Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:10:24 (10415): wrapper (7.7.26015): starting
13:10:24 (10415): wrapper: running run_atlas (--nthreads 12)
[2026-01-12 13:10:24] Arguments: --nthreads 12
[2026-01-12 13:10:24] Threads: 12
[2026-01-12 13:10:24] Checking for CVMFS
[2026-01-12 13:10:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 13:10:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 13:10:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 13:10:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 13:10:25] 2.11.2.0 3081 355657 96832 155061 1 69 12405769 20275201 1 130560 1 149606102 99.951 20839807 16418 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 13:10:25] CVMFS is ok
[2026-01-12 13:10:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 13:10:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 13:10:25] Further information can be found at the LHC@home message board.
[2026-01-12 13:10:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 13:10:25] Checking for apptainer binary...
[2026-01-12 13:10:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 13:10:25] Running /usr/bin/apptainer --version
[2026-01-12 13:10:25] apptainer version 1.3.2-1.el7
[2026-01-12 13:10:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 13:10:26] c-205-29.aglt2.org
[2026-01-12 13:10:26] apptainer works
[2026-01-12 13:10:26] Set ATHENA_PROC_NUMBER=12
[2026-01-12 13:10:26] Set ATHENA_CORE_NUMBER=12
[2026-01-12 13:10:26] Starting ATLAS job with PandaID=6967339966
[2026-01-12 13:10:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 13:47:50]  *** The last 200 lines of the pilot log: ***
[2026-01-12 13:47:50]  replicas=None
[2026-01-12 13:47:50]  scope=mc16_13TeV
[2026-01-12 13:47:50]  status=None
[2026-01-12 13:47:50]  status_code=0
[2026-01-12 13:47:50]  storage_token=
[2026-01-12 13:47:50]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6967339966/log.47962010._003267.job.log.tgz.1
[2026-01-12 13:47:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/77/38/log.47962010._003267.job.log.tgz.1
[2026-01-12 13:47:50]  workdir=None
[2026-01-12 13:47:50] ]
[2026-01-12 13:47:50] 2026-01-12 18:46:40,554 | INFO     | transferring file log.47962010._003267.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6967339966/log.47962010._003267.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-12 13:47:50] 2026-01-12 18:46:40,555 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6967339966/log.47962010._003267.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._003267.job
[2026-01-12 13:47:50] 2026-01-12 18:46:40,577 | INFO     | adding to output.list: log.47962010._003267.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/77/38/log.47962010._003267.job.log.tgz.
[2026-01-12 13:47:50] 2026-01-12 18:46:40,578 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-12 13:47:50] 2026-01-12 18:46:40,578 | INFO     | summary of transferred files:
[2026-01-12 13:47:50] 2026-01-12 18:46:40,578 | INFO     |  -- lfn=log.47962010._003267.job.log.tgz.1, status_code=0, status=transferred
[2026-01-12 13:47:50] 2026-01-12 18:46:40,578 | INFO     | stage-out finished correctly
[2026-01-12 13:47:50] 2026-01-12 18:46:40,691 | INFO     | time since job start (2158s) is within the limit (349056.0s)
[2026-01-12 13:47:50] 2026-01-12 18:46:42,696 | INFO     | time since job start (2160s) is within the limit (349056.0s)
[2026-01-12 13:47:50] 2026-01-12 18:46:42,709 | INFO     | monitor loop #170: job 0:6967339966 is in state 'finished'
[2026-01-12 13:47:50] 2026-01-12 18:46:42,709 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 13:47:50] 2026-01-12 18:46:42,951 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-12 13:47:50] 2026-01-12 18:46:44,702 | INFO     | time since job start (2162s) is within the limit (349056.0s)
[2026-01-12 13:47:50] 2026-01-12 18:46:45,146 | INFO     | job 6967339966 has state=finished
[2026-01-12 13:47:50] 2026-01-12 18:46:45,147 | INFO     | preparing for final server update for job 6967339966 in state='finished'
[2026-01-12 13:47:50] 2026-01-12 18:46:45,147 | INFO     | this job has now completed (state=finished)
[2026-01-12 13:47:50] 2026-01-12 18:46:45,147 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-12 13:47:50] 2026-01-12 18:46:45,147 | INFO     | log transfer has been attempted: DONE
[2026-01-12 13:47:50] 2026-01-12 18:46:45,148 | INFO     | job 6967339966 has finished - writing final server update
[2026-01-12 13:47:50] 2026-01-12 18:46:45,148 | INFO     | total number of processed events: 50 (read)
[2026-01-12 13:47:50] 2026-01-12 18:46:45,149 | INFO     | executing command: lscpu
[2026-01-12 13:47:50] 2026-01-12 18:46:45,176 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-12 13:47:50] 2026-01-12 18:46:45,212 | INFO     | monitor loop #171: job 0:6967339966 is in state 'finished'
[2026-01-12 13:47:50] 2026-01-12 18:46:45,213 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 13:47:50] 2026-01-12 18:46:46,708 | INFO     | time since job start (2164s) is within the limit (349056.0s)
[2026-01-12 13:47:50] 2026-01-12 18:46:47,715 | INFO     | monitor loop #172: job 0:6967339966 is in state 'finished'
[2026-01-12 13:47:50] 2026-01-12 18:46:47,715 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 13:47:50] 2026-01-12 18:46:48,712 | INFO     | time since job start (2166s) is within the limit (349056.0s)
[2026-01-12 13:47:50] 2026-01-12 18:46:50,219 | INFO     | monitor loop #173: job 0:6967339966 is in state 'finished'
[2026-01-12 13:47:50] 2026-01-12 18:46:50,219 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 13:47:50] 2026-01-12 18:46:50,705 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-12 13:47:50] 2026-01-12 18:46:50,709 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2026-01-12 13:47:50] 2026-01-12 18:46:50,712 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6967339966/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 13:47:50] 2026-01-12 18:46:50,713 | INFO     | extracted standard info from prmon json
[2026-01-12 13:47:50] 2026-01-12 18:46:50,713 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 13:47:50] 2026-01-12 18:46:50,713 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 13:47:50] 2026-01-12 18:46:50,715 | INFO     | fitting pss+swap vs Time
[2026-01-12 13:47:50] 2026-01-12 18:46:50,715 | INFO     | sum of square deviations: 6796012.678571429
[2026-01-12 13:47:50] 2026-01-12 18:46:50,715 | INFO     | sum of deviations: -3465254203.035714
[2026-01-12 13:47:50] 2026-01-12 18:46:50,715 | INFO     | mean x: 1768242599.607143
[2026-01-12 13:47:50] 2026-01-12 18:46:50,715 | INFO     | mean y: 2718283.1785714286
[2026-01-12 13:47:50] 2026-01-12 18:46:50,715 | INFO     | intersect: 901621121614.862
[2026-01-12 13:47:50] 2026-01-12 18:46:50,716 | INFO     | chi2: 0.5717114115530971
[2026-01-12 13:47:50] 2026-01-12 18:46:50,716 | INFO     | current memory leak: -509.90 B/s (using 28 data points, chi2=0.57)
[2026-01-12 13:47:50] 2026-01-12 18:46:50,716 | INFO     | could have reported an average CPU frequency of 1769 MHz (5 samples)
[2026-01-12 13:47:50] 2026-01-12 18:46:50,716 | INFO     | ..............................
[2026-01-12 13:47:50] 2026-01-12 18:46:50,716 | INFO     | . Timing measurements:
[2026-01-12 13:47:50] 2026-01-12 18:46:50,716 | INFO     | . get job = 0 s
[2026-01-12 13:47:50] 2026-01-12 18:46:50,716 | INFO     | . initial setup = 2 s
[2026-01-12 13:47:50] 2026-01-12 18:46:50,717 | INFO     | . payload setup = 7 s
[2026-01-12 13:47:50] 2026-01-12 18:46:50,717 | INFO     | . stage-in = 0 s
[2026-01-12 13:47:50] 2026-01-12 18:46:50,717 | INFO     | . payload execution = 2130 s
[2026-01-12 13:47:50] 2026-01-12 18:46:50,717 | INFO     | . stage-out = 0 s
[2026-01-12 13:47:50] 2026-01-12 18:46:50,717 | INFO     | . log creation = 0 s
[2026-01-12 13:47:50] 2026-01-12 18:46:50,717 | INFO     | ..............................
[2026-01-12 13:47:50] 2026-01-12 18:46:50,718 | INFO     | time since job start (2168s) is within the limit (349056.0s)
[2026-01-12 13:47:50] 2026-01-12 18:46:50,990 | INFO     | 
[2026-01-12 13:47:50] 2026-01-12 18:46:50,991 | INFO     | job summary report
[2026-01-12 13:47:50] 2026-01-12 18:46:50,991 | INFO     | --------------------------------------------------
[2026-01-12 13:47:50] 2026-01-12 18:46:50,991 | INFO     | PanDA job id: 6967339966
[2026-01-12 13:47:50] 2026-01-12 18:46:50,991 | INFO     | task id: 47962010
[2026-01-12 13:47:50] 2026-01-12 18:46:50,991 | INFO     | errors: (none)
[2026-01-12 13:47:50] 2026-01-12 18:46:50,991 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 13:47:50] 2026-01-12 18:46:50,992 | INFO     | pilot state: finished 
[2026-01-12 13:47:50] 2026-01-12 18:46:50,992 | INFO     | transexitcode: 0
[2026-01-12 13:47:50] 2026-01-12 18:46:50,992 | INFO     | exeerrorcode: 0
[2026-01-12 13:47:50] 2026-01-12 18:46:50,992 | INFO     | exeerrordiag: 
[2026-01-12 13:47:50] 2026-01-12 18:46:50,992 | INFO     | exitcode: 0
[2026-01-12 13:47:50] 2026-01-12 18:46:50,992 | INFO     | exitmsg: OK
[2026-01-12 13:47:50] 2026-01-12 18:46:50,992 | INFO     | cpuconsumptiontime: 17752 s
[2026-01-12 13:47:50] 2026-01-12 18:46:50,993 | INFO     | nevents: 50
[2026-01-12 13:47:50] 2026-01-12 18:46:50,993 | INFO     | neventsw: 0
[2026-01-12 13:47:50] 2026-01-12 18:46:50,993 | INFO     | pid: 20575
[2026-01-12 13:47:50] 2026-01-12 18:46:50,993 | INFO     | pgrp: 20575
[2026-01-12 13:47:50] 2026-01-12 18:46:50,993 | INFO     | corecount: 12
[2026-01-12 13:47:50] 2026-01-12 18:46:50,993 | INFO     | event service: False
[2026-01-12 13:47:50] 2026-01-12 18:46:50,994 | INFO     | sizes: {0: 2284569, 5: 2284831, 11: 2284887, 2141: 2310753, 2142: 2319747, 2144: 2319803, 2152: 2320209}
[2026-01-12 13:47:50] 2026-01-12 18:46:50,994 | INFO     | --------------------------------------------------
[2026-01-12 13:47:50] 2026-01-12 18:46:50,994 | INFO     | 
[2026-01-12 13:47:50] 2026-01-12 18:46:50,994 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-12 13:47:50] 2026-01-12 18:46:51,018 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 13:47:50] 2026-01-12 18:46:51,019 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 13:47:50] 2026-01-12 18:46:51,019 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 13:47:50] 2026-01-12 18:46:51,019 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 13:47:50] 2026-01-12 18:46:51,019 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 13:47:50] 2026-01-12 18:46:51,019 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 13:47:50] 2026-01-12 18:46:51,019 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 13:47:50] 2026-01-12 18:46:51,020 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 13:47:50] 2026-01-12 18:46:51,020 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 13:47:50] 2026-01-12 18:46:51,020 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 13:47:50] 2026-01-12 18:46:51,020 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 13:47:50] 2026-01-12 18:46:51,020 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 13:47:50] 2026-01-12 18:46:51,020 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 13:47:50] 2026-01-12 18:46:51,021 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 13:47:50] 2026-01-12 18:46:51,021 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 13:47:50] 2026-01-12 18:46:51,021 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 13:47:50] 2026-01-12 18:46:51,021 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 13:47:50] 2026-01-12 18:46:51,021 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 13:47:50] 2026-01-12 18:46:51,021 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 13:47:50] 2026-01-12 18:46:51,022 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 13:47:50] 2026-01-12 18:46:51,022 | INFO     | job 6967339966 has completed (purged errors)
[2026-01-12 13:47:50] 2026-01-12 18:46:51,022 | INFO     | overall cleanup function is called
[2026-01-12 13:47:50] 2026-01-12 18:46:52,037 | INFO     | --- collectZombieJob: --- 10, [20575]
[2026-01-12 13:47:50] 2026-01-12 18:46:52,037 | INFO     | zombie collector waiting for pid 20575
[2026-01-12 13:47:50] 2026-01-12 18:46:52,037 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 13:47:50] 2026-01-12 18:46:52,037 | INFO     | collected zombie processes
[2026-01-12 13:47:50] 2026-01-12 18:46:52,037 | INFO     | will attempt to kill all subprocesses of pid=20575
[2026-01-12 13:47:50] 2026-01-12 18:46:52,130 | INFO     | process IDs to be killed: [20575] (in reverse order)
[2026-01-12 13:47:50] 2026-01-12 18:46:52,182 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 13:47:50] 2026-01-12 18:46:52,182 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 13:47:50] 2026-01-12 18:46:52,185 | INFO     | did not find any defunct processes belonging to 20575
[2026-01-12 13:47:50] 2026-01-12 18:46:52,187 | INFO     | did not find any defunct processes belonging to 20575
[2026-01-12 13:47:50] 2026-01-12 18:46:52,187 | INFO     | ready for new job
[2026-01-12 13:47:50] 2026-01-12 18:46:52,188 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 13:47:50] 2026-01-12 18:46:52,189 | INFO     | ***************************************
[2026-01-12 13:47:50] 2026-01-12 18:46:52,189 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 13:47:50] 2026-01-12 18:46:52,189 | INFO     | ***************************************
[2026-01-12 13:47:50] 2026-01-12 18:46:52,189 | INFO     | 
[2026-01-12 13:47:50] 2026-01-12 18:46:52,190 | INFO     | architecture information:
[2026-01-12 13:47:50] 2026-01-12 18:46:52,190 | INFO     | executing command: cat /etc/os-release
[2026-01-12 13:47:50] 2026-01-12 18:46:52,206 | INFO     | cat /etc/os-release:
[2026-01-12 13:47:50] NAME="CentOS Linux"
[2026-01-12 13:47:50] VERSION="7 (Core)"
[2026-01-12 13:47:50] ID="centos"
[2026-01-12 13:47:50] ID_LIKE="rhel fedora"
[2026-01-12 13:47:50] VERSION_ID="7"
[2026-01-12 13:47:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 13:47:50] ANSI_COLOR="0;31"
[2026-01-12 13:47:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 13:47:50] HOME_URL="https://www.centos.org/"
[2026-01-12 13:47:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 13:47:50] 
[2026-01-12 13:47:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 13:47:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 13:47:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 13:47:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 13:47:50] 
[2026-01-12 13:47:50] 2026-01-12 18:46:52,206 | INFO     | ***************************************
[2026-01-12 13:47:50] 2026-01-12 18:46:52,709 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-12 13:47:50] 2026-01-12 18:46:52,726 | INFO     | sufficient remaining disk space (29147267072 B)
[2026-01-12 13:47:50] 2026-01-12 18:46:52,727 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 13:47:50] 2026-01-12 18:46:52,727 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 13:47:50] 2026-01-12 18:46:52,727 | INFO     | update_server=False
[2026-01-12 13:47:50] 2026-01-12 18:46:52,727 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 13:47:50] 2026-01-12 18:46:52,728 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 13:47:50] 2026-01-12 18:46:53,456 | INFO     | all payload control threads have been joined
[2026-01-12 13:47:50] 2026-01-12 18:46:53,538 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 13:47:50] 2026-01-12 18:46:53,619 | INFO     | all data control threads have been joined
[2026-01-12 13:47:50] 2026-01-12 18:46:53,676 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 13:47:50] 2026-01-12 18:46:53,724 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 13:47:50] 2026-01-12 18:46:53,724 | INFO     | aborting loop
[2026-01-12 13:47:50] 2026-01-12 18:46:53,733 | INFO     | [job] retrieve thread has finished
[2026-01-12 13:47:50] 2026-01-12 18:46:53,733 | INFO     | [job] queue monitor thread has finished
[2026-01-12 13:47:50] 2026-01-12 18:46:53,762 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 13:47:50] 2026-01-12 18:46:53,824 | INFO     | all job control threads have been joined
[2026-01-12 13:47:50] 2026-01-12 18:46:53,889 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 13:47:50] 2026-01-12 18:46:54,210 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 13:47:50] 2026-01-12 18:46:54,273 | INFO     | [payload] failed_post thread has finished
[2026-01-12 13:47:50] 2026-01-12 18:46:54,329 | INFO     | [data] copytool_in thread has finished
[2026-01-12 13:47:50] 2026-01-12 18:46:54,462 | INFO     | [payload] control thread has finished
[2026-01-12 13:47:50] 2026-01-12 18:46:54,625 | INFO     | [data] control thread has finished
[2026-01-12 13:47:50] 2026-01-12 18:46:54,730 | INFO     | [job] job monitor thread has finished
[2026-01-12 13:47:50] 2026-01-12 18:46:54,825 | INFO     | [job] control thread has finished
[2026-01-12 13:47:50] 2026-01-12 18:46:54,986 | INFO     | [job] validate thread has finished
[2026-01-12 13:47:50] 2026-01-12 18:46:55,198 | INFO     | [payload] validate_post thread has finished
[2026-01-12 13:47:50] 2026-01-12 18:46:55,681 | INFO     | [data] copytool_out thread has finished
[2026-01-12 13:47:50] 2026-01-12 18:46:57,544 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 13:47:50] 2026-01-12 18:47:03,186 | INFO     | job.realtimelogging is not enabled
[2026-01-12 13:47:50] 2026-01-12 18:47:04,191 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 13:47:50] 2026-01-12 18:47:23,919 | INFO     | PID=14097 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-12 13:47:50] 2026-01-12 18:47:23,920 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 13:47:50] 2026-01-12 18:47:23,920 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 13:47:50] 2026-01-12 18:47:23,920 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 13:47:50] 2026-01-12 18:47:44,863 | INFO     | [monitor] cgroup control has ended
[2026-01-12 13:47:50] 2026-01-12 18:47:45,141 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139693844916032)>', '<ExcThread(monitor, started 139693224072960)>']
[2026-01-12 13:47:50] 2026-01-12 18:47:46,027 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 13:47:50] 2026-01-12 18:47:46,027 | INFO     | [monitor] control thread has ended
[2026-01-12 13:47:50] 2026-01-12 18:47:50,147 | INFO     | all workflow threads have been joined
[2026-01-12 13:47:50] 2026-01-12 18:47:50,147 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 13:47:50] 2026-01-12 18:47:50,148 | INFO     | traces error code: 0
[2026-01-12 13:47:50] 2026-01-12 18:47:50,148 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 13:47:50] 2026-01-12 18:47:50,243 [wrapper] ==== pilot stdout END ====
[2026-01-12 13:47:50] 2026-01-12 18:47:50,247 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 13:47:50] 2026-01-12 18:47:50,250 [wrapper] pilotpid: 14097
[2026-01-12 13:47:50] 2026-01-12 18:47:50,254 [wrapper] Pilot exit status: 0
[2026-01-12 13:47:50] 2026-01-12 18:47:50,269 [wrapper] pandaids: 6967339966
[2026-01-12 13:47:50] 2026-01-12 18:47:50,311 [wrapper] cleanup supervisor_pilot  2024 14098
[2026-01-12 13:47:50] 2026-01-12 18:47:50,316 [wrapper] Test setup, not cleaning
[2026-01-12 13:47:50] 2026-01-12 18:47:50,320 [wrapper] apfmon messages muted
[2026-01-12 13:47:50] 2026-01-12 18:47:50,324 [wrapper] ==== wrapper stdout END ====
[2026-01-12 13:47:50] 2026-01-12 18:47:50,328 [wrapper] ==== wrapper stderr END ====
[2026-01-12 13:47:50]  *** Error codes and diagnostics ***
[2026-01-12 13:47:50]     "exeErrorCode": 0,
[2026-01-12 13:47:50]     "exeErrorDiag": "",
[2026-01-12 13:47:50]     "pilotErrorCode": 0,
[2026-01-12 13:47:50]     "pilotErrorDiag": "",
[2026-01-12 13:47:50]  *** Listing of results directory ***
[2026-01-12 13:47:50] total 435556
