Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:39:42 (1159620): wrapper (7.7.26015): starting
13:39:42 (1159620): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 13:39:42] Arguments: --nthreads 8
[2026-01-12 13:39:42] Threads: 8
[2026-01-12 13:39:42] Checking for CVMFS
[2026-01-12 13:39:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 13:39:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 13:39:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 13:39:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 13:39:44] 2.13.3.0 5581 26050 173380 155062 2 193 37816917 39288833 5043 16776704 0 11488854 99.571 15333644 41368 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 13:39:44] CVMFS is ok
[2026-01-12 13:39:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 13:39:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 13:39:44] Further information can be found at the LHC@home message board.
[2026-01-12 13:39:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 13:39:44] Checking for apptainer binary...
[2026-01-12 13:39:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 13:39:44] Running /usr/bin/apptainer --version
[2026-01-12 13:39:44] apptainer version 1.4.5-2.el9
[2026-01-12 13:39:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 13:39:45] c-210-5.aglt2.org
[2026-01-12 13:39:45] apptainer works
[2026-01-12 13:39:45] Set ATHENA_PROC_NUMBER=8
[2026-01-12 13:39:45] Set ATHENA_CORE_NUMBER=8
[2026-01-12 13:39:45] Starting ATLAS job with PandaID=6967368413
[2026-01-12 13:39:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 19:23:10]  *** The last 200 lines of the pilot log: ***
[2026-01-12 19:23:10] 2026-01-13 00:22:15,191 | INFO     | time since job start (20472s) is within the limit (349056.0s)
[2026-01-12 19:23:10] 2026-01-13 00:22:16,906 | INFO     | monitor loop #1150: job 0:6967368413 is in state 'finished'
[2026-01-12 19:23:10] 2026-01-13 00:22:17,099 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 19:23:10] 2026-01-13 00:22:17,201 | INFO     | time since job start (20474s) is within the limit (349056.0s)
[2026-01-12 19:23:10] 2026-01-13 00:22:19,212 | INFO     | time since job start (20476s) is within the limit (349056.0s)
[2026-01-12 19:23:10] 2026-01-13 00:22:19,650 | INFO     | monitor loop #1151: job 0:6967368413 is in state 'finished'
[2026-01-12 19:23:10] 2026-01-13 00:22:19,650 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 19:23:10] 2026-01-13 00:22:21,228 | INFO     | time since job start (20478s) is within the limit (349056.0s)
[2026-01-12 19:23:10] 2026-01-13 00:22:22,198 | INFO     | monitor loop #1152: job 0:6967368413 is in state 'finished'
[2026-01-12 19:23:10] 2026-01-13 00:22:22,222 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 19:23:10] 2026-01-13 00:22:23,235 | INFO     | time since job start (20480s) is within the limit (349056.0s)
[2026-01-12 19:23:10] 2026-01-13 00:22:24,743 | INFO     | monitor loop #1153: job 0:6967368413 is in state 'finished'
[2026-01-12 19:23:10] 2026-01-13 00:22:24,743 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 19:23:10] 2026-01-13 00:22:25,242 | INFO     | time since job start (20482s) is within the limit (349056.0s)
[2026-01-12 19:23:10] 2026-01-13 00:22:27,248 | INFO     | monitor loop #1154: job 0:6967368413 is in state 'finished'
[2026-01-12 19:23:10] 2026-01-13 00:22:27,274 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 19:23:10] 2026-01-13 00:22:27,249 | INFO     | time since job start (20484s) is within the limit (349056.0s)
[2026-01-12 19:23:10] 2026-01-13 00:22:29,289 | INFO     | time since job start (20486s) is within the limit (349056.0s)
