Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:26:21 (15372): wrapper (7.7.26015): starting
18:26:21 (15372): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 18:26:22] Arguments: --nthreads 8
[2026-01-12 18:26:22] Threads: 8
[2026-01-12 18:26:22] Checking for CVMFS
[2026-01-12 18:26:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 18:26:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 18:26:27] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 18:26:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 18:26:29] 2.11.2.0 27636 40016 127592 155061 1 11 25055252 25165825 96 130560 0 16018767 99.800 10438991 3263 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-12 18:26:29] CVMFS is ok
[2026-01-12 18:26:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 18:26:29] Checking for apptainer binary...
[2026-01-12 18:26:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 18:26:29] Running /usr/bin/apptainer --version
[2026-01-12 18:26:29] apptainer version 1.3.2-1.el7
[2026-01-12 18:26:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 18:26:46] cg-vwn429.simple-grid.lan
[2026-01-12 18:26:46] apptainer works
[2026-01-12 18:26:46] Set ATHENA_PROC_NUMBER=8
[2026-01-12 18:26:46] Set ATHENA_CORE_NUMBER=8
[2026-01-12 18:26:46] Starting ATLAS job with PandaID=6967339969
[2026-01-12 18:26:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 20:54:13]  *** The last 200 lines of the pilot log: ***
[2026-01-12 20:54:13] 2026-01-12 19:52:52,981 | INFO     | time since job start (8524s) is within the limit (349056.0s)
[2026-01-12 20:54:13] 2026-01-12 19:52:54,996 | INFO     | time since job start (8526s) is within the limit (349056.0s)
[2026-01-12 20:54:13] 2026-01-12 19:52:55,214 | INFO     | monitor loop #687: job 0:6967339969 is in state 'finished'
[2026-01-12 20:54:13] 2026-01-12 19:52:55,214 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 20:54:13] 2026-01-12 19:52:57,008 | INFO     | time since job start (8529s) is within the limit (349056.0s)
[2026-01-12 20:54:13] 2026-01-12 19:52:57,729 | INFO     | monitor loop #688: job 0:6967339969 is in state 'finished'
[2026-01-12 20:54:13] 2026-01-12 19:52:57,729 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 20:54:13] 2026-01-12 19:52:59,021 | INFO     | time since job start (8531s) is within the limit (349056.0s)
[2026-01-12 20:54:13] 2026-01-12 19:53:00,235 | INFO     | monitor loop #689: job 0:6967339969 is in state 'finished'
[2026-01-12 20:54:13] 2026-01-12 19:53:00,235 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 20:54:13] 2026-01-12 19:53:01,034 | INFO     | time since job start (8533s) is within the limit (349056.0s)
[2026-01-12 20:54:13] 2026-01-12 19:53:02,740 | INFO     | monitor loop #690: job 0:6967339969 is in state 'finished'
[2026-01-12 20:54:13] 2026-01-12 19:53:02,740 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 20:54:13] 2026-01-12 19:53:03,041 | INFO     | time since job start (8535s) is within the limit (349056.0s)
[2026-01-12 20:54:13] 2026-01-12 19:53:05,048 | INFO     | time since job start (8537s) is within the limit (349056.0s)
[2026-01-12 20:54:13] 2026-01-12 19:53:05,158 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 20:54:13] 2026-01-12 19:53:05,159 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-12 20:54:13] 2026-01-12 19:53:05,161 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6967339969/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 20:54:13] 2026-01-12 19:53:05,162 | INFO     | extracted standard info from prmon json
