Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:45 (3786536): wrapper (7.7.26015): starting
00:00:45 (3786536): wrapper: running run_atlas (--nthreads 8)
[2026-01-13 00:00:45] Arguments: --nthreads 8
[2026-01-13 00:00:45] Threads: 8
[2026-01-13 00:00:45] Checking for CVMFS
[2026-01-13 00:00:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 00:00:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 00:00:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 00:00:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 00:00:47] 2.13.3.0 7410 98677 611656 155077 0 120 23067759 25181185 20402 16776704 0 525039896 99.588 538517135 28347 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-13 00:00:47] CVMFS is ok
[2026-01-13 00:00:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 00:00:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 00:00:48] Further information can be found at the LHC@home message board.
[2026-01-13 00:00:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 00:00:48] Checking for apptainer binary...
[2026-01-13 00:00:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 00:00:48] Running /usr/bin/apptainer --version
[2026-01-13 00:00:48] apptainer version 1.4.5-2.el9
[2026-01-13 00:00:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 00:00:49] c-16-37.aglt2.org
[2026-01-13 00:00:49] apptainer works
[2026-01-13 00:00:49] Set ATHENA_PROC_NUMBER=8
[2026-01-13 00:00:49] Set ATHENA_CORE_NUMBER=8
[2026-01-13 00:00:50] Starting ATLAS job with PandaID=6967682040
[2026-01-13 00:00:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 14:20:40]  *** The last 200 lines of the pilot log: ***
[2026-01-13 14:20:40] 2026-01-13 19:19:42,994 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 14:20:40] 2026-01-13 19:19:43,404 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 14:20:40] 2026-01-13 19:19:43,415 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2799.8314375000004
[2026-01-13 14:20:40] 2026-01-13 19:19:43,424 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6967682040/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 14:20:40] 2026-01-13 19:19:43,425 | INFO     | extracted standard info from prmon json
[2026-01-13 14:20:40] 2026-01-13 19:19:43,425 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 14:20:40] 2026-01-13 19:19:43,425 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 14:20:40] 2026-01-13 19:19:43,426 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 14:20:40] 2026-01-13 19:19:43,426 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 14:20:40] 2026-01-13 19:19:43,441 | INFO     | fitting pss+swap vs Time
[2026-01-13 14:20:40] 2026-01-13 19:19:43,442 | INFO     | sum of square deviations: 183126147644.31998
[2026-01-13 14:20:40] 2026-01-13 19:19:43,461 | INFO     | sum of deviations: 602556855914.6222
[2026-01-13 14:20:40] 2026-01-13 19:19:43,462 | INFO     | mean x: 1768306379.419547
[2026-01-13 14:20:40] 2026-01-13 19:19:43,462 | INFO     | mean y: 2595117.7425506557
[2026-01-13 14:20:40] 2026-01-13 19:19:43,462 | INFO     | intersect: -5815826478.425723
[2026-01-13 14:20:40] 2026-01-13 19:19:43,463 | INFO     | chi2: 6.723944429417429
[2026-01-13 14:20:40] 2026-01-13 19:19:43,464 | INFO     | sum of square deviations: 179871873121.68332
[2026-01-13 14:20:40] 2026-01-13 19:19:43,482 | INFO     | sum of deviations: 709016768101.8771
[2026-01-13 14:20:40] 2026-01-13 19:19:43,482 | INFO     | mean x: 1768306226.9280577
[2026-01-13 14:20:40] 2026-01-13 19:19:43,482 | INFO     | mean y: 2600087.547961631
