Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:33:39 (488151): wrapper (7.7.26015): starting
18:33:39 (488151): wrapper: running run_atlas (--nthreads 4)
[2026-01-12 18:33:39] Arguments: --nthreads 4
[2026-01-12 18:33:39] Threads: 4
[2026-01-12 18:33:39] Checking for CVMFS
[2026-01-12 18:33:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 18:33:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 18:33:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 18:33:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 18:33:40] 2.9.2.0 488346 0 29972 155061 4 1 23050957 36864001 0 130560 0 0 0.000 1335 11410 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-12 18:33:40] CVMFS is ok
[2026-01-12 18:33:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 18:33:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 18:33:40] Further information can be found at the LHC@home message board.
[2026-01-12 18:33:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 18:33:40] Checking for apptainer binary...
[2026-01-12 18:33:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 18:33:40] Running /usr/bin/apptainer --version
[2026-01-12 18:33:40] apptainer version 1.4.1-1.1
[2026-01-12 18:33:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 18:33:40] magicA254
[2026-01-12 18:33:40] apptainer works
[2026-01-12 18:33:41] Set ATHENA_PROC_NUMBER=4
[2026-01-12 18:33:41] Set ATHENA_CORE_NUMBER=4
[2026-01-12 18:33:41] Starting ATLAS job with PandaID=6967123482
[2026-01-12 18:33:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 20:07:02]  *** The last 200 lines of the pilot log: ***
[2026-01-12 20:07:02]  lfn=log.48188648._000005.job.log.tgz.1
[2026-01-12 20:07:02]  mtime=0
[2026-01-12 20:07:02]  protocol_id=None
[2026-01-12 20:07:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-12 20:07:02]  replicas=None
[2026-01-12 20:07:02]  scope=mc23_13p6TeV
[2026-01-12 20:07:02]  status=None
[2026-01-12 20:07:02]  status_code=0
[2026-01-12 20:07:02]  storage_token=
[2026-01-12 20:07:02]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6967123482/log.48188648._000005.job.log.tgz.1
[2026-01-12 20:07:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/9c/log.48188648._000005.job.log.tgz.1
[2026-01-12 20:07:02]  workdir=None
[2026-01-12 20:07:02] ]
[2026-01-12 20:07:02] 2026-01-12 19:06:19,694 | INFO     | transferring file log.48188648._000005.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6967123482/log.48188648._000005.job.log.tgz.1 to /local/data/boinc/
[2026-01-12 20:07:02] 2026-01-12 19:06:19,694 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6967123482/log.48188648._000005.job.log.tgz.1 /local/data/boinc/slots/0/log.48188648._0000
[2026-01-12 20:07:02] 2026-01-12 19:06:19,711 | INFO     | adding to output.list: log.48188648._000005.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/9c/log.48188648._000005.job.log.tg
[2026-01-12 20:07:02] 2026-01-12 19:06:19,712 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-12 20:07:02] 2026-01-12 19:06:19,712 | INFO     | summary of transferred files:
[2026-01-12 20:07:02] 2026-01-12 19:06:19,712 | INFO     |  -- lfn=log.48188648._000005.job.log.tgz.1, status_code=0, status=transferred
[2026-01-12 20:07:02] 2026-01-12 19:06:19,712 | INFO     | stage-out finished correctly
[2026-01-12 20:07:02] 2026-01-12 19:06:19,751 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-12 20:07:02] 2026-01-12 19:06:19,788 | INFO     | job 6967123482 has state=finished
[2026-01-12 20:07:02] 2026-01-12 19:06:19,788 | INFO     | preparing for final server update for job 6967123482 in state='finished'
[2026-01-12 20:07:02] 2026-01-12 19:06:19,789 | INFO     | this job has now completed (state=finished)
[2026-01-12 20:07:02] 2026-01-12 19:06:19,789 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-12 20:07:02] 2026-01-12 19:06:19,789 | INFO     | log transfer has been attempted: DONE
[2026-01-12 20:07:02] 2026-01-12 19:06:19,789 | INFO     | job 6967123482 has finished - writing final server update
[2026-01-12 20:07:02] 2026-01-12 19:06:19,789 | INFO     | total number of processed events: 400 (read)
[2026-01-12 20:07:02] 2026-01-12 19:06:19,790 | INFO     | executing command: lscpu
[2026-01-12 20:07:02] 2026-01-12 19:06:19,793 | INFO     | time since job start (5550s) is within the limit (349056.0s)
[2026-01-12 20:07:02] 2026-01-12 19:06:19,808 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-12 20:07:02] 2026-01-12 19:06:21,800 | INFO     | time since job start (5552s) is within the limit (349056.0s)
[2026-01-12 20:07:02] 2026-01-12 19:06:21,800 | INFO     | 5553s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-12 20:07:02] 2026-01-12 19:06:22,762 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 20:07:02] 2026-01-12 19:06:22,763 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3439.0171250000003
[2026-01-12 20:07:02] 2026-01-12 19:06:22,765 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6967123482/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 20:07:02] 2026-01-12 19:06:22,765 | INFO     | extracted standard info from prmon json
[2026-01-12 20:07:02] 2026-01-12 19:06:22,765 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 20:07:02] 2026-01-12 19:06:22,765 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 20:07:02] 2026-01-12 19:06:22,765 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 20:07:02] 2026-01-12 19:06:22,765 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 20:07:02] 2026-01-12 19:06:22,766 | INFO     | fitting pss+swap vs Time
[2026-01-12 20:07:02] 2026-01-12 19:06:22,766 | INFO     | sum of square deviations: 183761585.0
[2026-01-12 20:07:02] 2026-01-12 19:06:22,767 | INFO     | sum of deviations: -19821520498.999992
[2026-01-12 20:07:02] 2026-01-12 19:06:22,767 | INFO     | mean x: 1768242087.5
[2026-01-12 20:07:02] 2026-01-12 19:06:22,767 | INFO     | mean y: 2609455.3333333335
[2026-01-12 20:07:02] 2026-01-12 19:06:22,767 | INFO     | intersect: 190734784433.9927
[2026-01-12 20:07:02] 2026-01-12 19:06:22,767 | INFO     | chi2: 0.14679466604082408
[2026-01-12 20:07:02] 2026-01-12 19:06:22,767 | INFO     | current memory leak: -107.87 B/s (using 84 data points, chi2=0.15)
[2026-01-12 20:07:02] 2026-01-12 19:06:22,767 | INFO     | could have reported an average CPU frequency of 3820 MHz (7 samples)
[2026-01-12 20:07:02] 2026-01-12 19:06:22,767 | INFO     | ..............................
[2026-01-12 20:07:02] 2026-01-12 19:06:22,767 | INFO     | . Timing measurements:
[2026-01-12 20:07:02] 2026-01-12 19:06:22,767 | INFO     | . get job = 0 s
[2026-01-12 20:07:02] 2026-01-12 19:06:22,767 | INFO     | . initial setup = 1 s
[2026-01-12 20:07:02] 2026-01-12 19:06:22,767 | INFO     | . payload setup = 3 s
[2026-01-12 20:07:02] 2026-01-12 19:06:22,767 | INFO     | . stage-in = 0 s
[2026-01-12 20:07:02] 2026-01-12 19:06:22,767 | INFO     | . payload execution = 5528 s
[2026-01-12 20:07:02] 2026-01-12 19:06:22,767 | INFO     | . stage-out = 0 s
[2026-01-12 20:07:02] 2026-01-12 19:06:22,767 | INFO     | . log creation = 0 s
[2026-01-12 20:07:02] 2026-01-12 19:06:22,767 | INFO     | ..............................
[2026-01-12 20:07:02] 2026-01-12 19:06:22,807 | INFO     | 
[2026-01-12 20:07:02] 2026-01-12 19:06:22,807 | INFO     | job summary report
[2026-01-12 20:07:02] 2026-01-12 19:06:22,807 | INFO     | --------------------------------------------------
[2026-01-12 20:07:02] 2026-01-12 19:06:22,807 | INFO     | PanDA job id: 6967123482
[2026-01-12 20:07:02] 2026-01-12 19:06:22,807 | INFO     | task id: 48188648
[2026-01-12 20:07:02] 2026-01-12 19:06:22,807 | INFO     | errors: (none)
[2026-01-12 20:07:02] 2026-01-12 19:06:22,807 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 20:07:02] 2026-01-12 19:06:22,807 | INFO     | pilot state: finished 
[2026-01-12 20:07:02] 2026-01-12 19:06:22,807 | INFO     | transexitcode: 0
[2026-01-12 20:07:02] 2026-01-12 19:06:22,807 | INFO     | exeerrorcode: 0
[2026-01-12 20:07:02] 2026-01-12 19:06:22,807 | INFO     | exeerrordiag: 
[2026-01-12 20:07:02] 2026-01-12 19:06:22,807 | INFO     | exitcode: 0
[2026-01-12 20:07:02] 2026-01-12 19:06:22,808 | INFO     | exitmsg: OK
[2026-01-12 20:07:02] 2026-01-12 19:06:22,808 | INFO     | cpuconsumptiontime: 21145 s
[2026-01-12 20:07:02] 2026-01-12 19:06:22,808 | INFO     | nevents: 400
[2026-01-12 20:07:02] 2026-01-12 19:06:22,808 | INFO     | neventsw: 0
[2026-01-12 20:07:02] 2026-01-12 19:06:22,808 | INFO     | pid: 499079
[2026-01-12 20:07:02] 2026-01-12 19:06:22,808 | INFO     | pgrp: 499079
[2026-01-12 20:07:02] 2026-01-12 19:06:22,808 | INFO     | corecount: 4
[2026-01-12 20:07:02] 2026-01-12 19:06:22,808 | INFO     | event service: False
[2026-01-12 20:07:02] 2026-01-12 19:06:22,808 | INFO     | sizes: {0: 2284112, 3: 2284374, 11: 2284402, 5535: 2311160, 5536: 2320220, 5539: 2320358}
[2026-01-12 20:07:02] 2026-01-12 19:06:22,808 | INFO     | --------------------------------------------------
[2026-01-12 20:07:02] 2026-01-12 19:06:22,808 | INFO     | 
[2026-01-12 20:07:02] 2026-01-12 19:06:22,808 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-12 20:07:02] 2026-01-12 19:06:22,824 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 20:07:02] 2026-01-12 19:06:22,825 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 20:07:02] 2026-01-12 19:06:22,825 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 20:07:02] 2026-01-12 19:06:22,825 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 20:07:02] 2026-01-12 19:06:22,825 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 20:07:02] 2026-01-12 19:06:22,825 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 20:07:02] 2026-01-12 19:06:22,825 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 20:07:02] 2026-01-12 19:06:22,825 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 20:07:02] 2026-01-12 19:06:22,825 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 20:07:02] 2026-01-12 19:06:22,825 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 20:07:02] 2026-01-12 19:06:22,825 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 20:07:02] 2026-01-12 19:06:22,825 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 20:07:02] 2026-01-12 19:06:22,825 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 20:07:02] 2026-01-12 19:06:22,825 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 20:07:02] 2026-01-12 19:06:22,825 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 20:07:02] 2026-01-12 19:06:22,825 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 20:07:02] 2026-01-12 19:06:22,825 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 20:07:02] 2026-01-12 19:06:22,826 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 20:07:02] 2026-01-12 19:06:22,826 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 20:07:02] 2026-01-12 19:06:22,826 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 20:07:02] 2026-01-12 19:06:22,826 | INFO     | job 6967123482 has completed (purged errors)
[2026-01-12 20:07:02] 2026-01-12 19:06:22,826 | INFO     | overall cleanup function is called
[2026-01-12 20:07:02] 2026-01-12 19:06:22,879 | INFO     | PID=492493 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-12 20:07:02] 2026-01-12 19:06:23,832 | INFO     | --- collectZombieJob: --- 10, [499079]
[2026-01-12 20:07:02] 2026-01-12 19:06:23,832 | INFO     | zombie collector waiting for pid 499079
[2026-01-12 20:07:02] 2026-01-12 19:06:23,832 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 20:07:02] 2026-01-12 19:06:23,832 | INFO     | collected zombie processes
[2026-01-12 20:07:02] 2026-01-12 19:06:23,832 | INFO     | will attempt to kill all subprocesses of pid=499079
[2026-01-12 20:07:02] 2026-01-12 19:06:23,880 | INFO     | process IDs to be killed: [499079] (in reverse order)
[2026-01-12 20:07:02] 2026-01-12 19:06:23,913 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 20:07:02] 2026-01-12 19:06:23,913 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 20:07:02] 2026-01-12 19:06:23,916 | INFO     | did not find any defunct processes belonging to 499079
[2026-01-12 20:07:02] 2026-01-12 19:06:23,917 | INFO     | did not find any defunct processes belonging to 499079
[2026-01-12 20:07:02] 2026-01-12 19:06:23,918 | INFO     | ready for new job
[2026-01-12 20:07:02] 2026-01-12 19:06:23,918 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 20:07:02] 2026-01-12 19:06:23,918 | INFO     | ***************************************
[2026-01-12 20:07:02] 2026-01-12 19:06:23,918 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 20:07:02] 2026-01-12 19:06:23,918 | INFO     | ***************************************
[2026-01-12 20:07:02] 2026-01-12 19:06:23,918 | INFO     | 
[2026-01-12 20:07:02] 2026-01-12 19:06:23,919 | INFO     | architecture information:
[2026-01-12 20:07:02] 2026-01-12 19:06:23,919 | INFO     | executing command: cat /etc/os-release
[2026-01-12 20:07:02] 2026-01-12 19:06:23,932 | INFO     | cat /etc/os-release:
[2026-01-12 20:07:02] NAME="CentOS Linux"
[2026-01-12 20:07:02] VERSION="7 (Core)"
[2026-01-12 20:07:02] ID="centos"
[2026-01-12 20:07:02] ID_LIKE="rhel fedora"
[2026-01-12 20:07:02] VERSION_ID="7"
[2026-01-12 20:07:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 20:07:02] ANSI_COLOR="0;31"
[2026-01-12 20:07:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 20:07:02] HOME_URL="https://www.centos.org/"
[2026-01-12 20:07:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 20:07:02] 
[2026-01-12 20:07:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 20:07:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 20:07:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 20:07:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 20:07:02] 
[2026-01-12 20:07:02] 2026-01-12 19:06:23,932 | INFO     | ***************************************
[2026-01-12 20:07:02] 2026-01-12 19:06:24,012 | WARNING  | process 499079 can no longer be monitored (due to stat problems) - aborting
[2026-01-12 20:07:02] 2026-01-12 19:06:24,050 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 20:07:02] 2026-01-12 19:06:24,098 | INFO     | number of running child processes to parent process 499079: 1
[2026-01-12 20:07:02] 2026-01-12 19:06:24,098 | INFO     | maximum number of monitored processes: 6
[2026-01-12 20:07:02] 2026-01-12 19:06:24,098 | INFO     | aborting job monitoring since job object (job id=6967123482) has expired
[2026-01-12 20:07:02] 2026-01-12 19:06:24,435 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-12 20:07:02] 2026-01-12 19:06:24,449 | INFO     | sufficient remaining disk space (338421612544 B)
[2026-01-12 20:07:02] 2026-01-12 19:06:24,449 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 20:07:02] 2026-01-12 19:06:24,450 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 20:07:02] 2026-01-12 19:06:24,450 | INFO     | update_server=False
[2026-01-12 20:07:02] 2026-01-12 19:06:24,450 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 20:07:02] 2026-01-12 19:06:24,450 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 20:07:02] 2026-01-12 19:06:24,450 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 20:07:02] 2026-01-12 19:06:24,450 | INFO     | will abort loop
[2026-01-12 20:07:02] 2026-01-12 19:06:25,014 | INFO     | all data control threads have been joined
