Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:19:46 (18869): wrapper (7.7.26015): starting
21:19:46 (18869): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 21:19:46] Arguments: --nthreads 8
[2026-01-12 21:19:46] Threads: 8
[2026-01-12 21:19:46] Checking for CVMFS
[2026-01-12 21:19:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 21:19:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 21:19:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 21:19:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 21:19:49] 2.11.2.0 26786 40205 100884 155065 0 61 20724975 25165825 96 130560 0 15998880 99.828 10199323 3223 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-12 21:19:49] CVMFS is ok
[2026-01-12 21:19:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 21:19:49] Checking for apptainer binary...
[2026-01-12 21:19:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 21:19:49] Running /usr/bin/apptainer --version
[2026-01-12 21:19:49] apptainer version 1.3.2-1.el7
[2026-01-12 21:19:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 21:20:10] cg-vwn410.simple-grid.lan
[2026-01-12 21:20:10] apptainer works
[2026-01-12 21:20:10] Set ATHENA_PROC_NUMBER=8
[2026-01-12 21:20:10] Set ATHENA_CORE_NUMBER=8
[2026-01-12 21:20:10] Starting ATLAS job with PandaID=6967339940
[2026-01-12 21:20:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 23:49:07]  *** The last 200 lines of the pilot log: ***
[2026-01-12 23:49:07] 2026-01-12 22:48:19,207 | INFO     | monitor loop #695: job 0:6967339940 is in state 'finished'
[2026-01-12 23:49:07] 2026-01-12 22:48:19,207 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 23:49:07] 2026-01-12 22:48:19,520 | INFO     | time since job start (8630s) is within the limit (349056.0s)
[2026-01-12 23:49:07] 2026-01-12 22:48:21,531 | INFO     | time since job start (8632s) is within the limit (349056.0s)
[2026-01-12 23:49:07] 2026-01-12 22:48:21,714 | INFO     | monitor loop #696: job 0:6967339940 is in state 'finished'
[2026-01-12 23:49:07] 2026-01-12 22:48:21,714 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 23:49:07] 2026-01-12 22:48:23,540 | INFO     | time since job start (8634s) is within the limit (349056.0s)
[2026-01-12 23:49:07] 2026-01-12 22:48:24,224 | INFO     | monitor loop #697: job 0:6967339940 is in state 'finished'
[2026-01-12 23:49:07] 2026-01-12 22:48:24,224 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 23:49:07] 2026-01-12 22:48:25,546 | INFO     | time since job start (8636s) is within the limit (349056.0s)
[2026-01-12 23:49:07] 2026-01-12 22:48:26,729 | INFO     | monitor loop #698: job 0:6967339940 is in state 'finished'
[2026-01-12 23:49:07] 2026-01-12 22:48:26,729 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 23:49:07] 2026-01-12 22:48:27,555 | INFO     | time since job start (8638s) is within the limit (349056.0s)
[2026-01-12 23:49:07] 2026-01-12 22:48:29,234 | INFO     | monitor loop #699: job 0:6967339940 is in state 'finished'
[2026-01-12 23:49:07] 2026-01-12 22:48:29,234 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 23:49:07] 2026-01-12 22:48:29,562 | INFO     | time since job start (8640s) is within the limit (349056.0s)