[2026-01-13 14:20:40] 2026-01-13 19:19:43,483 | INFO     | intersect: -6967687952.8884
[2026-01-13 14:20:40] 2026-01-13 19:19:43,484 | INFO     | chi2: 5.358736971311455
[2026-01-13 14:20:40] 2026-01-13 19:19:43,484 | INFO     | current chi2=5.358736971311455 (change=20.30366955641627 %)
[2026-01-13 14:20:40] 2026-01-13 19:19:43,484 | INFO     | right removable region: 833
[2026-01-13 14:20:40] 2026-01-13 19:19:43,485 | INFO     | sum of square deviations: 179871248607.39093
[2026-01-13 14:20:40] 2026-01-13 19:19:43,506 | INFO     | sum of deviations: 333741481716.96606
[2026-01-13 14:20:40] 2026-01-13 19:19:43,507 | INFO     | mean x: 1768306531.9256594
[2026-01-13 14:20:40] 2026-01-13 19:19:43,507 | INFO     | mean y: 2607706.01558753
[2026-01-13 14:20:40] 2026-01-13 19:19:43,507 | INFO     | intersect: -3278390489.437032
[2026-01-13 14:20:40] 2026-01-13 19:19:43,508 | INFO     | chi2: 3.2899704991995637
[2026-01-13 14:20:40] 2026-01-13 19:19:43,508 | INFO     | current chi2=3.2899704991995637 (change=51.070825558791675 %)
[2026-01-13 14:20:40] 2026-01-13 19:19:43,509 | INFO     | sum of square deviations: 176655191993.26147
[2026-01-13 14:20:40] 2026-01-13 19:19:43,530 | INFO     | sum of deviations: 187221371149.94086
[2026-01-13 14:20:40] 2026-01-13 19:19:43,530 | INFO     | mean x: 1768306684.4306393
[2026-01-13 14:20:40] 2026-01-13 19:19:43,530 | INFO     | mean y: 2614648.451145959
[2026-01-13 14:20:40] 2026-01-13 19:19:43,531 | INFO     | intersect: -1871458784.303316
[2026-01-13 14:20:40] 2026-01-13 19:19:43,532 | INFO     | chi2: 2.2771254777127363
[2026-01-13 14:20:40] 2026-01-13 19:19:43,532 | INFO     | current chi2=2.2771254777127363 (change=30.78583901385281 %)
[2026-01-13 14:20:40] 2026-01-13 19:19:43,533 | INFO     | sum of square deviations: 173477694485.59116
[2026-01-13 14:20:40] 2026-01-13 19:19:43,664 | INFO     | sum of deviations: 84289347440.92377
[2026-01-13 14:20:40] 2026-01-13 19:19:43,664 | INFO     | mean x: 1768306836.9356797
[2026-01-13 14:20:40] 2026-01-13 19:19:43,664 | INFO     | mean y: 2619591.074029126
[2026-01-13 14:20:40] 2026-01-13 19:19:43,665 | INFO     | intersect: -856565388.3125415
[2026-01-13 14:20:40] 2026-01-13 19:19:43,666 | INFO     | chi2: 1.7831799844381742
[2026-01-13 14:20:40] 2026-01-13 19:19:43,666 | INFO     | current chi2=1.7831799844381742 (change=21.69162385248558 %)
[2026-01-13 14:20:40] 2026-01-13 19:19:43,666 | INFO     | left removable region: 30
[2026-01-13 14:20:40] 2026-01-13 19:19:43,667 | INFO     | sum of square deviations: 160548750499.51453
[2026-01-13 14:20:40] 2026-01-13 19:19:43,734 | INFO     | time since job start (51412s) is within the limit (349056.0s)
[2026-01-13 14:20:40] 2026-01-13 19:19:43,839 | INFO     | sum of deviations: 97423462771.53682
[2026-01-13 14:20:40] 2026-01-13 19:19:43,839 | INFO     | mean x: 1768307111.460772
[2026-01-13 14:20:40] 2026-01-13 19:19:43,839 | INFO     | mean y: 2629408.7471980075
[2026-01-13 14:20:40] 2026-01-13 19:19:43,839 | INFO     | intersect: -1070406672.2316027
[2026-01-13 14:20:40] 2026-01-13 19:19:43,840 | INFO     | chi2: 0.067564911741953
[2026-01-13 14:20:40] 2026-01-13 19:19:43,848 | INFO     | current memory leak: 0.61 B/s (using 803 data points, chi2=0.07)
[2026-01-13 14:20:40] 2026-01-13 19:19:43,849 | INFO     | could have reported an average CPU frequency of 2744 MHz (31 samples)
[2026-01-13 14:20:40] 2026-01-13 19:19:43,849 | INFO     | ..............................
