Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:07:50 (29353): wrapper (7.7.26015): starting
00:07:50 (29353): wrapper: running run_atlas (--nthreads 8)
[2026-01-13 00:07:50] Arguments: --nthreads 8
[2026-01-13 00:07:50] Threads: 8
[2026-01-13 00:07:50] Checking for CVMFS
[2026-01-13 00:07:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 00:07:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 00:07:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 00:07:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 00:07:54] 2.11.2.0 29086 40374 102432 155069 3 14 19047469 25165825 96 130560 0 15698542 99.796 10942737 2786 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-13 00:07:54] CVMFS is ok
[2026-01-13 00:07:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 00:07:54] Checking for apptainer binary...
[2026-01-13 00:07:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 00:07:54] Running /usr/bin/apptainer --version
[2026-01-13 00:07:54] apptainer version 1.3.2-1.el7
[2026-01-13 00:07:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 00:08:05] cg-vwn413.simple-grid.lan
[2026-01-13 00:08:05] apptainer works
[2026-01-13 00:08:06] Set ATHENA_PROC_NUMBER=8
[2026-01-13 00:08:06] Set ATHENA_CORE_NUMBER=8
[2026-01-13 00:08:06] Starting ATLAS job with PandaID=6967339959
[2026-01-13 00:08:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 02:43:07]  *** The last 200 lines of the pilot log: ***
[2026-01-13 02:43:07] 2026-01-13 01:42:18,789 | INFO     | time since job start (8989s) is within the limit (349056.0s)
[2026-01-13 02:43:07] 2026-01-13 01:42:19,676 | INFO     | monitor loop #724: job 0:6967339959 is in state 'finished'
[2026-01-13 02:43:07] 2026-01-13 01:42:19,677 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 02:43:07] 2026-01-13 01:42:19,971 | INFO     | PID=681 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-01-13 02:43:07] 2026-01-13 01:42:19,971 | INFO     | .. there are 2 such processes running
[2026-01-13 02:43:07] 2026-01-13 01:42:20,972 | INFO     | time since job start (8991s) is within the limit (349056.0s)
[2026-01-13 02:43:07] 2026-01-13 01:42:22,181 | INFO     | monitor loop #725: job 0:6967339959 is in state 'finished'
[2026-01-13 02:43:07] 2026-01-13 01:42:22,182 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 02:43:07] 2026-01-13 01:42:22,980 | INFO     | time since job start (8993s) is within the limit (349056.0s)
[2026-01-13 02:43:07] 2026-01-13 01:42:24,686 | INFO     | monitor loop #726: job 0:6967339959 is in state 'finished'
[2026-01-13 02:43:07] 2026-01-13 01:42:24,687 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 02:43:07] 2026-01-13 01:42:24,988 | INFO     | time since job start (8995s) is within the limit (349056.0s)
[2026-01-13 02:43:07] 2026-01-13 01:42:27,002 | INFO     | time since job start (8998s) is within the limit (349056.0s)
[2026-01-13 02:43:07] 2026-01-13 01:42:27,193 | INFO     | monitor loop #727: job 0:6967339959 is in state 'finished'
[2026-01-13 02:43:07] 2026-01-13 01:42:27,194 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 02:43:07] 2026-01-13 01:42:29,009 | INFO     | time since job start (9000s) is within the limit (349056.0s)
