Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-12 23:56:00 (3468): vboxwrapper version 26210
2026-01-12 23:56:00 (3468): BOINC client version: 7.16.11
2026-01-12 23:56:01 (3468): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2026-01-12 23:56:01 (3468): Successfully copied 'init_data.xml' to the shared directory.
2026-01-12 23:56:01 (3468): Create VM. (boinc_65aa3626a0d7e7f4, slot#3)
2026-01-12 23:56:01 (3468): Setting Memory Size for VM. (4400MB)
2026-01-12 23:56:01 (3468): Setting CPU Count for VM. (4)
2026-01-12 23:56:02 (3468): Setting Chipset Options for VM.
2026-01-12 23:56:02 (3468): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-12 23:56:02 (3468): Setting Boot Options for VM.
2026-01-12 23:56:02 (3468): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-12 23:56:03 (3468): Enabling VM Network Access.
2026-01-12 23:56:03 (3468): Disabling USB Support for VM.
2026-01-12 23:56:03 (3468): Disabling COM Port Support for VM.
2026-01-12 23:56:03 (3468): Disabling LPT Port Support for VM.
2026-01-12 23:56:03 (3468): Disabling Audio Support for VM.
2026-01-12 23:56:04 (3468): Disabling Clipboard Support for VM.
2026-01-12 23:56:04 (3468): Disabling Drag and Drop Support for VM.
2026-01-12 23:56:04 (3468): Adding storage controller(s) to VM.
2026-01-12 23:56:05 (3468): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-12 23:56:06 (3468): Adding VirtualBox Guest Additions to VM.
2026-01-12 23:56:06 (3468): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-12 23:56:06 (3468): forwarding host port 62161 to guest port 80
2026-01-12 23:56:06 (3468): Enabling remote desktop for VM.
2026-01-12 23:56:07 (3468): Required extension pack not installed, remote desktop not enabled.
2026-01-12 23:56:07 (3468): Enabling shared directory for VM.
2026-01-12 23:56:07 (3468): Starting VM using VBoxManage interface. (boinc_65aa3626a0d7e7f4, slot#3)
2026-01-12 23:56:11 (3468): Successfully started VM. (PID = '31520')
2026-01-12 23:56:11 (3468): Reporting VM Process ID to BOINC.
2026-01-12 23:56:11 (3468): Guest Log: BIOS: VirtualBox 6.1.12
2026-01-12 23:56:11 (3468): Guest Log: CPUID EDX: 0x178bfbff
2026-01-12 23:56:11 (3468): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-12 23:56:11 (3468): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-12 23:56:11 (3468): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-12 23:56:11 (3468): Detected: Web Application Enabled (http://localhost:62161)
2026-01-12 23:56:11 (3468): Preference change detected
2026-01-12 23:56:11 (3468): Setting CPU throttle for VM. (100%)
2026-01-12 23:56:11 (3468): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-12 23:56:13 (3468): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-12 23:56:13 (3468): Guest Log: BIOS: Booting from Hard Disk...
2026-01-12 23:56:16 (3468): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-12 23:56:16 (3468): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-12 23:56:16 (3468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-12 23:56:26 (3468): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-12 23:56:26 (3468): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-01-12 23:56:35 (3468): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-12 23:56:35 (3468): Guest Log: 00:00:00.000144 main     Log opened 2026-01-12T23:56:33.195590000Z
2026-01-12 23:56:35 (3468): Guest Log: 00:00:00.000233 main     OS Product: Linux
2026-01-12 23:56:35 (3468): Guest Log: 00:00:00.000266 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-12 23:56:35 (3468): Guest Log: 00:00:00.000294 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-12 23:56:35 (3468): Guest Log: 00:00:00.000321 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-12 23:56:35 (3468): Guest Log: 00:00:00.000322 main     Process ID: 1302
2026-01-12 23:56:35 (3468): Guest Log: 00:00:00.000322 main     Package type: LINUX_64BITS_GENERIC
2026-01-12 23:56:35 (3468): Guest Log: 00:00:00.002014 main     5.2.32 r132073 started. Verbose level = 0
2026-01-12 23:56:35 (3468): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-12 23:56:35 (3468): Guest Log: [INFO] Mounting shared directory
2026-01-12 23:56:35 (3468): Guest Log: [INFO] Checking for init_data.xml
2026-01-12 23:56:41 (3468): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-12 23:56:41 (3468): Guest Log: [INFO] Detected branch: prod
2026-01-12 23:56:41 (3468): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-12 23:56:41 (3468): Guest Log: Copying input files
2026-01-12 23:56:44 (3468): Guest Log: Copied input files into RunAtlas.