[2026-01-13 14:20:40] 2026-01-13 19:19:43,849 | INFO     | . Timing measurements:
[2026-01-13 14:20:40] 2026-01-13 19:19:43,849 | INFO     | . get job = 0 s
[2026-01-13 14:20:40] 2026-01-13 19:19:43,849 | INFO     | . initial setup = 7 s
[2026-01-13 14:20:40] 2026-01-13 19:19:43,850 | INFO     | . payload setup = 76 s
[2026-01-13 14:20:40] 2026-01-13 19:19:43,850 | INFO     | . stage-in = 1 s
[2026-01-13 14:20:40] 2026-01-13 19:19:43,850 | INFO     | . payload execution = 51195 s
[2026-01-13 14:20:40] 2026-01-13 19:19:43,850 | INFO     | . stage-out = 3 s
[2026-01-13 14:20:40] 2026-01-13 19:19:43,850 | INFO     | . log creation = 0 s
[2026-01-13 14:20:40] 2026-01-13 19:19:43,850 | INFO     | ..............................
[2026-01-13 14:20:40] 2026-01-13 19:19:44,050 | INFO     | 
[2026-01-13 14:20:40] 2026-01-13 19:19:44,050 | INFO     | job summary report
[2026-01-13 14:20:40] 2026-01-13 19:19:44,050 | INFO     | --------------------------------------------------
[2026-01-13 14:20:40] 2026-01-13 19:19:44,050 | INFO     | PanDA job id: 6967682040
[2026-01-13 14:20:40] 2026-01-13 19:19:44,050 | INFO     | task id: 48188598
[2026-01-13 14:20:40] 2026-01-13 19:19:44,050 | INFO     | errors: (none)
[2026-01-13 14:20:40] 2026-01-13 19:19:44,050 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 14:20:40] 2026-01-13 19:19:44,050 | INFO     | pilot state: finished 
[2026-01-13 14:20:40] 2026-01-13 19:19:44,051 | INFO     | transexitcode: 0
[2026-01-13 14:20:40] 2026-01-13 19:19:44,051 | INFO     | exeerrorcode: 0
[2026-01-13 14:20:40] 2026-01-13 19:19:44,051 | INFO     | exeerrordiag: 
[2026-01-13 14:20:40] 2026-01-13 19:19:44,051 | INFO     | exitcode: 0
[2026-01-13 14:20:40] 2026-01-13 19:19:44,051 | INFO     | exitmsg: OK
[2026-01-13 14:20:40] 2026-01-13 19:19:44,051 | INFO     | cpuconsumptiontime: 77537 s
[2026-01-13 14:20:40] 2026-01-13 19:19:44,051 | INFO     | nevents: 400
[2026-01-13 14:20:40] 2026-01-13 19:19:44,051 | INFO     | neventsw: 0
[2026-01-13 14:20:40] 2026-01-13 19:19:44,051 | INFO     | pid: 3804151
[2026-01-13 14:20:40] 2026-01-13 19:19:44,052 | INFO     | pgrp: 3804151
[2026-01-13 14:20:40] 2026-01-13 19:19:44,052 | INFO     | corecount: 8
[2026-01-13 14:20:40] 2026-01-13 19:19:44,052 | INFO     | event service: False
[2026-01-13 14:20:40] 2026-01-13 19:19:44,052 | INFO     | sizes: {0: 2283298, 1: 2283899, 2: 2283983, 4: 2284039, 5: 2284210, 6: 2284266, 7: 2284422, 19: 2284450, 30: 2284478, 41: 2284506, 53: 2284534, 58: 2285104, 65: 22
[2026-01-13 14:20:40] 2026-01-13 19:19:44,052 | INFO     | --------------------------------------------------
[2026-01-13 14:20:40] 2026-01-13 19:19:44,052 | INFO     | 
[2026-01-13 14:20:40] 2026-01-13 19:19:44,052 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-13 14:20:40] 2026-01-13 19:19:44,374 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 14:20:40] 2026-01-13 19:19:44,375 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 14:20:40] 2026-01-13 19:19:44,375 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 14:20:40] 2026-01-13 19:19:44,375 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 14:20:40] 2026-01-13 19:19:44,375 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 14:20:40] 2026-01-13 19:19:44,375 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 14:20:40] 2026-01-13 