[2026-01-12 20:54:13] 2026-01-12 19:53:05,162 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 20:54:13] 2026-01-12 19:53:05,162 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 20:54:13] 2026-01-12 19:53:05,166 | INFO     | fitting pss+swap vs Time
[2026-01-12 20:54:13] 2026-01-12 19:53:05,166 | INFO     | sum of square deviations: 665601659.8759687
[2026-01-12 20:54:13] 2026-01-12 19:53:05,167 | INFO     | sum of deviations: 20152932091.434048
[2026-01-12 20:54:13] 2026-01-12 19:53:05,167 | INFO     | mean x: 1768243530.635659
[2026-01-12 20:54:13] 2026-01-12 19:53:05,168 | INFO     | mean y: 1817959.7751937984
[2026-01-12 20:54:13] 2026-01-12 19:53:05,168 | INFO     | intersect: -53536647975.92945
[2026-01-12 20:54:13] 2026-01-12 19:53:05,168 | INFO     | chi2: 37.99492839514082
[2026-01-12 20:54:13] 2026-01-12 19:53:05,168 | INFO     | sum of square deviations: 591188062.774191
[2026-01-12 20:54:13] 2026-01-12 19:53:05,169 | INFO     | sum of deviations: 45813797888.61293
[2026-01-12 20:54:13] 2026-01-12 19:53:05,169 | INFO     | mean x: 1768243378.1612904
[2026-01-12 20:54:13] 2026-01-12 19:53:05,169 | INFO     | mean y: 1870743.6693548388
[2026-01-12 20:54:13] 2026-01-12 19:53:05,170 | INFO     | intersect: -137027189628.10936
[2026-01-12 20:54:13] 2026-01-12 19:53:05,170 | INFO     | chi2: 32.85697986728789
[2026-01-12 20:54:13] 2026-01-12 19:53:05,170 | INFO     | current chi2=32.85697986728789 (change=13.522721965466372 %)
[2026-01-12 20:54:13] 2026-01-12 19:53:05,170 | INFO     | right removable region: 123
[2026-01-12 20:54:13] 2026-01-12 19:53:05,170 | INFO     | sum of square deviations: 591138042.774191
[2026-01-12 20:54:13] 2026-01-12 19:53:05,171 | INFO     | sum of deviations: -14743040704.612894
[2026-01-12 20:54:13] 2026-01-12 19:53:05,172 | INFO     | mean x: 1768243683.1612904
[2026-01-12 20:54:13] 2026-01-12 19:53:05,172 | INFO     | mean y: 1889427.0806451612
[2026-01-12 20:54:13] 2026-01-12 19:53:05,172 | INFO     | intersect: 44102060132.01317
[2026-01-12 20:54:13] 2026-01-12 19:53:05,172 | INFO     | chi2: 30.748128093664747
[2026-01-12 20:54:13] 2026-01-12 19:53:05,172 | INFO     | current chi2=30.748128093664747 (change=19.073072664094997 %)
[2026-01-12 20:54:13] 2026-01-12 19:53:05,172 | INFO     | left removable region: 10
[2026-01-12 20:54:13] 2026-01-12 19:53:05,173 | INFO     | sum of square deviations: 447352436.49557495
[2026-01-12 20:54:13] 2026-01-12 19:53:05,173 | INFO     | sum of deviations: -11830682410.86724
[2026-01-12 20:54:13] 2026-01-12 19:53:05,174 | INFO     | mean x: 1768243652.7256637
[2026-01-12 20:54:13] 2026-01-12 19:53:05,174 | INFO     | mean y: 2035572.2300884956
[2026-01-12 20:54:13] 2026-01-12 19:53:05,174 | INFO     | intersect: 46765006719.33387
[2026-01-12 20:54:13] 2026-01-12 19:53:05,174 | INFO     | chi2: 19.88481903207813
[2026-01-12 20:54:13] 2026-01-12 19:53:05,174 | INFO     | current memory leak: -26.45 B/s (using 113 data points, chi2=19.88)
[2026-01-12 20:54:13] 2026-01-12 19:53:05,175 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-01-12 20:54:13] 2026-01-12 19:53:05,183 | INFO     | ..............................