2026-01-12 23:56:44 (3468): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-12 23:56:44 (3468): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-12 23:56:44 (3468): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-12 23:56:44 (3468): Guest Log: Further information can be found at the LHC@home message board.
2026-01-12 23:56:45 (3468): Guest Log: 00:00:10.005734 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 595 521 000ns (GuestNow=1 768 287 404 795 317 000 ns GuestLast=1 768 262 193 199 796 000 ns fSetTimeLastLoop=true )
2026-01-12 23:56:56 (3468): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-12 23:56:56 (3468): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-12 23:56:56 (3468): Guest Log: 2.6.3.0 1581 0 32180 155079 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-12 23:56:57 (3468): Guest Log: copied the webapp to /var/www
2026-01-12 23:56:57 (3468): Guest Log: ATHENA_PROC_NUMBER=4
2026-01-12 23:56:57 (3468): Guest Log: ATHENA_CORE_NUMBER=4
2026-01-12 23:56:57 (3468): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-12 23:56:57 (3468): Guest Log:  *** Starting ATLAS job. (PandaID=6967339967 taskID=47962010) ***
2026-01-13 01:46:13 (3468): Status Report: Elapsed Time: '6000.881332'
2026-01-13 01:46:13 (3468): Status Report: CPU Time: '17324.359375'
2026-01-13 01:47:45 (3468): Guest Log:  *** Job finished ***
2026-01-13 01:47:45 (3468): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-13 01:47:45 (3468): Guest Log: 2026-01-13 08:46:56,389 | INFO     | [data] copytool_out thread has finished
2026-01-13 01:47:45 (3468): Guest Log: 2026-01-13 08:46:59,151 | INFO     | [data] queue_monitor thread has finished
2026-01-13 01:47:45 (3468): Guest Log: 2026-01-13 08:47:37,988 | INFO     | [monitor] cgroup control has ended
2026-01-13 01:47:45 (3468): Guest Log: 2026-01-13 08:47:38,629 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139766316341056)>', '<ExcThread(monitor, started 139765617784576)>']
2026-01-13 01:47:45 (3468): Guest Log: 2026-01-13 08:47:38,945 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-13 01:47:45 (3468): Guest Log: 2026-01-13 08:47:38,945 | INFO     | [monitor] control thread has ended
2026-01-13 01:47:45 (3468): Guest Log: 2026-01-13 08:47:43,634 | INFO     | all workflow threads have been joined
2026-01-13 01:47:45 (3468): Guest Log: 2026-01-13 08:47:43,635 | INFO     | end of generic workflow (traces error code: 0)
2026-01-13 01:47:45 (3468): Guest Log: 2026-01-13 08:47:43,635 | INFO     | traces error code: 0
2026-01-13 01:47:45 (3468): Guest Log: 2026-01-13 08:47:43,635 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-13 01:47:45 (3468): Guest Log: 2026-01-13 08:47:43,725 [wrapper] ==== pilot stdout END ====
2026-01-13 01:47:45 (3468): Guest Log: 2026-01-13 08:47:43,731 [wrapper] ==== wrapper stdout RESUME ====