[2026-01-12 23:49:07] 2026-01-12 22:48:30,206 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 23:49:07] 2026-01-12 22:48:30,207 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-12 23:49:07] 2026-01-12 22:48:30,209 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6967339940/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 23:49:07] 2026-01-12 22:48:30,209 | INFO     | extracted standard info from prmon json
[2026-01-12 23:49:07] 2026-01-12 22:48:30,210 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 23:49:07] 2026-01-12 22:48:30,210 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 23:49:07] 2026-01-12 22:48:30,213 | INFO     | fitting pss+swap vs Time
[2026-01-12 23:49:07] 2026-01-12 22:48:30,214 | INFO     | sum of square deviations: 697066187.5419832
[2026-01-12 23:49:07] 2026-01-12 22:48:30,214 | INFO     | sum of deviations: 48241796363.145004
[2026-01-12 23:49:07] 2026-01-12 22:48:30,215 | INFO     | mean x: 1768254013.6564887
[2026-01-12 23:49:07] 2026-01-12 22:48:30,215 | INFO     | mean y: 1880220.358778626
[2026-01-12 23:49:07] 2026-01-12 22:48:30,215 | INFO     | intersect: -122373514784.71373
[2026-01-12 23:49:07] 2026-01-12 22:48:30,215 | INFO     | chi2: 37.41017595264035
[2026-01-12 23:49:07] 2026-01-12 22:48:30,216 | INFO     | sum of square deviations: 620281672.8015863
[2026-01-12 23:49:07] 2026-01-12 22:48:30,216 | INFO     | sum of deviations: 75699207465.02382
[2026-01-12 23:49:07] 2026-01-12 22:48:30,217 | INFO     | mean x: 1768253861.1825397
[2026-01-12 23:49:07] 2026-01-12 22:48:30,217 | INFO     | mean y: 1934743.738095238
[2026-01-12 23:49:07] 2026-01-12 22:48:30,217 | INFO     | intersect: -215795858029.8423
[2026-01-12 23:49:07] 2026-01-12 22:48:30,217 | INFO     | chi2: 32.42699830038795
[2026-01-12 23:49:07] 2026-01-12 22:48:30,217 | INFO     | current chi2=32.42699830038795 (change=13.320380151541885 %)
[2026-01-12 23:49:07] 2026-01-12 22:48:30,218 | INFO     | right removable region: 125
[2026-01-12 23:49:07] 2026-01-12 22:48:30,218 | INFO     | sum of square deviations: 620229212.8015863
[2026-01-12 23:49:07] 2026-01-12 22:48:30,219 | INFO     | sum of deviations: 10797550983.547625
[2026-01-12 23:49:07] 2026-01-12 22:48:30,219 | INFO     | mean x: 1768254166.1825397
[2026-01-12 23:49:07] 2026-01-12 22:48:30,219 | INFO     | mean y: 1954581.9761904762
[2026-01-12 23:49:07] 2026-01-12 22:48:30,219 | INFO     | intersect: -30781526939.28897
[2026-01-12 23:49:07] 2026-01-12 22:48:30,219 | INFO     | chi2: 29.80535935747812
[2026-01-12 23:49:07] 2026-01-12 22:48:30,220 | INFO     | current chi2=29.80535935747812 (change=20.328203226816136 %)
[2026-01-12 23:49:07] 2026-01-12 22:48:30,220 | INFO     | left removable region: 10
[2026-01-12 23:49:07] 2026-01-12 22:48:30,220 | INFO     | sum of square deviations: 471552595.68695694
[2026-01-12 23:49:07] 2026-01-12 22:48:30,221 | INFO     | sum of deviations: 10880328357.130432
[2026-01-12 23:49:07] 2026-01-12 22:48:30,221 | INFO     | mean x: 1768254135.747826
[2026-01-12 23:49:07] 2026-01-12 22:48:30,221 | INFO     | mean y: 2109970.5217391304
[2026-01-12 23:49:07] 2026-01-12 22:48:30,221 | INFO     | intersect: -40797550113.551445
[2026-01-12 23:49:07] 2026-01-12 22:48:30,222 | INFO     | chi2: 18.256352553500893
[2026-01-12 23:49:07] 2026-01-12 22:48:30,222 | INFO     | current memory leak: 23.07 B/s (using 115 data points, chi2=18.26)
[2026-01-12 23:49:07] 2026-01-12 22:48:30,222 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-01-12 23:49:07] 2026-01-12 22:48:30,222 | INFO     | ..............................