[2026-01-12 13:47:50] -rw-r--r-- 1 boincer umatlas      5112 Jan 12 12:19 queuedata.json
[2026-01-12 13:47:50] -rw-r--r-- 1 boincer umatlas    579449 Jan 12 12:19 pilot3.tar.gz
[2026-01-12 13:47:50] -rwx------ 1 boincer umatlas     36322 Jan 12 12:23 runpilot2-wrapper.sh
[2026-01-12 13:47:50] -rw-r--r-- 1 boincer umatlas       100 Jan 12 13:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 13:47:50] -rwxr-xr-x 1 boincer umatlas      7986 Jan 12 13:10 run_atlas
[2026-01-12 13:47:50] -rw-r--r-- 1 boincer umatlas       105 Jan 12 13:10 job.xml
[2026-01-12 13:47:50] -rw-r--r-- 2 boincer umatlas 393778295 Jan 12 13:10 EVNT.47962006._000109.pool.root.1
[2026-01-12 13:47:50] -rw-r--r-- 2 boincer umatlas     15847 Jan 12 13:10 start_atlas.sh
[2026-01-12 13:47:50] drwxrwx--x 2 boincer umatlas      4096 Jan 12 13:10 shared
[2026-01-12 13:47:50] -rw-r--r-- 2 boincer umatlas    592613 Jan 12 13:10 input.tar.gz
[2026-01-12 13:47:50] -rw-r--r-- 1 boincer umatlas         0 Jan 12 13:10 boinc_lockfile
[2026-01-12 13:47:50] -rw-r--r-- 1 boincer umatlas      2890 Jan 12 13:10 pandaJob.out
[2026-01-12 13:47:50] -rw------- 1 boincer umatlas        57 Jan 12 13:10 setup.sh.local
[2026-01-12 13:47:50] -rw------- 1 boincer umatlas    988539 Jan 12 13:10 agis_schedconf.cvmfs.json
[2026-01-12 13:47:50] -rw------- 1 boincer umatlas   1516240 Jan 12 13:10 agis_ddmendpoints.agis.ALL.json
[2026-01-12 13:47:50] drwx------ 5 boincer umatlas      4096 Jan 12 13:10 pilot3
[2026-01-12 13:47:50] -rw-r--r-- 1 boincer umatlas       529 Jan 12 13:35 boinc_task_state.xml
[2026-01-12 13:47:50] -rw-r--r-- 1 boincer umatlas      5953 Jan 12 13:39 init_data.xml
[2026-01-12 13:47:50] -rw------- 1 boincer umatlas  44388262 Jan 12 13:46 HITS.47962010._003267.pool.root.1
[2026-01-12 13:47:50] -rw------- 1 boincer umatlas      1047 Jan 12 13:46 memory_monitor_summary.json
[2026-01-12 13:47:50] -rw------- 1 boincer umatlas   1608371 Jan 12 13:46 log.47962010._003267.job.log.tgz.1
[2026-01-12 13:47:50] -rw------- 1 boincer umatlas      8632 Jan 12 13:46 heartbeat.json
[2026-01-12 13:47:50] -rw------- 1 boincer umatlas        95 Jan 12 13:47 pilot_heartbeat.json
[2026-01-12 13:47:50] -rw-r--r-- 1 boincer umatlas      8192 Jan 12 13:47 boinc_mmap_file
[2026-01-12 13:47:50] -rw-r--r-- 1 boincer umatlas        27 Jan 12 13:47 wrapper_checkpoint.txt
[2026-01-12 13:47:50] -rw------- 1 boincer umatlas      4818 Jan 12 13:47 pilotlog.txt
[2026-01-12 13:47:50] -rw------- 1 boincer umatlas    354228 Jan 12 13:47 log.47962010._003267.job.log.1
[2026-01-12 13:47:50] -rw------- 1 boincer umatlas       353 Jan 12 13:47 output.list
[2026-01-12 13:47:50] -rw-r--r-- 1 boincer umatlas       620 Jan 12 13:47 runtime_log
[2026-01-12 13:47:50] -rw------- 1 boincer umatlas   1986560 Jan 12 13:47 result.tar.gz
[2026-01-12 13:47:50] -rw-r--r-- 1 boincer umatlas      9344 Jan 12 13:47 runtime_log.err
[2026-01-12 13:47:50] -rw------- 1 boincer umatlas       659 Jan 12 13:47 CGuNDmLoaz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmklnKDmlpBmVn.diag
[2026-01-12 13:47:50] -rw-r--r-- 1 boincer umatlas     21926 Jan 12 13:47 stderr.txt
[2026-01-12 13:47:50] HITS file was successfully produced:
[2026-01-12 13:47:50] -rw------- 1 boincer umatlas 44388262 Jan 12 13:46 shared/HITS.pool.root.1
[2026-01-12 13:47:50]  *** Contents of shared directory: ***
[2026-01-12 13:47:50] total 430436
[2026-01-12 13:47:50] -rw-r--r-- 2 boincer umatlas 393778295 Jan 12 13:10 ATLAS.root_0
[2026-01-12 13:47:50] -rw-r--r-- 2 boincer umatlas     15847 Jan 12 13:10 start_atlas.sh
[2026-01-12 13:47:50] -rw-r--r-- 2 boincer umatlas    592613 Jan 12 13:10 input.tar.gz
[2026-01-12 13:47:50] -rw------- 1 boincer umatlas  44388262 Jan 12 13:46 HITS.pool.root.1
[2026-01-12 13:47:50] -rw------- 1 boincer umatlas   1986560 Jan 12 13:47 result.tar.gz
13:47:52 (10415): run_atlas exited; CPU time 17401.695926
13:47:52 (10415): called boinc_finish(0)

</stderr_txt>
]]>

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