Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:54:18 (12953): wrapper (7.7.26015): starting
20:54:18 (12953): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 20:54:18] Arguments: --nthreads 8
[2026-01-12 20:54:18] Threads: 8
[2026-01-12 20:54:18] Checking for CVMFS
[2026-01-12 20:54:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 20:54:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 20:54:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 20:54:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 20:54:21] 2.11.2.0 27636 40164 128116 155064 2 85 25076835 25165825 96 130560 0 16129651 99.801 10443487 3257 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-12 20:54:21] CVMFS is ok
[2026-01-12 20:54:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 20:54:21] Checking for apptainer binary...
[2026-01-12 20:54:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 20:54:21] Running /usr/bin/apptainer --version
[2026-01-12 20:54:21] apptainer version 1.3.2-1.el7
[2026-01-12 20:54:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 20:54:51] cg-vwn429.simple-grid.lan
[2026-01-12 20:54:51] apptainer works
[2026-01-12 20:54:51] Set ATHENA_PROC_NUMBER=8
[2026-01-12 20:54:51] Set ATHENA_CORE_NUMBER=8
[2026-01-12 20:54:51] Starting ATLAS job with PandaID=6967339991
[2026-01-12 20:54:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 23:21:51]  *** The last 200 lines of the pilot log: ***
[2026-01-12 23:21:51] 2026-01-12 22:21:00,007 | INFO     | monitor loop #687: job 0:6967339991 is in state 'finished'
[2026-01-12 23:21:51] 2026-01-12 22:21:00,007 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 23:21:51] 2026-01-12 22:21:01,050 | INFO     | time since job start (8504s) is within the limit (349056.0s)
[2026-01-12 23:21:51] 2026-01-12 22:21:02,515 | INFO     | monitor loop #688: job 0:6967339991 is in state 'finished'
[2026-01-12 23:21:51] 2026-01-12 22:21:02,515 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 23:21:51] 2026-01-12 22:21:03,058 | INFO     | time since job start (8506s) is within the limit (349056.0s)
[2026-01-12 23:21:51] 2026-01-12 22:21:05,022 | INFO     | monitor loop #689: job 0:6967339991 is in state 'finished'
[2026-01-12 23:21:51] 2026-01-12 22:21:05,022 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 23:21:51] 2026-01-12 22:21:05,065 | INFO     | time since job start (8508s) is within the limit (349056.0s)
[2026-01-12 23:21:51] 2026-01-12 22:21:07,081 | INFO     | time since job start (8510s) is within the limit (349056.0s)
[2026-01-12 23:21:51] 2026-01-12 22:21:07,531 | INFO     | monitor loop #690: job 0:6967339991 is in state 'finished'
[2026-01-12 23:21:51] 2026-01-12 22:21:07,531 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 23:21:51] 2026-01-12 22:21:09,090 | INFO     | time since job start (8512s) is within the limit (349056.0s)
[2026-01-12 23:21:51] 2026-01-12 22:21:10,040 | INFO     | monitor loop #691: job 0:6967339991 is in state 'finished'
[2026-01-12 23:21:51] 2026-01-12 22:21:10,040 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 23:21:51] 2026-01-12 22:21:11,097 | INFO     | time since job start (8514s) is within the limit (349056.0s)
[2026-01-12 23:21:51] 2026-01-12 22:21:12,442 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 23:21:51] 2026-01-12 22:21:12,443 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-12 23:21:51] 2026-01-12 22:21:12,445 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6967339991/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 23:21:51] 2026-01-12 22:21:12,446 | INFO     | extracted standard info from prmon json
[2026-01-12 23:21:51] 2026-01-12 22:21:12,446 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 23:21:51] 2026-01-12 22:21:12,446 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 23:21:51] 2026-01-12 22:21:12,449 | INFO     | fitting pss+swap vs Time
[2026-01-12 23:21:51] 2026-01-12 22:21:12,450 | INFO     | sum of square deviations: 650268028.8671875
[2026-01-12 23:21:51] 2026-01-12 22:21:12,451 | INFO     | sum of deviations: 72787491255.44531
[2026-01-12 23:21:51] 2026-01-12 22:21:12,451 | INFO     | mean x: 1768252423.1796875
[2026-01-12 23:21:51] 2026-01-12 22:21:12,451 | INFO     | mean y: 1963084.6328125
[2026-01-12 23:21:51] 2026-01-12 22:21:12,451 | INFO     | intersect: -197926663383.1754
[2026-01-12 23:21:51] 2026-01-12 22:21:12,451 | INFO     | chi2: 33.16036724059511
[2026-01-12 23:21:51] 2026-01-12 22:21:12,452 | INFO     | sum of square deviations: 577028071.4634134
[2026-01-12 23:21:51] 2026-01-12 22:21:12,453 | INFO     | sum of deviations: 101727820171.68292
[2026-01-12 23:21:51] 2026-01-12 22:21:12,453 | INFO     | mean x: 1768252270.707317
[2026-01-12 23:21:51] 2026-01-12 22:21:12,453 | INFO     | mean y: 2023424.7967479674
[2026-01-12 23:21:51] 2026-01-12 22:21:12,453 | INFO     | intersect: -311734021853.7029
[2026-01-12 23:21:51] 2026-01-12 22:21:12,453 | INFO     | chi2: 28.321181454089082
[2026-01-12 23:21:51] 2026-01-12 22:21:12,453 | INFO     | current chi2=28.321181454089082 (change=14.593281646717916 %)
[2026-01-12 23:21:51] 2026-01-12 22:21:12,454 | INFO     | right removable region: 122
[2026-01-12 23:21:51] 2026-01-12 22:21:12,454 | INFO     | sum of square deviations: 576975001.4634134
[2026-01-12 23:21:51] 2026-01-12 22:21:12,455 | INFO     | sum of deviations: 34587024547.487816
[2026-01-12 23:21:51] 2026-01-12 22:21:12,455 | INFO     | mean x: 1768252575.707317
[2026-01-12 23:21:51] 2026-01-12 22:21:12,455 | INFO     | mean y: 2042618.569105691
[2026-01-12 23:21:51] 2026-01-12 22:21:12,455 | INFO     | intersect: -105996648983.36795
[2026-01-12 23:21:51] 2026-01-12 22:21:12,455 | INFO     | chi2: 25.754160969977484
[2026-01-12 23:21:51] 2026-01-12 22:21:12,456 | INFO     | current chi2=25.754160969977484 (change=22.33451221116425 %)
[2026-01-12 23:21:51] 2026-01-12 22:21:12,456 | INFO     | left removable region: 10
[2026-01-12 23:21:51] 2026-01-12 22:21:12,456 | INFO     | sum of square deviations: 435604628.41964203
[2026-01-12 23:21:51] 2026-01-12 22:21:12,457 | INFO     | sum of deviations: 35135885192.57143
[2026-01-12 23:21:51] 2026-01-12 22:21:12,457 | INFO     | mean x: 1768252545.2767856
[2026-01-12 23:21:51] 2026-01-12 22:21:12,457 | INFO     | mean y: 2212027.1428571427
[2026-01-12 23:21:51] 2026-01-12 22:21:12,457 | INFO     | intersect: -142625102672.70218
[2026-01-12 23:21:51] 2026-01-12 22:21:12,458 | INFO     | chi2: 14.491381836073092
[2026-01-12 23:21:51] 2026-01-12 22:21:12,458 | INFO     | current memory leak: 80.66 B/s (using 112 data points, chi2=14.49)
[2026-01-12 23:21:51] 2026-01-12 22:21:12,458 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-01-12 23:21:51] 2026-01-12 22:21:12,459 | INFO     | ..............................
[2026-01-12 23:21:51] 2026-01-12 22:21:12,459 | INFO     | . Timing measurements:
[2026-01-12 23:21:51] 2026-01-12 22:21:12,459 | INFO     | . get job = 0 s
[2026-01-12 23:21:51] 2026-01-12 22:21:12,459 | INFO     | . initial setup = 10 s
[2026-01-12 23:21:51] 2026-01-12 22:21:12,459 | INFO     | . payload setup = 191 s
[2026-01-12 23:21:51] 2026-01-12 22:21:12,459 | INFO     | . stage-in = 0 s
[2026-01-12 23:21:51] 2026-01-12 22:21:12,459 | INFO     | . payload execution = 7991 s
[2026-01-12 23:21:51] 2026-01-12 22:21:12,459 | INFO     | . stage-out = 3 s
[2026-01-12 23:21:51] 2026-01-12 22:21:12,459 | INFO     | . log creation = 1 s
[2026-01-12 23:21:51] 2026-01-12 22:21:12,459 | INFO     | ..............................
[2026-01-12 23:21:51] 2026-01-12 22:21:12,603 | INFO     | 
[2026-01-12 23:21:51] 2026-01-12 22:21:12,603 | INFO     | job summary report
[2026-01-12 23:21:51] 2026-01-12 22:21:12,603 | INFO     | --------------------------------------------------
[2026-01-12 23:21:51] 2026-01-12 22:21:12,603 | INFO     | PanDA job id: 6967339991
[2026-01-12 23:21:51] 2026-01-12 22:21:12,604 | INFO     | task id: 47962010
[2026-01-12 23:21:51] 2026-01-12 22:21:12,604 | INFO     | errors: (none)
[2026-01-12 23:21:51] 2026-01-12 22:21:12,604 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 23:21:51] 2026-01-12 22:21:12,604 | INFO     | pilot state: finished 
[2026-01-12 23:21:51] 2026-01-12 22:21:12,604 | INFO     | transexitcode: 0
[2026-01-12 23:21:51] 2026-01-12 22:21:12,604 | INFO     | exeerrorcode: 0
[2026-01-12 23:21:51] 2026-01-12 22:21:12,604 | INFO     | exeerrordiag: 
[2026-01-12 23:21:51] 2026-01-12 22:21:12,604 | INFO     | exitcode: 0
[2026-01-12 23:21:51] 2026-01-12 22:21:12,604 | INFO     | exitmsg: OK
[2026-01-12 23:21:51] 2026-01-12 22:21:12,604 | INFO     | cpuconsumptiontime: 21110 s
[2026-01-12 23:21:51] 2026-01-12 22:21:12,605 | INFO     | nevents: 50
[2026-01-12 23:21:51] 2026-01-12 22:21:12,605 | INFO     | neventsw: 0
[2026-01-12 23:21:51] 2026-01-12 22:21:12,605 | INFO     | pid: 23170
[2026-01-12 23:21:51] 2026-01-12 22:21:12,605 | INFO     | pgrp: 23170
[2026-01-12 23:21:51] 2026-01-12 22:21:12,605 | INFO     | corecount: 8
[2026-01-12 23:21:51] 2026-01-12 22:21:12,605 | INFO     | event service: False
[2026-01-12 23:21:51] 2026-01-12 22:21:12,605 | INFO     | sizes: {0: 2283741, 1: 2284427, 2: 2284626, 13: 2284626, 23: 2284682, 34: 2284710, 45: 2284866, 56: 2284894, 66: 2284922, 77: 2284950, 88: 2285006, 99: 2285314, 10
[2026-01-12 23:21:51] 2026-01-12 22:21:12,605 | INFO     | --------------------------------------------------
[2026-01-12 23:21:51] 2026-01-12 22:21:12,605 | INFO     | 
[2026-01-12 23:21:51] 2026-01-12 22:21:12,606 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-01-12 23:21:51] 2026-01-12 22:21:13,103 | INFO     | time since job start (8516s) is within the limit (349056.0s)
[2026-01-12 23:21:51] 2026-01-12 22:21:13,166 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 23:21:51] 2026-01-12 22:21:13,167 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 23:21:51] 2026-01-12 22:21:13,167 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 23:21:51] 2026-01-12 22:21:13,167 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 23:21:51] 2026-01-12 22:21:13,167 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 23:21:51] 2026-01-12 22:21:13,167 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 23:21:51] 2026-01-12 22:21:13,167 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 23:21:51] 2026-01-12 22:21:13,167 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 23:21:51] 2026-01-12 22:21:13,167 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 23:21:51] 2026-01-12 22:21:13,168 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 23:21:51] 2026-01-12 22:21:13,168 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 23:21:51] 2026-01-12 22:21:13,168 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 23:21:51] 2026-01-12 22:21:13,168 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 23:21:51] 2026-01-12 22:21:13,168 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 23:21:51] 2026-01-12 22:21:13,168 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 23:21:51] 2026-01-12 22:21:13,168 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 23:21:51] 2026-01-12 22:21:13,168 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 23:21:51] 2026-01-12 22:21:13,168 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 23:21:51] 2026-01-12 22:21:13,169 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 23:21:51] 2026-01-12 22:21:13,169 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 23:21:51] 2026-01-12 22:21:13,169 | INFO     | job 6967339991 has completed (purged errors)
[2026-01-12 23:21:51] 2026-01-12 22:21:13,169 | INFO     | overall cleanup function is called
[2026-01-12 23:21:51] 2026-01-12 22:21:14,185 | INFO     | --- collectZombieJob: --- 10, [23170]
[2026-01-12 23:21:51] 2026-01-12 22:21:14,185 | INFO     | zombie collector waiting for pid 23170
[2026-01-12 23:21:51] 2026-01-12 22:21:14,185 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 23:21:51] 2026-01-12 22:21:14,186 | INFO     | collected zombie processes
[2026-01-12 23:21:51] 2026-01-12 22:21:14,186 | INFO     | will attempt to kill all subprocesses of pid=23170
[2026-01-12 23:21:51] 2026-01-12 22:21:14,277 | INFO     | process IDs to be killed: [23170] (in reverse order)
[2026-01-12 23:21:51] 2026-01-12 22:21:15,035 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 23:21:51] 2026-01-12 22:21:15,035 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 23:21:51] 2026-01-12 22:21:15,037 | INFO     | did not find any defunct processes belonging to 23170
[2026-01-12 23:21:51] 2026-01-12 22:21:15,039 | INFO     | did not find any defunct processes belonging to 23170
[2026-01-12 23:21:51] 2026-01-12 22:21:15,039 | INFO     | ready for new job
[2026-01-12 23:21:51] 2026-01-12 22:21:15,039 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 23:21:51] 2026-01-12 22:21:15,041 | INFO     | ***************************************
[2026-01-12 23:21:51] 2026-01-12 22:21:15,041 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 23:21:51] 2026-01-12 22:21:15,041 | INFO     | ***************************************
[2026-01-12 23:21:51] 2026-01-12 22:21:15,041 | INFO     | 
[2026-01-12 23:21:51] 2026-01-12 22:21:15,042 | INFO     | pilot is running in a VM
[2026-01-12 23:21:51] 2026-01-12 22:21:15,042 | INFO     | architecture information:
[2026-01-12 23:21:51] 2026-01-12 22:21:15,057 | INFO     | executing command: cat /etc/os-release
[2026-01-12 23:21:51] 2026-01-12 22:21:15,376 | INFO     | cat /etc/os-release:
[2026-01-12 23:21:51] NAME="CentOS Linux"
[2026-01-12 23:21:51] VERSION="7 (Core)"
[2026-01-12 23:21:51] ID="centos"
[2026-01-12 23:21:51] ID_LIKE="rhel fedora"
[2026-01-12 23:21:51] VERSION_ID="7"
[2026-01-12 23:21:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 23:21:51] ANSI_COLOR="0;31"
[2026-01-12 23:21:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 23:21:51] HOME_URL="https://www.centos.org/"
[2026-01-12 23:21:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 23:21:51] 
[2026-01-12 23:21:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 23:21:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 23:21:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 23:21:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 23:21:51] 
[2026-01-12 23:21:51] 2026-01-12 22:21:15,377 | INFO     | ***************************************
[2026-01-12 23:21:51] 2026-01-12 22:21:15,887 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-01-12 23:21:51] 2026-01-12 22:21:16,092 | INFO     | sufficient remaining disk space (496691576832 B)
[2026-01-12 23:21:51] 2026-01-12 22:21:16,093 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 23:21:51] 2026-01-12 22:21:16,093 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 23:21:51] 2026-01-12 22:21:16,093 | INFO     | update_server=False
[2026-01-12 23:21:51] 2026-01-12 22:21:16,093 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 23:21:51] 2026-01-12 22:21:16,094 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 23:21:51] 2026-01-12 22:21:16,094 | INFO     | aborting loop
[2026-01-12 23:21:51] 2026-01-12 22:21:16,186 | INFO     | all data control threads have been joined
[2026-01-12 23:21:51] 2026-01-12 22:21:16,530 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 23:21:51] 2026-01-12 22:21:16,548 | INFO     | all job control threads have been joined
[2026-01-12 23:21:51] 2026-01-12 22:21:17,099 | INFO     | [job] retrieve thread has finished
[2026-01-12 23:21:51] 2026-01-12 22:21:17,100 | INFO     | [job] job monitor thread has finished
[2026-01-12 23:21:51] 2026-01-12 22:21:17,128 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 23:21:51] 2026-01-12 22:21:17,192 | INFO     | [data] control thread has finished
[2026-01-12 23:21:51] 2026-01-12 22:21:17,238 | INFO     | all payload control threads have been joined
[2026-01-12 23:21:51] 2026-01-12 22:21:17,325 | INFO     | [payload] validate_post thread has finished
[2026-01-12 23:21:51] 2026-01-12 22:21:17,384 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 23:21:51] 2026-01-12 22:21:17,433 | INFO     | [data] copytool_in thread has finished
[2026-01-12 23:21:51] 2026-01-12 22:21:17,509 | INFO     | [payload] failed_post thread has finished
[2026-01-12 23:21:51] 2026-01-12 22:21:17,554 | INFO     | [job] control thread has finished
[2026-01-12 23:21:51] 2026-01-12 22:21:17,617 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 23:21:51] 2026-01-12 22:21:17,960 | INFO     | [job] validate thread has finished
[2026-01-12 23:21:51] 2026-01-12 22:21:18,244 | INFO     | [payload] control thread has finished
[2026-01-12 23:21:51] 2026-01-12 22:21:18,304 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 23:21:51] 2026-01-12 22:21:18,414 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 23:21:51] 2026-01-12 22:21:18,537 | INFO     | [data] copytool_out thread has finished
[2026-01-12 23:21:51] 2026-01-12 22:21:18,578 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 23:21:51] 2026-01-12 22:21:18,623 | INFO     | [job] queue monitor thread has finished
[2026-01-12 23:21:51] 2026-01-12 22:21:21,137 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 23:21:51] 2026-01-12 22:21:31,100 | INFO     | [monitor] cgroup control has ended
[2026-01-12 23:21:51] 2026-01-12 22:21:31,378 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139811292469056)>', '<ExcThread(monitor, started 139810714941184)>']
[2026-01-12 23:21:51] 2026-01-12 22:21:36,404 | INFO     | all workflow threads have been joined
[2026-01-12 23:21:51] 2026-01-12 22:21:36,404 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 23:21:51] 2026-01-12 22:21:36,405 | INFO     | traces error code: 0
[2026-01-12 23:21:51] 2026-01-12 22:21:36,405 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 23:21:51] 2026-01-12 22:21:46,182 | INFO     | PID=16709 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-12 23:21:51] 2026-01-12 22:21:46,182 | INFO     | .. there are 2 such processes running
[2026-01-12 23:21:51] 2026-01-12 22:21:46,183 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 23:21:51] 2026-01-12 22:21:46,183 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 23:21:51] 2026-01-12 22:21:46,183 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 23:21:51] 2026-01-12 22:21:46,183 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 23:21:51] 2026-01-12 22:21:46,183 | INFO     | [monitor] control thread has ended
[2026-01-12 23:21:51] 2026-01-12 22:21:46,509 [wrapper] ==== pilot stdout END ====
[2026-01-12 23:21:51] 2026-01-12 22:21:46,608 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 23:21:51] 2026-01-12 22:21:46,693 [wrapper] pilotpid: 16709
[2026-01-12 23:21:51] 2026-01-12 22:21:46,749 [wrapper] Pilot exit status: 0
[2026-01-12 23:21:51] 2026-01-12 22:21:47,198 [wrapper] pandaids: 6967339991
[2026-01-12 23:21:51] 2026-01-12 22:21:48,093 [wrapper] cleanup supervisor_pilot  7604 16710
[2026-01-12 23:21:51] 2026-01-12 22:21:48,160 [wrapper] Test setup, not cleaning
[2026-01-12 23:21:51] 2026-01-12 22:21:48,267 [wrapper] apfmon messages muted
[2026-01-12 23:21:51] 2026-01-12 22:21:48,359 [wrapper] ==== wrapper stdout END ====
[2026-01-12 23:21:51] 2026-01-12 22:21:48,448 [wrapper] ==== wrapper stderr END ====
[2026-01-12 23:21:51]  *** Error codes and diagnostics ***
[2026-01-12 23:21:51]     "exeErrorCode": 0,
[2026-01-12 23:21:51]     "exeErrorDiag": "",
[2026-01-12 23:21:51]     "pilotErrorCode": 0,
[2026-01-12 23:21:51]     "pilotErrorDiag": "",
[2026-01-12 23:21:51]  *** Listing of results directory ***
[2026-01-12 23:21:51] total 438520
[2026-01-12 23:21:51] -rw-r--r--. 1 boinc boinc      5112 Jan 12 18:19 queuedata.json
[2026-01-12 23:21:51] -rw-r--r--. 1 boinc boinc    579449 Jan 12 18:19 pilot3.tar.gz
[2026-01-12 23:21:51] -rwx------. 1 boinc boinc     36322 Jan 12 18:23 runpilot2-wrapper.sh
[2026-01-12 23:21:51] -rw-r--r--. 1 boinc boinc       100 Jan 12 20:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 23:21:51] -rwxr-xr-x. 1 boinc boinc      7986 Jan 12 20:54 run_atlas
[2026-01-12 23:21:51] -rw-r--r--. 1 boinc boinc       105 Jan 12 20:54 job.xml
[2026-01-12 23:21:51] -rw-r--r--. 1 boinc boinc      6393 Jan 12 20:54 init_data.xml
[2026-01-12 23:21:51] -rw-r--r--. 2 boinc boinc 391877451 Jan 12 20:54 EVNT.47962006._000019.pool.root.1
[2026-01-12 23:21:51] -rw-r--r--. 2 boinc boinc     15847 Jan 12 20:54 start_atlas.sh
[2026-01-12 23:21:51] drwxrwx--x. 2 boinc boinc        68 Jan 12 20:54 shared
[2026-01-12 23:21:51] -rw-r--r--. 2 boinc boinc    592621 Jan 12 20:54 input.tar.gz
[2026-01-12 23:21:51] -rw-r--r--. 1 boinc boinc         0 Jan 12 20:54 boinc_lockfile
[2026-01-12 23:21:51] -rw-r--r--. 1 boinc boinc      2890 Jan 12 20:54 pandaJob.out
[2026-01-12 23:21:51] -rw-------. 1 boinc boinc    988547 Jan 12 20:59 agis_schedconf.cvmfs.json
[2026-01-12 23:21:51] -rw-------. 1 boinc boinc   1516240 Jan 12 20:59 agis_ddmendpoints.agis.ALL.json
[2026-01-12 23:21:51] drwx------. 5 boinc boinc      4096 Jan 12 20:59 pilot3
[2026-01-12 23:21:51] -rw-r--r--. 1 boinc boinc       529 Jan 12 22:56 boinc_task_state.xml
[2026-01-12 23:21:51] -rw-------. 1 boinc boinc  48394065 Jan 12 23:18 HITS.47962010._003292.pool.root.1
[2026-01-12 23:21:51] -rw-------. 1 boinc boinc      1011 Jan 12 23:19 memory_monitor_summary.json
[2026-01-12 23:21:51] -rw-------. 1 boinc boinc   1267633 Jan 12 23:19 log.47962010._003292.job.log.tgz.1
[2026-01-12 23:21:51] -rw-------. 1 boinc boinc      8591 Jan 12 23:21 heartbeat.json
[2026-01-12 23:21:51] -rw-------. 1 boinc boinc        95 Jan 12 23:21 pilot_heartbeat.json
[2026-01-12 23:21:51] -rw-------. 1 boinc boinc       820 Jan 12 23:21 pilotlog.txt
[2026-01-12 23:21:51] -rw-------. 1 boinc boinc   1169220 Jan 12 23:21 log.47962010._003292.job.log.1
[2026-01-12 23:21:51] -rw-------. 1 boinc boinc       353 Jan 12 23:21 output.list
[2026-01-12 23:21:51] -rw-r--r--. 1 boinc boinc        27 Jan 12 23:21 wrapper_checkpoint.txt
[2026-01-12 23:21:51] -rw-r--r--. 1 boinc boinc      8192 Jan 12 23:21 boinc_mmap_file
[2026-01-12 23:21:51] -rw-r--r--. 1 boinc boinc       620 Jan 12 23:21 runtime_log
[2026-01-12 23:21:51] -rw-------. 1 boinc boinc   2457600 Jan 12 23:21 result.tar.gz
[2026-01-12 23:21:51] -rw-r--r--. 1 boinc boinc      8832 Jan 12 23:21 runtime_log.err
[2026-01-12 23:21:51] -rw-------. 1 boinc boinc       654 Jan 12 23:21 e69NDmLoaz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvlnKDmoBN7Jn.diag
[2026-01-12 23:21:51] -rw-r--r--. 1 boinc boinc     21323 Jan 12 23:21 stderr.txt
[2026-01-12 23:21:51] HITS file was successfully produced:
[2026-01-12 23:21:51] -rw-------. 1 boinc boinc 48394065 Jan 12 23:18 shared/HITS.pool.root.1
[2026-01-12 23:21:51]  *** Contents of shared directory: ***
[2026-01-12 23:21:51] total 432952
[2026-01-12 23:21:51] -rw-r--r--. 2 boinc boinc 391877451 Jan 12 20:54 ATLAS.root_0
[2026-01-12 23:21:51] -rw-r--r--. 2 boinc boinc     15847 Jan 12 20:54 start_atlas.sh
[2026-01-12 23:21:51] -rw-r--r--. 2 boinc boinc    592621 Jan 12 20:54 input.tar.gz
[2026-01-12 23:21:51] -rw-------. 1 boinc boinc  48394065 Jan 12 23:18 HITS.pool.root.1
[2026-01-12 23:21:51] -rw-------. 1 boinc boinc   2457600 Jan 12 23:21 result.tar.gz
23:21:53 (12953): run_atlas exited; CPU time 21143.428009
23:21:53 (12953): called boinc_finish(0)

</stderr_txt>
]]>

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