Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:10:13 (7294): wrapper (7.7.26015): starting
13:10:13 (7294): wrapper: running run_atlas (--nthreads 12)
[2026-01-12 13:10:13] Arguments: --nthreads 12
[2026-01-12 13:10:13] Threads: 12
[2026-01-12 13:10:13] Checking for CVMFS
[2026-01-12 13:10:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 13:10:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 13:10:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 13:10:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 13:10:13] 2.11.2.0 3165 141324 97848 155061 2 1 10205741 20275200 1 130560 0 51801678 99.886 8496211 40840 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 13:10:13] CVMFS is ok
[2026-01-12 13:10:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 13:10:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 13:10:13] Further information can be found at the LHC@home message board.
[2026-01-12 13:10:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 13:10:13] Checking for apptainer binary...
[2026-01-12 13:10:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 13:10:13] Running /usr/bin/apptainer --version
[2026-01-12 13:10:13] apptainer version 1.3.2-1.el7
[2026-01-12 13:10:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 13:10:15] c-115-40.aglt2.org
[2026-01-12 13:10:15] apptainer works
[2026-01-12 13:10:15] Set ATHENA_PROC_NUMBER=12
[2026-01-12 13:10:15] Set ATHENA_CORE_NUMBER=12
[2026-01-12 13:10:15] Starting ATLAS job with PandaID=6967339962
[2026-01-12 13:10:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 13:42:39]  *** The last 200 lines of the pilot log: ***
[2026-01-12 13:42:39]  replicas=None
[2026-01-12 13:42:39]  scope=mc16_13TeV
[2026-01-12 13:42:39]  status=None
[2026-01-12 13:42:39]  status_code=0
[2026-01-12 13:42:39]  storage_token=
[2026-01-12 13:42:39]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6967339962/log.47962010._003263.job.log.tgz.1
[2026-01-12 13:42:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/ac/d4/log.47962010._003263.job.log.tgz.1
[2026-01-12 13:42:39]  workdir=None
[2026-01-12 13:42:39] ]
[2026-01-12 13:42:39] 2026-01-12 18:41:59,220 | INFO     | transferring file log.47962010._003263.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6967339962/log.47962010._003263.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-12 13:42:39] 2026-01-12 18:41:59,220 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6967339962/log.47962010._003263.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._003263.job
[2026-01-12 13:42:39] 2026-01-12 18:41:59,242 | INFO     | adding to output.list: log.47962010._003263.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/ac/d4/log.47962010._003263.job.log.tgz.
[2026-01-12 13:42:39] 2026-01-12 18:41:59,243 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-12 13:42:39] 2026-01-12 18:41:59,243 | INFO     | summary of transferred files:
[2026-01-12 13:42:39] 2026-01-12 18:41:59,244 | INFO     |  -- lfn=log.47962010._003263.job.log.tgz.1, status_code=0, status=transferred
[2026-01-12 13:42:39] 2026-01-12 18:41:59,244 | INFO     | stage-out finished correctly
[2026-01-12 13:42:39] 2026-01-12 18:41:59,960 | INFO     | time since job start (1888s) is within the limit (349056.0s)
[2026-01-12 13:42:39] 2026-01-12 18:42:00,958 | WARNING  | process 17422 can no longer be monitored (due to stat problems) - aborting
[2026-01-12 13:42:39] 2026-01-12 18:42:00,958 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6967339962/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 13:42:39] 2026-01-12 18:42:01,130 | INFO     | number of running child processes to parent process 17422: 1
[2026-01-12 13:42:39] 2026-01-12 18:42:01,130 | INFO     | maximum number of monitored processes: 20
[2026-01-12 13:42:39] 2026-01-12 18:42:01,164 | INFO     | PID=11050 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-12 13:42:39] 2026-01-12 18:42:01,627 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-12 13:42:39] 2026-01-12 18:42:01,698 | INFO     | job 6967339962 has state=finished
