Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
09:11:28 (441974): wrapper (7.7.26015): starting
09:11:28 (441974): wrapper: running run_atlas (--nthreads 4)
[2026-01-13 09:11:28] Arguments: --nthreads 4
[2026-01-13 09:11:28] Threads: 4
[2026-01-13 09:11:28] Checking for CVMFS
[2026-01-13 09:11:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 09:11:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 09:11:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 09:11:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 09:11:28] 2.13.3.0 3346151 6124 46472 155079 1 57 33129926 33554433 0 130560 0 3021766 99.988 208780 221 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-01-13 09:11:28] CVMFS is ok
[2026-01-13 09:11:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 09:11:28] Checking for apptainer binary...
[2026-01-13 09:11:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 09:11:28] Running /usr/bin/apptainer --version
[2026-01-13 09:11:28] apptainer version 1.4.4
[2026-01-13 09:11:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 09:11:28] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-01-13 09:11:28] apptainer works
[2026-01-13 09:11:28] Set ATHENA_PROC_NUMBER=4
[2026-01-13 09:11:28] Set ATHENA_CORE_NUMBER=4
[2026-01-13 09:11:28] Starting ATLAS job with PandaID=6967163144
[2026-01-13 09:11:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 10:28:47]  *** The last 200 lines of the pilot log: ***
[2026-01-13 10:28:47]  mtime=0
[2026-01-13 10:28:47]  protocol_id=None
[2026-01-13 10:28:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-13 10:28:47]  replicas=None
[2026-01-13 10:28:47]  scope=mc23_13p6TeV
[2026-01-13 10:28:47]  status=None
[2026-01-13 10:28:47]  status_code=0
[2026-01-13 10:28:47]  storage_token=
[2026-01-13 10:28:47]  surl=/home/ek/BOINC/slots/1/PanDA_Pilot-6967163144/log.48188648._000041.job.log.tgz.1
[2026-01-13 10:28:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/f6/log.48188648._000041.job.log.tgz.1
[2026-01-13 10:28:47]  workdir=None
[2026-01-13 10:28:47] ]
[2026-01-13 10:28:47] 2026-01-13 08:27:53,734 | INFO     | transferring file log.48188648._000041.job.log.tgz.1 from /home/ek/BOINC/slots/1/PanDA_Pilot-6967163144/log.48188648._000041.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-01-13 10:28:47] 2026-01-13 08:27:53,734 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/1/PanDA_Pilot-6967163144/log.48188648._000041.job.log.tgz.1 /home/ek/BOINC/slots/1/log.48188648._000041.job
[2026-01-13 10:28:47] 2026-01-13 08:27:53,744 | INFO     | adding to output.list: log.48188648._000041.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/f6/log.48188648._000041.job.log.tg
[2026-01-13 10:28:47] 2026-01-13 08:27:53,745 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-13 10:28:47] 2026-01-13 08:27:53,745 | INFO     | summary of transferred files:
[2026-01-13 10:28:47] 2026-01-13 08:27:53,745 | INFO     |  -- lfn=log.48188648._000041.job.log.tgz.1, status_code=0, status=transferred
[2026-01-13 10:28:47] 2026-01-13 08:27:53,745 | INFO     | stage-out finished correctly
[2026-01-13 10:28:47] 2026-01-13 08:27:55,616 | INFO     | time since job start (4580s) is within the limit (349056.0s)
[2026-01-13 10:28:47] 2026-01-13 08:27:56,321 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-13 10:28:47] 2026-01-13 08:27:56,717 | WARNING  | process 469312 can no longer be monitored (due to stat problems) - aborting
[2026-01-13 10:28:47] 2026-01-13 08:27:56,717 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6967163144/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 10:28:47] 2026-01-13 08:27:56,809 | INFO     | number of running child processes to parent process 469312: 1
[2026-01-13 10:28:47] 2026-01-13 08:27:56,809 | INFO     | maximum number of monitored processes: 6