[2026-01-13 02:43:07] 2026-01-13 01:42:29,152 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 02:43:07] 2026-01-13 01:42:29,153 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-13 02:43:07] 2026-01-13 01:42:29,155 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6967339959/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 02:43:07] 2026-01-13 01:42:29,156 | INFO     | extracted standard info from prmon json
[2026-01-13 02:43:07] 2026-01-13 01:42:29,156 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 02:43:07] 2026-01-13 01:42:29,156 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 02:43:07] 2026-01-13 01:42:29,160 | INFO     | fitting pss+swap vs Time
[2026-01-13 02:43:07] 2026-01-13 01:42:29,160 | INFO     | sum of square deviations: 779933353.6176479
[2026-01-13 02:43:07] 2026-01-13 01:42:29,161 | INFO     | sum of deviations: 20778930817.882324
[2026-01-13 02:43:07] 2026-01-13 01:42:29,161 | INFO     | mean x: 1768264259.1323528
[2026-01-13 02:43:07] 2026-01-13 01:42:29,161 | INFO     | mean y: 1869727.6176470588
[2026-01-13 02:43:07] 2026-01-13 01:42:29,161 | INFO     | intersect: -47108105166.79839
[2026-01-13 02:43:07] 2026-01-13 01:42:29,162 | INFO     | chi2: 41.485345825047595
[2026-01-13 02:43:07] 2026-01-13 01:42:29,162 | INFO     | sum of square deviations: 697055701.5419832
[2026-01-13 02:43:07] 2026-01-13 01:42:29,163 | INFO     | sum of deviations: 47836889763.05336
[2026-01-13 02:43:07] 2026-01-13 01:42:29,163 | INFO     | mean x: 1768264106.6564887
[2026-01-13 02:43:07] 2026-01-13 01:42:29,163 | INFO     | mean y: 1919686.290076336
[2026-01-13 02:43:07] 2026-01-13 01:42:29,164 | INFO     | intersect: -121348863264.01018
[2026-01-13 02:43:07] 2026-01-13 01:42:29,164 | INFO     | chi2: 36.7724158514083
[2026-01-13 02:43:07] 2026-01-13 01:42:29,164 | INFO     | current chi2=36.7724158514083 (change=11.360469293216724 %)
[2026-01-13 02:43:07] 2026-01-13 01:42:29,164 | INFO     | right removable region: 130
[2026-01-13 02:43:07] 2026-01-13 01:42:29,164 | INFO     | sum of square deviations: 697003241.5419832
[2026-01-13 02:43:07] 2026-01-13 01:42:29,165 | INFO     | sum of deviations: -17857915746.69464
[2026-01-13 02:43:07] 2026-01-13 01:42:29,165 | INFO     | mean x: 1768264411.6564887
[2026-01-13 02:43:07] 2026-01-13 01:42:29,166 | INFO     | mean y: 1940816.2290076336
[2026-01-13 02:43:07] 2026-01-13 01:42:29,166 | INFO     | intersect: 45306632386.07173
[2026-01-13 02:43:07] 2026-01-13 01:42:29,166 | INFO     | chi2: 33.53770047867693
[2026-01-13 02:43:07] 2026-01-13 01:42:29,166 | INFO     | current chi2=33.53770047867693 (change=19.157717474231866 %)
[2026-01-13 02:43:07] 2026-01-13 01:42:29,166 | INFO     | left removable region: 10
[2026-01-13 02:43:07] 2026-01-13 01:42:29,167 | INFO     | sum of square deviations: 535740342.36666626
[2026-01-13 02:43:07] 2026-01-13 01:42:29,167 | INFO     | sum of deviations: -18900537354.816666
[2026-01-13 02:43:07] 2026-01-13 01:42:29,168 | INFO     | mean x: 1768264381.2166667
[2026-01-13 02:43:07] 2026-01-13 01:42:29,168 | INFO     | mean y: 2087885.1083333334
[2026-01-13 02:43:07] 2026-01-13 01:42:29,168 | INFO     | intersect: 62385194676.61369
[2026-01-13 02:43:07] 2026-01-13 01:42:29,168 | INFO     | chi2: 21.864710029273503
[2026-01-13 02:43:07] 2026-01-13 01:42:29,168 | INFO     | current memory leak: -35.28 B/s (using 120 data points, chi2=21.86)
[2026-01-13 02:43:07] 2026-01-13 01:42:29,169 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-01-13 02:43:07] 2026-01-13 01:42:29,169 | INFO     | ..............................
