Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:02:56 (90484): wrapper (7.7.26015): starting
20:02:56 (90484): wrapper: running run_atlas (--nthreads 3)
[2026-01-12 20:02:56] Arguments: --nthreads 3
[2026-01-12 20:02:56] Threads: 3
[2026-01-12 20:02:56] Checking for CVMFS
[2026-01-12 20:02:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 20:02:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 20:02:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 20:02:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 20:02:56] 2.9.2.0 68256 39 51324 155062 0 90 17073170 36864000 0 130560 0 76285 99.977 2915 2923 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-12 20:02:56] CVMFS is ok
[2026-01-12 20:02:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 20:02:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 20:02:56] Further information can be found at the LHC@home message board.
[2026-01-12 20:02:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 20:02:56] Checking for apptainer binary...
[2026-01-12 20:02:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 20:02:56] Running /usr/bin/apptainer --version
[2026-01-12 20:02:56] apptainer version 1.4.1-1.1
[2026-01-12 20:02:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 20:02:56] thA352a
[2026-01-12 20:02:56] apptainer works
[2026-01-12 20:02:56] Set ATHENA_PROC_NUMBER=3
[2026-01-12 20:02:56] Set ATHENA_CORE_NUMBER=3
[2026-01-12 20:02:56] Starting ATLAS job with PandaID=6967368406
[2026-01-12 20:02:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 20:37:11]  *** The last 200 lines of the pilot log: ***
[2026-01-12 20:37:11]  is_tar=False
[2026-01-12 20:37:11]  lfn=log.47962010._003372.job.log.tgz.1
[2026-01-12 20:37:11]  mtime=0
[2026-01-12 20:37:11]  protocol_id=None
[2026-01-12 20:37:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-12 20:37:11]  replicas=None
[2026-01-12 20:37:11]  scope=mc16_13TeV
[2026-01-12 20:37:11]  status=None
[2026-01-12 20:37:11]  status_code=0
[2026-01-12 20:37:11]  storage_token=
[2026-01-12 20:37:11]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6967368406/log.47962010._003372.job.log.tgz.1
[2026-01-12 20:37:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/72/35/log.47962010._003372.job.log.tgz.1
[2026-01-12 20:37:11]  workdir=None
[2026-01-12 20:37:11] ]
[2026-01-12 20:37:11] 2026-01-12 19:36:33,440 | INFO     | transferring file log.47962010._003372.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6967368406/log.47962010._003372.job.log.tgz.1 to /local/data/boinc/
[2026-01-12 20:37:11] 2026-01-12 19:36:33,440 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6967368406/log.47962010._003372.job.log.tgz.1 /local/data/boinc/slots/0/log.47962010._0033
[2026-01-12 20:37:11] 2026-01-12 19:36:33,451 | INFO     | adding to output.list: log.47962010._003372.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/72/35/log.47962010._003372.job.log.tgz.
[2026-01-12 20:37:11] 2026-01-12 19:36:33,452 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-12 20:37:11] 2026-01-12 19:36:33,452 | INFO     | summary of transferred files:
[2026-01-12 20:37:11] 2026-01-12 19:36:33,452 | INFO     |  -- lfn=log.47962010._003372.job.log.tgz.1, status_code=0, status=transferred
[2026-01-12 20:37:11] 2026-01-12 19:36:33,452 | INFO     | stage-out finished correctly
[2026-01-12 20:37:11] 2026-01-12 19:36:33,481 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-12 20:37:11] 2026-01-12 19:36:33,978 | INFO     | PID=94205 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-12 20:37:11] 2026-01-12 19:36:34,978 | INFO     | time since job start (2012s) is within the limit (349056.0s)
[2026-01-12 20:37:11] 2026-01-12 19:36:35,221 | INFO     | job 6967368406 has state=finished
