Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:27:42 (5692): wrapper (7.7.26015): starting
02:27:42 (5692): wrapper: running run_atlas (--nthreads 8)
[2026-01-13 02:27:42] Arguments: --nthreads 8
[2026-01-13 02:27:42] Threads: 8
[2026-01-13 02:27:42] Checking for CVMFS
[2026-01-13 02:27:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 02:27:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 02:27:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 02:27:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 02:27:46] 2.11.2.0 24263 40515 125156 155072 2 100 16206605 25165825 1088 130560 0 18415452 99.827 11021025 3156 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-13 02:27:46] CVMFS is ok
[2026-01-13 02:27:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 02:27:46] Checking for apptainer binary...
[2026-01-13 02:27:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 02:27:46] Running /usr/bin/apptainer --version
[2026-01-13 02:27:46] apptainer version 1.3.2-1.el7
[2026-01-13 02:27:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 02:28:16] cg-vwn484.simple-grid.lan
[2026-01-13 02:28:16] apptainer works
[2026-01-13 02:28:16] Set ATHENA_PROC_NUMBER=8
[2026-01-13 02:28:16] Set ATHENA_CORE_NUMBER=8
[2026-01-13 02:28:16] Starting ATLAS job with PandaID=6967339937
[2026-01-13 02:28:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 04:45:51]  *** The last 200 lines of the pilot log: ***
[2026-01-13 04:45:51] 2026-01-13 03:45:01,647 | INFO     | time since job start (7959s) is within the limit (349056.0s)
[2026-01-13 04:45:51] 2026-01-13 03:45:01,939 | INFO     | monitor loop #650: job 0:6967339937 is in state 'finished'
[2026-01-13 04:45:51] 2026-01-13 03:45:01,940 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 04:45:51] 2026-01-13 03:45:03,654 | INFO     | time since job start (7961s) is within the limit (349056.0s)
[2026-01-13 04:45:51] 2026-01-13 03:45:04,444 | INFO     | monitor loop #651: job 0:6967339937 is in state 'finished'
[2026-01-13 04:45:51] 2026-01-13 03:45:04,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 04:45:51] 2026-01-13 03:45:05,663 | INFO     | time since job start (7963s) is within the limit (349056.0s)
[2026-01-13 04:45:51] 2026-01-13 03:45:06,952 | INFO     | monitor loop #652: job 0:6967339937 is in state 'finished'
[2026-01-13 04:45:51] 2026-01-13 03:45:06,953 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 04:45:51] 2026-01-13 03:45:07,669 | INFO     | time since job start (7965s) is within the limit (349056.0s)
[2026-01-13 04:45:51] 2026-01-13 03:45:09,459 | INFO     | monitor loop #653: job 0:6967339937 is in state 'finished'
[2026-01-13 04:45:51] 2026-01-13 03:45:09,460 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 04:45:51] 2026-01-13 03:45:09,678 | INFO     | time since job start (7967s) is within the limit (349056.0s)
[2026-01-13 04:45:51] 2026-01-13 03:45:11,685 | INFO     | time since job start (7969s) is within the limit (349056.0s)
[2026-01-13 04:45:51] 2026-01-13 03:45:11,967 | INFO     | monitor loop #654: job 0:6967339937 is in state 'finished'
[2026-01-13 04:45:51] 2026-01-13 03:45:11,968 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 04:45:51] 2026-01-13 03:45:13,694 | INFO     | time since job start (7971s) is within the limit (349056.0s)