2026-01-13 01:47:45 (3468): Guest Log: 2026-01-13 08:47:43,737 [wrapper] pilotpid: 6008
2026-01-13 01:47:45 (3468): Guest Log: 2026-01-13 08:47:43,743 [wrapper] Pilot exit status: 0
2026-01-13 01:47:45 (3468): Guest Log: 2026-01-13 08:47:43,764 [wrapper] pandaids: 6967339967
2026-01-13 01:47:45 (3468): Guest Log: 2026-01-13 08:47:44,324 [wrapper] cleanup supervisor_pilot  5500 6009
2026-01-13 01:47:45 (3468): Guest Log: 2026-01-13 08:47:44,341 [wrapper] Test setup, not cleaning
2026-01-13 01:47:45 (3468): Guest Log: 2026-01-13 08:47:44,348 [wrapper] apfmon messages muted
2026-01-13 01:47:45 (3468): Guest Log: 2026-01-13 08:47:44,355 [wrapper] ==== wrapper stdout END ====
2026-01-13 01:47:45 (3468): Guest Log: 2026-01-13 08:47:44,361 [wrapper] ==== wrapper stderr END ====
2026-01-13 01:47:45 (3468): Guest Log:  *** Error codes and diagnostics ***
2026-01-13 01:47:45 (3468): Guest Log:     "exeErrorCode": 0,
2026-01-13 01:47:45 (3468): Guest Log:     "exeErrorDiag": "",
2026-01-13 01:47:45 (3468): Guest Log:     "pilotErrorCode": 0,
2026-01-13 01:47:45 (3468): Guest Log:     "pilotErrorDiag": "",
2026-01-13 01:47:45 (3468): Guest Log:  *** Listing of results directory ***
2026-01-13 01:47:45 (3468): Guest Log: total 48204
2026-01-13 01:47:45 (3468): Guest Log: -rw-r--r--. 1 atlas atlas     5112 Jan 12 17:19 queuedata.json
2026-01-13 01:47:45 (3468): Guest Log: -rw-r--r--. 1 atlas atlas   579449 Jan 12 17:19 pilot3.tar.gz
2026-01-13 01:47:45 (3468): Guest Log: -rwx------. 1 atlas atlas    36322 Jan 12 17:23 runpilot2-wrapper.sh
2026-01-13 01:47:45 (3468): Guest Log: -rwxr-xr-x. 1 atlas atlas    12101 Jan 13 06:56 init_data.xml
2026-01-13 01:47:45 (3468): Guest Log: -rwxr-xr-x. 1 atlas atlas   592617 Jan 13 06:56 input.tar.gz
2026-01-13 01:47:45 (3468): Guest Log: -rwxr-xr-x. 1 atlas atlas    15847 Jan 13 06:56 start_atlas.sh
2026-01-13 01:47:45 (3468): Guest Log: lrwxrwxrwx. 1 atlas atlas       20 Jan 13 06:56 EVNT.47962006._000109.pool.root.1 -> /data/./ATLAS.root_0
2026-01-13 01:47:45 (3468): Guest Log: -rw-r--r--. 1 atlas atlas     2890 Jan 13 06:56 pandaJob.out
2026-01-13 01:47:45 (3468): Guest Log: -rw-------. 1 atlas atlas   993374 Jan 13 06:59 agis_schedconf.cvmfs.json
2026-01-13 01:47:45 (3468): Guest Log: -rw-------. 1 atlas atlas  1516240 Jan 13 06:59 agis_ddmendpoints.agis.ALL.json
2026-01-13 01:47:45 (3468): Guest Log: drwx------. 5 atlas atlas     4096 Jan 13 06:59 pilot3
2026-01-13 01:47:45 (3468): Guest Log: -rw-------. 1 atlas atlas       95 Jan 13 08:46 pilot_heartbeat.json
2026-01-13 01:47:45 (3468): Guest Log: -rw-------. 1 atlas atlas 42068378 Jan 13 08:46 HITS.47962010._003268.pool.root.1
2026-01-13 01:47:45 (3468): Guest Log: -rw-------. 1 atlas atlas     1029 Jan 13 08:46 memory_monitor_summary.json