[2026-01-12 19:23:10] 2026-01-13 00:22:29,555 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 19:23:10] 2026-01-13 00:22:29,566 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8636500000002
[2026-01-12 19:23:10] 2026-01-13 00:22:29,581 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6967368413/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 19:23:10] 2026-01-13 00:22:29,582 | INFO     | extracted standard info from prmon json
[2026-01-12 19:23:10] 2026-01-13 00:22:29,582 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 19:23:10] 2026-01-13 00:22:29,586 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 19:23:10] 2026-01-13 00:22:29,597 | INFO     | fitting pss+swap vs Time
[2026-01-12 19:23:10] 2026-01-13 00:22:29,597 | INFO     | sum of square deviations: 11346174553.671734
[2026-01-12 19:23:10] 2026-01-13 00:22:29,604 | INFO     | sum of deviations: 99422186345.22592
[2026-01-12 19:23:10] 2026-01-13 00:22:29,605 | INFO     | mean x: 1768253538.563253
[2026-01-12 19:23:10] 2026-01-13 00:22:29,605 | INFO     | mean y: 2318039.3463855423
[2026-01-12 19:23:10] 2026-01-13 00:22:29,605 | INFO     | intersect: -15492211150.648233
[2026-01-12 19:23:10] 2026-01-13 00:22:29,606 | INFO     | chi2: 19.541724810365373
[2026-01-12 19:23:10] 2026-01-13 00:22:29,607 | INFO     | sum of square deviations: 10841954230.354813
[2026-01-12 19:23:10] 2026-01-13 00:22:29,610 | INFO     | sum of deviations: 186640500947.22946
[2026-01-12 19:23:10] 2026-01-13 00:22:29,610 | INFO     | mean x: 1768253386.180428
[2026-01-12 19:23:10] 2026-01-13 00:22:29,611 | INFO     | mean y: 2344426.5045871558
[2026-01-12 19:23:10] 2026-01-13 00:22:29,611 | INFO     | intersect: -30437527462.4906
[2026-01-12 19:23:10] 2026-01-13 00:22:29,616 | INFO     | chi2: 16.280822570696397
[2026-01-12 19:23:10] 2026-01-13 00:22:29,616 | INFO     | current chi2=16.280822570696397 (change=16.686870126936387 %)
[2026-01-12 19:23:10] 2026-01-13 00:22:29,617 | INFO     | right removable region: 326
[2026-01-12 19:23:10] 2026-01-13 00:22:29,617 | INFO     | sum of square deviations: 10840362223.620762
[2026-01-12 19:23:10] 2026-01-13 00:22:29,624 | INFO     | sum of deviations: -7197690159.795109
[2026-01-12 19:23:10] 2026-01-13 00:22:29,624 | INFO     | mean x: 1768253691.1865444
[2026-01-12 19:23:10] 2026-01-13 00:22:29,624 | INFO     | mean y: 2350189.4556574924
[2026-01-12 19:23:10] 2026-01-13 00:22:29,625 | INFO     | intersect: 1176420015.7703488
[2026-01-12 19:23:10] 2026-01-13 00:22:29,625 | INFO     | chi2: 14.995083275479516
[2026-01-12 19:23:10] 2026-01-13 00:22:29,625 | INFO     | current chi2=14.995083275479516 (change=23.266326688185764 %)
[2026-01-12 19:23:10] 2026-01-13 00:22:29,625 | INFO     | left removable region: 10
[2026-01-12 19:23:10] 2026-01-13 00:22:29,626 | INFO     | sum of square deviations: 9782783844.085455
[2026-01-12 19:23:10] 2026-01-13 00:22:29,633 | INFO     | sum of deviations: 11081074449.655064
[2026-01-12 19:23:10] 2026-01-13 00:22:29,633 | INFO     | mean x: 1768253660.9462025
[2026-01-12 19:23:10] 2026-01-13 00:22:29,633 | INFO     | mean y: 2409803.920886076
[2026-01-12 19:23:10] 2026-01-13 00:22:29,633 | INFO     | intersect: -2000511938.5099626
[2026-01-12 19:23:10] 2026-01-13 00:22:29,634 | INFO     | chi2: 8.416014376707535
[2026-01-12 19:23:10] 2026-01-13 00:22:29,634 | INFO     | current memory leak: 1.13 B/s (using 316 data points, chi2=8.42)
[2026-01-12 19:23:10] 2026-01-13 00:22:29,635 | INFO     | could have reported an average CPU frequency of 2599 MHz (15 samples)
[2026-01-12 19:23:10] 2026-01-13 00:22:29,635 | INFO     | ..............................