[2026-01-12 20:37:11] 2026-01-12 19:36:35,221 | INFO     | preparing for final server update for job 6967368406 in state='finished'
[2026-01-12 20:37:11] 2026-01-12 19:36:35,222 | INFO     | this job has now completed (state=finished)
[2026-01-12 20:37:11] 2026-01-12 19:36:35,222 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-12 20:37:11] 2026-01-12 19:36:35,222 | INFO     | log transfer has been attempted: DONE
[2026-01-12 20:37:11] 2026-01-12 19:36:35,222 | INFO     | job 6967368406 has finished - writing final server update
[2026-01-12 20:37:11] 2026-01-12 19:36:35,222 | INFO     | total number of processed events: 50 (read)
[2026-01-12 20:37:11] 2026-01-12 19:36:35,222 | INFO     | executing command: lscpu
[2026-01-12 20:37:11] 2026-01-12 19:36:35,237 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-12 20:37:11] 2026-01-12 19:36:36,753 | WARNING  | process 100643 can no longer be monitored (due to stat problems) - aborting
[2026-01-12 20:37:11] 2026-01-12 19:36:36,753 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6967368406/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 20:37:11] 2026-01-12 19:36:36,804 | INFO     | number of running child processes to parent process 100643: 1
[2026-01-12 20:37:11] 2026-01-12 19:36:36,804 | INFO     | maximum number of monitored processes: 8
[2026-01-12 20:37:11] 2026-01-12 19:36:36,984 | INFO     | time since job start (2014s) is within the limit (349056.0s)
[2026-01-12 20:37:11] 2026-01-12 19:36:37,486 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 20:37:11] 2026-01-12 19:36:37,487 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3543.2334166666665
[2026-01-12 20:37:11] 2026-01-12 19:36:37,488 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6967368406/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 20:37:11] 2026-01-12 19:36:37,488 | INFO     | extracted standard info from prmon json
[2026-01-12 20:37:11] 2026-01-12 19:36:37,488 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 20:37:11] 2026-01-12 19:36:37,488 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 20:37:11] 2026-01-12 19:36:37,489 | INFO     | fitting pss+swap vs Time
[2026-01-12 20:37:11] 2026-01-12 19:36:37,489 | INFO     | sum of square deviations: 5441962.5
[2026-01-12 20:37:11] 2026-01-12 19:36:37,489 | INFO     | sum of deviations: 861579524.5
[2026-01-12 20:37:11] 2026-01-12 19:36:37,489 | INFO     | mean x: 1768245669.5
[2026-01-12 20:37:11] 2026-01-12 19:36:37,489 | INFO     | mean y: 2030017.7307692308
[2026-01-12 20:37:11] 2026-01-12 19:36:37,489 | INFO     | intersect: -279949230786.987
[2026-01-12 20:37:11] 2026-01-12 19:36:37,489 | INFO     | chi2: 0.1564807629266893
[2026-01-12 20:37:11] 2026-01-12 19:36:37,489 | INFO     | current memory leak: 158.32 B/s (using 26 data points, chi2=0.16)
[2026-01-12 20:37:11] 2026-01-12 19:36:37,489 | INFO     | could have reported an average CPU frequency of 3811 MHz (5 samples)
[2026-01-12 20:37:11] 2026-01-12 19:36:37,489 | INFO     | ..............................
[2026-01-12 20:37:11] 2026-01-12 19:36:37,489 | INFO     | . Timing measurements:
[2026-01-12 20:37:11] 2026-01-12 19:36:37,489 | INFO     | . get job = 0 s
[2026-01-12 20:37:11] 2026-01-12 19:36:37,489 | INFO     | . initial setup = 1 s
[2026-01-12 20:37:11] 2026-01-12 19:36:37,490 | INFO     | . payload setup = 2 s
[2026-01-12 20:37:11] 2026-01-12 19:36:37,490 | INFO     | . stage-in = 0 s
[2026-01-12 20:37:11] 2026-01-12 19:36:37,490 | INFO     | . payload execution = 1990 s
[2026-01-12 20:37:11] 2026-01-12 19:36:37,490 | INFO     | . stage-out = 0 s
[2026-01-12 20:37:11] 2026-01-12 19:36:37,490 | INFO     | . log creation = 0 s
[2026-01-12 20:37:11] 2026-01-12 19:36:37,490 | INFO     | ..............................