2026-01-13 01:47:45 (3468): Guest Log: -rw-------. 1 atlas atlas   807411 Jan 13 08:46 log.47962010._003268.job.log.tgz.1
2026-01-13 01:47:45 (3468): Guest Log: -rw-------. 1 atlas atlas     8605 Jan 13 08:46 heartbeat.json
2026-01-13 01:47:45 (3468): Guest Log: -rw-------. 1 atlas atlas     4612 Jan 13 08:47 pilotlog.txt
2026-01-13 01:47:45 (3468): Guest Log: -rw-------. 1 atlas atlas   913032 Jan 13 08:47 log.47962010._003268.job.log.1
2026-01-13 01:47:45 (3468): Guest Log: -rw-------. 1 atlas atlas      353 Jan 13 08:47 output.list
2026-01-13 01:47:45 (3468): Guest Log: -rw-r--r--. 1 atlas atlas      620 Jan 13 08:47 runtime_log
2026-01-13 01:47:45 (3468): Guest Log: -rw-------. 1 atlas atlas  1740800 Jan 13 08:47 result.tar.gz
2026-01-13 01:47:45 (3468): Guest Log: -rw-r--r--. 1 atlas atlas     8788 Jan 13 08:47 runtime_log.err
2026-01-13 01:47:45 (3468): Guest Log: -rw-------. 1 atlas atlas      668 Jan 13 08:47 qWwNDmLoaz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmllnKDm6RVQJo.diag
2026-01-13 01:47:45 (3468): Guest Log: Looking for outputfile HITS.47962010._003268.pool.root.1
2026-01-13 01:47:45 (3468): Guest Log: HITS file was successfully produced
2026-01-13 01:47:45 (3468): Guest Log: -rw-------. 1 atlas atlas 42068378 Jan 13 08:46 /home/atlas/RunAtlas/HITS.47962010._003268.pool.root.1
2026-01-13 01:47:46 (3468): Guest Log: Successfully finished the ATLAS job!
2026-01-13 01:47:46 (3468): Guest Log: Copying the results back to the shared directory!
2026-01-13 01:47:46 (3468): Guest Log:  *** Contents of shared directory: ***
2026-01-13 01:47:46 (3468): Guest Log: total 427944
2026-01-13 01:47:46 (3468): Guest Log: -rwxrwxrwx. 1 root root 393778295 Jan 13 06:56 ATLAS.root_0
2026-01-13 01:47:46 (3468): Guest Log: -rwxrwxrwx. 1 root root  42068378 Jan 13 08:47 HITS.pool.root.1
2026-01-13 01:47:46 (3468): Guest Log: -rwxrwxrwx. 1 root root     12101 Jan 13 06:56 init_data.xml
2026-01-13 01:47:46 (3468): Guest Log: -rwxrwxrwx. 1 root root    592617 Jan 12 18:09 input.tar.gz
2026-01-13 01:47:46 (3468): Guest Log: -rwxrwxrwx. 1 root root   1740800 Jan 13 08:47 result.tar.gz
2026-01-13 01:47:46 (3468): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan 12 18:09 start_atlas.sh
2026-01-13 01:47:46 (3468): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-13 01:47:46 (3468): VM Completion File Detected.
2026-01-13 01:47:46 (3468): Powering off VM.
2026-01-13 01:47:47 (3468): Successfully stopped VM.
2026-01-13 01:47:47 (3468): Deregistering VM. (boinc_65aa3626a0d7e7f4, slot#3)
2026-01-13 01:47:47 (3468): Removing network bandwidth throttle group from VM.
2026-01-13 01:47:47 (3468): Removing VM from VirtualBox.
2026-01-13 01:47:53 (3468): called boinc_finish(0)

</stderr_txt>
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