Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:54:47 (682272): wrapper (7.7.26015): starting
15:54:47 (682272): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 15:54:47] Arguments: --nthreads 8
[2026-01-12 15:54:47] Threads: 8
[2026-01-12 15:54:47] Checking for CVMFS
[2026-01-12 15:54:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 15:54:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 15:54:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 15:54:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 15:54:49] 2.13.3.0 12213 98237 239624 155065 0 456 24708336 40960001 28988 16776704 0 723994538 99.690 589332530 35850 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 15:54:49] CVMFS is ok
[2026-01-12 15:54:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 15:54:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 15:54:49] Further information can be found at the LHC@home message board.
[2026-01-12 15:54:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 15:54:49] Checking for apptainer binary...
[2026-01-12 15:54:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 15:54:49] Running /usr/bin/apptainer --version
[2026-01-12 15:54:49] apptainer version 1.4.5-2.el9
[2026-01-12 15:54:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 15:54:49] c7-3-35.aglt2.org
[2026-01-12 15:54:49] apptainer works
[2026-01-12 15:54:49] Set ATHENA_PROC_NUMBER=8
[2026-01-12 15:54:49] Set ATHENA_CORE_NUMBER=8
[2026-01-12 15:54:49] Starting ATLAS job with PandaID=6967681832
[2026-01-12 15:54:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 23:05:45]  *** The last 200 lines of the pilot log: ***
[2026-01-12 23:05:45] 2026-01-13 04:05:09,798 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 23:05:45] 2026-01-13 04:05:09,805 | INFO     | fitting pss+swap vs Time
[2026-01-12 23:05:45] 2026-01-13 04:05:09,805 | INFO     | sum of square deviations: 23137679315.392002
[2026-01-12 23:05:45] 2026-01-13 04:05:09,808 | INFO     | sum of deviations: 106772804814.52968
[2026-01-12 23:05:45] 2026-01-13 04:05:09,808 | INFO     | mean x: 1768264225.0380046
[2026-01-12 23:05:45] 2026-01-13 04:05:09,808 | INFO     | mean y: 2593633.1543942993
[2026-01-12 23:05:45] 2026-01-13 04:05:09,809 | INFO     | intersect: -8157366075.289673
[2026-01-12 23:05:45] 2026-01-13 04:05:09,809 | INFO     | chi2: 5.323680386670128
[2026-01-12 23:05:45] 2026-01-13 04:05:09,809 | INFO     | sum of square deviations: 22323045665.38457
[2026-01-12 23:05:45] 2026-01-13 04:05:09,813 | INFO     | sum of deviations: 162481913766.1539
[2026-01-12 23:05:45] 2026-01-13 04:05:09,813 | INFO     | mean x: 1768264072.5384614
[2026-01-12 23:05:45] 2026-01-13 04:05:09,814 | INFO     | mean y: 2603985.3341346155
[2026-01-12 23:05:45] 2026-01-13 04:05:09,814 | INFO     | intersect: -12867993282.470753
[2026-01-12 23:05:45] 2026-01-13 04:05:09,814 | INFO     | chi2: 3.8680094052668785
[2026-01-12 23:05:45] 2026-01-13 04:05:09,814 | INFO     | current chi2=3.8680094052668785 (change=27.343320328697406 %)
[2026-01-12 23:05:45] 2026-01-13 04:05:09,815 | INFO     | sum of square deviations: 21527761215.377235
[2026-01-12 23:05:45] 2026-01-13 04:05:09,818 | INFO     | sum of deviations: 160021767127.89038
[2026-01-12 23:05:45] 2026-01-13 04:05:09,818 | INFO     | mean x: 1768263920.0389295
[2026-01-12 23:05:45] 2026-01-13 04:05:09,819 | INFO     | mean y: 2603513.569343066
[2026-01-12 23:05:45] 2026-01-13 04:05:09,819 | INFO     | intersect: -13141388302.495668
[2026-01-12 23:05:45] 2026-01-13 04:05:09,819 | INFO     | chi2: 3.8695040599621406
[2026-01-12 23:05:45] 2026-01-13 04:05:09,819 | INFO     | current chi2=3.8695040599621406 (change=-0.03864144418126057 %)
[2026-01-12 23:05:45] 2026-01-13 04:05:09,819 | INFO     | right removable region: 410
[2026-01-12 23:05:45] 2026-01-13 04:05:09,820 | INFO     | sum of square deviations: 22323035905.384563
[2026-01-12 23:05:45] 2026-01-13 04:05:09,823 | INFO     | sum of deviations: -28383374747.923065
[2026-01-12 23:05:45] 2026-01-13 04:05:09,823 | INFO     | mean x: 1768264377.5384614
[2026-01-12 23:05:45] 2026-01-13 04:05:09,824 | INFO     | mean y: 2618903.5264423075
[2026-01-12 23:05:45] 2026-01-13 04:05:09,824 | INFO     | intersect: 2250938114.8471055
[2026-01-12 23:05:45] 2026-01-13 04:05:09,824 | INFO     | chi2: 1.8223430891358925
[2026-01-12 23:05:45] 2026-01-13 04:05:09,824 | INFO     | current chi2=1.8223430891358925 (change=65.76911165255477 %)
[2026-01-12 23:05:45] 2026-01-13 04:05:09,825 | INFO     | sum of square deviations: 21527741695.377235
[2026-01-12 23:05:45] 2026-01-13 04:05:09,828 | INFO     | sum of deviations: -53177765006.07301
[2026-01-12 23:05:45] 2026-01-13 04:05:09,828 | INFO     | mean x: 1768264530.0389295
[2026-01-12 23:05:45] 2026-01-13 04:05:09,828 | INFO     | mean y: 2623629.3795620436
[2026-01-12 23:05:45] 2026-01-13 04:05:09,828 | INFO     | intersect: 4370585535.350237
[2026-01-12 23:05:45] 2026-01-13 04:05:09,829 | INFO     | chi2: 1.6076901888656339
[2026-01-12 23:05:45] 2026-01-13 04:05:09,829 | INFO     | current chi2=1.6076901888656339 (change=11.77895104110398 %)
[2026-01-12 23:05:45] 2026-01-13 04:05:09,829 | INFO     | left removable region: 20
[2026-01-12 23:05:45] 2026-01-13 04:05:09,829 | INFO     | sum of square deviations: 18393572278.8436
[2026-01-12 23:05:45] 2026-01-13 04:05:09,833 | INFO     | sum of deviations: 26250852338.47179
[2026-01-12 23:05:45] 2026-01-13 04:05:09,833 | INFO     | mean x: 1768264499.5410256
[2026-01-12 23:05:45] 2026-01-13 04:05:09,833 | INFO     | mean y: 2629504.2205128204
[2026-01-12 23:05:45] 2026-01-13 04:05:09,833 | INFO     | intersect: -2520993942.5530086
[2026-01-12 23:05:45] 2026-01-13 04:05:09,833 | INFO     | chi2: 0.00693164125302486
[2026-01-12 23:05:45] 2026-01-13 04:05:09,834 | INFO     | current memory leak: 1.43 B/s (using 390 data points, chi2=0.01)
[2026-01-12 23:05:45] 2026-01-13 04:05:09,835 | INFO     | could have reported an average CPU frequency of 3207 MHz (18 samples)
[2026-01-12 23:05:45] 2026-01-13 04:05:09,835 | INFO     | ..............................
[2026-01-12 23:05:45] 2026-01-13 04:05:09,835 | INFO     | . Timing measurements:
[2026-01-12 23:05:45] 2026-01-13 04:05:09,835 | INFO     | . get job = 0 s
[2026-01-12 23:05:45] 2026-01-13 04:05:09,835 | INFO     | . initial setup = 3 s
[2026-01-12 23:05:45] 2026-01-13 04:05:09,835 | INFO     | . payload setup = 27 s
[2026-01-12 23:05:45] 2026-01-13 04:05:09,836 | INFO     | . stage-in = 0 s
[2026-01-12 23:05:45] 2026-01-13 04:05:09,836 | INFO     | . payload execution = 25693 s
[2026-01-12 23:05:45] 2026-01-13 04:05:09,836 | INFO     | . stage-out = 3 s
[2026-01-12 23:05:45] 2026-01-13 04:05:09,836 | INFO     | . log creation = 0 s
[2026-01-12 23:05:45] 2026-01-13 04:05:09,836 | INFO     | ..............................