[2026-01-12 23:49:07] 2026-01-12 22:48:30,223 | INFO     | . Timing measurements:
[2026-01-12 23:49:07] 2026-01-12 22:48:30,223 | INFO     | . get job = 0 s
[2026-01-12 23:49:07] 2026-01-12 22:48:30,223 | INFO     | . initial setup = 10 s
[2026-01-12 23:49:07] 2026-01-12 22:48:30,223 | INFO     | . payload setup = 177 s
[2026-01-12 23:49:07] 2026-01-12 22:48:30,223 | INFO     | . stage-in = 0 s
[2026-01-12 23:49:07] 2026-01-12 22:48:30,223 | INFO     | . payload execution = 8125 s
[2026-01-12 23:49:07] 2026-01-12 22:48:30,223 | INFO     | . stage-out = 3 s
[2026-01-12 23:49:07] 2026-01-12 22:48:30,223 | INFO     | . log creation = 1 s
[2026-01-12 23:49:07] 2026-01-12 22:48:30,223 | INFO     | ..............................
[2026-01-12 23:49:07] 2026-01-12 22:48:30,369 | INFO     | 
[2026-01-12 23:49:07] 2026-01-12 22:48:30,369 | INFO     | job summary report
[2026-01-12 23:49:07] 2026-01-12 22:48:30,369 | INFO     | --------------------------------------------------
[2026-01-12 23:49:07] 2026-01-12 22:48:30,369 | INFO     | PanDA job id: 6967339940
[2026-01-12 23:49:07] 2026-01-12 22:48:30,370 | INFO     | task id: 47962010
[2026-01-12 23:49:07] 2026-01-12 22:48:30,370 | INFO     | errors: (none)
[2026-01-12 23:49:07] 2026-01-12 22:48:30,370 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 23:49:07] 2026-01-12 22:48:30,370 | INFO     | pilot state: finished 
[2026-01-12 23:49:07] 2026-01-12 22:48:30,370 | INFO     | transexitcode: 0
[2026-01-12 23:49:07] 2026-01-12 22:48:30,370 | INFO     | exeerrorcode: 0
[2026-01-12 23:49:07] 2026-01-12 22:48:30,370 | INFO     | exeerrordiag: 
[2026-01-12 23:49:07] 2026-01-12 22:48:30,370 | INFO     | exitcode: 0
[2026-01-12 23:49:07] 2026-01-12 22:48:30,370 | INFO     | exitmsg: OK
[2026-01-12 23:49:07] 2026-01-12 22:48:30,371 | INFO     | cpuconsumptiontime: 20782 s
[2026-01-12 23:49:07] 2026-01-12 22:48:30,371 | INFO     | nevents: 50
[2026-01-12 23:49:07] 2026-01-12 22:48:30,378 | INFO     | neventsw: 0
[2026-01-12 23:49:07] 2026-01-12 22:48:30,378 | INFO     | pid: 29093
[2026-01-12 23:49:07] 2026-01-12 22:48:30,378 | INFO     | pgrp: 29093
[2026-01-12 23:49:07] 2026-01-12 22:48:30,378 | INFO     | corecount: 8
[2026-01-12 23:49:07] 2026-01-12 22:48:30,378 | INFO     | event service: False
[2026-01-12 23:49:07] 2026-01-12 22:48:30,379 | INFO     | sizes: {0: 2283741, 1: 2284426, 2: 2284625, 13: 2284625, 23: 2284681, 34: 2284709, 45: 2284865, 56: 2284893, 66: 2284921, 77: 2284949, 88: 2285005, 99: 2285313, 10
[2026-01-12 23:49:07] 2026-01-12 22:48:30,379 | INFO     | --------------------------------------------------
[2026-01-12 23:49:07] 2026-01-12 22:48:30,379 | INFO     | 
[2026-01-12 23:49:07] 2026-01-12 22:48:30,379 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-12 23:49:07] 2026-01-12 22:48:30,944 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 23:49:07] 2026-01-12 22:48:30,945 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 23:49:07] 2026-01-12 22:48:30,945 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 23:49:07] 2026-01-12 22:48:30,945 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 23:49:07] 2026-01-12 22:48:30,945 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 23:49:07] 2026-01-12 22:48:30,945 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 