[2026-01-12 20:07:02] 2026-01-12 19:06:25,258 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 20:07:02] 2026-01-12 19:06:25,455 | INFO     | [job] retrieve thread has finished
[2026-01-12 20:07:02] 2026-01-12 19:06:25,455 | INFO     | [job] queue monitor thread has finished
[2026-01-12 20:07:02] 2026-01-12 19:06:25,455 | INFO     | [job] job monitor thread has finished
[2026-01-12 20:07:02] 2026-01-12 19:06:25,518 | INFO     | all job control threads have been joined
[2026-01-12 20:07:02] 2026-01-12 19:06:25,723 | INFO     | all payload control threads have been joined
[2026-01-12 20:07:02] 2026-01-12 19:06:25,792 | INFO     | [job] validate thread has finished
[2026-01-12 20:07:02] 2026-01-12 19:06:25,793 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 20:07:02] 2026-01-12 19:06:25,943 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 20:07:02] 2026-01-12 19:06:26,020 | INFO     | [data] control thread has finished
[2026-01-12 20:07:02] 2026-01-12 19:06:26,220 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 20:07:02] 2026-01-12 19:06:26,271 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 20:07:02] 2026-01-12 19:06:26,331 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 20:07:02] 2026-01-12 19:06:26,386 | INFO     | [payload] validate_post thread has finished
[2026-01-12 20:07:02] 2026-01-12 19:06:26,387 | INFO     | [data] copytool_in thread has finished
[2026-01-12 20:07:02] 2026-01-12 19:06:26,524 | INFO     | [job] control thread has finished
[2026-01-12 20:07:02] 2026-01-12 19:06:26,689 | INFO     | [payload] failed_post thread has finished
[2026-01-12 20:07:02] 2026-01-12 19:06:26,728 | INFO     | [payload] control thread has finished
[2026-01-12 20:07:02] 2026-01-12 19:06:27,264 | INFO     | [data] copytool_out thread has finished
[2026-01-12 20:07:02] 2026-01-12 19:06:29,799 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 20:07:02] 2026-01-12 19:06:54,998 | INFO     | PID=492493 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-12 20:07:02] 2026-01-12 19:06:54,998 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 20:07:02] 2026-01-12 19:06:54,998 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 20:07:02] 2026-01-12 19:06:54,998 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 20:07:02] 2026-01-12 19:06:56,450 | INFO     | [monitor] cgroup control has ended
[2026-01-12 20:07:02] 2026-01-12 19:06:57,125 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140105954322240)>', '<ExcThread(monitor, started 140105146672896)>']
[2026-01-12 20:07:02] 2026-01-12 19:06:58,007 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 20:07:02] 2026-01-12 19:06:58,007 | INFO     | [monitor] control thread has ended
[2026-01-12 20:07:02] 2026-01-12 19:07:02,140 | INFO     | all workflow threads have been joined
[2026-01-12 20:07:02] 2026-01-12 19:07:02,140 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 20:07:02] 2026-01-12 19:07:02,140 | INFO     | traces error code: 0
[2026-01-12 20:07:02] 2026-01-12 19:07:02,140 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 20:07:02] 2026-01-12 19:07:02,216 [wrapper] ==== pilot stdout END ====
[2026-01-12 20:07:02] 2026-01-12 19:07:02,220 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 20:07:02] 2026-01-12 19:07:02,223 [wrapper] pilotpid: 492493
[2026-01-12 20:07:02] 2026-01-12 19:07:02,226 [wrapper] Pilot exit status: 0
[2026-01-12 20:07:02] 2026-01-12 19:07:02,236 [wrapper] pandaids: 6967123482
[2026-01-12 20:07:02] 2026-01-12 19:07:02,258 [wrapper] cleanup supervisor_pilot  513992 492494
[2026-01-12 20:07:02] 2026-01-12 19:07:02,262 [wrapper] Test setup, not cleaning
[2026-01-12 20:07:02] 2026-01-12 19:07:02,265 [wrapper] apfmon messages muted
[2026-01-12 20:07:02] 2026-01-12 19:07:02,269 [wrapper] ==== wrapper stdout END ====
[2026-01-12 20:07:02] 2026-01-12 19:07:02,272 [wrapper] ==== wrapper stderr END ====
[2026-01-12 20:07:02]  *** Error codes and diagnostics ***
[2026-01-12 20:07:02]     "exeErrorCode": 0,
[2026-01-12 20:07:02]     "exeErrorDiag": "",
