwx--x. 2 boinc boinc        68 Jan 12 21:49 shared
[2026-01-13 04:00:10] -rw-r--r--. 1 boinc boinc         0 Jan 12 21:49 boinc_lockfile
[2026-01-13 04:00:10] -rw-r--r--. 1 boinc boinc      2631 Jan 12 21:50 pandaJob.out
[2026-01-13 04:00:10] -rw-------. 1 boinc boinc    988547 Jan 12 21:54 agis_schedconf.cvmfs.json
[2026-01-13 04:00:10] drwx------. 5 boinc boinc      4096 Jan 12 21:54 pilot3
[2026-01-13 04:00:10] -rw-------. 1 boinc boinc 291776289 Jan 13 03:55 HITS.48188598._000138.pool.root.1
[2026-01-13 04:00:10] -rw-r--r--. 1 boinc boinc       532 Jan 13 03:55 boinc_task_state.xml
[2026-01-13 04:00:10] -rw-------. 1 boinc boinc      1015 Jan 13 03:56 memory_monitor_summary.json
[2026-01-13 04:00:10] -rw-------. 1 boinc boinc   1516240 Jan 13 03:57 agis_ddmendpoints.agis.ALL.json
[2026-01-13 04:00:10] -rw-------. 1 boinc boinc    661860 Jan 13 03:57 log.48188598._000138.job.log.tgz.1
[2026-01-13 04:00:10] -rw-------. 1 boinc boinc        95 Jan 13 03:58 pilot_heartbeat.json
[2026-01-13 04:00:10] -rw-------. 1 boinc boinc      7772 Jan 13 03:59 heartbeat.json
[2026-01-13 04:00:10] -rw-------. 1 boinc boinc      4884 Jan 13 04:00 pilotlog.txt
[2026-01-13 04:00:10] -rw-------. 1 boinc boinc   2913343 Jan 13 04:00 log.48188598._000138.job.log.1
[2026-01-13 04:00:10] -rw-r--r--. 1 boinc boinc        28 Jan 13 04:00 wrapper_checkpoint.txt
[2026-01-13 04:00:10] -rw-r--r--. 1 boinc boinc      8192 Jan 13 04:00 boinc_mmap_file
[2026-01-13 04:00:10] -rw-------. 1 boinc boinc       357 Jan 13 04:00 output.list
[2026-01-13 04:00:10] -rw-r--r--. 1 boinc boinc       620 Jan 13 04:00 runtime_log
[2026-01-13 04:00:10] -rw-------. 1 boinc boinc   3594240 Jan 13 04:00 result.tar.gz
[2026-01-13 04:00:10] -rw-------. 1 boinc boinc       657 Jan 13 04:00 vDsMDm8tdz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmC0hKDmJGg5Gn.diag
[2026-01-13 04:00:10] -rw-r--r--. 1 boinc boinc      8817 Jan 13 04:00 runtime_log.err
[2026-01-13 04:00:10] -rw-r--r--. 1 boinc boinc     20784 Jan 13 04:00 stderr.txt
[2026-01-13 04:00:10] HITS file was successfully produced:
[2026-01-13 04:00:10] -rw-------. 1 boinc boinc 291776289 Jan 13 03:55 shared/HITS.pool.root.1
[2026-01-13 04:00:10]  *** Contents of shared directory: ***
[2026-01-13 04:00:10] total 631584
[2026-01-13 04:00:10] -rw-r--r--. 2 boinc boinc 350754182 Jan 12 21:49 ATLAS.root_0
[2026-01-13 04:00:10] -rw-r--r--. 2 boinc boinc    592406 Jan 12 21:49 input.tar.gz
[2026-01-13 04:00:10] -rw-r--r--. 2 boinc boinc     15847 Jan 12 21:49 start_atlas.sh
[2026-01-13 04:00:10] -rw-------. 1 boinc boinc 291776289 Jan 13 03:55 HITS.pool.root.1
[2026-01-13 04:00:10] -rw-------. 1 boinc boinc   3594240 Jan 13 04:00 result.tar.gz
04:00:12 (6438): run_atlas exited; CPU time 80332.315482
04:00:12 (6438): called boinc_finish(0)

</stderr_txt>
]]>

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