23:49:07] 2026-01-12 22:48:30,945 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 23:49:07] 2026-01-12 22:48:30,946 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 23:49:07] 2026-01-12 22:48:30,946 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 23:49:07] 2026-01-12 22:48:30,946 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 23:49:07] 2026-01-12 22:48:30,946 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 23:49:07] 2026-01-12 22:48:30,946 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 23:49:07] 2026-01-12 22:48:30,946 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 23:49:07] 2026-01-12 22:48:30,946 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 23:49:07] 2026-01-12 22:48:30,947 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 23:49:07] 2026-01-12 22:48:30,947 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 23:49:07] 2026-01-12 22:48:30,947 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 23:49:07] 2026-01-12 22:48:30,947 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 23:49:07] 2026-01-12 22:48:30,947 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 23:49:07] 2026-01-12 22:48:30,947 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 23:49:07] 2026-01-12 22:48:30,947 | INFO     | job 6967339940 has completed (purged errors)
[2026-01-12 23:49:07] 2026-01-12 22:48:30,948 | INFO     | overall cleanup function is called
[2026-01-12 23:49:07] 2026-01-12 22:48:31,970 | INFO     | --- collectZombieJob: --- 10, [29093]
[2026-01-12 23:49:07] 2026-01-12 22:48:31,970 | INFO     | zombie collector waiting for pid 29093
[2026-01-12 23:49:07] 2026-01-12 22:48:31,970 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 23:49:07] 2026-01-12 22:48:31,971 | INFO     | collected zombie processes
[2026-01-12 23:49:07] 2026-01-12 22:48:31,971 | INFO     | will attempt to kill all subprocesses of pid=29093
[2026-01-12 23:49:07] 2026-01-12 22:48:32,065 | INFO     | process IDs to be killed: [29093] (in reverse order)
[2026-01-12 23:49:07] 2026-01-12 22:48:33,293 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 23:49:07] 2026-01-12 22:48:33,294 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 23:49:07] 2026-01-12 22:48:33,296 | INFO     | did not find any defunct processes belonging to 29093
[2026-01-12 23:49:07] 2026-01-12 22:48:33,298 | INFO     | did not find any defunct processes belonging to 29093
[2026-01-12 23:49:07] 2026-01-12 22:48:33,298 | INFO     | ready for new job
[2026-01-12 23:49:07] 2026-01-12 22:48:33,298 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 23:49:07] 2026-01-12 22:48:33,300 | INFO     | ***************************************
[2026-01-12 23:49:07] 2026-01-12 22:48:33,300 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 23:49:07] 2026-01-12 22:48:33,300 | INFO     | ***************************************
[2026-01-12 23:49:07] 2026-01-12 22:48:33,301 | INFO     | 
[2026-01-12 23:49:07] 2026-01-12 22:48:33,301 | INFO     | pilot is running in a VM
[2026-01-12 23:49:07] 2026-01-12 22:48:33,301 | INFO     | architecture information:
[2026-01-12 23:49:07] 2026-01-12 22:48:33,312 | INFO     | executing command: cat /etc/os-release
[2026-01-12 23:49:07] 2026-01-12 22:48:33,584 | INFO     | cat /etc/os-release:
[2026-01-12 23:49:07] NAME="CentOS Linux"