[2026-01-12 20:07:02]     "pilotErrorCode": 0,
[2026-01-12 20:07:02]     "pilotErrorDiag": "",
[2026-01-12 20:07:02]  *** Listing of results directory ***
[2026-01-12 20:07:02] total 565232
[2026-01-12 20:07:02] -rwx------ 1 boinc boinc     36322 Jan 12 16:06 runpilot2-wrapper.sh
[2026-01-12 20:07:02] -rw-r--r-- 1 boinc boinc      5112 Jan 12 16:06 queuedata.json
[2026-01-12 20:07:02] -rw-r--r-- 1 boinc boinc    579449 Jan 12 16:06 pilot3.tar.gz
[2026-01-12 20:07:02] -rw-r--r-- 1 boinc boinc       100 Jan 12 18:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 20:07:02] -rwxr-xr-x 1 boinc boinc      7986 Jan 12 18:33 run_atlas
[2026-01-12 20:07:02] -rw-r--r-- 1 boinc boinc       105 Jan 12 18:33 job.xml
[2026-01-12 20:07:02] -rw-r--r-- 2 boinc boinc 313553594 Jan 12 18:33 EVNT.48188646._000001.pool.root.1
[2026-01-12 20:07:02] -rw-r--r-- 2 boinc boinc    592391 Jan 12 18:33 input.tar.gz
[2026-01-12 20:07:02] -rw-r--r-- 2 boinc boinc     15847 Jan 12 18:33 start_atlas.sh
[2026-01-12 20:07:02] drwxrwx--x 2 boinc boinc      4096 Jan 12 18:33 shared
[2026-01-12 20:07:02] -rw-r--r-- 1 boinc boinc         0 Jan 12 18:33 boinc_setup_complete
[2026-01-12 20:07:02] -rw-r--r-- 1 boinc boinc      6378 Jan 12 18:33 init_data.xml
[2026-01-12 20:07:02] -rw-r--r-- 1 boinc boinc         0 Jan 12 18:33 boinc_lockfile
[2026-01-12 20:07:02] -rw-r--r-- 1 boinc boinc      2620 Jan 12 18:33 pandaJob.out
[2026-01-12 20:07:02] -rw------- 1 boinc boinc    988539 Jan 12 18:33 agis_schedconf.cvmfs.json
[2026-01-12 20:07:02] -rw------- 1 boinc boinc   1516240 Jan 12 18:33 agis_ddmendpoints.agis.ALL.json
[2026-01-12 20:07:02] drwx------ 5 boinc boinc      4096 Jan 12 18:33 pilot3
[2026-01-12 20:07:02] -rw-r--r-- 1 boinc boinc       529 Jan 12 20:05 boinc_task_state.xml
[2026-01-12 20:07:02] -rw------- 1 boinc boinc 259092723 Jan 12 20:05 HITS.48188648._000005.pool.root.1
[2026-01-12 20:07:02] -rw------- 1 boinc boinc      1021 Jan 12 20:06 memory_monitor_summary.json
[2026-01-12 20:07:02] -rw------- 1 boinc boinc    304332 Jan 12 20:06 log.48188648._000005.job.log.tgz.1
[2026-01-12 20:07:02] -rw------- 1 boinc boinc        95 Jan 12 20:06 pilot_heartbeat.json
[2026-01-12 20:07:02] -rw------- 1 boinc boinc      7758 Jan 12 20:06 heartbeat.json
[2026-01-12 20:07:02] -rw-r--r-- 1 boinc boinc      8192 Jan 12 20:06 boinc_mmap_file
[2026-01-12 20:07:02] -rw-r--r-- 1 boinc boinc        27 Jan 12 20:06 wrapper_checkpoint.txt
[2026-01-12 20:07:02] -rw------- 1 boinc boinc      5273 Jan 12 20:07 pilotlog.txt
[2026-01-12 20:07:02] -rw------- 1 boinc boinc    809385 Jan 12 20:07 log.48188648._000005.job.log.1
[2026-01-12 20:07:02] -rw------- 1 boinc boinc       357 Jan 12 20:07 output.list
[2026-01-12 20:07:02] -rw-r--r-- 1 boinc boinc       620 Jan 12 20:07 runtime_log
[2026-01-12 20:07:02] -rw------- 1 boinc boinc   1136640 Jan 12 20:07 result.tar.gz
[2026-01-12 20:07:02] -rw-r--r-- 1 boinc boinc      8912 Jan 12 20:07 runtime_log.err
[2026-01-12 20:07:02] -rw------- 1 boinc boinc       662 Jan 12 20:07 EdkLDmXgYz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxhnKDmlJdBem.diag
[2026-01-12 20:07:02] -rw-r--r-- 1 boinc boinc     21783 Jan 12 20:07 stderr.txt
[2026-01-12 20:07:02] HITS file was successfully produced:
[2026-01-12 20:07:02] -rw------- 1 boinc boinc 259092723 Jan 12 20:05 shared/HITS.pool.root.1
[2026-01-12 20:07:02]  *** Contents of shared directory: ***
[2026-01-12 20:07:02] total 560948
[2026-01-12 20:07:02] -rw-r--r-- 2 boinc boinc 313553594 Jan 12 18:33 ATLAS.root_0
[2026-01-12 20:07:02] -rw-r--r-- 2 boinc boinc    592391 Jan 12 18:33 input.tar.gz
[2026-01-12 20:07:02] -rw-r--r-- 2 boinc boinc     15847 Jan 12 18:33 start_atlas.sh
[2026-01-12 20:07:02] -rw------- 1 boinc boinc 259092723 Jan 12 20:05 HITS.pool.root.1
[2026-01-12 20:07:02] -rw------- 1 boinc boinc   1136640 Jan 12 20:07 result.tar.gz
20:07:03 (488151): run_atlas exited; CPU time 21163.433064
20:07:03 (488151): called boinc_finish(0)

</stderr_txt>
]]>

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