[2026-01-13 10:28:47] 2026-01-13 08:27:57,622 | INFO     | time since job start (4582s) is within the limit (349056.0s)
[2026-01-13 10:28:47] 2026-01-13 08:27:59,162 | INFO     | job 6967163144 has state=finished
[2026-01-13 10:28:47] 2026-01-13 08:27:59,162 | INFO     | preparing for final server update for job 6967163144 in state='finished'
[2026-01-13 10:28:47] 2026-01-13 08:27:59,163 | INFO     | this job has now completed (state=finished)
[2026-01-13 10:28:47] 2026-01-13 08:27:59,163 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-13 10:28:47] 2026-01-13 08:27:59,163 | INFO     | log transfer has been attempted: DONE
[2026-01-13 10:28:47] 2026-01-13 08:27:59,163 | INFO     | job 6967163144 has finished - writing final server update
[2026-01-13 10:28:47] 2026-01-13 08:27:59,163 | INFO     | total number of processed events: 400 (read)
[2026-01-13 10:28:47] 2026-01-13 08:27:59,163 | INFO     | executing command: lscpu
[2026-01-13 10:28:47] 2026-01-13 08:27:59,177 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 10:28:47] 2026-01-13 08:27:59,312 | INFO     | monitor loop #349: job 0:6967163144 is in state 'finished'
[2026-01-13 10:28:47] 2026-01-13 08:27:59,312 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 10:28:47] 2026-01-13 08:27:59,627 | INFO     | time since job start (4584s) is within the limit (349056.0s)
[2026-01-13 10:28:47] 2026-01-13 08:28:01,279 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 10:28:47] 2026-01-13 08:28:01,282 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 4045.440666666667
[2026-01-13 10:28:47] 2026-01-13 08:28:01,284 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6967163144/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 10:28:47] 2026-01-13 08:28:01,284 | INFO     | extracted standard info from prmon json
[2026-01-13 10:28:47] 2026-01-13 08:28:01,284 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 10:28:47] 2026-01-13 08:28:01,284 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 10:28:47] 2026-01-13 08:28:01,284 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 10:28:47] 2026-01-13 08:28:01,284 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 10:28:47] 2026-01-13 08:28:01,285 | INFO     | fitting pss+swap vs Time
[2026-01-13 10:28:47] 2026-01-13 08:28:01,285 | INFO     | sum of square deviations: 97479037.0
[2026-01-13 10:28:47] 2026-01-13 08:28:01,285 | INFO     | sum of deviations: -12449254052.000002
[2026-01-13 10:28:47] 2026-01-13 08:28:01,285 | INFO     | mean x: 1768290661.5
[2026-01-13 10:28:47] 2026-01-13 08:28:01,285 | INFO     | mean y: 2560409.1470588236
[2026-01-13 10:28:47] 2026-01-13 08:28:01,285 | INFO     | intersect: 225834701967.87665
[2026-01-13 10:28:47] 2026-01-13 08:28:01,285 | INFO     | chi2: 0.12213812349276712
[2026-01-13 10:28:47] 2026-01-13 08:28:01,285 | INFO     | current memory leak: -127.71 B/s (using 68 data points, chi2=0.12)
[2026-01-13 10:28:47] 2026-01-13 08:28:01,285 | INFO     | could have reported an average CPU frequency of 4226 MHz (6 samples)
[2026-01-13 10:28:47] 2026-01-13 08:28:01,285 | INFO     | ..............................
[2026-01-13 10:28:47] 2026-01-13 08:28:01,285 | INFO     | . Timing measurements:
[2026-01-13 10:28:47] 2026-01-13 08:28:01,285 | INFO     | . get job = 0 s
[2026-01-13 10:28:47] 2026-01-13 08:28:01,285 | INFO     | . initial setup = 2 s
[2026-01-13 10:28:47] 2026-01-13 08:28:01,285 | INFO     | . payload setup = 2 s
[2026-01-13 10:28:47] 2026-01-13 08:28:01,285 | INFO     | . stage-in = 0 s
[2026-01-13 10:28:47] 2026-01-13 08:28:01,285 | INFO     | . payload execution = 4559 s
[2026-01-13 10:28:47] 2026-01-13 08:28:01,286 | INFO     | . stage-out = 0 s
[2026-01-13 10:28:47] 2026-01-13 08:28:01,286 | INFO     | . log creation = 0 s
[2026-01-13 10:28:47] 2026-01-13 08:28:01,286 | INFO     | ..............................
[2026-01-13 10:28:47] 2026-01-13 08:28:01,315 | INFO     | 
[2026-01-13 10:28:47] 2026-01-13 08:28:01,315 | INFO     | job summary report
[2026-01-13 10:28:47] 2026-01-13 08:28:01,316 | INFO     | --------------------------------------------------
[2026-01-13 10:28:47] 2026-01-13 08:28:01,316 | INFO     | PanDA job id: 6967163144
[2026-01-13 10:28:47] 2026-01-13 08:28:01,316 | INFO     | task id: 48188648
[2026-01-13 10:28:47] 2026-01-13 08:28:01,316 | INFO     | errors: (none)
[2026-01-13 10:28:47] 2026-01-13 08:28:01,316 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 10:28:47] 2026-01-13 08:28:01,316 | INFO     | pilot state: finished 
[2026-01-13 10:28:47] 2026-01-13 08:28:01,316 | INFO     | transexitcode: 0
[2026-01-13 10:28:47] 2026-01-13 08:28:01,316 | INFO     | exeerrorcode: 0
[2026-01-13 10:28:47] 2026-01-13 08:28:01,316 | INFO     | exeerrordiag: 
[2026-01-13 10:28:47] 2026-01-13 08:28:01,316 | INFO     | exitcode: 0
[2026-01-13 10:28:47] 2026-01-13 08:28:01,316 | INFO     | exitmsg: OK
[2026-01-13 10:28:47] 2026-01-13 08:28:01,316 | INFO     | cpuconsumptiontime: 17539 s
[2026-01-13 10:28:47] 2026-01-13 08:28:01,316 | INFO     | nevents: 400
[2026-01-13 10:28:47] 2026-01-13 08:28:01,316 | INFO     | neventsw: 0
[2026-01-13 10:28:47] 2026-01-13 08:28:01,316 | INFO     | pid: 469312
[2026-01-13 10:28:47] 2026-01-13 08:28:01,316 | INFO     | pgrp: 469312
[2026-01-13 10:28:47] 2026-01-13 08:28:01,316 | INFO     | corecount: 4
[2026-01-13 10:28:47] 2026-01-13 08:28:01,316 | INFO     | event service: False
[2026-01-13 10:28:47] 2026-01-13 08:28:01,316 | INFO     | sizes: {0: 2283888, 1: 2284143, 3: 2284405, 11: 2284433, 4566: 2319735, 4569: 2319735, 4574: 2320057}
[2026-01-13 10:28:47] 2026-01-13 08:28:01,316 | INFO     | --------------------------------------------------
[2026-01-13 10:28:47] 2026-01-13 08:28:01,316 | INFO     | 
[2026-01-13 10:28:47] 2026-01-13 08:28:01,316 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2026-01-13 10:28:47] 2026-01-13 08:28:01,327 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 10:28:47] 2026-01-13 08:28:01,327 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 10:28:47] 2026-01-13 08:28:01,327 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 10:28:47] 2026-01-13 08:28:01,327 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 10:28:47] 2026-01-13 08:28:01,327 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 10:28:47] 2026-01-13 08:28:01,327 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 10:28:47] 2026-01-13 08:28:01,327 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 10:28:47] 2026-01-13 08:28:01,327 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 10:28:47] 2026-01-13 08:28:01,327 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 10:28:47] 2026-01-13 08:28:01,327 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 10:28:47] 2026-01-13 08:28:01,327 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 10:28:47] 2026-01-13 08:28:01,327 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 10:28:47] 2026-01-13 08:28:01,327 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 10:28:47] 2026-01-13 08:28:01,327 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 10:28:47] 2026-01-13 08:28:01,327 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 10:28:47] 2026-01-13 08:28:01,327 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 10:28:47] 2026-01-13 08:28:01,327 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 10:28:47] 2026-01-13 08:28:01,327 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 10:28:47] 2026-01-13 08:28:01,327 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 10:28:47] 2026-01-13 08:28:01,327 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 10:28:47] 2026-01-13 08:28:01,327 | INFO     | job 6967163144 has completed (purged errors)
[2026-01-13 10:28:47] 2026-01-13 08:28:01,327 | INFO     | overall cleanup function is called
[2026-01-13 10:28:47] 2026-01-13 08:28:02,334 | INFO     | --- collectZombieJob: --- 10, [469312]
[2026-01-13 10:28:47] 2026-01-13 08:28:02,334 | INFO     | zombie collector waiting for pid 469312
[2026-01-13 10:28:47] 2026-01-13 08:28:02,334 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 10:28:47] 2026-01-13 08:28:02,334 | INFO     | collected zombie processes
[2026-01-13 10:28:47] 2026-01-13 08:28:02,335 | INFO     | will attempt to kill all subprocesses of pid=469312
[2026-01-13 10:28:47] 2026-01-13 08:28:02,441 | INFO     | process IDs to be killed: [469312] (in reverse order)
[2026-01-13 10:28:47] 2026-01-13 08:28:02,472 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 10:28:47] 2026-01-13 08:28:02,473 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 10:28:47] 2026-01-13 08:28:02,476 | INFO     | did not find any defunct processes belonging to 469312
[2026-01-13 10:28:47] 2026-01-13 08:28:02,479 | INFO     | did not find any defunct processes belonging to 469312
[2026-01-13 10:28:47] 2026-01-13 08:28:02,479 | INFO     | ready for new job
[2026-01-13 10:28:47] 2026-01-13 08:28:02,480 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 10:28:47] 2026-01-13 08:28:02,481 | INFO     | ***************************************
[2026-01-13 10:28:47] 2026-01-13 08:28:02,481 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 10:28:47] 2026-01-13 08:28:02,481 | INFO     | ***************************************
[2026-01-13 10:28:47] 2026-01-13 08:28:02,481 | INFO     | 
[2026-01-13 10:28:47] 2026-01-13 08:28:02,482 | INFO     | architecture information:
[2026-01-13 10:28:47] 2026-01-13 08:28:02,482 | INFO     | executing command: cat /etc/os-release
[2026-01-13 10:28:47] 2026-01-13 08:28:02,489 | INFO     | cat /etc/os-release:
[2026-01-13 10:28:47] NAME="CentOS Linux"
[2026-01-13 10:28:47] VERSION="7 (Core)"
[2026-01-13 10:28:47] ID="centos"
[2026-01-13 10:28:47] ID_LIKE="rhel fedora"
[2026-01-13 10:28:47] VERSION_ID="7"
[2026-01-13 10:28:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 10:28:47] ANSI_COLOR="0;31"
[2026-01-13 10:28:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 10:28:47] HOME_URL="https://www.centos.org/"
[2026-01-13 10:28:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 10:28:47] 
[2026-01-13 10:28:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 10:28:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 10:28:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 10:28:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 10:28:47] 
[2026-01-13 10:28:47] 2026-01-13 08:28:02,489 | INFO     | ***************************************
[2026-01-13 10:28:47] 2026-01-13 08:28:02,992 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2026-01-13 10:28:47] 2026-01-13 08:28:02,999 | INFO     | sufficient remaining disk space (47781511168 B)
[2026-01-13 10:28:47] 2026-01-13 08:28:03,000 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 10:28:47] 2026-01-13 08:28:03,000 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 10:28:47] 2026-01-13 08:28:03,000 | INFO     | update_server=False
[2026-01-13 10:28:47] 2026-01-13 08:28:03,000 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 10:28:47] 2026-01-13 08:28:03,000 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 10:28:47] 2026-01-13 08:28:03,000 | INFO     | aborting loop
[2026-01-13 10:28:47] 2026-01-13 08:28:03,000 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 10:28:47] 2026-01-13 08:28:03,000 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 10:28:47] 2026-01-13 08:28:03,364 | INFO     | all data control threads have been joined
[2026-01-13 10:28:47] 2026-01-13 08:28:04,005 | INFO     | [job] retrieve thread has finished
[2026-01-13 10:28:47] 2026-01-13 08:28:04,005 | INFO     | [job] job monitor thread has finished
[2026-01-13 10:28:47] 2026-01-13 08:28:04,006 | INFO     | [job] queue monitor thread has finished
[2026-01-13 10:28:47] 2026-01-13 08:28:04,078 | INFO     | [payload] validate_post thread has finished
[2026-01-13 10:28:47] 2026-01-13 08:28:04,229 | INFO     | all payload control threads have been joined
[2026-01-13 10:28:47] 2026-01-13 08:28:04,288 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 10:28:47] 2026-01-13 08:28:04,369 | INFO     | [data] control thread has finished
[2026-01-13 10:28:47] 2026-01-13 08:28:04,572 | INFO     | all job control threads have been joined
[2026-01-13 10:28:47] 2026-01-13 08:28:04,811 | INFO     | [job] validate thread has finished
[2026-01-13 10:28:47] 2026-01-13 08:28:04,878 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 10:28:47] 2026-01-13 08:28:04,895 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 10:28:47] 2026-01-13 08:28:04,952 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 10:28:47] 2026-01-13 08:28:04,967 | INFO     | [payload] failed_post thread has finished
[2026-01-13 10:28:47] 2026-01-13 08:28:05,234 | INFO     | [payload] control thread has finished
[2026-01-13 10:28:47] 2026-01-13 08:28:05,434 | INFO     | [data] copytool_in thread has finished
[2026-01-13 10:28:47] 2026-01-13 08:28:05,577 | INFO     | [job] control thread has finished
[2026-01-13 10:28:47] 2026-01-13 08:28:06,294 | INFO     | [data] copytool_out thread has finished
[2026-01-13 10:28:47] 2026-01-13 08:28:07,006 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 10:28:47] 2026-01-13 08:28:13,986 | INFO     | job.realtimelogging is not enabled
[2026-01-13 10:28:47] 2026-01-13 08:28:14,991 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 10:28:47] 2026-01-13 08:28:32,800 | INFO     | PID=449427 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-13 10:28:47] 2026-01-13 08:28:32,800 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 10:28:47] 2026-01-13 08:28:32,800 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 10:28:47] 2026-01-13 08:28:32,800 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 10:28:47] 2026-01-13 08:28:42,137 | INFO     | [monitor] cgroup control has ended
[2026-01-13 10:28:47] 2026-01-13 08:28:42,517 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140573014832960)>', '<ExcThread(monitor, started 140572383762176)>']
[2026-01-13 10:28:47] 2026-01-13 08:28:42,850 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 10:28:47] 2026-01-13 08:28:42,850 | INFO     | [monitor] control thread has ended
[2026-01-13 10:28:47] 2026-01-13 08:28:47,542 | INFO     | all workflow threads have been joined
[2026-01-13 10:28:47] 2026-01-13 08:28:47,543 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 10:28:47] 2026-01-13 08:28:47,543 | INFO     | traces error code: 0
[2026-01-13 10:28:47] 2026-01-13 08:28:47,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 10:28:47] 2026-01-13 08:28:47,596 [wrapper] ==== pilot stdout END ====
[2026-01-13 10:28:47] 2026-01-13 08:28:47,597 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 10:28:47] 2026-01-13 08:28:47,599 [wrapper] pilotpid: 449427
[2026-01-13 10:28:47] 2026-01-13 08:28:47,600 [wrapper] Pilot exit status: 0
[2026-01-13 10:28:47] 2026-01-13 08:28:47,606 [wrapper] pandaids: 6967163144
[2026-01-13 10:28:47] 2026-01-13 08:28:47,629 [wrapper] cleanup supervisor_pilot  514118 449428
[2026-01-13 10:28:47] 2026-01-13 08:28:47,631 [wrapper] Test setup, not cleaning
[2026-01-13 10:28:47] 2026-01-13 08:28:47,633 [wrapper] apfmon messages muted
[2026-01-13 10:28:47] 2026-01-13 08:28:47,634 [wrapper] ==== wrapper stdout END ====
[2026-01-13 10:28:47] 2026-01-13 08:28:47,636 [wrapper] ==== wrapper stderr END ====
[2026-01-13 10:28:47]  *** Error codes and diagnostics ***
[2026-01-13 10:28:47]     "exeErrorCode": 0,
[2026-01-13 10:28:47]     "exeErrorDiag": "",
[2026-01-13 10:28:47]     "pilotErrorCode": 0,
[2026-01-13 10:28:47]     "pilotErrorDiag": "",
[2026-01-13 10:28:47]  *** Listing of results directory ***
[2026-01-13 10:28:47] total 563028
[2026-01-13 10:28:47] -rw-r--r-- 1 ek ek    579449 Jan 12 18:03 pilot3.tar.gz
[2026-01-13 10:28:47] -rwx------ 1 ek ek     36322 Jan 12 18:06 runpilot2-wrapper.sh
[2026-01-13 10:28:47] -rw-r--r-- 1 ek ek      5112 Jan 12 18:06 queuedata.json
[2026-01-13 10:28:47] -rw-rw-r-- 1 ek ek       100 Jan 13 09:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 10:28:47] -rwxr-xr-x 1 ek ek      7986 Jan 13 09:11 run_atlas
[2026-01-13 10:28:47] -rw-rw-r-- 1 ek ek       105 Jan 13 09:11 job.xml
[2026-01-13 10:28:47] -rw-r--r-- 2 ek ek 313799512 Jan 13 09:11 EVNT.48188646._000009.pool.root.1
[2026-01-13 10:28:47] drwxrwx--x 2 ek ek      4096 Jan 13 09:11 shared
[2026-01-13 10:28:47] -rw-r--r-- 2 ek ek    592403 Jan 13 09:11 input.tar.gz
[2026-01-13 10:28:47] -rw-r--r-- 2 ek ek     15847 Jan 13 09:11 start_atlas.sh
[2026-01-13 10:28:47] -rw-rw-r-- 1 ek ek         0 Jan 13 09:11 boinc_setup_complete
[2026-01-13 10:28:47] -rw-rw-r-- 1 ek ek      9841 Jan 13 09:11 init_data.xml
[2026-01-13 10:28:47] -rw-rw-r-- 1 ek ek         0 Jan 13 09:11 boinc_lockfile
[2026-01-13 10:28:47] -rw-rw-r-- 1 ek ek      2623 Jan 13 09:11 pandaJob.out
[2026-01-13 10:28:47] -rw------- 1 ek ek        50 Jan 13 09:11 setup.sh.local
[2026-01-13 10:28:47] -rw------- 1 ek ek    993374 Jan 13 09:11 agis_schedconf.cvmfs.json
[2026-01-13 10:28:47] -rw------- 1 ek ek   1516240 Jan 13 09:11 agis_ddmendpoints.agis.ALL.json
[2026-01-13 10:28:47] drwx------ 5 ek ek      4096 Jan 13 09:11 pilot3
[2026-01-13 10:28:47] -rw------- 1 ek ek 256857848 Jan 13 10:27 HITS.48188648._000041.pool.root.1
[2026-01-13 10:28:47] -rw-rw-r-- 1 ek ek       529 Jan 13 10:27 boinc_task_state.xml
[2026-01-13 10:28:47] -rw------- 1 ek ek      1015 Jan 13 10:27 memory_monitor_summary.json
[2026-01-13 10:28:47] -rw------- 1 ek ek    303673 Jan 13 10:27 log.48188648._000041.job.log.tgz.1
[2026-01-13 10:28:47] -rw------- 1 ek ek      7748 Jan 13 10:28 heartbeat.json
[2026-01-13 10:28:47] -rw------- 1 ek ek        95 Jan 13 10:28 pilot_heartbeat.json
[2026-01-13 10:28:47] -rw-rw-r-- 1 ek ek      8192 Jan 13 10:28 boinc_mmap_file
[2026-01-13 10:28:47] -rw-rw-r-- 1 ek ek        27 Jan 13 10:28 wrapper_checkpoint.txt
[2026-01-13 10:28:47] -rw------- 1 ek ek      4819 Jan 13 10:28 pilotlog.txt
[2026-01-13 10:28:47] -rw------- 1 ek ek    673529 Jan 13 10:28 log.48188648._000041.job.log.1
[2026-01-13 10:28:47] -rw------- 1 ek ek       357 Jan 13 10:28 output.list
[2026-01-13 10:28:47] -rw-rw-r-- 1 ek ek       620 Jan 13 10:28 runtime_log
[2026-01-13 10:28:47] -rw------- 1 ek ek    993280 Jan 13 10:28 result.tar.gz
[2026-01-13 10:28:47] -rw-rw-r-- 1 ek ek      9502 Jan 13 10:28 runtime_log.err
[2026-01-13 10:28:47] -rw------- 1 ek ek       660 Jan 13 10:28 46sNDmGcZz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWinKDmfEtDKm.diag
[2026-01-13 10:28:47] -rw-rw-r-- 1 ek ek     21587 Jan 13 10:28 stderr.txt
[2026-01-13 10:28:47] HITS file was successfully produced:
[2026-01-13 10:28:47] -rw------- 1 ek ek 256857848 Jan 13 10:27 shared/HITS.pool.root.1
[2026-01-13 10:28:47]  *** Contents of shared directory: ***
[2026-01-13 10:28:47] total 558864
[2026-01-13 10:28:47] -rw-r--r-- 2 ek ek 313799512 Jan 13 09:11 ATLAS.root_0
[2026-01-13 10:28:47] -rw-r--r-- 2 ek ek    592403 Jan 13 09:11 input.tar.gz
[2026-01-13 10:28:47] -rw-r--r-- 2 ek ek     15847 Jan 13 09:11 start_atlas.sh
[2026-01-13 10:28:47] -rw------- 1 ek ek 256857848 Jan 13 10:27 HITS.pool.root.1
[2026-01-13 10:28:47] -rw------- 1 ek ek    993280 Jan 13 10:28 result.tar.gz
10:28:49 (441974): run_atlas exited; CPU time 17584.900300
10:28:49 (441974): called boinc_finish(0)

</stderr_txt>
]]>

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