[2026-01-13 02:43:07] 2026-01-13 01:42:29,169 | INFO     | . Timing measurements:
[2026-01-13 02:43:07] 2026-01-13 01:42:29,169 | INFO     | . get job = 0 s
[2026-01-13 02:43:07] 2026-01-13 01:42:29,169 | INFO     | . initial setup = 9 s
[2026-01-13 02:43:07] 2026-01-13 01:42:29,169 | INFO     | . payload setup = 189 s
[2026-01-13 02:43:07] 2026-01-13 01:42:29,170 | INFO     | . stage-in = 0 s
[2026-01-13 02:43:07] 2026-01-13 01:42:29,170 | INFO     | . payload execution = 8477 s
[2026-01-13 02:43:07] 2026-01-13 01:42:29,170 | INFO     | . stage-out = 2 s
[2026-01-13 02:43:07] 2026-01-13 01:42:29,170 | INFO     | . log creation = 1 s
[2026-01-13 02:43:07] 2026-01-13 01:42:29,170 | INFO     | ..............................
[2026-01-13 02:43:07] 2026-01-13 01:42:29,288 | INFO     | 
[2026-01-13 02:43:07] 2026-01-13 01:42:29,288 | INFO     | job summary report
[2026-01-13 02:43:07] 2026-01-13 01:42:29,288 | INFO     | --------------------------------------------------
[2026-01-13 02:43:07] 2026-01-13 01:42:29,288 | INFO     | PanDA job id: 6967339959
[2026-01-13 02:43:07] 2026-01-13 01:42:29,288 | INFO     | task id: 47962010
[2026-01-13 02:43:07] 2026-01-13 01:42:29,288 | INFO     | errors: (none)
[2026-01-13 02:43:07] 2026-01-13 01:42:29,289 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 02:43:07] 2026-01-13 01:42:29,289 | INFO     | pilot state: finished 
[2026-01-13 02:43:07] 2026-01-13 01:42:29,289 | INFO     | transexitcode: 0
[2026-01-13 02:43:07] 2026-01-13 01:42:29,289 | INFO     | exeerrorcode: 0
[2026-01-13 02:43:07] 2026-01-13 01:42:29,289 | INFO     | exeerrordiag: 
[2026-01-13 02:43:07] 2026-01-13 01:42:29,289 | INFO     | exitcode: 0
[2026-01-13 02:43:07] 2026-01-13 01:42:29,289 | INFO     | exitmsg: OK
[2026-01-13 02:43:07] 2026-01-13 01:42:29,289 | INFO     | cpuconsumptiontime: 21070 s
[2026-01-13 02:43:07] 2026-01-13 01:42:29,289 | INFO     | nevents: 50
[2026-01-13 02:43:07] 2026-01-13 01:42:29,289 | INFO     | neventsw: 0
[2026-01-13 02:43:07] 2026-01-13 01:42:29,290 | INFO     | pid: 7187
[2026-01-13 02:43:07] 2026-01-13 01:42:29,290 | INFO     | pgrp: 7187
[2026-01-13 02:43:07] 2026-01-13 01:42:29,290 | INFO     | corecount: 8
[2026-01-13 02:43:07] 2026-01-13 01:42:29,290 | INFO     | event service: False
[2026-01-13 02:43:07] 2026-01-13 01:42:29,290 | INFO     | sizes: {0: 2284399, 1: 2284598, 12: 2284598, 22: 2284626, 33: 2284654, 44: 2284710, 55: 2284866, 65: 2284894, 76: 2284922, 87: 2284978, 98: 2285006, 105: 2285576, 
[2026-01-13 02:43:07] 2026-01-13 01:42:29,290 | INFO     | --------------------------------------------------
[2026-01-13 02:43:07] 2026-01-13 01:42:29,290 | INFO     | 
[2026-01-13 02:43:07] 2026-01-13 01:42:29,290 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-01-13 02:43:07] 2026-01-13 01:42:29,814 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 02:43:07] 2026-01-13 01:42:29,814 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 02:43:07] 2026-01-13 01:42:29,814 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 02:43:07] 2026-01-13 01:42:29,814 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 02:43:07] 2026-01-13 01:42:29,815 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 02:43:07] 2026-01-13 01:42:29,815 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 