[2026-01-12 20:37:11] 2026-01-12 19:36:37,631 | INFO     | 
[2026-01-12 20:37:11] 2026-01-12 19:36:37,631 | INFO     | job summary report
[2026-01-12 20:37:11] 2026-01-12 19:36:37,631 | INFO     | --------------------------------------------------
[2026-01-12 20:37:11] 2026-01-12 19:36:37,631 | INFO     | PanDA job id: 6967368406
[2026-01-12 20:37:11] 2026-01-12 19:36:37,631 | INFO     | task id: 47962010
[2026-01-12 20:37:11] 2026-01-12 19:36:37,632 | INFO     | errors: (none)
[2026-01-12 20:37:11] 2026-01-12 19:36:37,632 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 20:37:11] 2026-01-12 19:36:37,632 | INFO     | pilot state: finished 
[2026-01-12 20:37:11] 2026-01-12 19:36:37,632 | INFO     | transexitcode: 0
[2026-01-12 20:37:11] 2026-01-12 19:36:37,632 | INFO     | exeerrorcode: 0
[2026-01-12 20:37:11] 2026-01-12 19:36:37,632 | INFO     | exeerrordiag: 
[2026-01-12 20:37:11] 2026-01-12 19:36:37,632 | INFO     | exitcode: 0
[2026-01-12 20:37:11] 2026-01-12 19:36:37,632 | INFO     | exitmsg: OK
[2026-01-12 20:37:11] 2026-01-12 19:36:37,632 | INFO     | cpuconsumptiontime: 4659 s
[2026-01-12 20:37:11] 2026-01-12 19:36:37,632 | INFO     | nevents: 50
[2026-01-12 20:37:11] 2026-01-12 19:36:37,632 | INFO     | neventsw: 0
[2026-01-12 20:37:11] 2026-01-12 19:36:37,632 | INFO     | pid: 100643
[2026-01-12 20:37:11] 2026-01-12 19:36:37,632 | INFO     | pgrp: 100643
[2026-01-12 20:37:11] 2026-01-12 19:36:37,632 | INFO     | corecount: 3
[2026-01-12 20:37:11] 2026-01-12 19:36:37,632 | INFO     | event service: False
[2026-01-12 20:37:11] 2026-01-12 19:36:37,632 | INFO     | sizes: {0: 2284571, 2: 2284833, 11: 2284861, 1997: 2310736, 1998: 2319792, 2002: 2320014}
[2026-01-12 20:37:11] 2026-01-12 19:36:37,632 | INFO     | --------------------------------------------------
[2026-01-12 20:37:11] 2026-01-12 19:36:37,632 | INFO     | 
[2026-01-12 20:37:11] 2026-01-12 19:36:37,632 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-12 20:37:11] 2026-01-12 19:36:37,647 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 20:37:11] 2026-01-12 19:36:37,647 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 20:37:11] 2026-01-12 19:36:37,647 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 20:37:11] 2026-01-12 19:36:37,647 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 20:37:11] 2026-01-12 19:36:37,647 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 20:37:11] 2026-01-12 19:36:37,647 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 20:37:11] 2026-01-12 19:36:37,647 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 20:37:11] 2026-01-12 19:36:37,647 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 20:37:11] 2026-01-12 19:36:37,647 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 20:37:11] 2026-01-12 19:36:37,647 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 20:37:11] 2026-01-12 19:36:37,647 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 20:37:11] 2026-01-12 19:36:37,647 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 20:37:11] 2026-01-12 19:36:37,647 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 20:37:11] 2026-01-12 19:36:37,647 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 20:37:11] 2026-01-12 19:36:37,647 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 20:37:11] 2026-01-12 19:36:37,647 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 20:37:11] 2026-01-12 19:36:37,647 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 20:37:11] 2026-01-12 19:36:37,647 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 20:37:11] 2026-01-12 19:36:37,647 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 20:37:11] 2026-01-12 19:36:37,647 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 20:37:11] 2026-01-12 19:36:37,648 | INFO     | job 6967368406 has completed (purged errors)
[2026-01-12 20:37:11] 2026-01-12 19:36:37,648 | INFO     | overall cleanup function is called