[2026-01-12 19:23:10] 2026-01-13 00:22:29,635 | INFO     | . Timing measurements:
[2026-01-12 19:23:10] 2026-01-13 00:22:29,635 | INFO     | . get job = 0 s
[2026-01-12 19:23:10] 2026-01-13 00:22:29,639 | INFO     | . initial setup = 6 s
[2026-01-12 19:23:10] 2026-01-13 00:22:29,639 | INFO     | . payload setup = 63 s
[2026-01-12 19:23:10] 2026-01-13 00:22:29,639 | INFO     | . stage-in = 0 s
[2026-01-12 19:23:10] 2026-01-13 00:22:29,639 | INFO     | . payload execution = 20282 s
[2026-01-12 19:23:10] 2026-01-13 00:22:29,639 | INFO     | . stage-out = 8 s
[2026-01-12 19:23:10] 2026-01-13 00:22:29,640 | INFO     | . log creation = 1 s
[2026-01-12 19:23:10] 2026-01-13 00:22:29,640 | INFO     | ..............................
[2026-01-12 19:23:10] 2026-01-13 00:22:29,869 | INFO     | 
[2026-01-12 19:23:10] 2026-01-13 00:22:29,869 | INFO     | job summary report
[2026-01-12 19:23:10] 2026-01-13 00:22:29,870 | INFO     | --------------------------------------------------
[2026-01-12 19:23:10] 2026-01-13 00:22:29,870 | INFO     | PanDA job id: 6967368413
[2026-01-12 19:23:10] 2026-01-13 00:22:29,870 | INFO     | task id: 47962010
[2026-01-12 19:23:10] 2026-01-13 00:22:29,870 | INFO     | errors: (none)
[2026-01-12 19:23:10] 2026-01-13 00:22:29,870 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 19:23:10] 2026-01-13 00:22:29,870 | INFO     | pilot state: finished 
[2026-01-12 19:23:10] 2026-01-13 00:22:29,870 | INFO     | transexitcode: 0
[2026-01-12 19:23:10] 2026-01-13 00:22:29,870 | INFO     | exeerrorcode: 0
[2026-01-12 19:23:10] 2026-01-13 00:22:29,870 | INFO     | exeerrordiag: 
[2026-01-12 19:23:10] 2026-01-13 00:22:29,871 | INFO     | exitcode: 0
[2026-01-12 19:23:10] 2026-01-13 00:22:29,871 | INFO     | exitmsg: OK
[2026-01-12 19:23:10] 2026-01-13 00:22:29,871 | INFO     | cpuconsumptiontime: 19307 s
[2026-01-12 19:23:10] 2026-01-13 00:22:29,871 | INFO     | nevents: 50
[2026-01-12 19:23:10] 2026-01-13 00:22:29,871 | INFO     | neventsw: 0
[2026-01-12 19:23:10] 2026-01-13 00:22:29,871 | INFO     | pid: 1174012
[2026-01-12 19:23:10] 2026-01-13 00:22:29,871 | INFO     | pgrp: 1174012
[2026-01-12 19:23:10] 2026-01-13 00:22:29,871 | INFO     | corecount: 8
[2026-01-12 19:23:10] 2026-01-13 00:22:29,871 | INFO     | event service: False
[2026-01-12 19:23:10] 2026-01-13 00:22:29,872 | INFO     | sizes: {0: 2284397, 1: 2284596, 2: 2284596, 13: 2284624, 24: 2284680, 33: 2284970, 35: 2285154, 20351: 2319174, 20352: 2319173, 20361: 2328223, 20365: 2328279, 204
[2026-01-12 19:23:10] 2026-01-13 00:22:29,872 | INFO     | --------------------------------------------------
[2026-01-12 19:23:10] 2026-01-13 00:22:29,872 | INFO     | 
[2026-01-12 19:23:10] 2026-01-13 00:22:29,872 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-12 19:23:10] 2026-01-13 00:22:30,149 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 19:23:10] 2026-01-13 00:22:30,150 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 19:23:10] 2026-01-13 00:22:30,150 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 19:23:10] 2026-01-13 00:22:30,150 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 19:23:10] 2026-01-13 00:22:30,150 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 19:23:10] 2026-01-13 00:22:30,150 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 19:23:10] 2026-01-13 