[2026-01-12 23:05:45] 2026-01-13 04:05:09,847 | INFO     | sufficient remaining disk space (123511767040 B)
[2026-01-12 23:05:45] 2026-01-13 04:05:09,866 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-12 23:05:45] 2026-01-13 04:05:09,877 | INFO     | size of work directory /tmp/boinchome/slots/5/PanDA_Pilot-6967681832: 4354272 B (within 4404019200 B limit)
[2026-01-12 23:05:45] 2026-01-13 04:05:09,877 | INFO     | pfn file=/tmp/boinchome/slots/5/PanDA_Pilot-6967681832/HITS.48188598._000008.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-12 23:05:45] 2026-01-13 04:05:09,877 | INFO     | total size of present files: 0 B (workdir size: 4354272 B)
[2026-01-12 23:05:45] 2026-01-13 04:05:09,877 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/5/PanDA_Pilot-6967681832/HITS.48188598._000008.pool.root.1 since it does not exist
[2026-01-12 23:05:45] 2026-01-13 04:05:09,955 | INFO     | 
[2026-01-12 23:05:45] 2026-01-13 04:05:09,955 | INFO     | job summary report
[2026-01-12 23:05:45] 2026-01-13 04:05:09,959 | INFO     | --------------------------------------------------
[2026-01-12 23:05:45] 2026-01-13 04:05:09,959 | INFO     | PanDA job id: 6967681832
[2026-01-12 23:05:45] 2026-01-13 04:05:09,959 | INFO     | task id: 48188598
[2026-01-12 23:05:45] 2026-01-13 04:05:09,959 | INFO     | errors: (none)
[2026-01-12 23:05:45] 2026-01-13 04:05:09,959 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 23:05:45] 2026-01-13 04:05:09,959 | INFO     | pilot state: finished 
[2026-01-12 23:05:45] 2026-01-13 04:05:09,959 | INFO     | transexitcode: 0
[2026-01-12 23:05:45] 2026-01-13 04:05:09,959 | INFO     | exeerrorcode: 0
[2026-01-12 23:05:45] 2026-01-13 04:05:09,959 | INFO     | exeerrordiag: 
[2026-01-12 23:05:45] 2026-01-13 04:05:09,959 | INFO     | exitcode: 0
[2026-01-12 23:05:45] 2026-01-13 04:05:09,959 | INFO     | exitmsg: OK
[2026-01-12 23:05:45] 2026-01-13 04:05:09,959 | INFO     | cpuconsumptiontime: 49135 s
[2026-01-12 23:05:45] 2026-01-13 04:05:09,960 | INFO     | nevents: 400
[2026-01-12 23:05:45] 2026-01-13 04:05:09,960 | INFO     | neventsw: 0
[2026-01-12 23:05:45] 2026-01-13 04:05:09,960 | INFO     | pid: 702943
[2026-01-12 23:05:45] 2026-01-13 04:05:09,960 | INFO     | pgrp: 702943
[2026-01-12 23:05:45] 2026-01-13 04:05:09,960 | INFO     | corecount: 8
[2026-01-12 23:05:45] 2026-01-13 04:05:09,960 | INFO     | event service: False
[2026-01-12 23:05:45] 2026-01-13 04:05:09,960 | INFO     | sizes: {0: 2283946, 1: 2284145, 12: 2284145, 21: 2284435, 23: 2284463, 25726: 2320678, 25730: 2329676, 25731: 2329732, 25743: 2329954}
[2026-01-12 23:05:45] 2026-01-13 04:05:09,960 | INFO     | --------------------------------------------------
[2026-01-12 23:05:45] 2026-01-13 04:05:09,960 | INFO     | 
[2026-01-12 23:05:45] 2026-01-13 04:05:09,960 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-12 23:05:45] 2026-01-13 04:05:10,046 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 23:05:45] 2026-01-13 04:05:10,050 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 23:05:45] 2026-01-13 04:05:10,050 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 23:05:45] 2026-01-13 04:05:10,050 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 23:05:45] 2026-01-13 04:05:10,050 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 23:05:45] 2026-01-13 04:05:10,050 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 23:05:45] 2026-01-13 04:05:10,050 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 23:05:45] 2026-01-13 04:05:10,050 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 23:05:45] 2026-01-13 04:05:10,050 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 23:05:45] 2026-01-13 04:05:10,050 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 23:05:45] 2026-01-13 04:05:10,050 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 23:05:45] 2026-01-13 04:05:10,051 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 23:05:45] 2026-01-13 04:05:10,051 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 23:05:45] 2026-01-13 04:05:10,051 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 23:05:45] 2026-01-13 04:05:10,051 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 23:05:45] 2026-01-13 04:05:10,051 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 23:05:45] 2026-01-13 04:05:10,051 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 23:05:45] 2026-01-13 04:05:10,051 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 23:05:45] 2026-01-13 04:05:10,051 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 23:05:45] 2026-01-13 04:05:10,051 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 23:05:45] 2026-01-13 04:05:10,051 | INFO     | job 6967681832 has completed (purged errors)
[2026-01-12 23:05:45] 2026-01-13 04:05:10,051 | INFO     | overall cleanup function is called
[2026-01-12 23:05:45] 2026-01-13 04:05:10,460 | INFO     | number of running child processes to parent process 702943: 1
[2026-01-12 23:05:45] 2026-01-13 04:05:10,460 | INFO     | maximum number of monitored processes: 6
[2026-01-12 23:05:45] 2026-01-13 04:05:10,460 | INFO     | aborting job monitoring since job object (job id=6967681832) has expired
[2026-01-12 23:05:45] 2026-01-13 04:05:11,067 | INFO     | --- collectZombieJob: --- 10, [702943]
[2026-01-12 23:05:45] 2026-01-13 04:05:11,067 | INFO     | zombie collector waiting for pid 702943
[2026-01-12 23:05:45] 2026-01-13 04:05:11,067 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 23:05:45] 2026-01-13 04:05:11,067 | INFO     | collected zombie processes
[2026-01-12 23:05:45] 2026-01-13 04:05:11,067 | INFO     | will attempt to kill all subprocesses of pid=702943
[2026-01-12 23:05:45] 2026-01-13 04:05:12,539 | INFO     | process IDs to be killed: [702943] (in reverse order)
[2026-01-12 23:05:45] 2026-01-13 04:05:12,708 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 23:05:45] 2026-01-13 04:05:12,708 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 23:05:45] 2026-01-13 04:05:12,763 | INFO     | did not find any defunct processes belonging to 702943
[2026-01-12 23:05:45] 2026-01-13 04:05:12,838 | INFO     | did not find any defunct processes belonging to 702943
[2026-01-12 23:05:45] 2026-01-13 04:05:12,848 | INFO     | ready for new job
[2026-01-12 23:05:45] 2026-01-13 04:05:12,848 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 23:05:45] 2026-01-13 04:05:12,851 | INFO     | ***************************************
[2026-01-12 23:05:45] 2026-01-13 04:05:12,851 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 23:05:45] 2026-01-13 04:05:12,851 | INFO     | ***************************************
[2026-01-12 23:05:45] 2026-01-13 04:05:12,851 | INFO     | 
[2026-01-12 23:05:45] 2026-01-13 04:05:12,875 | INFO     | architecture information:
[2026-01-12 23:05:45] 2026-01-13 04:05:12,876 | INFO     | executing command: cat /etc/os-release