[2026-01-12 13:42:39] 2026-01-12 18:42:01,699 | INFO     | preparing for final server update for job 6967339962 in state='finished'
[2026-01-12 13:42:39] 2026-01-12 18:42:01,699 | INFO     | this job has now completed (state=finished)
[2026-01-12 13:42:39] 2026-01-12 18:42:01,699 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-12 13:42:39] 2026-01-12 18:42:01,699 | INFO     | log transfer has been attempted: DONE
[2026-01-12 13:42:39] 2026-01-12 18:42:01,699 | INFO     | job 6967339962 has finished - writing final server update
[2026-01-12 13:42:39] 2026-01-12 18:42:01,700 | INFO     | total number of processed events: 50 (read)
[2026-01-12 13:42:39] 2026-01-12 18:42:01,701 | INFO     | executing command: lscpu
[2026-01-12 13:42:39] 2026-01-12 18:42:01,724 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-12 13:42:39] 2026-01-12 18:42:02,165 | INFO     | time since job start (1891s) is within the limit (349056.0s)
[2026-01-12 13:42:39] 2026-01-12 18:42:03,633 | INFO     | monitor loop #148: job 0:6967339962 is in state 'finished'
[2026-01-12 13:42:39] 2026-01-12 18:42:03,633 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 13:42:39] 2026-01-12 18:42:04,170 | INFO     | time since job start (1893s) is within the limit (349056.0s)
[2026-01-12 13:42:39] 2026-01-12 18:42:06,137 | INFO     | monitor loop #149: job 0:6967339962 is in state 'finished'
[2026-01-12 13:42:39] 2026-01-12 18:42:06,137 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 13:42:39] 2026-01-12 18:42:06,175 | INFO     | time since job start (1895s) is within the limit (349056.0s)
[2026-01-12 13:42:39] 2026-01-12 18:42:06,427 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-12 13:42:39] 2026-01-12 18:42:06,430 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1795.5833333333333
[2026-01-12 13:42:39] 2026-01-12 18:42:06,433 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6967339962/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 13:42:39] 2026-01-12 18:42:06,434 | INFO     | extracted standard info from prmon json
[2026-01-12 13:42:39] 2026-01-12 18:42:06,434 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 13:42:39] 2026-01-12 18:42:06,434 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 13:42:39] 2026-01-12 18:42:06,435 | INFO     | fitting pss+swap vs Time
[2026-01-12 13:42:39] 2026-01-12 18:42:06,435 | INFO     | sum of square deviations: 4278847.625
[2026-01-12 13:42:39] 2026-01-12 18:42:06,436 | INFO     | sum of deviations: -1752808669.125
[2026-01-12 13:42:39] 2026-01-12 18:42:06,436 | INFO     | mean x: 1768242466.625
[2026-01-12 13:42:39] 2026-01-12 18:42:06,436 | INFO     | mean y: 3381273.2083333335
[2026-01-12 13:42:39] 2026-01-12 18:42:06,436 | INFO     | intersect: 724355121799.438
[2026-01-12 13:42:39] 2026-01-12 18:42:06,436 | INFO     | chi2: 0.492887942456837
[2026-01-12 13:42:39] 2026-01-12 18:42:06,437 | INFO     | current memory leak: -409.65 B/s (using 24 data points, chi2=0.49)
[2026-01-12 13:42:39] 2026-01-12 18:42:06,437 | INFO     | could have reported an average CPU frequency of 1788 MHz (5 samples)
[2026-01-12 13:42:39] 2026-01-12 18:42:06,437 | INFO     | ..............................
[2026-01-12 13:42:39] 2026-01-12 18:42:06,437 | INFO     | . Timing measurements:
[2026-01-12 13:42:39] 2026-01-12 18:42:06,437 | INFO     | . get job = 0 s
[2026-01-12 13:42:39] 2026-01-12 18:42:06,437 | INFO     | . initial setup = 2 s
[2026-01-12 13:42:39] 2026-01-12 18:42:06,438 | INFO     | . payload setup = 7 s
[2026-01-12 13:42:39] 2026-01-12 18:42:06,438 | INFO     | . stage-in = 0 s
[2026-01-12 13:42:39] 2026-01-12 18:42:06,438 | INFO     | . payload execution = 1858 s
[2026-01-12 13:42:39] 2026-01-12 18:42:06,438 | INFO     | . stage-out = 0 s
[2026-01-12 13:42:39] 2026-01-12 18:42:06,438 | INFO     | . log creation = 0 s
[2026-01-12 13:42:39] 2026-01-12 18:42:06,438 | INFO     | ..............................