00:22:30,150 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 19:23:10] 2026-01-13 00:22:30,150 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 19:23:10] 2026-01-13 00:22:30,151 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 19:23:10] 2026-01-13 00:22:30,151 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 19:23:10] 2026-01-13 00:22:30,151 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 19:23:10] 2026-01-13 00:22:30,151 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 19:23:10] 2026-01-13 00:22:30,151 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 19:23:10] 2026-01-13 00:22:30,151 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 19:23:10] 2026-01-13 00:22:30,151 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 19:23:10] 2026-01-13 00:22:30,151 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 19:23:10] 2026-01-13 00:22:30,151 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 19:23:10] 2026-01-13 00:22:30,152 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 19:23:10] 2026-01-13 00:22:30,152 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 19:23:10] 2026-01-13 00:22:30,152 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 19:23:10] 2026-01-13 00:22:30,152 | INFO     | job 6967368413 has completed (purged errors)
[2026-01-12 19:23:10] 2026-01-13 00:22:30,152 | INFO     | overall cleanup function is called
[2026-01-12 19:23:10] 2026-01-13 00:22:31,256 | INFO     | --- collectZombieJob: --- 10, [1174012]
[2026-01-12 19:23:10] 2026-01-13 00:22:31,256 | INFO     | zombie collector waiting for pid 1174012
[2026-01-12 19:23:10] 2026-01-13 00:22:31,256 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 19:23:10] 2026-01-13 00:22:31,257 | INFO     | collected zombie processes
[2026-01-12 19:23:10] 2026-01-13 00:22:31,257 | INFO     | will attempt to kill all subprocesses of pid=1174012
[2026-01-12 19:23:10] 2026-01-13 00:22:34,066 | INFO     | process IDs to be killed: [1174012] (in reverse order)
[2026-01-12 19:23:10] 2026-01-13 00:22:34,571 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 19:23:10] 2026-01-13 00:22:34,571 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 19:23:10] 2026-01-13 00:22:34,611 | INFO     | did not find any defunct processes belonging to 1174012
[2026-01-12 19:23:10] 2026-01-13 00:22:34,663 | INFO     | did not find any defunct processes belonging to 1174012
[2026-01-12 19:23:10] 2026-01-13 00:22:34,664 | INFO     | ready for new job
[2026-01-12 19:23:10] 2026-01-13 00:22:34,664 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 19:23:10] 2026-01-13 00:22:34,686 | INFO     | ***************************************
[2026-01-12 19:23:10] 2026-01-13 00:22:34,687 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 19:23:10] 2026-01-13 00:22:34,687 | INFO     | ***************************************
[2026-01-12 19:23:10] 2026-01-13 00:22:34,687 | INFO     | 
[2026-01-12 19:23:10] 2026-01-13 00:22:34,689 | INFO     | architecture information:
[2026-01-12 19:23:10] 2026-01-13 00:22:34,710 | INFO     | executing command: cat /etc/os-release
[2026-01-12 19:23:10] 2026-01-13 00:22:34,760 | INFO     | cat /etc/os-release:
[2026-01-12 19:23:10] NAME="CentOS Linux"
[2026-01-12 19:23:10] VERSION="7 (Core)"
[2026-01-12 19:23:10] ID="centos"
[2026-01-12 19:23:10] ID_LIKE="rhel fedora"
[2026-01-12 19:23:10] VERSION_ID="7"
[2026-01-12 19:23:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 19:23:10] ANSI_COLOR="0;31"
[2026-01-12 19:23:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 19:23:10] HOME_URL="https://www.centos.org/"
[2026-01-12 19:23:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 19:23:10] 
[2026-01-12 19:23:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 19:23:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 19:23:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 19:23:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 19:23:10] 
[2026-01-12 19:23:10] 2026-01-13 00:22:34,761 | INFO     | ***************************************
[2026-01-12 19:23:10] 2026-01-13 00:22:35,263 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-12 19:23:10] 2026-01-13 00:22:35,406 | INFO     | sufficient remaining disk space (51889831936 B)
[2026-01-12 19:23:10] 2026-01-13 00:22:35,407 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 19:23:10] 2026-01-13 00:22:35,407 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 19:23:10] 2026-01-13 00:22:35,407 | INFO     | update_server=False
[2026-01-12 19:23:10] 2026-01-13 00:22:35,407 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 19:23:10] 2026-01-13 00:22:35,408 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 19:23:10] 2026-01-13 00:22:35,408 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 19:23:10] 2026-01-13 00:22:35,651 | INFO     | all payload control threads have been joined
[2026-01-12 19:23:10] 2026-01-13 00:22:35,758 | INFO     | all data control threads have been joined
[2026-01-12 19:23:10] 2026-01-13 00:22:35,853 | INFO     | all job control threads have been joined
[2026-01-12 19:23:10] 2026-01-13 00:22:36,011 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 19:23:10] 2026-01-13 00:22:36,057 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 19:23:10] 2026-01-13 00:22:36,057 | INFO     | aborting loop
[2026-01-12 19:23:10] 2026-01-13 00:22:36,413 | INFO     | [job] retrieve thread has finished
[2026-01-12 19:23:10] 2026-01-13 00:22:36,420 | INFO     | [job] queue monitor thread has finished
[2026-01-12 19:23:10] 2026-01-13 00:22:36,657 | INFO     | [payload] control thread has finished
[2026-01-12 19:23:10] 2026-01-13 00:22:36,764 | INFO     | [data] control thread has finished
[2026-01-12 19:23:10] 2026-01-13 00:22:36,859 | INFO     | [job] control thread has finished
[2026-01-12 19:23:10] 2026-01-13 00:22:37,063 | INFO     | [job] job monitor thread has finished
[2026-01-12 19:23:10] 2026-01-13 00:22:37,299 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 19:23:10] 2026-01-13 00:22:37,334 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 19:23:10] 2026-01-13 00:22:37,338 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 19:23:10] 2026-01-13 00:22:37,338 | INFO     | [job] validate thread has finished
[2026-01-12 19:23:10] 2026-01-13 00:22:37,339 | INFO     | [data] copytool_in thread has finished
[2026-01-12 19:23:10] 2026-01-13 00:22:37,443 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 19:23:10] 2026-01-13 00:22:37,593 | INFO     | [payload] validate_post thread has finished
[2026-01-12 19:23:10] 2026-01-13 00:22:37,644 | INFO     | [payload] failed_post thread has finished