19:19:44,375 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 14:20:40] 2026-01-13 19:19:44,375 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 14:20:40] 2026-01-13 19:19:44,375 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 14:20:40] 2026-01-13 19:19:44,376 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 14:20:40] 2026-01-13 19:19:44,376 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 14:20:40] 2026-01-13 19:19:44,376 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 14:20:40] 2026-01-13 19:19:44,376 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 14:20:40] 2026-01-13 19:19:44,376 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 14:20:40] 2026-01-13 19:19:44,376 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 14:20:40] 2026-01-13 19:19:44,376 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 14:20:40] 2026-01-13 19:19:44,376 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 14:20:40] 2026-01-13 19:19:44,377 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 14:20:40] 2026-01-13 19:19:44,377 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 14:20:40] 2026-01-13 19:19:44,377 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 14:20:40] 2026-01-13 19:19:44,377 | INFO     | job 6967682040 has completed (purged errors)
[2026-01-13 14:20:40] 2026-01-13 19:19:44,377 | INFO     | overall cleanup function is called
[2026-01-13 14:20:40] 2026-01-13 19:19:45,440 | INFO     | --- collectZombieJob: --- 10, [3804151]
[2026-01-13 14:20:40] 2026-01-13 19:19:45,441 | INFO     | zombie collector waiting for pid 3804151
[2026-01-13 14:20:40] 2026-01-13 19:19:45,441 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 14:20:40] 2026-01-13 19:19:45,441 | INFO     | collected zombie processes
[2026-01-13 14:20:40] 2026-01-13 19:19:45,441 | INFO     | will attempt to kill all subprocesses of pid=3804151
[2026-01-13 14:20:40] 2026-01-13 19:19:46,010 | INFO     | process IDs to be killed: [3804151] (in reverse order)
[2026-01-13 14:20:40] 2026-01-13 19:19:46,162 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 14:20:40] 2026-01-13 19:19:46,162 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 14:20:40] 2026-01-13 19:19:46,291 | INFO     | did not find any defunct processes belonging to 3804151
[2026-01-13 14:20:40] 2026-01-13 19:19:46,339 | INFO     | did not find any defunct processes belonging to 3804151
[2026-01-13 14:20:40] 2026-01-13 19:19:46,339 | INFO     | ready for new job
[2026-01-13 14:20:40] 2026-01-13 19:19:46,340 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 14:20:40] 2026-01-13 19:19:46,343 | INFO     | ***************************************
[2026-01-13 14:20:40] 2026-01-13 19:19:46,343 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 14:20:40] 2026-01-13 19:19:46,343 | INFO     | ***************************************
[2026-01-13 14:20:40] 2026-01-13 19:19:46,344 | INFO     | 
[2026-01-13 14:20:40] 2026-01-13 19:19:46,346 | INFO     | architecture information:
[2026-01-13 14:20:40] 2026-01-13 19:19:46,347 | INFO     | executing command: cat /etc/os-release
[2026-01-13 14:20:40] 2026-01-13 19:19:46,363 | INFO     | cat /etc/os-release:
[2026-01-13 14:20:40] NAME="CentOS Linux"
[2026-01-13 14:20:40] VERSION="7 (Core)"
[2026-01-13 14:20:40] ID="centos"
[2026-01-13 14:20:40] ID_LIKE="rhel fedora"