[2026-01-13 04:45:51] 2026-01-13 03:45:14,031 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 04:45:51] 2026-01-13 03:45:14,032 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-13 04:45:51] 2026-01-13 03:45:14,034 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6967339937/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 04:45:51] 2026-01-13 03:45:14,035 | INFO     | extracted standard info from prmon json
[2026-01-13 04:45:51] 2026-01-13 03:45:14,035 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 04:45:51] 2026-01-13 03:45:14,035 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 04:45:51] 2026-01-13 03:45:14,038 | INFO     | fitting pss+swap vs Time
[2026-01-13 04:45:51] 2026-01-13 03:45:14,038 | INFO     | sum of square deviations: 535811525.99166626
[2026-01-13 04:45:51] 2026-01-13 03:45:14,039 | INFO     | sum of deviations: 53780118718.52494
[2026-01-13 04:45:51] 2026-01-13 03:45:14,039 | INFO     | mean x: 1768272134.1583333
[2026-01-13 04:45:51] 2026-01-13 03:45:14,039 | INFO     | mean y: 1916563.025
[2026-01-13 04:45:51] 2026-01-13 03:45:14,039 | INFO     | intersect: -177481919988.81082
[2026-01-13 04:45:51] 2026-01-13 03:45:14,040 | INFO     | chi2: 31.409100296696714
[2026-01-13 04:45:51] 2026-01-13 03:45:14,040 | INFO     | sum of square deviations: 471611158.730435
[2026-01-13 04:45:51] 2026-01-13 03:45:14,041 | INFO     | sum of deviations: 80106233266.14784
[2026-01-13 04:45:51] 2026-01-13 03:45:14,041 | INFO     | mean x: 1768271981.6869564
[2026-01-13 04:45:51] 2026-01-13 03:45:14,041 | INFO     | mean y: 1979243.3652173914
[2026-01-13 04:45:51] 2026-01-13 03:45:14,041 | INFO     | intersect: -300350557419.09607
[2026-01-13 04:45:51] 2026-01-13 03:45:14,041 | INFO     | chi2: 26.24351783981546
[2026-01-13 04:45:51] 2026-01-13 03:45:14,042 | INFO     | current chi2=26.24351783981546 (change=16.4461331527682 %)
[2026-01-13 04:45:51] 2026-01-13 03:45:14,042 | INFO     | right removable region: 114
[2026-01-13 04:45:51] 2026-01-13 03:45:14,042 | INFO     | sum of square deviations: 471562968.730435
[2026-01-13 04:45:51] 2026-01-13 03:45:14,043 | INFO     | sum of deviations: 19144302173.93044
[2026-01-13 04:45:51] 2026-01-13 03:45:14,043 | INFO     | mean x: 1768272286.6869564
[2026-01-13 04:45:51] 2026-01-13 03:45:14,043 | INFO     | mean y: 1998810.8869565218
[2026-01-13 04:45:51] 2026-01-13 03:45:14,043 | INFO     | intersect: -71785527409.12343
[2026-01-13 04:45:51] 2026-01-13 03:45:14,043 | INFO     | chi2: 24.41620145411118
[2026-01-13 04:45:51] 2026-01-13 03:45:14,043 | INFO     | current chi2=24.41620145411118 (change=22.263925984919005 %)
[2026-01-13 04:45:51] 2026-01-13 03:45:14,043 | INFO     | left removable region: 10
[2026-01-13 04:45:51] 2026-01-13 03:45:14,044 | INFO     | sum of square deviations: 348774781.9903839
[2026-01-13 04:45:51] 2026-01-13 03:45:14,044 | INFO     | sum of deviations: 19643604497.211548
[2026-01-13 04:45:51] 2026-01-13 03:45:14,044 | INFO     | mean x: 1768272256.2596154
[2026-01-13 04:45:51] 2026-01-13 03:45:14,045 | INFO     | mean y: 2168230.2884615385
[2026-01-13 04:45:51] 2026-01-13 03:45:14,045 | INFO     | intersect: -99590011706.37186
[2026-01-13 04:45:51] 2026-01-13 03:45:14,045 | INFO     | chi2: 13.926412456407656
[2026-01-13 04:45:51] 2026-01-13 03:45:14,045 | INFO     | current memory leak: 56.32 B/s (using 104 data points, chi2=13.93)
[2026-01-13 04:45:51] 2026-01-13 03:45:14,046 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-01-13 04:45:51] 2026-01-13 03:45:14,046 | INFO     | ..............................