[2026-01-12 23:49:07] VERSION="7 (Core)"
[2026-01-12 23:49:07] ID="centos"
[2026-01-12 23:49:07] ID_LIKE="rhel fedora"
[2026-01-12 23:49:07] VERSION_ID="7"
[2026-01-12 23:49:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 23:49:07] ANSI_COLOR="0;31"
[2026-01-12 23:49:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 23:49:07] HOME_URL="https://www.centos.org/"
[2026-01-12 23:49:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 23:49:07] 
[2026-01-12 23:49:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 23:49:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 23:49:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 23:49:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 23:49:07] 
[2026-01-12 23:49:07] 2026-01-12 22:48:33,585 | INFO     | ***************************************
[2026-01-12 23:49:07] 2026-01-12 22:48:34,088 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-12 23:49:07] 2026-01-12 22:48:34,368 | INFO     | sufficient remaining disk space (496282632192 B)
[2026-01-12 23:49:07] 2026-01-12 22:48:34,368 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 23:49:07] 2026-01-12 22:48:34,368 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 23:49:07] 2026-01-12 22:48:34,368 | INFO     | update_server=False
[2026-01-12 23:49:07] 2026-01-12 22:48:34,368 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 23:49:07] 2026-01-12 22:48:34,465 | INFO     | all job control threads have been joined
[2026-01-12 23:49:07] 2026-01-12 22:48:35,062 | INFO     | all data control threads have been joined
[2026-01-12 23:49:07] 2026-01-12 22:48:35,268 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 23:49:07] 2026-01-12 22:48:35,268 | INFO     | aborting loop
[2026-01-12 23:49:07] 2026-01-12 22:48:35,295 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 23:49:07] 2026-01-12 22:48:35,335 | INFO     | all payload control threads have been joined
[2026-01-12 23:49:07] 2026-01-12 22:48:35,374 | INFO     | [job] retrieve thread has finished
[2026-01-12 23:49:07] 2026-01-12 22:48:35,383 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 23:49:07] 2026-01-12 22:48:35,466 | INFO     | [job] validate thread has finished
[2026-01-12 23:49:07] 2026-01-12 22:48:35,471 | INFO     | [job] control thread has finished
[2026-01-12 23:49:07] 2026-01-12 22:48:35,837 | INFO     | [data] copytool_in thread has finished
[2026-01-12 23:49:07] 2026-01-12 22:48:36,068 | INFO     | [data] control thread has finished
[2026-01-12 23:49:07] 2026-01-12 22:48:36,274 | INFO     | [job] job monitor thread has finished
[2026-01-12 23:49:07] 2026-01-12 22:48:36,299 | INFO     | [payload] validate_post thread has finished
[2026-01-12 23:49:07] 2026-01-12 22:48:36,341 | INFO     | [payload] control thread has finished
[2026-01-12 23:49:07] 2026-01-12 22:48:36,348 | INFO     | [payload] failed_post thread has finished
[2026-01-12 23:49:07] 2026-01-12 22:48:36,389 | INFO     | [job] queue monitor thread has finished
[2026-01-12 23:49:07] 2026-01-12 22:48:36,401 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 23:49:07] 2026-01-12 22:48:36,402 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 23:49:07] 2026-01-12 22:48:36,787 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 23:49:07] 2026-01-12 22:48:36,822 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 23:49:07] 2026-01-12 22:48:37,302 | INFO     | [data] copytool_out thread has finished