02:43:07] 2026-01-13 01:42:29,815 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 02:43:07] 2026-01-13 01:42:29,815 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 02:43:07] 2026-01-13 01:42:29,815 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 02:43:07] 2026-01-13 01:42:29,815 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 02:43:07] 2026-01-13 01:42:29,815 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 02:43:07] 2026-01-13 01:42:29,815 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 02:43:07] 2026-01-13 01:42:29,816 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 02:43:07] 2026-01-13 01:42:29,816 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 02:43:07] 2026-01-13 01:42:29,816 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 02:43:07] 2026-01-13 01:42:29,816 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 02:43:07] 2026-01-13 01:42:29,816 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 02:43:07] 2026-01-13 01:42:29,816 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 02:43:07] 2026-01-13 01:42:29,816 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 02:43:07] 2026-01-13 01:42:29,816 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 02:43:07] 2026-01-13 01:42:29,817 | INFO     | job 6967339959 has completed (purged errors)
[2026-01-13 02:43:07] 2026-01-13 01:42:29,817 | INFO     | overall cleanup function is called
[2026-01-13 02:43:07] 2026-01-13 01:42:30,833 | INFO     | --- collectZombieJob: --- 10, [7187]
[2026-01-13 02:43:07] 2026-01-13 01:42:30,834 | INFO     | zombie collector waiting for pid 7187
[2026-01-13 02:43:07] 2026-01-13 01:42:30,834 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 02:43:07] 2026-01-13 01:42:30,834 | INFO     | collected zombie processes
[2026-01-13 02:43:07] 2026-01-13 01:42:30,834 | INFO     | will attempt to kill all subprocesses of pid=7187
[2026-01-13 02:43:07] 2026-01-13 01:42:30,920 | INFO     | process IDs to be killed: [7187] (in reverse order)
[2026-01-13 02:43:07] 2026-01-13 01:42:31,842 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 02:43:07] 2026-01-13 01:42:31,842 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 02:43:07] 2026-01-13 01:42:31,844 | INFO     | did not find any defunct processes belonging to 7187
[2026-01-13 02:43:07] 2026-01-13 01:42:31,846 | INFO     | did not find any defunct processes belonging to 7187
[2026-01-13 02:43:07] 2026-01-13 01:42:31,846 | INFO     | ready for new job
[2026-01-13 02:43:07] 2026-01-13 01:42:31,846 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 02:43:07] 2026-01-13 01:42:31,848 | INFO     | ***************************************
[2026-01-13 02:43:07] 2026-01-13 01:42:31,849 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 02:43:07] 2026-01-13 01:42:31,849 | INFO     | ***************************************
[2026-01-13 02:43:07] 2026-01-13 01:42:31,849 | INFO     | 
[2026-01-13 02:43:07] 2026-01-13 01:42:31,850 | INFO     | pilot is running in a VM
[2026-01-13 02:43:07] 2026-01-13 01:42:31,850 | INFO     | architecture information:
[2026-01-13 02:43:07] 2026-01-13 01:42:31,850 | INFO     | executing command: cat /etc/os-release
[2026-01-13 02:43:07] 2026-01-13 01:42:32,144 | INFO     | cat /etc/os-release:
[2026-01-13 02:43:07] NAME="CentOS Linux"