[2026-01-12 20:54:13] 2026-01-12 19:53:05,183 | INFO     | . Timing measurements:
[2026-01-12 20:54:13] 2026-01-12 19:53:05,183 | INFO     | . get job = 0 s
[2026-01-12 20:54:13] 2026-01-12 19:53:05,184 | INFO     | . initial setup = 11 s
[2026-01-12 20:54:13] 2026-01-12 19:53:05,184 | INFO     | . payload setup = 189 s
[2026-01-12 20:54:13] 2026-01-12 19:53:05,184 | INFO     | . stage-in = 0 s
[2026-01-12 20:54:13] 2026-01-12 19:53:05,184 | INFO     | . payload execution = 8020 s
[2026-01-12 20:54:13] 2026-01-12 19:53:05,184 | INFO     | . stage-out = 3 s
[2026-01-12 20:54:13] 2026-01-12 19:53:05,184 | INFO     | . log creation = 1 s
[2026-01-12 20:54:13] 2026-01-12 19:53:05,184 | INFO     | ..............................
[2026-01-12 20:54:13] 2026-01-12 19:53:05,553 | INFO     | 
[2026-01-12 20:54:13] 2026-01-12 19:53:05,553 | INFO     | job summary report
[2026-01-12 20:54:13] 2026-01-12 19:53:05,553 | INFO     | --------------------------------------------------
[2026-01-12 20:54:13] 2026-01-12 19:53:05,553 | INFO     | PanDA job id: 6967339969
[2026-01-12 20:54:13] 2026-01-12 19:53:05,554 | INFO     | task id: 47962010
[2026-01-12 20:54:13] 2026-01-12 19:53:05,554 | INFO     | errors: (none)
[2026-01-12 20:54:13] 2026-01-12 19:53:05,554 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 20:54:13] 2026-01-12 19:53:05,554 | INFO     | pilot state: finished 
[2026-01-12 20:54:13] 2026-01-12 19:53:05,554 | INFO     | transexitcode: 0
[2026-01-12 20:54:13] 2026-01-12 19:53:05,554 | INFO     | exeerrorcode: 0
[2026-01-12 20:54:13] 2026-01-12 19:53:05,554 | INFO     | exeerrordiag: 
[2026-01-12 20:54:13] 2026-01-12 19:53:05,554 | INFO     | exitcode: 0
[2026-01-12 20:54:13] 2026-01-12 19:53:05,554 | INFO     | exitmsg: OK
[2026-01-12 20:54:13] 2026-01-12 19:53:05,554 | INFO     | cpuconsumptiontime: 19534 s
[2026-01-12 20:54:13] 2026-01-12 19:53:05,554 | INFO     | nevents: 50
[2026-01-12 20:54:13] 2026-01-12 19:53:05,555 | INFO     | neventsw: 0
[2026-01-12 20:54:13] 2026-01-12 19:53:05,555 | INFO     | pid: 25858
[2026-01-12 20:54:13] 2026-01-12 19:53:05,555 | INFO     | pgrp: 25858
[2026-01-12 20:54:13] 2026-01-12 19:53:05,555 | INFO     | corecount: 8
[2026-01-12 20:54:13] 2026-01-12 19:53:05,555 | INFO     | event service: False
[2026-01-12 20:54:13] 2026-01-12 19:53:05,555 | INFO     | sizes: {0: 2284343, 1: 2284598, 2: 2284598, 12: 2284626, 23: 2284654, 34: 2284682, 44: 2284838, 55: 2284866, 66: 2284894, 77: 2284922, 87: 2284978, 98: 2285286, 10
[2026-01-12 20:54:13] 2026-01-12 19:53:05,555 | INFO     | --------------------------------------------------
[2026-01-12 20:54:13] 2026-01-12 19:53:05,555 | INFO     | 
[2026-01-12 20:54:13] 2026-01-12 19:53:05,555 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-01-12 20:54:13] 2026-01-12 19:53:06,178 | INFO     | PID=19411 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-12 20:54:13] 2026-01-12 19:53:06,178 | INFO     | .. there are 2 such processes running