[2026-01-13 14:20:40] VERSION_ID="7"
[2026-01-13 14:20:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 14:20:40] ANSI_COLOR="0;31"
[2026-01-13 14:20:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 14:20:40] HOME_URL="https://www.centos.org/"
[2026-01-13 14:20:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 14:20:40] 
[2026-01-13 14:20:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 14:20:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 14:20:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 14:20:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 14:20:40] 
[2026-01-13 14:20:40] 2026-01-13 19:19:46,363 | INFO     | ***************************************
[2026-01-13 14:20:40] 2026-01-13 19:19:46,867 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-13 14:20:40] 2026-01-13 19:19:46,978 | INFO     | sufficient remaining disk space (61665705984 B)
[2026-01-13 14:20:40] 2026-01-13 19:19:46,978 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 14:20:40] 2026-01-13 19:19:46,979 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 14:20:40] 2026-01-13 19:19:46,979 | INFO     | update_server=False
[2026-01-13 14:20:40] 2026-01-13 19:19:46,979 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 14:20:40] 2026-01-13 19:19:46,983 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 14:20:40] 2026-01-13 19:19:46,983 | INFO     | aborting loop
[2026-01-13 14:20:40] 2026-01-13 19:19:47,245 | INFO     | all data control threads have been joined
[2026-01-13 14:20:40] 2026-01-13 19:19:47,515 | INFO     | all payload control threads have been joined
[2026-01-13 14:20:40] 2026-01-13 19:19:47,633 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 14:20:40] 2026-01-13 19:19:47,730 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 14:20:40] 2026-01-13 19:19:47,985 | INFO     | [job] retrieve thread has finished
[2026-01-13 14:20:40] 2026-01-13 19:19:47,989 | INFO     | [job] job monitor thread has finished
[2026-01-13 14:20:40] 2026-01-13 19:19:48,122 | INFO     | [job] validate thread has finished
[2026-01-13 14:20:40] 2026-01-13 19:19:48,152 | INFO     | [data] copytool_in thread has finished
[2026-01-13 14:20:40] 2026-01-13 19:19:48,254 | INFO     | [data] control thread has finished
[2026-01-13 14:20:40] 2026-01-13 19:19:48,330 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 14:20:40] 2026-01-13 19:19:48,386 | INFO     | [payload] validate_post thread has finished
[2026-01-13 14:20:40] 2026-01-13 19:19:48,388 | INFO     | [payload] failed_post thread has finished
[2026-01-13 14:20:40] 2026-01-13 19:19:48,521 | INFO     | [payload] control thread has finished
[2026-01-13 14:20:40] 2026-01-13 19:19:48,564 | INFO     | all job control threads have been joined
[2026-01-13 14:20:40] 2026-01-13 19:19:48,679 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 14:20:40] 2026-01-13 19:19:49,063 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 14:20:40] 2026-01-13 19:19:49,328 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 14:20:40] 2026-01-13 19:19:49,490 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 14:20:40] 2026-01-13 19:19:49,572 | INFO     | [job] control thread has finished
[2026-01-13 14:20:40] 2026-01-13 19:19:49,645 | INFO     | [data] copytool_out thread has finished