[2026-01-12 23:49:07] 2026-01-12 22:48:40,796 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 23:49:07] 2026-01-12 22:48:43,773 | INFO     | [monitor] cgroup control has ended
[2026-01-12 23:49:07] 2026-01-12 22:48:44,604 | INFO     | job.realtimelogging is not enabled
[2026-01-12 23:49:07] 2026-01-12 22:48:45,610 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 23:49:07] 2026-01-12 22:48:46,031 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139807348803392)>', '<ExcThread(monitor, started 139806680016640)>']
[2026-01-12 23:49:07] 2026-01-12 22:48:51,057 | INFO     | all workflow threads have been joined
[2026-01-12 23:49:07] 2026-01-12 22:48:51,057 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 23:49:07] 2026-01-12 22:48:51,058 | INFO     | traces error code: 0
[2026-01-12 23:49:07] 2026-01-12 22:48:51,058 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 23:49:07] 2026-01-12 22:49:02,713 | INFO     | PID=22610 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-12 23:49:07] 2026-01-12 22:49:02,714 | INFO     | .. there are 2 such processes running
[2026-01-12 23:49:07] 2026-01-12 22:49:02,720 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 23:49:07] 2026-01-12 22:49:02,720 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 23:49:07] 2026-01-12 22:49:02,720 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 23:49:07] 2026-01-12 22:49:02,720 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 23:49:07] 2026-01-12 22:49:02,721 | INFO     | [monitor] control thread has ended
[2026-01-12 23:49:07] 2026-01-12 22:49:03,116 [wrapper] ==== pilot stdout END ====
[2026-01-12 23:49:07] 2026-01-12 22:49:03,170 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 23:49:07] 2026-01-12 22:49:03,233 [wrapper] pilotpid: 22610
[2026-01-12 23:49:07] 2026-01-12 22:49:03,355 [wrapper] Pilot exit status: 0
[2026-01-12 23:49:07] 2026-01-12 22:49:03,765 [wrapper] pandaids: 6967339940
[2026-01-12 23:49:07] 2026-01-12 22:49:04,697 [wrapper] cleanup supervisor_pilot 13498 22611
[2026-01-12 23:49:07] 2026-01-12 22:49:04,835 [wrapper] Test setup, not cleaning
[2026-01-12 23:49:07] 2026-01-12 22:49:04,961 [wrapper] apfmon messages muted
[2026-01-12 23:49:07] 2026-01-12 22:49:05,067 [wrapper] ==== wrapper stdout END ====
[2026-01-12 23:49:07] 2026-01-12 22:49:05,155 [wrapper] ==== wrapper stderr END ====
[2026-01-12 23:49:07]  *** Error codes and diagnostics ***
[2026-01-12 23:49:07]     "exeErrorCode": 0,
[2026-01-12 23:49:07]     "exeErrorDiag": "",
[2026-01-12 23:49:07]     "pilotErrorCode": 0,
[2026-01-12 23:49:07]     "pilotErrorDiag": "",
[2026-01-12 23:49:07]  *** Listing of results directory ***
[2026-01-12 23:49:07] total 437452
[2026-01-12 23:49:07] -rw-r--r--. 1 boinc boinc      5112 Jan 12 18:19 queuedata.json
[2026-01-12 23:49:07] -rw-r--r--. 1 boinc boinc    579449 Jan 12 18:19 pilot3.tar.gz
[2026-01-12 23:49:07] -rwx------. 1 boinc boinc     36322 Jan 12 18:23 runpilot2-wrapper.sh
[2026-01-12 23:49:07] -rw-r--r--. 1 boinc boinc       100 Jan 12 21:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 23:49:07] -rwxr-xr-x. 1 boinc boinc      7986 Jan 12 21:19 run_atlas