[2026-01-13 04:45:51] 2026-01-13 03:45:14,046 | INFO     | . Timing measurements:
[2026-01-13 04:45:51] 2026-01-13 03:45:14,046 | INFO     | . get job = 0 s
[2026-01-13 04:45:51] 2026-01-13 03:45:14,046 | INFO     | . initial setup = 8 s
[2026-01-13 04:45:51] 2026-01-13 03:45:14,046 | INFO     | . payload setup = 178 s
[2026-01-13 04:45:51] 2026-01-13 03:45:14,046 | INFO     | . stage-in = 0 s
[2026-01-13 04:45:51] 2026-01-13 03:45:14,046 | INFO     | . payload execution = 7469 s
[2026-01-13 04:45:51] 2026-01-13 03:45:14,047 | INFO     | . stage-out = 2 s
[2026-01-13 04:45:51] 2026-01-13 03:45:14,047 | INFO     | . log creation = 0 s
[2026-01-13 04:45:51] 2026-01-13 03:45:14,047 | INFO     | ..............................
[2026-01-13 04:45:51] 2026-01-13 03:45:14,194 | INFO     | 
[2026-01-13 04:45:51] 2026-01-13 03:45:14,195 | INFO     | job summary report
[2026-01-13 04:45:51] 2026-01-13 03:45:14,195 | INFO     | --------------------------------------------------
[2026-01-13 04:45:51] 2026-01-13 03:45:14,195 | INFO     | PanDA job id: 6967339937
[2026-01-13 04:45:51] 2026-01-13 03:45:14,195 | INFO     | task id: 47962010
[2026-01-13 04:45:51] 2026-01-13 03:45:14,195 | INFO     | errors: (none)
[2026-01-13 04:45:51] 2026-01-13 03:45:14,195 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 04:45:51] 2026-01-13 03:45:14,195 | INFO     | pilot state: finished 
[2026-01-13 04:45:51] 2026-01-13 03:45:14,195 | INFO     | transexitcode: 0
[2026-01-13 04:45:51] 2026-01-13 03:45:14,196 | INFO     | exeerrorcode: 0
[2026-01-13 04:45:51] 2026-01-13 03:45:14,196 | INFO     | exeerrordiag: 
[2026-01-13 04:45:51] 2026-01-13 03:45:14,196 | INFO     | exitcode: 0
[2026-01-13 04:45:51] 2026-01-13 03:45:14,196 | INFO     | exitmsg: OK
[2026-01-13 04:45:51] 2026-01-13 03:45:14,196 | INFO     | cpuconsumptiontime: 19243 s
[2026-01-13 04:45:51] 2026-01-13 03:45:14,196 | INFO     | nevents: 50
[2026-01-13 04:45:51] 2026-01-13 03:45:14,196 | INFO     | neventsw: 0
[2026-01-13 04:45:51] 2026-01-13 03:45:14,196 | INFO     | pid: 15940
[2026-01-13 04:45:51] 2026-01-13 03:45:14,196 | INFO     | pgrp: 15940
[2026-01-13 04:45:51] 2026-01-13 03:45:14,196 | INFO     | corecount: 8
[2026-01-13 04:45:51] 2026-01-13 03:45:14,196 | INFO     | event service: False
[2026-01-13 04:45:51] 2026-01-13 03:45:14,197 | INFO     | sizes: {0: 2284399, 1: 2284598, 12: 2284598, 22: 2284626, 33: 2284654, 44: 2284710, 55: 2284866, 65: 2284894, 76: 2284922, 87: 2284978, 97: 2285006, 106: 2285576, 
[2026-01-13 04:45:51] 2026-01-13 03:45:14,197 | INFO     | --------------------------------------------------
[2026-01-13 04:45:51] 2026-01-13 03:45:14,197 | INFO     | 
[2026-01-13 04:45:51] 2026-01-13 03:45:14,197 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-01-13 04:45:51] 2026-01-13 03:45:14,747 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 04:45:51] 2026-01-13 03:45:14,747 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 04:45:51] 2026-01-13 03:45:14,747 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 04:45:51] 2026-01-13 03:45:14,748 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 04:45:51] 2026-01-13 03:45:14,748 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 04:45:51] 2026-01-13 03:45:14,748 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 