[2026-01-12 20:37:11] 2026-01-12 19:36:38,656 | INFO     | --- collectZombieJob: --- 10, [100643]
[2026-01-12 20:37:11] 2026-01-12 19:36:38,656 | INFO     | zombie collector waiting for pid 100643
[2026-01-12 20:37:11] 2026-01-12 19:36:38,656 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 20:37:11] 2026-01-12 19:36:38,656 | INFO     | collected zombie processes
[2026-01-12 20:37:11] 2026-01-12 19:36:38,656 | INFO     | will attempt to kill all subprocesses of pid=100643
[2026-01-12 20:37:11] 2026-01-12 19:36:38,699 | INFO     | process IDs to be killed: [100643] (in reverse order)
[2026-01-12 20:37:11] 2026-01-12 19:36:38,722 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 20:37:11] 2026-01-12 19:36:38,723 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 20:37:11] 2026-01-12 19:36:38,724 | INFO     | did not find any defunct processes belonging to 100643
[2026-01-12 20:37:11] 2026-01-12 19:36:38,725 | INFO     | did not find any defunct processes belonging to 100643
[2026-01-12 20:37:11] 2026-01-12 19:36:38,725 | INFO     | ready for new job
[2026-01-12 20:37:11] 2026-01-12 19:36:38,725 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 20:37:11] 2026-01-12 19:36:38,726 | INFO     | ***************************************
[2026-01-12 20:37:11] 2026-01-12 19:36:38,726 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 20:37:11] 2026-01-12 19:36:38,726 | INFO     | ***************************************
[2026-01-12 20:37:11] 2026-01-12 19:36:38,726 | INFO     | 
[2026-01-12 20:37:11] 2026-01-12 19:36:38,726 | INFO     | architecture information:
[2026-01-12 20:37:11] 2026-01-12 19:36:38,726 | INFO     | executing command: cat /etc/os-release
[2026-01-12 20:37:11] 2026-01-12 19:36:38,735 | INFO     | cat /etc/os-release:
[2026-01-12 20:37:11] NAME="CentOS Linux"
[2026-01-12 20:37:11] VERSION="7 (Core)"
[2026-01-12 20:37:11] ID="centos"
[2026-01-12 20:37:11] ID_LIKE="rhel fedora"
[2026-01-12 20:37:11] VERSION_ID="7"
[2026-01-12 20:37:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 20:37:11] ANSI_COLOR="0;31"
[2026-01-12 20:37:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 20:37:11] HOME_URL="https://www.centos.org/"
[2026-01-12 20:37:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 20:37:11] 
[2026-01-12 20:37:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 20:37:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 20:37:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 20:37:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 20:37:11] 
[2026-01-12 20:37:11] 2026-01-12 19:36:38,735 | INFO     | ***************************************
[2026-01-12 20:37:11] 2026-01-12 19:36:39,238 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-12 20:37:11] 2026-01-12 19:36:39,250 | INFO     | sufficient remaining disk space (243917651968 B)
[2026-01-12 20:37:11] 2026-01-12 19:36:39,250 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 20:37:11] 2026-01-12 19:36:39,250 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 20:37:11] 2026-01-12 19:36:39,250 | INFO     | update_server=False
[2026-01-12 20:37:11] 2026-01-12 19:36:39,250 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 20:37:11] 2026-01-12 19:36:39,250 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 20:37:11] 2026-01-12 19:36:39,250 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 20:37:11] 2026-01-12 19:36:39,308 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-12 20:37:11] 2026-01-12 19:36:39,308 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-12 20:37:11] 2026-01-12 19:36:39,308 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 20:37:11] 2026-01-12 19:36:39,308 | INFO     | will abort loop
[2026-01-12 20:37:11] 2026-01-12 19:36:39,513 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 20:37:11] 2026-01-12 19:36:40,067 | INFO     | all job control threads have been joined
[2026-01-12 20:37:11] 2026-01-12 19:36:40,162 | INFO     | all data control threads have been joined