[2026-01-12 23:05:45] 2026-01-13 04:05:13,004 | INFO     | cat /etc/os-release:
[2026-01-12 23:05:45] NAME="CentOS Linux"
[2026-01-12 23:05:45] VERSION="7 (Core)"
[2026-01-12 23:05:45] ID="centos"
[2026-01-12 23:05:45] ID_LIKE="rhel fedora"
[2026-01-12 23:05:45] VERSION_ID="7"
[2026-01-12 23:05:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 23:05:45] ANSI_COLOR="0;31"
[2026-01-12 23:05:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 23:05:45] HOME_URL="https://www.centos.org/"
[2026-01-12 23:05:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 23:05:45] 
[2026-01-12 23:05:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 23:05:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 23:05:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 23:05:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 23:05:45] 
[2026-01-12 23:05:45] 2026-01-13 04:05:13,004 | INFO     | ***************************************
[2026-01-12 23:05:45] 2026-01-13 04:05:13,524 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-12 23:05:45] 2026-01-13 04:05:13,545 | INFO     | sufficient remaining disk space (123519107072 B)
[2026-01-12 23:05:45] 2026-01-13 04:05:13,545 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 23:05:45] 2026-01-13 04:05:13,546 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 23:05:45] 2026-01-13 04:05:13,546 | INFO     | update_server=False
[2026-01-12 23:05:45] 2026-01-13 04:05:13,546 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 23:05:45] 2026-01-13 04:05:13,546 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 23:05:45] 2026-01-13 04:05:13,551 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 23:05:45] 2026-01-13 04:05:13,705 | INFO     | all job control threads have been joined
[2026-01-12 23:05:45] 2026-01-13 04:05:13,973 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 23:05:45] 2026-01-13 04:05:13,973 | INFO     | aborting loop
[2026-01-12 23:05:45] 2026-01-13 04:05:13,982 | INFO     | [monitor] cgroup control has ended
[2026-01-12 23:05:45] 2026-01-13 04:05:14,108 | INFO     | all data control threads have been joined
[2026-01-12 23:05:45] 2026-01-13 04:05:14,259 | INFO     | all payload control threads have been joined
[2026-01-12 23:05:45] 2026-01-13 04:05:14,563 | INFO     | [job] retrieve thread has finished
[2026-01-12 23:05:45] 2026-01-13 04:05:14,711 | INFO     | [job] control thread has finished
[2026-01-12 23:05:45] 2026-01-13 04:05:14,780 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 23:05:45] 2026-01-13 04:05:14,790 | INFO     | [payload] failed_post thread has finished
[2026-01-12 23:05:45] 2026-01-13 04:05:14,905 | INFO     | [data] copytool_in thread has finished
[2026-01-12 23:05:45] 2026-01-13 04:05:14,912 | INFO     | [job] validate thread has finished
[2026-01-12 23:05:45] 2026-01-13 04:05:14,915 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 23:05:45] 2026-01-13 04:05:14,938 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 23:05:45] 2026-01-13 04:05:14,984 | INFO     | [job] job monitor thread has finished
[2026-01-12 23:05:45] 2026-01-13 04:05:14,985 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 23:05:45] 2026-01-13 04:05:15,114 | INFO     | [data] control thread has finished
[2026-01-12 23:05:45] 2026-01-13 04:05:15,159 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 23:05:45] 2026-01-13 04:05:15,265 | INFO     | [payload] control thread has finished
[2026-01-12 23:05:45] 2026-01-13 04:05:15,372 | INFO     | [payload] validate_post thread has finished
[2026-01-12 23:05:45] 2026-01-13 04:05:15,558 | INFO     | [data] copytool_out thread has finished
[2026-01-12 23:05:45] 2026-01-13 04:05:16,003 | INFO     | [job] queue monitor thread has finished
[2026-01-12 23:05:45] 2026-01-13 04:05:17,556 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 23:05:45] 2026-01-13 04:05:19,004 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140472192206656)>', '<ExcThread(monitor, started 140471368136448)>']
[2026-01-12 23:05:45] 2026-01-13 04:05:24,030 | INFO     | all workflow threads have been joined
[2026-01-12 23:05:45] 2026-01-13 04:05:24,030 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 23:05:45] 2026-01-13 04:05:24,030 | INFO     | traces error code: 0
[2026-01-12 23:05:45] 2026-01-13 04:05:24,031 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 23:05:45] 2026-01-13 04:05:45,009 | INFO     | PID=686899 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-12 23:05:45] 2026-01-13 04:05:45,010 | INFO     | .. there are 37 such processes running
[2026-01-12 23:05:45] 2026-01-13 04:05:45,011 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 23:05:45] 2026-01-13 04:05:45,011 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 23:05:45] 2026-01-13 04:05:45,011 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 23:05:45] 2026-01-13 04:05:45,011 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 23:05:45] 2026-01-13 04:05:45,011 | INFO     | [monitor] control thread has ended
[2026-01-12 23:05:45] 2026-01-13 04:05:45,135 [wrapper] ==== pilot stdout END ====
[2026-01-12 23:05:45] 2026-01-13 04:05:45,137 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 23:05:45] 2026-01-13 04:05:45,139 [wrapper] pilotpid: 686899
[2026-01-12 23:05:45] 2026-01-13 04:05:45,141 [wrapper] Pilot exit status: 0
[2026-01-12 23:05:45] 2026-01-13 04:05:45,154 [wrapper] pandaids: 6967681832
[2026-01-12 23:05:45] 2026-01-13 04:05:45,260 [wrapper] cleanup supervisor_pilot 2690265 686900
[2026-01-12 23:05:45] 2026-01-13 04:05:45,278 [wrapper] Test setup, not cleaning
[2026-01-12 23:05:45] 2026-01-13 04:05:45,281 [wrapper] apfmon messages muted
[2026-01-12 23:05:45] 2026-01-13 04:05:45,283 [wrapper] ==== wrapper stdout END ====
[2026-01-12 23:05:45] 2026-01-13 04:05:45,287 [wrapper] ==== wrapper stderr END ====
[2026-01-12 23:05:45]  *** Error codes and diagnostics ***
[2026-01-12 23:05:45]     "exeErrorCode": 0,
[2026-01-12 23:05:45]     "exeErrorDiag": "",
[2026-01-12 23:05:45]     "pilotErrorCode": 0,
[2026-01-12 23:05:45]     "pilotErrorDiag": "",
[2026-01-12 23:05:45]  *** Listing of results directory ***
[2026-01-12 23:05:45] total 637280
[2026-01-12 23:05:45] -rw-r--r--. 1 boincer umatlas    579449 Jan 12 15:16 pilot3.tar.gz
[2026-01-12 23:05:45] -rwx------. 1 boincer umatlas     36322 Jan 12 15:41 runpilot2-wrapper.sh
[2026-01-12 23:05:45] -rw-r--r--. 1 boincer umatlas      5112 Jan 12 15:41 queuedata.json
[2026-01-12 23:05:45] -rw-r--r--. 1 boincer umatlas       100 Jan 12 15:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 23:05:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 12 15:54 run_atlas
[2026-01-12 23:05:45] -rw-r--r--. 1 boincer umatlas       105 Jan 12 15:54 job.xml
[2026-01-12 23:05:45] -rw-r--r--. 2 boincer umatlas 349143069 Jan 12 15:54 EVNT.48188594._000001.pool.root.1