04:45:51] 2026-01-13 03:45:14,748 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 04:45:51] 2026-01-13 03:45:14,748 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 04:45:51] 2026-01-13 03:45:14,748 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 04:45:51] 2026-01-13 03:45:14,748 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 04:45:51] 2026-01-13 03:45:14,748 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 04:45:51] 2026-01-13 03:45:14,748 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 04:45:51] 2026-01-13 03:45:14,749 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 04:45:51] 2026-01-13 03:45:14,749 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 04:45:51] 2026-01-13 03:45:14,749 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 04:45:51] 2026-01-13 03:45:14,749 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 04:45:51] 2026-01-13 03:45:14,749 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 04:45:51] 2026-01-13 03:45:14,749 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 04:45:51] 2026-01-13 03:45:14,749 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 04:45:51] 2026-01-13 03:45:14,749 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 04:45:51] 2026-01-13 03:45:14,749 | INFO     | job 6967339937 has completed (purged errors)
[2026-01-13 04:45:51] 2026-01-13 03:45:14,750 | INFO     | overall cleanup function is called
[2026-01-13 04:45:51] 2026-01-13 03:45:15,764 | INFO     | --- collectZombieJob: --- 10, [15940]
[2026-01-13 04:45:51] 2026-01-13 03:45:15,765 | INFO     | zombie collector waiting for pid 15940
[2026-01-13 04:45:51] 2026-01-13 03:45:15,765 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 04:45:51] 2026-01-13 03:45:15,765 | INFO     | collected zombie processes
[2026-01-13 04:45:51] 2026-01-13 03:45:15,765 | INFO     | will attempt to kill all subprocesses of pid=15940
[2026-01-13 04:45:51] 2026-01-13 03:45:15,856 | INFO     | process IDs to be killed: [15940] (in reverse order)
[2026-01-13 04:45:51] 2026-01-13 03:45:16,802 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 04:45:51] 2026-01-13 03:45:16,802 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 04:45:51] 2026-01-13 03:45:16,804 | INFO     | did not find any defunct processes belonging to 15940
[2026-01-13 04:45:51] 2026-01-13 03:45:16,806 | INFO     | did not find any defunct processes belonging to 15940
[2026-01-13 04:45:51] 2026-01-13 03:45:16,806 | INFO     | ready for new job
[2026-01-13 04:45:51] 2026-01-13 03:45:16,806 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 04:45:51] 2026-01-13 03:45:16,808 | INFO     | ***************************************
[2026-01-13 04:45:51] 2026-01-13 03:45:16,808 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 04:45:51] 2026-01-13 03:45:16,808 | INFO     | ***************************************
[2026-01-13 04:45:51] 2026-01-13 03:45:16,808 | INFO     | 
[2026-01-13 04:45:51] 2026-01-13 03:45:16,809 | INFO     | pilot is running in a VM
[2026-01-13 04:45:51] 2026-01-13 03:45:16,809 | INFO     | architecture information:
[2026-01-13 04:45:51] 2026-01-13 03:45:16,817 | INFO     | executing command: cat /etc/os-release
[2026-01-13 04:45:51] 2026-01-13 03:45:17,126 | INFO     | cat /etc/os-release:
[2026-01-13 04:45:51] NAME="CentOS Linux"
[2026-01-13 04:45:51] VERSION="7 (Core)"
[2026-01-13 04:45:51] ID="centos"
[2026-01-13 04:45:51] ID_LIKE="rhel fedora"
[2026-01-13 04:45:51] VERSION_ID="7"
[2026-01-13 04:45:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 04:45:51] ANSI_COLOR="0;31"
[2026-01-13 04:45:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 04:45:51] HOME_URL="https://www.centos.org/"
[2026-01-13 04:45:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 04:45:51] 
[2026-01-13 04:45:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 04:45:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 04:45:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 04:45:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 04:45:51] 
[2026-01-13 04:45:51] 2026-01-13 03:45:17,126 | INFO     | ***************************************
[2026-01-13 04:45:51] 2026-01-13 03:45:17,630 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-01-13 04:45:51] 2026-01-13 03:45:17,942 | INFO     | sufficient remaining disk space (495673409536 B)
[2026-01-13 04:45:51] 2026-01-13 03:45:17,942 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 04:45:51] 2026-01-13 03:45:17,943 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 04:45:51] 2026-01-13 03:45:17,943 | INFO     | update_server=False
[2026-01-13 04:45:51] 2026-01-13 03:45:17,943 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 04:45:51] 2026-01-13 03:45:17,996 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 04:45:51] 2026-01-13 03:45:17,997 | INFO     | aborting loop
[2026-01-13 04:45:51] 2026-01-13 03:45:18,142 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 04:45:51] 2026-01-13 03:45:18,490 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 04:45:51] 2026-01-13 03:45:18,772 | INFO     | all data control threads have been joined
[2026-01-13 04:45:51] 2026-01-13 03:45:18,949 | INFO     | [job] retrieve thread has finished
[2026-01-13 04:45:51] 2026-01-13 03:45:18,967 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 04:45:51] 2026-01-13 03:45:18,971 | INFO     | [job] validate thread has finished
[2026-01-13 04:45:51] 2026-01-13 03:45:19,003 | INFO     | [job] job monitor thread has finished
[2026-01-13 04:45:51] 2026-01-13 03:45:19,025 | INFO     | [data] copytool_in thread has finished
[2026-01-13 04:45:51] 2026-01-13 03:45:19,213 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 04:45:51] 2026-01-13 03:45:19,255 | INFO     | all payload control threads have been joined
[2026-01-13 04:45:51] 2026-01-13 03:45:19,308 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 04:45:51] 2026-01-13 03:45:19,346 | INFO     | [payload] validate_post thread has finished
[2026-01-13 04:45:51] 2026-01-13 03:45:19,349 | INFO     | all job control threads have been joined
[2026-01-13 04:45:51] 2026-01-13 03:45:19,428 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 04:45:51] 2026-01-13 03:45:19,449 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 04:45:51] 2026-01-13 03:45:19,451 | INFO     | [payload] failed_post thread has finished
[2026-01-13 04:45:51] 2026-01-13 03:45:19,778 | INFO     | [data] control thread has finished
[2026-01-13 04:45:51] 2026-01-13 03:45:20,149 | INFO     | [data] copytool_out thread has finished
[2026-01-13 04:45:51] 2026-01-13 03:45:20,219 | INFO     | [job] queue monitor thread has finished
[2026-01-13 04:45:51] 2026-01-13 03:45:20,261 | INFO     | [payload] control thread has finished
[2026-01-13 04:45:51] 2026-01-13 03:45:20,356 | INFO     | [job] control thread has finished
[2026-01-13 04:45:51] 2026-01-13 03:45:22,499 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 04:45:51] 2026-01-13 03:45:34,629 | INFO     | [monitor] cgroup control has ended
[2026-01-13 04:45:51] 2026-01-13 03:45:34,847 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140009157072704)>', '<ExcThread(monitor, started 140008711235328)>']
[2026-01-13 04:45:51] 2026-01-13 03:45:39,873 | INFO     | all workflow threads have been joined
[2026-01-13 04:45:51] 2026-01-13 03:45:39,874 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 04:45:51] 2026-01-13 03:45:39,874 | INFO     | traces error code: 0
[2026-01-13 04:45:51] 2026-01-13 03:45:39,874 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 04:45:51] 2026-01-13 03:45:46,842 | INFO     | PID=9434 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-13 04:45:51] 2026-01-13 03:45:46,842 | INFO     | .. there are 2 such processes running
[2026-01-13 04:45:51] 2026-01-13 03:45:46,843 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 04:45:51] 2026-01-13 03:45:46,843 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 04:45:51] 2026-01-13 03:45:46,843 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 04:45:51] 2026-01-13 03:45:46,843 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 04:45:51] 2026-01-13 03:45:46,843 | INFO     | [monitor] control thread has ended
[2026-01-13 04:45:51] 2026-01-13 03:45:47,097 [wrapper] ==== pilot stdout END ====
[2026-01-13 04:45:51] 2026-01-13 03:45:47,150 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 04:45:51] 2026-01-13 03:45:47,204 [wrapper] pilotpid: 9434
[2026-01-13 04:45:51] 2026-01-13 03:45:47,313 [wrapper] Pilot exit status: 0
[2026-01-13 04:45:51] 2026-01-13 03:45:47,682 [wrapper] pandaids: 6967339937
[2026-01-13 04:45:51] 2026-01-13 03:45:48,729 [wrapper] cleanup supervisor_pilot 30838 9435
[2026-01-13 04:45:51] 2026-01-13 03:45:48,823 [wrapper] Test setup, not cleaning
[2026-01-13 04:45:51] 2026-01-13 03:45:48,920 [wrapper] apfmon messages muted
[2026-01-13 04:45:51] 2026-01-13 03:45:49,023 [wrapper] ==== wrapper stdout END ====
[2026-01-13 04:45:51] 2026-01-13 03:45:49,154 [wrapper] ==== wrapper stderr END ====
[2026-01-13 04:45:51]  *** Error codes and diagnostics ***
[2026-01-13 04:45:51]     "exeErrorCode": 0,
[2026-01-13 04:45:51]     "exeErrorDiag": "",
[2026-01-13 04:45:51]     "pilotErrorCode": 0,
[2026-01-13 04:45:51]     "pilotErrorDiag": "",
[2026-01-13 04:45:51]  *** Listing of results directory ***
[2026-01-13 04:45:51] total 438472
[2026-01-13 04:45:51] -rw-r--r--. 1 boinc boinc      5112 Jan 12 18:19 queuedata.json
[2026-01-13 04:45:51] -rw-r--r--. 1 boinc boinc    579449 Jan 12 18:19 pilot3.tar.gz
[2026-01-13 04:45:51] -rwx------. 1 boinc boinc     36322 Jan 12 18:23 runpilot2-wrapper.sh
[2026-01-13 04:45:51] -rw-r--r--. 1 boinc boinc       100 Jan 13 02:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 04:45:51] -rwxr-xr-x. 1 boinc boinc      7986 Jan 13 02:27 run_atlas
[2026-01-13 04:45:51] -rw-r--r--. 1 boinc boinc       105 Jan 13 02:27 job.xml