[2026-01-12 13:42:39] 2026-01-12 18:42:06,512 | INFO     | 
[2026-01-12 13:42:39] 2026-01-12 18:42:06,512 | INFO     | job summary report
[2026-01-12 13:42:39] 2026-01-12 18:42:06,513 | INFO     | --------------------------------------------------
[2026-01-12 13:42:39] 2026-01-12 18:42:06,513 | INFO     | PanDA job id: 6967339962
[2026-01-12 13:42:39] 2026-01-12 18:42:06,513 | INFO     | task id: 47962010
[2026-01-12 13:42:39] 2026-01-12 18:42:06,513 | INFO     | errors: (none)
[2026-01-12 13:42:39] 2026-01-12 18:42:06,513 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 13:42:39] 2026-01-12 18:42:06,513 | INFO     | pilot state: finished 
[2026-01-12 13:42:39] 2026-01-12 18:42:06,514 | INFO     | transexitcode: 0
[2026-01-12 13:42:39] 2026-01-12 18:42:06,514 | INFO     | exeerrorcode: 0
[2026-01-12 13:42:39] 2026-01-12 18:42:06,514 | INFO     | exeerrordiag: 
[2026-01-12 13:42:39] 2026-01-12 18:42:06,514 | INFO     | exitcode: 0
[2026-01-12 13:42:39] 2026-01-12 18:42:06,514 | INFO     | exitmsg: OK
[2026-01-12 13:42:39] 2026-01-12 18:42:06,514 | INFO     | cpuconsumptiontime: 16351 s
[2026-01-12 13:42:39] 2026-01-12 18:42:06,515 | INFO     | nevents: 50
[2026-01-12 13:42:39] 2026-01-12 18:42:06,515 | INFO     | neventsw: 0
[2026-01-12 13:42:39] 2026-01-12 18:42:06,515 | INFO     | pid: 17422
[2026-01-12 13:42:39] 2026-01-12 18:42:06,515 | INFO     | pgrp: 17422
[2026-01-12 13:42:39] 2026-01-12 18:42:06,515 | INFO     | corecount: 12
[2026-01-12 13:42:39] 2026-01-12 18:42:06,515 | INFO     | event service: False
[2026-01-12 13:42:39] 2026-01-12 18:42:06,516 | INFO     | sizes: {0: 2283741, 1: 2284597, 6: 2284859, 12: 2284887, 1870: 2310578, 1871: 2310577, 1873: 2319755, 1875: 2319811, 1880: 2320089}
[2026-01-12 13:42:39] 2026-01-12 18:42:06,516 | INFO     | --------------------------------------------------
[2026-01-12 13:42:39] 2026-01-12 18:42:06,516 | INFO     | 
[2026-01-12 13:42:39] 2026-01-12 18:42:06,516 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-12 13:42:39] 2026-01-12 18:42:06,540 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 13:42:39] 2026-01-12 18:42:06,540 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 13:42:39] 2026-01-12 18:42:06,540 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 13:42:39] 2026-01-12 18:42:06,540 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 13:42:39] 2026-01-12 18:42:06,541 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 13:42:39] 2026-01-12 18:42:06,541 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 13:42:39] 2026-01-12 18:42:06,541 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 13:42:39] 2026-01-12 18:42:06,541 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 13:42:39] 2026-01-12 18:42:06,541 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 13:42:39] 2026-01-12 18:42:06,542 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 13:42:39] 2026-01-12 18:42:06,542 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 13:42:39] 2026-01-12 18:42:06,542 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 13:42:39] 2026-01-12 18:42:06,542 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 13:42:39] 2026-01-12 18:42:06,542 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 13:42:39] 2026-01-12 18:42:06,542 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 13:42:39] 2026-01-12 18:42:06,543 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 13:42:39] 2026-01-12 18:42:06,543 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 13:42:39] 2026-01-12 18:42:06,543 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 13:42:39] 2026-01-12 18:42:06,543 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 13:42:39] 2026-01-12 18:42:06,543 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 13:42:39] 2026-01-12 18:42:06,543 | INFO     | job 6967339962 has completed (purged errors)
[2026-01-12 13:42:39] 2026-01-12 18:42:06,544 | INFO     | overall cleanup function is called
[2026-01-12 13:42:39] 2026-01-12 18:42:07,559 | INFO     | --- collectZombieJob: --- 10, [17422]
[2026-01-12 13:42:39] 2026-01-12 18:42:07,559 | INFO     | zombie collector waiting for pid 17422
[2026-01-12 13:42:39] 2026-01-12 18:42:07,559 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 13:42:39] 2026-01-12 18:42:07,559 | INFO     | collected zombie processes
[2026-01-12 13:42:39] 2026-01-12 18:42:07,560 | INFO     | will attempt to kill all subprocesses of pid=17422
[2026-01-12 13:42:39] 2026-01-12 18:42:07,645 | INFO     | process IDs to be killed: [17422] (in reverse order)
[2026-01-12 13:42:39] 2026-01-12 18:42:07,694 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 13:42:39] 2026-01-12 18:42:07,695 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 13:42:39] 2026-01-12 18:42:07,697 | INFO     | did not find any defunct processes belonging to 17422
[2026-01-12 13:42:39] 2026-01-12 18:42:07,700 | INFO     | did not find any defunct processes belonging to 17422
[2026-01-12 13:42:39] 2026-01-12 18:42:07,700 | INFO     | ready for new job
[2026-01-12 13:42:39] 2026-01-12 18:42:07,700 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 13:42:39] 2026-01-12 18:42:07,701 | INFO     | ***************************************
[2026-01-12 13:42:39] 2026-01-12 18:42:07,701 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 13:42:39] 2026-01-12 18:42:07,701 | INFO     | ***************************************
[2026-01-12 13:42:39] 2026-01-12 18:42:07,702 | INFO     | 
[2026-01-12 13:42:39] 2026-01-12 18:42:07,702 | INFO     | architecture information:
[2026-01-12 13:42:39] 2026-01-12 18:42:07,703 | INFO     | executing command: cat /etc/os-release
[2026-01-12 13:42:39] 2026-01-12 18:42:07,718 | INFO     | cat /etc/os-release:
[2026-01-12 13:42:39] NAME="CentOS Linux"
[2026-01-12 13:42:39] VERSION="7 (Core)"
[2026-01-12 13:42:39] ID="centos"
[2026-01-12 13:42:39] ID_LIKE="rhel fedora"
[2026-01-12 13:42:39] VERSION_ID="7"
[2026-01-12 13:42:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 13:42:39] ANSI_COLOR="0;31"
[2026-01-12 13:42:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 13:42:39] HOME_URL="https://www.centos.org/"
[2026-01-12 13:42:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 13:42:39] 
[2026-01-12 13:42:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 13:42:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 13:42:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 13:42:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 13:42:39] 
[2026-01-12 13:42:39] 2026-01-12 18:42:07,718 | INFO     | ***************************************
[2026-01-12 13:42:39] 2026-01-12 18:42:08,221 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-12 13:42:39] 2026-01-12 18:42:08,237 | INFO     | sufficient remaining disk space (18487443456 B)
[2026-01-12 13:42:39] 2026-01-12 18:42:08,237 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 13:42:39] 2026-01-12 18:42:08,238 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 13:42:39] 2026-01-12 18:42:08,238 | INFO     | update_server=False
[2026-01-12 13:42:39] 2026-01-12 18:42:08,238 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 13:42:39] 2026-01-12 18:42:08,238 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 13:42:39] 2026-01-12 18:42:08,239 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 13:42:39] 2026-01-12 18:42:08,239 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 13:42:39] 2026-01-12 18:42:08,247 | INFO     | all data control threads have been joined
[2026-01-12 13:42:39] 2026-01-12 18:42:08,495 | INFO     | all payload control threads have been joined
[2026-01-12 13:42:39] 2026-01-12 18:42:08,640 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-12 13:42:39] 2026-01-12 18:42:08,640 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-12 13:42:39] 2026-01-12 18:42:08,640 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 13:42:39] 2026-01-12 18:42:08,640 | INFO     | will abort loop
[2026-01-12 13:42:39] 2026-01-12 18:42:09,244 | INFO     | [job] retrieve thread has finished
[2026-01-12 13:42:39] 2026-01-12 18:42:09,245 | INFO     | [job] queue monitor thread has finished
[2026-01-12 13:42:39] 2026-01-12 18:42:09,252 | INFO     | [data] control thread has finished
[2026-01-12 13:42:39] 2026-01-12 18:42:09,467 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 13:42:39] 2026-01-12 18:42:09,501 | INFO     | [payload] control thread has finished
[2026-01-12 13:42:39] 2026-01-12 18:42:09,564 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 13:42:39] 2026-01-12 18:42:09,627 | INFO     | all job control threads have been joined
[2026-01-12 13:42:39] 2026-01-12 18:42:09,646 | INFO     | [job] job monitor thread has finished
[2026-01-12 13:42:39] 2026-01-12 18:42:09,798 | INFO     | [payload] validate_post thread has finished
[2026-01-12 13:42:39] 2026-01-12 18:42:09,932 | INFO     | [data] copytool_in thread has finished
[2026-01-12 13:42:39] 2026-01-12 18:42:10,020 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 13:42:39] 2026-01-12 18:42:10,244 | INFO     | [data] copytool_out thread has finished
[2026-01-12 13:42:39] 2026-01-12 18:42:10,531 | INFO     | [job] validate thread has finished
[2026-01-12 13:42:39] 2026-01-12 18:42:10,632 | INFO     | [job] control thread has finished
[2026-01-12 13:42:39] 2026-01-12 18:42:10,688 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 13:42:39] 2026-01-12 18:42:10,846 | INFO     | [payload] failed_post thread has finished
[2026-01-12 13:42:39] 2026-01-12 18:42:12,244 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 13:42:39] 2026-01-12 18:42:33,216 | INFO     | [monitor] cgroup control has ended
[2026-01-12 13:42:39] 2026-01-12 18:42:33,944 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139993203631936)>', '<ExcThread(monitor, started 139992244418304)>']
[2026-01-12 13:42:39] 2026-01-12 18:42:38,969 | INFO     | all workflow threads have been joined
[2026-01-12 13:42:39] 2026-01-12 18:42:38,970 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 13:42:39] 2026-01-12 18:42:38,978 | INFO     | traces error code: 0
[2026-01-12 13:42:39] 2026-01-12 18:42:38,978 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 13:42:39] 2026-01-12 18:42:39,375 | INFO     | PID=11050 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-12 13:42:39] 2026-01-12 18:42:39,375 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 13:42:39] 2026-01-12 18:42:39,375 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 13:42:39] 2026-01-12 18:42:39,375 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 13:42:39] 2026-01-12 18:42:39,375 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 13:42:39] 2026-01-12 18:42:39,375 | INFO     | [monitor] control thread has ended
[2026-01-12 13:42:39] 2026-01-12 18:42:39,455 [wrapper] ==== pilot stdout END ====
[2026-01-12 13:42:39] 2026-01-12 18:42:39,458 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 13:42:39] 2026-01-12 18:42:39,463 [wrapper] pilotpid: 11050
[2026-01-12 13:42:39] 2026-01-12 18:42:39,466 [wrapper] Pilot exit status: 0
[2026-01-12 13:42:39] 2026-01-12 18:42:39,481 [wrapper] pandaids: 6967339962
[2026-01-12 13:42:39] 2026-01-12 18:42:39,520 [wrapper] cleanup supervisor_pilot  2973 11051
[2026-01-12 13:42:39] 2026-01-12 18:42:39,524 [wrapper] Test setup, not cleaning
[2026-01-12 13:42:39] 2026-01-12 18:42:39,528 [wrapper] apfmon messages muted
[2026-01-12 13:42:39] 2026-01-12 18:42:39,532 [wrapper] ==== wrapper stdout END ====
[2026-01-12 13:42:39] 2026-01-12 18:42:39,536 [wrapper] ==== wrapper stderr END ====
[2026-01-12 13:42:39]  *** Error codes and diagnostics ***
[2026-01-12 13:42:39]     "exeErrorCode": 0,
[2026-01-12 13:42:39]     "exeErrorDiag": "",
[2026-01-12 13:42:39]     "pilotErrorCode": 0,
[2026-01-12 13:42:39]     "pilotErrorDiag": "",
[2026-01-12 13:42:39]  *** Listing of results directory ***
[2026-01-12 13:42:39] total 437736