[2026-01-12 23:05:45] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 15:54 start_atlas.sh
[2026-01-12 23:05:45] drwxrwx--x. 2 boincer umatlas      4096 Jan 12 15:54 shared
[2026-01-12 23:05:45] -rw-r--r--. 2 boincer umatlas    592396 Jan 12 15:54 input.tar.gz
[2026-01-12 23:05:45] -rw-r--r--. 1 boincer umatlas         0 Jan 12 15:54 boinc_lockfile
[2026-01-12 23:05:45] -rw-r--r--. 1 boincer umatlas      2626 Jan 12 15:54 pandaJob.out
[2026-01-12 23:05:45] -rw-------. 1 boincer umatlas        57 Jan 12 15:54 setup.sh.local
[2026-01-12 23:05:45] -rw-------. 1 boincer umatlas    988547 Jan 12 15:55 agis_schedconf.cvmfs.json
[2026-01-12 23:05:45] drwx------. 5 boincer umatlas      4096 Jan 12 15:55 pilot3
[2026-01-12 23:05:45] -rw-------. 1 boincer umatlas 291836673 Jan 12 23:02 HITS.48188598._000008.pool.root.1
[2026-01-12 23:05:45] -rw-r--r--. 1 boincer umatlas       531 Jan 12 23:02 boinc_task_state.xml
[2026-01-12 23:05:45] -rw-------. 1 boincer umatlas      1045 Jan 12 23:04 memory_monitor_summary.json
[2026-01-12 23:05:45] -rw-r--r--. 1 boincer umatlas      6947 Jan 12 23:04 init_data.xml
[2026-01-12 23:05:45] -rw-------. 1 boincer umatlas   1516240 Jan 12 23:04 agis_ddmendpoints.agis.ALL.json
[2026-01-12 23:05:45] -rw-------. 1 boincer umatlas    700360 Jan 12 23:04 log.48188598._000008.job.log.tgz.1
[2026-01-12 23:05:45] -rw-------. 1 boincer umatlas      7781 Jan 12 23:05 heartbeat.json
[2026-01-12 23:05:45] -rw-r--r--. 1 boincer umatlas      8192 Jan 12 23:05 boinc_mmap_file
[2026-01-12 23:05:45] -rw-r--r--. 1 boincer umatlas        28 Jan 12 23:05 wrapper_checkpoint.txt
[2026-01-12 23:05:45] -rw-------. 1 boincer umatlas        95 Jan 12 23:05 pilot_heartbeat.json
[2026-01-12 23:05:45] -rw-------. 1 boincer umatlas       822 Jan 12 23:05 pilotlog.txt
[2026-01-12 23:05:45] -rw-------. 1 boincer umatlas   3139068 Jan 12 23:05 log.48188598._000008.job.log.1
[2026-01-12 23:05:45] -rw-------. 1 boincer umatlas       357 Jan 12 23:05 output.list
[2026-01-12 23:05:45] -rw-r--r--. 1 boincer umatlas       620 Jan 12 23:05 runtime_log
[2026-01-12 23:05:45] -rw-------. 1 boincer umatlas   3860480 Jan 12 23:05 result.tar.gz
[2026-01-12 23:05:45] -rw-------. 1 boincer umatlas       660 Jan 12 23:05 WjYLDm0tdz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRnnKDmJ9SaGm.diag
[2026-01-12 23:05:45] -rw-r--r--. 1 boincer umatlas      9338 Jan 12 23:05 runtime_log.err
[2026-01-12 23:05:45] -rw-r--r--. 1 boincer umatlas     21465 Jan 12 23:05 stderr.txt
[2026-01-12 23:05:45] HITS file was successfully produced:
[2026-01-12 23:05:45] -rw-------. 1 boincer umatlas 291836673 Jan 12 23:02 shared/HITS.pool.root.1
[2026-01-12 23:05:45]  *** Contents of shared directory: ***
[2026-01-12 23:05:45] total 630336
[2026-01-12 23:05:45] -rw-r--r--. 2 boincer umatlas 349143069 Jan 12 15:54 ATLAS.root_0
[2026-01-12 23:05:45] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 15:54 start_atlas.sh
[2026-01-12 23:05:45] -rw-r--r--. 2 boincer umatlas    592396 Jan 12 15:54 input.tar.gz
[2026-01-12 23:05:45] -rw-------. 1 boincer umatlas 291836673 Jan 12 23:02 HITS.pool.root.1
[2026-01-12 23:05:45] -rw-------. 1 boincer umatlas   3860480 Jan 12 23:05 result.tar.gz
23:05:47 (682272): run_atlas exited; CPU time 50242.491811
23:05:47 (682272): called boinc_finish(0)

</stderr_txt>
]]>

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