[2026-01-12 19:23:10] 2026-01-13 00:22:38,018 | INFO     | [data] copytool_out thread has finished
[2026-01-12 19:23:10] 2026-01-13 00:22:39,417 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 19:23:10] 2026-01-13 00:22:42,247 | INFO     | [monitor] cgroup control has ended
[2026-01-12 19:23:10] 2026-01-13 00:22:42,702 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139816462366528)>', '<ExcThread(monitor, started 139815991363328)>']
[2026-01-12 19:23:10] 2026-01-13 00:22:47,728 | INFO     | all workflow threads have been joined
[2026-01-12 19:23:10] 2026-01-13 00:22:47,732 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 19:23:10] 2026-01-13 00:22:47,736 | INFO     | traces error code: 0
[2026-01-12 19:23:10] 2026-01-13 00:22:47,737 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 19:23:10] 2026-01-13 00:23:06,152 | INFO     | PID=1165032 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 19:23:10] 2026-01-13 00:23:06,345 | INFO     | .. there are 8 such processes running
[2026-01-12 19:23:10] 2026-01-13 00:23:06,346 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 19:23:10] 2026-01-13 00:23:06,346 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 19:23:10] 2026-01-13 00:23:06,346 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 19:23:10] 2026-01-13 00:23:06,346 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 19:23:10] 2026-01-13 00:23:06,346 | INFO     | [monitor] control thread has ended
[2026-01-12 19:23:10] 2026-01-13 00:23:09,118 [wrapper] ==== pilot stdout END ====
[2026-01-12 19:23:10] 2026-01-13 00:23:09,151 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 19:23:10] 2026-01-13 00:23:09,179 [wrapper] pilotpid: 1165032
[2026-01-12 19:23:10] 2026-01-13 00:23:09,216 [wrapper] Pilot exit status: 0
[2026-01-12 19:23:10] 2026-01-13 00:23:09,345 [wrapper] pandaids: 6967368413
[2026-01-12 19:23:10] 2026-01-13 00:23:09,404 [wrapper] cleanup supervisor_pilot 1701136 1165033
[2026-01-12 19:23:10] 2026-01-13 00:23:09,435 [wrapper] Test setup, not cleaning
[2026-01-12 19:23:10] 2026-01-13 00:23:09,487 [wrapper] apfmon messages muted
[2026-01-12 19:23:10] 2026-01-13 00:23:09,531 [wrapper] ==== wrapper stdout END ====
[2026-01-12 19:23:10] 2026-01-13 00:23:09,554 [wrapper] ==== wrapper stderr END ====
[2026-01-12 19:23:10]  *** Error codes and diagnostics ***
[2026-01-12 19:23:10]     "exeErrorCode": 0,
[2026-01-12 19:23:10]     "exeErrorDiag": "",
[2026-01-12 19:23:10]     "pilotErrorCode": 0,
[2026-01-12 19:23:10]     "pilotErrorDiag": "",
[2026-01-12 19:23:10]  *** Listing of results directory ***
[2026-01-12 19:23:10] total 439340
[2026-01-12 19:23:10] -rw-r--r--. 1 boincer umatlas    579449 Jan 12 12:19 pilot3.tar.gz
[2026-01-12 19:23:10] -rw-r--r--. 1 boincer umatlas      5112 Jan 12 12:49 queuedata.json
[2026-01-12 19:23:10] -rwx------. 1 boincer umatlas     36322 Jan 12 12:53 runpilot2-wrapper.sh
[2026-01-12 19:23:10] -rw-r--r--. 1 boincer umatlas       100 Jan 12 13:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 19:23:10] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 12 13:39 run_atlas
[2026-01-12 19:23:10] -rw-r--r--. 1 boincer umatlas       105 Jan 12 13:39 job.xml
[2026-01-12 19:23:10] -rw-r--r--. 2 boincer umatlas 393999209 Jan 12 13:39 EVNT.47962006._000095.pool.root.1
[2026-01-12 19:23:10] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 13:39 start_atlas.sh