[2026-01-12 20:54:13] 2026-01-12 19:53:06,194 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 20:54:13] 2026-01-12 19:53:06,195 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 20:54:13] 2026-01-12 19:53:06,195 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 20:54:13] 2026-01-12 19:53:06,195 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 20:54:13] 2026-01-12 19:53:06,195 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 20:54:13] 2026-01-12 19:53:06,195 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 20:54:13] 2026-01-12 19:53:06,195 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 20:54:13] 2026-01-12 19:53:06,195 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 20:54:13] 2026-01-12 19:53:06,195 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 20:54:13] 2026-01-12 19:53:06,196 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 20:54:13] 2026-01-12 19:53:06,196 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 20:54:13] 2026-01-12 19:53:06,196 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 20:54:13] 2026-01-12 19:53:06,196 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 20:54:13] 2026-01-12 19:53:06,196 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 20:54:13] 2026-01-12 19:53:06,196 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 20:54:13] 2026-01-12 19:53:06,196 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 20:54:13] 2026-01-12 19:53:06,196 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 20:54:13] 2026-01-12 19:53:06,197 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 20:54:13] 2026-01-12 19:53:06,197 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 20:54:13] 2026-01-12 19:53:06,197 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 20:54:13] 2026-01-12 19:53:06,197 | INFO     | job 6967339969 has completed (purged errors)
[2026-01-12 20:54:13] 2026-01-12 19:53:06,197 | INFO     | overall cleanup function is called
[2026-01-12 20:54:13] 2026-01-12 19:53:07,220 | INFO     | --- collectZombieJob: --- 10, [25858]
[2026-01-12 20:54:13] 2026-01-12 19:53:07,220 | INFO     | zombie collector waiting for pid 25858
[2026-01-12 20:54:13] 2026-01-12 19:53:07,220 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 20:54:13] 2026-01-12 19:53:07,221 | INFO     | collected zombie processes
[2026-01-12 20:54:13] 2026-01-12 19:53:07,221 | INFO     | will attempt to kill all subprocesses of pid=25858
[2026-01-12 20:54:13] 2026-01-12 19:53:07,296 | INFO     | process IDs to be killed: [25858] (in reverse order)
[2026-01-12 20:54:13] 2026-01-12 19:53:08,121 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 20:54:13] 2026-01-12 19:53:08,122 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 20:54:13] 2026-01-12 19:53:08,124 | INFO     | did not find any defunct processes belonging to 25858
[2026-01-12 20:54:13] 2026-01-12 19:53:08,126 | INFO     | did not find any defunct processes belonging to 25858
[2026-01-12 20:54:13] 2026-01-12 19:53:08,126 | INFO     | ready for new job
[2026-01-12 20:54:13] 2026-01-12 19:53:08,126 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 20:54:13] 2026-01-12 19:53:08,128 | INFO     | ***************************************
[2026-01-12 20:54:13] 2026-01-12 19:53:08,128 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 20:54:13] 2026-01-12 19:53:08,128 | INFO     | ***************************************
[2026-01-12 20:54:13] 2026-01-12 19:53:08,128 | INFO     | 
[2026-01-12 20:54:13] 2026-01-12 19:53:08,129 | INFO     | pilot is running in a VM
[2026-01-12 20:54:13] 2026-01-12 19:53:08,129 | INFO     | architecture information:
[2026-01-12 20:54:13] 2026-01-12 19:53:08,144 | INFO     | executing command: cat /etc/os-release
[2026-01-12 20:54:13] 2026-01-12 19:53:08,409 | INFO     | cat /etc/os-release:
[2026-01-12 20:54:13] NAME="CentOS Linux"
[2026-01-12 20:54:13] VERSION="7 (Core)"
[2026-01-12 20:54:13] ID="centos"
[2026-01-12 20:54:13] ID_LIKE="rhel fedora"
[2026-01-12 20:54:13] VERSION_ID="7"
[2026-01-12 20:54:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 20:54:13] ANSI_COLOR="0;31"
[2026-01-12 20:54:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 20:54:13] HOME_URL="https://www.centos.org/"
[2026-01-12 20:54:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 20:54:13] 
[2026-01-12 20:54:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 20:54:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 20:54:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 20:54:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 20:54:13] 
[2026-01-12 20:54:13] 2026-01-12 19:53:08,409 | INFO     | ***************************************
[2026-01-12 20:54:13] 2026-01-12 19:53:08,912 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-01-12 20:54:13] 2026-01-12 19:53:09,181 | INFO     | sufficient remaining disk space (495915630592 B)
[2026-01-12 20:54:13] 2026-01-12 19:53:09,181 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 20:54:13] 2026-01-12 19:53:09,181 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 20:54:13] 2026-01-12 19:53:09,182 | INFO     | update_server=False
[2026-01-12 20:54:13] 2026-01-12 19:53:09,182 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 20:54:13] 2026-01-12 19:53:09,182 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 20:54:13] 2026-01-12 19:53:09,185 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 20:54:13] 2026-01-12 19:53:09,185 | INFO     | aborting loop
[2026-01-12 20:54:13] 2026-01-12 19:53:09,597 | INFO     | all data control threads have been joined
[2026-01-12 20:54:13] 2026-01-12 19:53:10,043 | INFO     | all payload control threads have been joined
[2026-01-12 20:54:13] 2026-01-12 19:53:10,188 | INFO     | [job] retrieve thread has finished
[2026-01-12 20:54:13] 2026-01-12 19:53:10,191 | INFO     | [job] job monitor thread has finished
[2026-01-12 20:54:13] 2026-01-12 19:53:10,308 | INFO     | [payload] failed_post thread has finished
[2026-01-12 20:54:13] 2026-01-12 19:53:10,366 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 20:54:13] 2026-01-12 19:53:10,383 | INFO     | all job control threads have been joined
[2026-01-12 20:54:13] 2026-01-12 19:53:10,387 | INFO     | [data] copytool_in thread has finished
[2026-01-12 20:54:13] 2026-01-12 19:53:10,408 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 20:54:13] 2026-01-12 19:53:10,603 | INFO     | [data] control thread has finished
[2026-01-12 20:54:13] 2026-01-12 19:53:10,606 | INFO     | [job] validate thread has finished
[2026-01-12 20:54:13] 2026-01-12 19:53:10,713 | INFO     | [payload] validate_post thread has finished
[2026-01-12 20:54:13] 2026-01-12 19:53:10,903 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 20:54:13] 2026-01-12 19:53:10,995 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 20:54:13] 2026-01-12 19:53:11,049 | INFO     | [payload] control thread has finished
[2026-01-12 20:54:13] 2026-01-12 19:53:11,165 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 20:54:13] 2026-01-12 19:53:11,189 | INFO     | [data] copytool_out thread has finished