[2026-01-12 20:37:11] 2026-01-12 19:36:40,167 | INFO     | all payload control threads have been joined
[2026-01-12 20:37:11] 2026-01-12 19:36:40,256 | INFO     | [job] retrieve thread has finished
[2026-01-12 20:37:11] 2026-01-12 19:36:40,256 | INFO     | [job] queue monitor thread has finished
[2026-01-12 20:37:11] 2026-01-12 19:36:40,309 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 20:37:11] 2026-01-12 19:36:40,313 | INFO     | [job] job monitor thread has finished
[2026-01-12 20:37:11] 2026-01-12 19:36:40,798 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 20:37:11] 2026-01-12 19:36:41,072 | INFO     | [job] control thread has finished
[2026-01-12 20:37:11] 2026-01-12 19:36:41,126 | INFO     | [data] copytool_in thread has finished
[2026-01-12 20:37:11] 2026-01-12 19:36:41,167 | INFO     | [data] control thread has finished
[2026-01-12 20:37:11] 2026-01-12 19:36:41,172 | INFO     | [payload] control thread has finished
[2026-01-12 20:37:11] 2026-01-12 19:36:41,255 | INFO     | [data] copytool_out thread has finished
[2026-01-12 20:37:11] 2026-01-12 19:36:41,327 | INFO     | [payload] validate_post thread has finished
[2026-01-12 20:37:11] 2026-01-12 19:36:41,427 | INFO     | [payload] failed_post thread has finished
[2026-01-12 20:37:11] 2026-01-12 19:36:41,654 | INFO     | [job] validate thread has finished
[2026-01-12 20:37:11] 2026-01-12 19:36:41,727 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 20:37:11] 2026-01-12 19:36:43,520 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 20:37:11] 2026-01-12 19:36:49,601 | INFO     | job.realtimelogging is not enabled
[2026-01-12 20:37:11] 2026-01-12 19:36:50,607 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 20:37:11] 2026-01-12 19:37:04,393 | INFO     | [monitor] cgroup control has ended
[2026-01-12 20:37:11] 2026-01-12 19:37:06,197 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140002286356288)>', '<ExcThread(monitor, started 140001933240064)>']
[2026-01-12 20:37:11] 2026-01-12 19:37:10,095 | INFO     | PID=94205 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-12 20:37:11] 2026-01-12 19:37:10,096 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 20:37:11] 2026-01-12 19:37:10,096 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 20:37:11] 2026-01-12 19:37:10,096 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 20:37:11] 2026-01-12 19:37:10,096 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 20:37:11] 2026-01-12 19:37:10,096 | INFO     | [monitor] control thread has ended
[2026-01-12 20:37:11] 2026-01-12 19:37:11,223 | INFO     | all workflow threads have been joined
[2026-01-12 20:37:11] 2026-01-12 19:37:11,223 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 20:37:11] 2026-01-12 19:37:11,223 | INFO     | traces error code: 0
[2026-01-12 20:37:11] 2026-01-12 19:37:11,223 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 20:37:11] 2026-01-12 19:37:11,272 [wrapper] ==== pilot stdout END ====
[2026-01-12 20:37:11] 2026-01-12 19:37:11,275 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 20:37:11] 2026-01-12 19:37:11,277 [wrapper] pilotpid: 94205
[2026-01-12 20:37:11] 2026-01-12 19:37:11,279 [wrapper] Pilot exit status: 0
[2026-01-12 20:37:11] 2026-01-12 19:37:11,286 [wrapper] pandaids: 6967368406
[2026-01-12 20:37:11] 2026-01-12 19:37:11,302 [wrapper] cleanup supervisor_pilot  107654 94206
[2026-01-12 20:37:11] 2026-01-12 19:37:11,304 [wrapper] Test setup, not cleaning
[2026-01-12 20:37:11] 2026-01-12 19:37:11,307 [wrapper] apfmon messages muted
[2026-01-12 20:37:11] 2026-01-12 19:37:11,309 [wrapper] ==== wrapper stdout END ====
[2026-01-12 20:37:11] 2026-01-12 19:37:11,311 [wrapper] ==== wrapper stderr END ====
[2026-01-12 20:37:11]  *** Error codes and diagnostics ***
[2026-01-12 20:37:11]     "exeErrorCode": 0,
[2026-01-12 20:37:11]     "exeErrorDiag": "",
[2026-01-12 20:37:11]     "pilotErrorCode": 0,
[2026-01-12 20:37:11]     "pilotErrorDiag": "",
[2026-01-12 20:37:11]  *** Listing of results directory ***
[2026-01-12 20:37:11] total 429824
[2026-01-12 20:37:11] -rw-r--r-- 1 boinc boinc    579449 Jan 12 18:19 pilot3.tar.gz
[2026-01-12 20:37:11] -rw-r--r-- 1 boinc boinc      5112 Jan 12 18:49 queuedata.json
[2026-01-12 20:37:11] -rwx------ 1 boinc boinc     36322 Jan 12 18:53 runpilot2-wrapper.sh
[2026-01-12 20:37:11] -rw-r--r-- 1 boinc boinc       100 Jan 12 20:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 20:37:11] -rwxr-xr-x 1 boinc boinc      7986 Jan 12 20:02 run_atlas
[2026-01-12 20:37:11] -rw-r--r-- 1 boinc boinc       105 Jan 12 20:02 job.xml
[2026-01-12 20:37:11] -rw-r--r-- 2 boinc boinc 393999209 Jan 12 20:02 EVNT.47962006._000095.pool.root.1
[2026-01-12 20:37:11] -rw-r--r-- 2 boinc boinc    592616 Jan 12 20:02 input.tar.gz
[2026-01-12 20:37:11] -rw-r--r-- 2 boinc boinc     15847 Jan 12 20:02 start_atlas.sh
[2026-01-12 20:37:11] drwxrwx--x 2 boinc boinc      4096 Jan 12 20:02 shared
[2026-01-12 20:37:11] -rw-r--r-- 1 boinc boinc         0 Jan 12 20:02 boinc_setup_complete
[2026-01-12 20:37:11] -rw-r--r-- 1 boinc boinc      6439 Jan 12 20:02 init_data.xml
[2026-01-12 20:37:11] -rw-r--r-- 1 boinc boinc         0 Jan 12 20:02 boinc_lockfile
[2026-01-12 20:37:11] -rw-r--r-- 1 boinc boinc      2889 Jan 12 20:02 pandaJob.out
[2026-01-12 20:37:11] -rw------- 1 boinc boinc    988539 Jan 12 20:03 agis_schedconf.cvmfs.json
[2026-01-12 20:37:11] -rw------- 1 boinc boinc   1516240 Jan 12 20:03 agis_ddmendpoints.agis.ALL.json
[2026-01-12 20:37:11] drwx------ 5 boinc boinc      4096 Jan 12 20:03 pilot3
[2026-01-12 20:37:11] -rw-r--r-- 1 boinc boinc       528 Jan 12 20:34 boinc_task_state.xml
[2026-01-12 20:37:11] -rw------- 1 boinc boinc        95 Jan 12 20:36 pilot_heartbeat.json
[2026-01-12 20:37:11] -rw------- 1 boinc boinc  40313816 Jan 12 20:36 HITS.47962010._003372.pool.root.1
[2026-01-12 20:37:11] -rw------- 1 boinc boinc      1010 Jan 12 20:36 memory_monitor_summary.json
[2026-01-12 20:37:11] -rw------- 1 boinc boinc    621753 Jan 12 20:36 log.47962010._003372.job.log.tgz.1
[2026-01-12 20:37:11] -rw------- 1 boinc boinc      8519 Jan 12 20:36 heartbeat.json
[2026-01-12 20:37:11] -rw-r--r-- 1 boinc boinc      8192 Jan 12 20:36 boinc_mmap_file
[2026-01-12 20:37:11] -rw-r--r-- 1 boinc boinc        26 Jan 12 20:36 wrapper_checkpoint.txt
[2026-01-12 20:37:11] -rw------- 1 boinc boinc      5008 Jan 12 20:37 pilotlog.txt
[2026-01-12 20:37:11] -rw------- 1 boinc boinc    333355 Jan 12 20:37 log.47962010._003372.job.log.1
[2026-01-12 20:37:11] -rw------- 1 boinc boinc       353 Jan 12 20:37 output.list
[2026-01-12 20:37:11] -rw-r--r-- 1 boinc boinc       620 Jan 12 20:37 runtime_log
[2026-01-12 20:37:11] -rw------- 1 boinc boinc    972800 Jan 12 20:37 result.tar.gz
[2026-01-12 20:37:11] -rw-r--r-- 1 boinc boinc      8902 Jan 12 20:37 runtime_log.err
[2026-01-12 20:37:11] -rw------- 1 boinc boinc       658 Jan 12 20:37 k6zLDmEIbz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0mnKDmZOwFGo.diag
[2026-01-12 20:37:11] -rw-r--r-- 1 boinc boinc     21673 Jan 12 20:37 stderr.txt
[2026-01-12 20:37:11] HITS file was successfully produced:
[2026-01-12 20:37:11] -rw------- 1 boinc boinc 40313816 Jan 12 20:36 shared/HITS.pool.root.1
[2026-01-12 20:37:11]  *** Contents of shared directory: ***
[2026-01-12 20:37:11] total 425692
[2026-01-12 20:37:11] -rw-r--r-- 2 boinc boinc 393999209 Jan 12 20:02 ATLAS.root_0
[2026-01-12 20:37:11] -rw-r--r-- 2 boinc boinc    592616 Jan 12 20:02 input.tar.gz
[2026-01-12 20:37:11] -rw-r--r-- 2 boinc boinc     15847 Jan 12 20:02 start_atlas.sh
[2026-01-12 20:37:11] -rw------- 1 boinc boinc  40313816 Jan 12 20:36 HITS.pool.root.1
[2026-01-12 20:37:11] -rw------- 1 boinc boinc    972800 Jan 12 20:37 result.tar.gz
20:37:13 (90484): run_atlas exited; CPU time 4651.824820
20:37:13 (90484): called boinc_finish(0)

</stderr_txt>
]]>

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