[2026-01-12 19:23:10] drwxrwx--x. 2 boincer umatlas      4096 Jan 12 13:39 shared
[2026-01-12 19:23:10] -rw-r--r--. 2 boincer umatlas    592617 Jan 12 13:39 input.tar.gz
[2026-01-12 19:23:10] -rw-r--r--. 1 boincer umatlas         0 Jan 12 13:39 boinc_lockfile
[2026-01-12 19:23:10] -rw-r--r--. 1 boincer umatlas      2889 Jan 12 13:39 pandaJob.out
[2026-01-12 19:23:10] -rw-------. 1 boincer umatlas        57 Jan 12 13:39 setup.sh.local
[2026-01-12 19:23:10] -rw-------. 1 boincer umatlas    988539 Jan 12 13:40 agis_schedconf.cvmfs.json
[2026-01-12 19:23:10] drwx------. 5 boincer umatlas      4096 Jan 12 13:41 pilot3
[2026-01-12 19:23:10] -rw-r--r--. 1 boincer umatlas       530 Jan 12 18:15 boinc_task_state.xml
[2026-01-12 19:23:10] -rw-------. 1 boincer umatlas  44278818 Jan 12 19:20 HITS.47962010._003379.pool.root.1
[2026-01-12 19:23:10] -rw-r--r--. 1 boincer umatlas      6659 Jan 12 19:20 init_data.xml
[2026-01-12 19:23:10] -rw-------. 1 boincer umatlas      1044 Jan 12 19:21 memory_monitor_summary.json
[2026-01-12 19:23:10] -rw-------. 1 boincer umatlas   1516240 Jan 12 19:21 agis_ddmendpoints.agis.ALL.json
[2026-01-12 19:23:10] -rw-------. 1 boincer umatlas   1381350 Jan 12 19:21 log.47962010._003379.job.log.tgz.1
[2026-01-12 19:23:10] -rw-------. 1 boincer umatlas        95 Jan 12 19:22 pilot_heartbeat.json
[2026-01-12 19:23:10] -rw-------. 1 boincer umatlas      8577 Jan 12 19:22 heartbeat.json
[2026-01-12 19:23:10] -rw-------. 1 boincer umatlas       822 Jan 12 19:23 pilotlog.txt
[2026-01-12 19:23:10] -rw-r--r--. 1 boincer umatlas        27 Jan 12 19:23 wrapper_checkpoint.txt
[2026-01-12 19:23:10] -rw-r--r--. 1 boincer umatlas      8192 Jan 12 19:23 boinc_mmap_file
[2026-01-12 19:23:10] -rw-------. 1 boincer umatlas   2465806 Jan 12 19:23 log.47962010._003379.job.log.1
[2026-01-12 19:23:10] -rw-------. 1 boincer umatlas       353 Jan 12 19:23 output.list
[2026-01-12 19:23:10] -rw-r--r--. 1 boincer umatlas       620 Jan 12 19:23 runtime_log
[2026-01-12 19:23:10] -rw-------. 1 boincer umatlas   3870720 Jan 12 19:23 result.tar.gz
[2026-01-12 19:23:10] -rw-------. 1 boincer umatlas       654 Jan 12 19:23 TihNDmKHbz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmumnKDmhSVMnm.diag
[2026-01-12 19:23:10] -rw-r--r--. 1 boincer umatlas      9338 Jan 12 19:23 runtime_log.err
[2026-01-12 19:23:10] -rw-r--r--. 1 boincer umatlas     14844 Jan 12 19:23 stderr.txt
[2026-01-12 19:23:10] HITS file was successfully produced:
[2026-01-12 19:23:10] -rw-------. 1 boincer umatlas 44278818 Jan 12 19:20 shared/HITS.pool.root.1
[2026-01-12 19:23:10]  *** Contents of shared directory: ***
[2026-01-12 19:23:10] total 432388
[2026-01-12 19:23:10] -rw-r--r--. 2 boincer umatlas 393999209 Jan 12 13:39 ATLAS.root_0
[2026-01-12 19:23:10] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 13:39 start_atlas.sh
[2026-01-12 19:23:10] -rw-r--r--. 2 boincer umatlas    592617 Jan 12 13:39 input.tar.gz
[2026-01-12 19:23:10] -rw-------. 1 boincer umatlas  44278818 Jan 12 19:20 HITS.pool.root.1
[2026-01-12 19:23:10] -rw-------. 1 boincer umatlas   3870720 Jan 12 19:23 result.tar.gz
19:23:11 (1159620): run_atlas exited; CPU time 19658.935138
19:23:11 (1159620): called boinc_finish(0)

</stderr_txt>
]]>

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