[2026-01-13 02:43:07] VERSION="7 (Core)"
[2026-01-13 02:43:07] ID="centos"
[2026-01-13 02:43:07] ID_LIKE="rhel fedora"
[2026-01-13 02:43:07] VERSION_ID="7"
[2026-01-13 02:43:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 02:43:07] ANSI_COLOR="0;31"
[2026-01-13 02:43:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 02:43:07] HOME_URL="https://www.centos.org/"
[2026-01-13 02:43:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 02:43:07] 
[2026-01-13 02:43:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 02:43:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 02:43:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 02:43:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 02:43:07] 
[2026-01-13 02:43:07] 2026-01-13 01:42:32,144 | INFO     | ***************************************
[2026-01-13 02:43:07] 2026-01-13 01:42:32,648 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-01-13 02:43:07] 2026-01-13 01:42:32,886 | INFO     | sufficient remaining disk space (494988689408 B)
[2026-01-13 02:43:07] 2026-01-13 01:42:32,886 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 02:43:07] 2026-01-13 01:42:32,887 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 02:43:07] 2026-01-13 01:42:32,887 | INFO     | update_server=False
[2026-01-13 02:43:07] 2026-01-13 01:42:32,887 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 02:43:07] 2026-01-13 01:42:32,891 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 02:43:07] 2026-01-13 01:42:33,053 | INFO     | all payload control threads have been joined
[2026-01-13 02:43:07] 2026-01-13 01:42:33,212 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 02:43:07] 2026-01-13 01:42:33,213 | INFO     | aborting loop
[2026-01-13 02:43:07] 2026-01-13 01:42:33,353 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 02:43:07] 2026-01-13 01:42:33,700 | INFO     | all data control threads have been joined
[2026-01-13 02:43:07] 2026-01-13 01:42:33,893 | INFO     | [job] retrieve thread has finished
[2026-01-13 02:43:07] 2026-01-13 01:42:33,988 | INFO     | [payload] validate_post thread has finished
[2026-01-13 02:43:07] 2026-01-13 01:42:34,059 | INFO     | [payload] control thread has finished
[2026-01-13 02:43:07] 2026-01-13 01:42:34,100 | INFO     | all job control threads have been joined
[2026-01-13 02:43:07] 2026-01-13 01:42:34,216 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 02:43:07] 2026-01-13 01:42:34,218 | INFO     | [job] job monitor thread has finished
[2026-01-13 02:43:07] 2026-01-13 01:42:34,273 | INFO     | [job] validate thread has finished
[2026-01-13 02:43:07] 2026-01-13 01:42:34,305 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 02:43:07] 2026-01-13 01:42:34,498 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 02:43:07] 2026-01-13 01:42:34,501 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 02:43:07] 2026-01-13 01:42:34,706 | INFO     | [data] control thread has finished
[2026-01-13 02:43:07] 2026-01-13 01:42:34,879 | INFO     | [data] copytool_in thread has finished
[2026-01-13 02:43:07] 2026-01-13 01:42:34,898 | INFO     | [data] copytool_out thread has finished
[2026-01-13 02:43:07] 2026-01-13 01:42:35,059 | INFO     | [payload] failed_post thread has finished
[2026-01-13 02:43:07] 2026-01-13 01:42:35,106 | INFO     | [job] control thread has finished