[2026-01-12 13:42:39] -rw-r--r-- 1 boincer umatlas      5112 Jan 12 12:19 queuedata.json
[2026-01-12 13:42:39] -rw-r--r-- 1 boincer umatlas    579449 Jan 12 12:19 pilot3.tar.gz
[2026-01-12 13:42:39] -rwx------ 1 boincer umatlas     36322 Jan 12 12:23 runpilot2-wrapper.sh
[2026-01-12 13:42:39] -rw-r--r-- 1 boincer umatlas       100 Jan 12 13:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 13:42:39] -rwxr-xr-x 1 boincer umatlas      7986 Jan 12 13:10 run_atlas
[2026-01-12 13:42:39] -rw-r--r-- 1 boincer umatlas       105 Jan 12 13:10 job.xml
[2026-01-12 13:42:39] -rw-r--r-- 2 boincer umatlas 393778295 Jan 12 13:10 EVNT.47962006._000109.pool.root.1
[2026-01-12 13:42:39] -rw-r--r-- 2 boincer umatlas     15847 Jan 12 13:10 start_atlas.sh
[2026-01-12 13:42:39] drwxrwx--x 2 boincer umatlas      4096 Jan 12 13:10 shared
[2026-01-12 13:42:39] -rw-r--r-- 2 boincer umatlas    592618 Jan 12 13:10 input.tar.gz
[2026-01-12 13:42:39] -rw-r--r-- 1 boincer umatlas         0 Jan 12 13:10 boinc_lockfile
[2026-01-12 13:42:39] -rw-r--r-- 1 boincer umatlas      2890 Jan 12 13:10 pandaJob.out
[2026-01-12 13:42:39] -rw------- 1 boincer umatlas        57 Jan 12 13:10 setup.sh.local
[2026-01-12 13:42:39] -rw------- 1 boincer umatlas    988539 Jan 12 13:10 agis_schedconf.cvmfs.json
[2026-01-12 13:42:39] -rw------- 1 boincer umatlas   1516240 Jan 12 13:10 agis_ddmendpoints.agis.ALL.json
[2026-01-12 13:42:39] drwx------ 5 boincer umatlas      4096 Jan 12 13:10 pilot3
[2026-01-12 13:42:39] -rw-r--r-- 1 boincer umatlas       529 Jan 12 13:35 boinc_task_state.xml
[2026-01-12 13:42:39] -rw-r--r-- 1 boincer umatlas      5954 Jan 12 13:37 init_data.xml
[2026-01-12 13:42:39] -rw------- 1 boincer umatlas  46712876 Jan 12 13:41 HITS.47962010._003263.pool.root.1
[2026-01-12 13:42:39] -rw------- 1 boincer umatlas        95 Jan 12 13:41 pilot_heartbeat.json
[2026-01-12 13:42:39] -rw------- 1 boincer umatlas      1048 Jan 12 13:41 memory_monitor_summary.json
[2026-01-12 13:42:39] -rw------- 1 boincer umatlas   1603439 Jan 12 13:41 log.47962010._003263.job.log.tgz.1
[2026-01-12 13:42:39] -rw------- 1 boincer umatlas      8618 Jan 12 13:42 heartbeat.json
[2026-01-12 13:42:39] -rw-r--r-- 1 boincer umatlas        27 Jan 12 13:42 wrapper_checkpoint.txt
[2026-01-12 13:42:39] -rw-r--r-- 1 boincer umatlas      8192 Jan 12 13:42 boinc_mmap_file
[2026-01-12 13:42:39] -rw------- 1 boincer umatlas       745 Jan 12 13:42 pilotlog.txt
[2026-01-12 13:42:39] -rw------- 1 boincer umatlas    316179 Jan 12 13:42 log.47962010._003263.job.log.1
[2026-01-12 13:42:39] -rw------- 1 boincer umatlas       353 Jan 12 13:42 output.list
[2026-01-12 13:42:39] -rw-r--r-- 1 boincer umatlas       620 Jan 12 13:42 runtime_log
[2026-01-12 13:42:39] -rw------- 1 boincer umatlas   1935360 Jan 12 13:42 result.tar.gz
[2026-01-12 13:42:39] -rw------- 1 boincer umatlas       659 Jan 12 13:42 v6oNDmLoaz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmglnKDmG48LWn.diag
[2026-01-12 13:42:39] -rw-r--r-- 1 boincer umatlas      9344 Jan 12 13:42 runtime_log.err
[2026-01-12 13:42:39] -rw-r--r-- 1 boincer umatlas     22068 Jan 12 13:42 stderr.txt
[2026-01-12 13:42:39] HITS file was successfully produced:
[2026-01-12 13:42:39] -rw------- 1 boincer umatlas 46712876 Jan 12 13:41 shared/HITS.pool.root.1
[2026-01-12 13:42:39]  *** Contents of shared directory: ***
[2026-01-12 13:42:39] total 432660
[2026-01-12 13:42:39] -rw-r--r-- 2 boincer umatlas 393778295 Jan 12 13:10 ATLAS.root_0
[2026-01-12 13:42:39] -rw-r--r-- 2 boincer umatlas     15847 Jan 12 13:10 start_atlas.sh
[2026-01-12 13:42:39] -rw-r--r-- 2 boincer umatlas    592618 Jan 12 13:10 input.tar.gz
[2026-01-12 13:42:39] -rw------- 1 boincer umatlas  46712876 Jan 12 13:41 HITS.pool.root.1
[2026-01-12 13:42:39] -rw------- 1 boincer umatlas   1935360 Jan 12 13:42 result.tar.gz
13:42:41 (7294): run_atlas exited; CPU time 16121.778521
13:42:41 (7294): called boinc_finish(0)

</stderr_txt>
]]>

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