[2026-01-13 14:20:40] 2026-01-13 19:19:50,069 | INFO     | [job] queue monitor thread has finished
[2026-01-13 14:20:40] 2026-01-13 19:19:51,742 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 14:20:40] 2026-01-13 19:20:17,605 | INFO     | PID=3792993 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 14:20:40] 2026-01-13 19:20:17,605 | INFO     | .. there are 43 such processes running
[2026-01-13 14:20:40] 2026-01-13 19:20:17,605 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 14:20:40] 2026-01-13 19:20:17,605 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 14:20:40] 2026-01-13 19:20:17,606 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 14:20:40] 2026-01-13 19:20:34,638 | INFO     | [monitor] cgroup control has ended
[2026-01-13 14:20:40] 2026-01-13 19:20:34,817 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139821980174144)>', '<ExcThread(monitor, started 139820957419264)>']
[2026-01-13 14:20:40] 2026-01-13 19:20:35,719 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 14:20:40] 2026-01-13 19:20:35,720 | INFO     | [monitor] control thread has ended
[2026-01-13 14:20:40] 2026-01-13 19:20:39,842 | INFO     | all workflow threads have been joined
[2026-01-13 14:20:40] 2026-01-13 19:20:39,843 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 14:20:40] 2026-01-13 19:20:39,843 | INFO     | traces error code: 0
[2026-01-13 14:20:40] 2026-01-13 19:20:39,843 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 14:20:40] 2026-01-13 19:20:40,102 [wrapper] ==== pilot stdout END ====
[2026-01-13 14:20:40] 2026-01-13 19:20:40,108 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 14:20:40] 2026-01-13 19:20:40,130 [wrapper] pilotpid: 3792993
[2026-01-13 14:20:40] 2026-01-13 19:20:40,133 [wrapper] Pilot exit status: 0
[2026-01-13 14:20:40] 2026-01-13 19:20:40,158 [wrapper] pandaids: 6967682040
[2026-01-13 14:20:40] 2026-01-13 19:20:40,254 [wrapper] cleanup supervisor_pilot 3939365 3792994
[2026-01-13 14:20:40] 2026-01-13 19:20:40,258 [wrapper] Test setup, not cleaning
[2026-01-13 14:20:40] 2026-01-13 19:20:40,261 [wrapper] apfmon messages muted
[2026-01-13 14:20:40] 2026-01-13 19:20:40,263 [wrapper] ==== wrapper stdout END ====
[2026-01-13 14:20:40] 2026-01-13 19:20:40,266 [wrapper] ==== wrapper stderr END ====
[2026-01-13 14:20:40]  *** Error codes and diagnostics ***
[2026-01-13 14:20:40]     "exeErrorCode": 0,
[2026-01-13 14:20:40]     "exeErrorDiag": "",
[2026-01-13 14:20:40]     "pilotErrorCode": 0,
[2026-01-13 14:20:40]     "pilotErrorDiag": "",
[2026-01-13 14:20:40]  *** Listing of results directory ***
[2026-01-13 14:20:40] total 639680
[2026-01-13 14:20:40] -rw-r--r--. 1 boincer umatlas    579449 Jan 12 15:16 pilot3.tar.gz
[2026-01-13 14:20:40] -rw-r--r--. 1 boincer umatlas      5112 Jan 12 15:38 queuedata.json
[2026-01-13 14:20:40] -rwx------. 1 boincer umatlas     36322 Jan 12 15:38 runpilot2-wrapper.sh
[2026-01-13 14:20:40] -rw-r--r--. 1 boincer umatlas       100 Jan 13 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 14:20:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 13 00:00 run_atlas
[2026-01-13 14:20:40] -rw-r--r--. 1 boincer umatlas       105 Jan 13 00:00 job.xml
[2026-01-13 14:20:40] -rw-r--r--. 2 boincer umatlas 351607203 Jan 13 00:00 EVNT.48188594._000009.pool.root.1
[2026-01-13 14:20:40] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 00:00 start_atlas.sh
[2026-01-13 14:20:40] drwxrwx--x. 2 boincer umatlas      4096 Jan 13 00:00 shared
[2026-01-13 14:20:40] -rw-r--r--. 2 boincer umatlas    592409 Jan 13 00:00 input.tar.gz
[2026-01-13 14:20:40] -rw-r--r--. 1 boincer umatlas         0 Jan 13 00:00 boinc_lockfile
[2026-01-13 14:20:40] -rw-r--r--. 1 boincer umatlas      2630 Jan 13 00:00 pandaJob.out
[2026-01-13 14:20:40] -rw-------. 1 boincer umatlas        57 Jan 13 00:00 setup.sh.local
[2026-01-13 14:20:40] -rw-------. 1 boincer umatlas    987755 Jan 13 00:02 agis_schedconf.cvmfs.json
[2026-01-13 14:20:40] drwx------. 5 boincer umatlas      4096 Jan 13 00:02 pilot3
[2026-01-13 14:20:40] -rw-------. 1 boincer umatlas 287117326 Jan 13 14:17 HITS.48188598._000216.pool.root.1
[2026-01-13 14:20:40] -rw-r--r--. 1 boincer umatlas       532 Jan 13 14:17 boinc_task_state.xml
[2026-01-13 14:20:40] -rw-------. 1 boincer umatlas      1043 Jan 13 14:19 memory_monitor_summary.json
[2026-01-13 14:20:40] -rw-------. 1 boincer umatlas   1516246 Jan 13 14:19 agis_ddmendpoints.agis.ALL.json
[2026-01-13 14:20:40] -rw-------. 1 boincer umatlas    954998 Jan 13 14:19 log.48188598._000216.job.log.tgz.1
[2026-01-13 14:20:40] -rw-------. 1 boincer umatlas        95 Jan 13 14:19 pilot_heartbeat.json
[2026-01-13 14:20:40] -rw-------. 1 boincer umatlas      7827 Jan 13 14:19 heartbeat.json
[2026-01-13 14:20:40] -rw-r--r--. 1 boincer umatlas      6613 Jan 13 14:20 init_data.xml
[2026-01-13 14:20:40] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 14:20 boinc_mmap_file
[2026-01-13 14:20:40] -rw-r--r--. 1 boincer umatlas        28 Jan 13 14:20 wrapper_checkpoint.txt
[2026-01-13 14:20:40] -rw-------. 1 boincer umatlas      4824 Jan 13 14:20 pilotlog.txt
[2026-01-13 14:20:40] -rw-------. 1 boincer umatlas   5246738 Jan 13 14:20 log.48188598._000216.job.log.1
[2026-01-13 14:20:40] -rw-------. 1 boincer umatlas       357 Jan 13 14:20 output.list
[2026-01-13 14:20:40] -rw-r--r--. 1 boincer umatlas       620 Jan 13 14:20 runtime_log
[2026-01-13 14:20:40] -rw-------. 1 boincer umatlas   6225920 Jan 13 14:20 result.tar.gz
[2026-01-13 14:20:40] -rw-r--r--. 1 boincer umatlas      9338 Jan 13 14:20 runtime_log.err
[2026-01-13 14:20:40] -rw-------. 1 boincer umatlas       658 Jan 13 14:20 bNDODm7qdz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5zhKDmbAhlvm.diag
[2026-01-13 14:20:40] -rw-r--r--. 1 boincer umatlas      7966 Jan 13 14:20 stderr.txt
[2026-01-13 14:20:40] HITS file was successfully produced:
[2026-01-13 14:20:40] -rw-------. 1 boincer umatlas 287117326 Jan 13 14:17 shared/HITS.pool.root.1
[2026-01-13 14:20:40]  *** Contents of shared directory: ***
[2026-01-13 14:20:40] total 630440
[2026-01-13 14:20:40] -rw-r--r--. 2 boincer umatlas 351607203 Jan 13 00:00 ATLAS.root_0
[2026-01-13 14:20:40] -rw-r--r--. 2 boincer umatlas     15847 Jan 13 00:00 start_atlas.sh
[2026-01-13 14:20:40] -rw-r--r--. 2 boincer umatlas    592409 Jan 13 00:00 input.tar.gz
[2026-01-13 14:20:40] -rw-------. 1 boincer umatlas 287117326 Jan 13 14:17 HITS.pool.root.1
[2026-01-13 14:20:40] -rw-------. 1 boincer umatlas   6225920 Jan 13 14:20 result.tar.gz
14:20:41 (3786536): run_atlas exited; CPU time 79784.779518
14:20:41 (3786536): called boinc_finish(0)

</stderr_txt>
]]>

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