[2026-01-13 02:43:07] 2026-01-13 01:42:35,311 | INFO     | [job] queue monitor thread has finished
[2026-01-13 02:43:07] 2026-01-13 01:42:37,362 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 02:43:07] 2026-01-13 01:42:43,655 | INFO     | [monitor] cgroup control has ended
[2026-01-13 02:43:07] 2026-01-13 01:42:43,866 | INFO     | job.realtimelogging is not enabled
[2026-01-13 02:43:07] 2026-01-13 01:42:44,872 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 02:43:07] 2026-01-13 01:42:45,069 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140505325311808)>', '<ExcThread(monitor, started 140504721241856)>']
[2026-01-13 02:43:07] 2026-01-13 01:42:50,095 | INFO     | all workflow threads have been joined
[2026-01-13 02:43:07] 2026-01-13 01:42:50,096 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 02:43:07] 2026-01-13 01:42:50,096 | INFO     | traces error code: 0
[2026-01-13 02:43:07] 2026-01-13 01:42:50,096 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 02:43:07] 2026-01-13 01:43:02,200 | INFO     | PID=681 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-01-13 02:43:07] 2026-01-13 01:43:02,200 | INFO     | .. there are 2 such processes running
[2026-01-13 02:43:07] 2026-01-13 01:43:02,200 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 02:43:07] 2026-01-13 01:43:02,201 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 02:43:07] 2026-01-13 01:43:02,201 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 02:43:07] 2026-01-13 01:43:02,201 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 02:43:07] 2026-01-13 01:43:02,201 | INFO     | [monitor] control thread has ended
[2026-01-13 02:43:07] 2026-01-13 01:43:02,577 [wrapper] ==== pilot stdout END ====
[2026-01-13 02:43:07] 2026-01-13 01:43:02,684 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 02:43:07] 2026-01-13 01:43:02,796 [wrapper] pilotpid: 681
[2026-01-13 02:43:07] 2026-01-13 01:43:02,889 [wrapper] Pilot exit status: 0
[2026-01-13 02:43:07] 2026-01-13 01:43:03,315 [wrapper] pandaids: 6967339959
[2026-01-13 02:43:07] 2026-01-13 01:43:04,148 [wrapper] cleanup supervisor_pilot 26402 682
[2026-01-13 02:43:07] 2026-01-13 01:43:04,274 [wrapper] Test setup, not cleaning
[2026-01-13 02:43:07] 2026-01-13 01:43:04,376 [wrapper] apfmon messages muted
[2026-01-13 02:43:07] 2026-01-13 01:43:04,451 [wrapper] ==== wrapper stdout END ====
[2026-01-13 02:43:07] 2026-01-13 01:43:04,535 [wrapper] ==== wrapper stderr END ====
[2026-01-13 02:43:07]  *** Error codes and diagnostics ***
[2026-01-13 02:43:07]     "exeErrorCode": 0,
[2026-01-13 02:43:07]     "exeErrorDiag": "",
[2026-01-13 02:43:07]     "pilotErrorCode": 0,
[2026-01-13 02:43:07]     "pilotErrorDiag": "",
[2026-01-13 02:43:07]  *** Listing of results directory ***
[2026-01-13 02:43:07] total 438224
[2026-01-13 02:43:07] -rw-r--r--. 1 boinc boinc      5112 Jan 12 18:19 queuedata.json
[2026-01-13 02:43:07] -rw-r--r--. 1 boinc boinc    579449 Jan 12 18:19 pilot3.tar.gz
[2026-01-13 02:43:07] -rwx------. 1 boinc boinc     36322 Jan 12 18:23 runpilot2-wrapper.sh
[2026-01-13 02:43:07] -rw-r--r--. 1 boinc boinc       100 Jan 13 00:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 02:43:07] -rwxr-xr-x. 1 boinc boinc      7986 Jan 13 00:07 run_atlas