[2026-01-13 04:45:51] -rw-r--r--. 2 boinc boinc 393996253 Jan 13 02:27 EVNT.47962006._000098.pool.root.1
[2026-01-13 04:45:51] -rw-r--r--. 2 boinc boinc     15847 Jan 13 02:27 start_atlas.sh
[2026-01-13 04:45:51] drwxrwx--x. 2 boinc boinc        68 Jan 13 02:27 shared
[2026-01-13 04:45:51] -rw-r--r--. 2 boinc boinc    592618 Jan 13 02:27 input.tar.gz
[2026-01-13 04:45:51] -rw-r--r--. 1 boinc boinc      6392 Jan 13 02:27 init_data.xml
[2026-01-13 04:45:51] -rw-r--r--. 1 boinc boinc         0 Jan 13 02:27 boinc_lockfile
[2026-01-13 04:45:51] -rw-r--r--. 1 boinc boinc      2890 Jan 13 02:28 pandaJob.out
[2026-01-13 04:45:51] -rw-------. 1 boinc boinc    987763 Jan 13 02:32 agis_schedconf.cvmfs.json
[2026-01-13 04:45:51] -rw-------. 1 boinc boinc   1516240 Jan 13 02:32 agis_ddmendpoints.agis.ALL.json
[2026-01-13 04:45:51] drwx------. 5 boinc boinc      4096 Jan 13 02:32 pilot3
[2026-01-13 04:45:51] -rw-r--r--. 1 boinc boinc       530 Jan 13 04:23 boinc_task_state.xml
[2026-01-13 04:45:51] -rw-------. 1 boinc boinc  46363475 Jan 13 04:43 HITS.47962010._003238.pool.root.1
[2026-01-13 04:45:51] -rw-------. 1 boinc boinc      1013 Jan 13 04:43 memory_monitor_summary.json
[2026-01-13 04:45:51] -rw-------. 1 boinc boinc   1257922 Jan 13 04:43 log.47962010._003238.job.log.tgz.1
[2026-01-13 04:45:51] -rw-------. 1 boinc boinc      7917 Jan 13 04:45 heartbeat.json
[2026-01-13 04:45:51] -rw-r--r--. 1 boinc boinc      8192 Jan 13 04:45 boinc_mmap_file
[2026-01-13 04:45:51] -rw-r--r--. 1 boinc boinc        27 Jan 13 04:45 wrapper_checkpoint.txt
[2026-01-13 04:45:51] -rw-------. 1 boinc boinc        95 Jan 13 04:45 pilot_heartbeat.json
[2026-01-13 04:45:51] -rw-------. 1 boinc boinc       819 Jan 13 04:45 pilotlog.txt
[2026-01-13 04:45:51] -rw-------. 1 boinc boinc   1111111 Jan 13 04:45 log.47962010._003238.job.log.1
[2026-01-13 04:45:51] -rw-------. 1 boinc boinc       353 Jan 13 04:45 output.list
[2026-01-13 04:45:51] -rw-r--r--. 1 boinc boinc       620 Jan 13 04:45 runtime_log
[2026-01-13 04:45:51] -rw-------. 1 boinc boinc   2385920 Jan 13 04:45 result.tar.gz
[2026-01-13 04:45:51] -rw-r--r--. 1 boinc boinc      8832 Jan 13 04:45 runtime_log.err
[2026-01-13 04:45:51] -rw-------. 1 boinc boinc       654 Jan 13 04:45 4wANDmLoaz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIlnKDmwVtVum.diag
[2026-01-13 04:45:51] -rw-r--r--. 1 boinc boinc     21313 Jan 13 04:45 stderr.txt
[2026-01-13 04:45:52] HITS file was successfully produced:
[2026-01-13 04:45:52] -rw-------. 1 boinc boinc 46363475 Jan 13 04:43 shared/HITS.pool.root.1
[2026-01-13 04:45:52]  *** Contents of shared directory: ***
[2026-01-13 04:45:52] total 432972
[2026-01-13 04:45:52] -rw-r--r--. 2 boinc boinc 393996253 Jan 13 02:27 ATLAS.root_0
[2026-01-13 04:45:52] -rw-r--r--. 2 boinc boinc     15847 Jan 13 02:27 start_atlas.sh
[2026-01-13 04:45:52] -rw-r--r--. 2 boinc boinc    592618 Jan 13 02:27 input.tar.gz
[2026-01-13 04:45:52] -rw-------. 1 boinc boinc  46363475 Jan 13 04:43 HITS.pool.root.1
[2026-01-13 04:45:52] -rw-------. 1 boinc boinc   2385920 Jan 13 04:45 result.tar.gz
04:45:53 (5692): run_atlas exited; CPU time 19267.735686
04:45:53 (5692): called boinc_finish(0)

</stderr_txt>
]]>

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