[2026-01-12 20:54:13] 2026-01-12 19:53:11,389 | INFO     | [job] control thread has finished
[2026-01-12 20:54:13] 2026-01-12 19:53:11,414 | INFO     | [job] queue monitor thread has finished
[2026-01-12 20:54:13] 2026-01-12 19:53:11,976 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 20:54:13] 2026-01-12 19:53:15,985 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 20:54:13] 2026-01-12 19:53:38,313 | INFO     | PID=19411 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-12 20:54:13] 2026-01-12 19:53:38,313 | INFO     | .. there are 2 such processes running
[2026-01-12 20:54:13] 2026-01-12 19:53:38,313 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 20:54:13] 2026-01-12 19:53:38,313 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 20:54:13] 2026-01-12 19:53:38,313 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 20:54:13] 2026-01-12 19:54:01,825 | INFO     | [monitor] cgroup control has ended
[2026-01-12 20:54:13] 2026-01-12 19:54:02,821 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140067162720064)>', '<ExcThread(monitor, started 140066575861504)>']
[2026-01-12 20:54:13] 2026-01-12 19:54:03,463 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 20:54:13] 2026-01-12 19:54:03,463 | INFO     | [monitor] control thread has ended
[2026-01-12 20:54:13] 2026-01-12 19:54:07,847 | INFO     | all workflow threads have been joined
[2026-01-12 20:54:13] 2026-01-12 19:54:07,847 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 20:54:13] 2026-01-12 19:54:07,848 | INFO     | traces error code: 0
[2026-01-12 20:54:13] 2026-01-12 19:54:07,848 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 20:54:13] 2026-01-12 19:54:08,314 [wrapper] ==== pilot stdout END ====
[2026-01-12 20:54:13] 2026-01-12 19:54:08,431 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 20:54:13] 2026-01-12 19:54:08,532 [wrapper] pilotpid: 19411
[2026-01-12 20:54:13] 2026-01-12 19:54:08,623 [wrapper] Pilot exit status: 0
[2026-01-12 20:54:13] 2026-01-12 19:54:09,121 [wrapper] pandaids: 6967339969
[2026-01-12 20:54:13] 2026-01-12 19:54:10,182 [wrapper] cleanup supervisor_pilot 10620 19412
[2026-01-12 20:54:13] 2026-01-12 19:54:10,299 [wrapper] Test setup, not cleaning
[2026-01-12 20:54:13] 2026-01-12 19:54:10,374 [wrapper] apfmon messages muted
[2026-01-12 20:54:13] 2026-01-12 19:54:10,463 [wrapper] ==== wrapper stdout END ====
[2026-01-12 20:54:13] 2026-01-12 19:54:10,546 [wrapper] ==== wrapper stderr END ====
[2026-01-12 20:54:13]  *** Error codes and diagnostics ***
[2026-01-12 20:54:13]     "exeErrorCode": 0,
[2026-01-12 20:54:13]     "exeErrorDiag": "",
[2026-01-12 20:54:13]     "pilotErrorCode": 0,
[2026-01-12 20:54:13]     "pilotErrorDiag": "",
[2026-01-12 20:54:13]  *** Listing of results directory ***
[2026-01-12 20:54:13] total 434120
[2026-01-12 20:54:13] -rw-r--r--. 1 boinc boinc      5112 Jan 12 18:19 queuedata.json
[2026-01-12 20:54:13] -rw-r--r--. 1 boinc boinc    579449 Jan 12 18:19 pilot3.tar.gz
[2026-01-12 20:54:13] -rwx------. 1 boinc boinc     36322 Jan 12 18:23 runpilot2-wrapper.sh
[2026-01-12 20:54:13] -rw-r--r--. 1 boinc boinc       100 Jan 12 18:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 20:54:13] -rwxr-xr-x. 1 boinc boinc      7986 Jan 12 18:26 run_atlas
[2026-01-12 20:54:13] -rw-r--r--. 1 boinc boinc       105 Jan 12 18:26 job.xml
[2026-01-12 20:54:13] -rw-r--r--. 2 boinc boinc 393778295 Jan 12 18:26 EVNT.47962006._000109.pool.root.1
[2026-01-12 20:54:13] -rw-r--r--. 2 boinc boinc    592616 Jan 12 18:26 input.tar.gz
[2026-01-12 20:54:13] -rw-r--r--. 1 boinc boinc      6393 Jan 12 18:26 init_data.xml
[2026-01-12 20:54:13] -rw-r--r--. 2 boinc boinc     15847 Jan 12 18:26 start_atlas.sh
[2026-01-12 20:54:13] drwxrwx--x. 2 boinc boinc        68 Jan 12 18:26 shared
[2026-01-12 20:54:13] -rw-r--r--. 1 boinc boinc         0 Jan 12 18:26 boinc_lockfile
[2026-01-12 20:54:13] -rw-r--r--. 1 boinc boinc      2890 Jan 12 18:26 pandaJob.out
[2026-01-12 20:54:13] -rw-------. 1 boinc boinc    988539 Jan 12 18:30 agis_schedconf.cvmfs.json
[2026-01-12 20:54:13] -rw-------. 1 boinc boinc   1516240 Jan 12 18:30 agis_ddmendpoints.agis.ALL.json
[2026-01-12 20:54:13] drwx------. 5 boinc boinc      4096 Jan 12 18:30 pilot3
[2026-01-12 20:54:13] -rw-r--r--. 1 boinc boinc       530 Jan 12 20:22 boinc_task_state.xml
[2026-01-12 20:54:13] -rw-------. 1 boinc boinc  41997017 Jan 12 20:50 HITS.47962010._003270.pool.root.1
[2026-01-12 20:54:13] -rw-------. 1 boinc boinc      1016 Jan 12 20:51 memory_monitor_summary.json
[2026-01-12 20:54:13] -rw-------. 1 boinc boinc   1254750 Jan 12 20:51 log.47962010._003270.job.log.tgz.1
[2026-01-12 20:54:13] -rw-------. 1 boinc boinc      8580 Jan 12 20:53 heartbeat.json
[2026-01-12 20:54:13] -rw-------. 1 boinc boinc        95 Jan 12 20:53 pilot_heartbeat.json
[2026-01-12 20:54:13] -rw-r--r--. 1 boinc boinc      8192 Jan 12 20:53 boinc_mmap_file
[2026-01-12 20:54:13] -rw-r--r--. 1 boinc boinc        27 Jan 12 20:53 wrapper_checkpoint.txt
[2026-01-12 20:54:13] -rw-------. 1 boinc boinc      4885 Jan 12 20:54 pilotlog.txt
[2026-01-12 20:54:13] -rw-------. 1 boinc boinc   1173592 Jan 12 20:54 log.47962010._003270.job.log.1
[2026-01-12 20:54:13] -rw-------. 1 boinc boinc       353 Jan 12 20:54 output.list
[2026-01-12 20:54:13] -rw-r--r--. 1 boinc boinc       620 Jan 12 20:54 runtime_log
[2026-01-12 20:54:13] -rw-------. 1 boinc boinc   2447360 Jan 12 20:54 result.tar.gz
[2026-01-12 20:54:13] -rw-r--r--. 1 boinc boinc      8832 Jan 12 20:54 runtime_log.err
[2026-01-12 20:54:13] -rw-------. 1 boinc boinc       654 Jan 12 20:54 4kxNDmLoaz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmlnKDmwmHf6m.diag
[2026-01-12 20:54:13] -rw-r--r--. 1 boinc boinc     21387 Jan 12 20:54 stderr.txt
[2026-01-12 20:54:13] HITS file was successfully produced:
[2026-01-12 20:54:13] -rw-------. 1 boinc boinc 41997017 Jan 12 20:50 shared/HITS.pool.root.1
[2026-01-12 20:54:13]  *** Contents of shared directory: ***
[2026-01-12 20:54:13] total 428556
[2026-01-12 20:54:13] -rw-r--r--. 2 boinc boinc 393778295 Jan 12 18:26 ATLAS.root_0
[2026-01-12 20:54:13] -rw-r--r--. 2 boinc boinc    592616 Jan 12 18:26 input.tar.gz
[2026-01-12 20:54:13] -rw-r--r--. 2 boinc boinc     15847 Jan 12 18:26 start_atlas.sh
[2026-01-12 20:54:13] -rw-------. 1 boinc boinc  41997017 Jan 12 20:50 HITS.pool.root.1
[2026-01-12 20:54:13] -rw-------. 1 boinc boinc   2447360 Jan 12 20:54 result.tar.gz
20:54:14 (15372): run_atlas exited; CPU time 19571.036087
20:54:14 (15372): called boinc_finish(0)

</stderr_txt>
]]>

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