[2026-01-13 02:43:07] -rw-r--r--. 1 boinc boinc       105 Jan 13 00:07 job.xml
[2026-01-13 02:43:07] -rw-r--r--. 1 boinc boinc      6392 Jan 13 00:07 init_data.xml
[2026-01-13 02:43:07] -rw-r--r--. 2 boinc boinc 393778295 Jan 13 00:07 EVNT.47962006._000109.pool.root.1
[2026-01-13 02:43:07] -rw-r--r--. 2 boinc boinc     15847 Jan 13 00:07 start_atlas.sh
[2026-01-13 02:43:07] drwxrwx--x. 2 boinc boinc        68 Jan 13 00:07 shared
[2026-01-13 02:43:07] -rw-r--r--. 2 boinc boinc    592620 Jan 13 00:07 input.tar.gz
[2026-01-13 02:43:07] -rw-r--r--. 1 boinc boinc         0 Jan 13 00:07 boinc_lockfile
[2026-01-13 02:43:07] -rw-r--r--. 1 boinc boinc      2890 Jan 13 00:08 pandaJob.out
[2026-01-13 02:43:07] -rw-------. 1 boinc boinc    988531 Jan 13 00:12 agis_schedconf.cvmfs.json
[2026-01-13 02:43:07] -rw-------. 1 boinc boinc   1516240 Jan 13 00:12 agis_ddmendpoints.agis.ALL.json
[2026-01-13 02:43:07] drwx------. 5 boinc boinc      4096 Jan 13 00:12 pilot3
[2026-01-13 02:43:07] -rw-r--r--. 1 boinc boinc       529 Jan 13 02:11 boinc_task_state.xml
[2026-01-13 02:43:07] -rw-------. 1 boinc boinc  46081162 Jan 13 02:39 HITS.47962010._003260.pool.root.1
[2026-01-13 02:43:07] -rw-------. 1 boinc boinc      1018 Jan 13 02:40 memory_monitor_summary.json
[2026-01-13 02:43:07] -rw-------. 1 boinc boinc   1256987 Jan 13 02:40 log.47962010._003260.job.log.tgz.1
[2026-01-13 02:43:07] -rw-------. 1 boinc boinc        95 Jan 13 02:42 pilot_heartbeat.json
[2026-01-13 02:43:07] -rw-------. 1 boinc boinc      8589 Jan 13 02:42 heartbeat.json
[2026-01-13 02:43:07] -rw-r--r--. 1 boinc boinc      8192 Jan 13 02:42 boinc_mmap_file
[2026-01-13 02:43:07] -rw-r--r--. 1 boinc boinc        27 Jan 13 02:42 wrapper_checkpoint.txt
[2026-01-13 02:43:07] -rw-------. 1 boinc boinc       818 Jan 13 02:43 pilotlog.txt
[2026-01-13 02:43:07] -rw-------. 1 boinc boinc   1236794 Jan 13 02:43 log.47962010._003260.job.log.1
[2026-01-13 02:43:07] -rw-------. 1 boinc boinc       353 Jan 13 02:43 output.list
[2026-01-13 02:43:07] -rw-r--r--. 1 boinc boinc       620 Jan 13 02:43 runtime_log
[2026-01-13 02:43:07] -rw-------. 1 boinc boinc   2508800 Jan 13 02:43 result.tar.gz
[2026-01-13 02:43:07] -rw-r--r--. 1 boinc boinc      8832 Jan 13 02:43 runtime_log.err
[2026-01-13 02:43:07] -rw-------. 1 boinc boinc       654 Jan 13 02:43 k8kNDmLoaz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdlnKDmzvtWQn.diag
[2026-01-13 02:43:07] -rw-r--r--. 1 boinc boinc     21348 Jan 13 02:43 stderr.txt
[2026-01-13 02:43:07] HITS file was successfully produced:
[2026-01-13 02:43:07] -rw-------. 1 boinc boinc 46081162 Jan 13 02:39 shared/HITS.pool.root.1
[2026-01-13 02:43:07]  *** Contents of shared directory: ***
[2026-01-13 02:43:07] total 432604
[2026-01-13 02:43:07] -rw-r--r--. 2 boinc boinc 393778295 Jan 13 00:07 ATLAS.root_0
[2026-01-13 02:43:07] -rw-r--r--. 2 boinc boinc     15847 Jan 13 00:07 start_atlas.sh
[2026-01-13 02:43:07] -rw-r--r--. 2 boinc boinc    592620 Jan 13 00:07 input.tar.gz
[2026-01-13 02:43:07] -rw-------. 1 boinc boinc  46081162 Jan 13 02:39 HITS.pool.root.1
[2026-01-13 02:43:07] -rw-------. 1 boinc boinc   2508800 Jan 13 02:43 result.tar.gz
02:43:09 (29353): run_atlas exited; CPU time 21102.581479
02:43:09 (29353): called boinc_finish(0)

</stderr_txt>
]]>

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