[2026-01-12 23:49:07] -rw-r--r--. 1 boinc boinc       105 Jan 12 21:19 job.xml
[2026-01-12 23:49:07] -rw-r--r--. 2 boinc boinc 393996253 Jan 12 21:19 EVNT.47962006._000098.pool.root.1
[2026-01-12 23:49:07] -rw-r--r--. 2 boinc boinc     15847 Jan 12 21:19 start_atlas.sh
[2026-01-12 23:49:07] drwxrwx--x. 2 boinc boinc        68 Jan 12 21:19 shared
[2026-01-12 23:49:07] -rw-r--r--. 2 boinc boinc    592617 Jan 12 21:19 input.tar.gz
[2026-01-12 23:49:07] -rw-r--r--. 1 boinc boinc      6391 Jan 12 21:19 init_data.xml
[2026-01-12 23:49:07] -rw-r--r--. 1 boinc boinc         0 Jan 12 21:19 boinc_lockfile
[2026-01-12 23:49:07] -rw-r--r--. 1 boinc boinc      2890 Jan 12 21:20 pandaJob.out
[2026-01-12 23:49:07] -rw-------. 1 boinc boinc    988547 Jan 12 21:24 agis_schedconf.cvmfs.json
[2026-01-12 23:49:07] -rw-------. 1 boinc boinc   1516240 Jan 12 21:24 agis_ddmendpoints.agis.ALL.json
[2026-01-12 23:49:07] drwx------. 5 boinc boinc      4096 Jan 12 21:24 pilot3
[2026-01-12 23:49:07] -rw-r--r--. 1 boinc boinc       530 Jan 12 23:23 boinc_task_state.xml
[2026-01-12 23:49:07] -rw-------. 1 boinc boinc  45178267 Jan 12 23:45 HITS.47962010._003241.pool.root.1
[2026-01-12 23:49:07] -rw-------. 1 boinc boinc      1018 Jan 12 23:46 memory_monitor_summary.json
[2026-01-12 23:49:07] -rw-------. 1 boinc boinc   1254416 Jan 12 23:46 log.47962010._003241.job.log.tgz.1
[2026-01-12 23:49:07] -rw-------. 1 boinc boinc      8588 Jan 12 23:48 heartbeat.json
[2026-01-12 23:49:07] -rw-r--r--. 1 boinc boinc      8192 Jan 12 23:49 boinc_mmap_file
[2026-01-12 23:49:07] -rw-r--r--. 1 boinc boinc        27 Jan 12 23:49 wrapper_checkpoint.txt
[2026-01-12 23:49:07] -rw-------. 1 boinc boinc        95 Jan 12 23:49 pilot_heartbeat.json
[2026-01-12 23:49:07] -rw-------. 1 boinc boinc       820 Jan 12 23:49 pilotlog.txt
[2026-01-12 23:49:07] -rw-------. 1 boinc boinc   1186958 Jan 12 23:49 log.47962010._003241.job.log.1
[2026-01-12 23:49:07] -rw-------. 1 boinc boinc       353 Jan 12 23:49 output.list
[2026-01-12 23:49:07] -rw-r--r--. 1 boinc boinc       620 Jan 12 23:49 runtime_log
[2026-01-12 23:49:07] -rw-------. 1 boinc boinc   2457600 Jan 12 23:49 result.tar.gz
[2026-01-12 23:49:07] -rw-r--r--. 1 boinc boinc      8816 Jan 12 23:49 runtime_log.err
[2026-01-12 23:49:07] -rw-------. 1 boinc boinc       654 Jan 12 23:49 dDGNDmLoaz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLlnKDm0XnnVn.diag
[2026-01-12 23:49:07] -rw-r--r--. 1 boinc boinc     21294 Jan 12 23:49 stderr.txt
[2026-01-12 23:49:07] HITS file was successfully produced:
[2026-01-12 23:49:07] -rw-------. 1 boinc boinc 45178267 Jan 12 23:45 shared/HITS.pool.root.1
[2026-01-12 23:49:07]  *** Contents of shared directory: ***
[2026-01-12 23:49:07] total 431880
[2026-01-12 23:49:07] -rw-r--r--. 2 boinc boinc 393996253 Jan 12 21:19 ATLAS.root_0
[2026-01-12 23:49:07] -rw-r--r--. 2 boinc boinc     15847 Jan 12 21:19 start_atlas.sh
[2026-01-12 23:49:07] -rw-r--r--. 2 boinc boinc    592617 Jan 12 21:19 input.tar.gz
[2026-01-12 23:49:07] -rw-------. 1 boinc boinc  45178267 Jan 12 23:45 HITS.pool.root.1
[2026-01-12 23:49:07] -rw-------. 1 boinc boinc   2457600 Jan 12 23:49 result.tar.gz
23:49:09 (18869): run_atlas exited; CPU time 20817.702417
23:49:09 (18869): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN