Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:09:29 (3945442): wrapper (7.7.26015): starting
20:09:29 (3945442): wrapper: running run_atlas (--nthreads 3)
[2026-01-12 20:09:29] Arguments: --nthreads 3
[2026-01-12 20:09:29] Threads: 3
[2026-01-12 20:09:29] Checking for CVMFS
[2026-01-12 20:09:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 20:09:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 20:09:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 20:09:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 20:09:29] 2.9.2.0 3841579 367 61736 155063 1 56 22320892 36864001 0 130560 0 274542 99.984 16698 5155 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-12 20:09:29] CVMFS is ok
[2026-01-12 20:09:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 20:09:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 20:09:29] Further information can be found at the LHC@home message board.
[2026-01-12 20:09:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 20:09:29] Checking for apptainer binary...
[2026-01-12 20:09:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 20:09:29] Running /usr/bin/apptainer --version
[2026-01-12 20:09:29] apptainer version 1.4.1-1.1
[2026-01-12 20:09:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 20:09:29] atlasA228b
[2026-01-12 20:09:29] apptainer works
[2026-01-12 20:09:29] Set ATHENA_PROC_NUMBER=3
[2026-01-12 20:09:29] Set ATHENA_CORE_NUMBER=3
[2026-01-12 20:09:29] Starting ATLAS job with PandaID=6967236120
[2026-01-12 20:09:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 21:48:55]  *** The last 200 lines of the pilot log: ***
[2026-01-12 21:48:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 21:48:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 21:48:55] 
[2026-01-12 21:48:55] 2026-01-12 20:48:25,131 | INFO     | ***************************************
[2026-01-12 21:48:55] 2026-01-12 20:48:25,635 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-12 21:48:55] 2026-01-12 20:48:25,648 | INFO     | sufficient remaining disk space (283403878400 B)
[2026-01-12 21:48:55] 2026-01-12 20:48:25,648 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 21:48:55] 2026-01-12 20:48:25,649 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 21:48:55] 2026-01-12 20:48:25,649 | INFO     | update_server=False
[2026-01-12 21:48:55] 2026-01-12 20:48:25,649 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 21:48:55] 2026-01-12 20:48:25,649 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 21:48:55] 2026-01-12 20:48:25,649 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 21:48:55] 2026-01-12 20:48:26,080 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-12 21:48:55] 2026-01-12 20:48:26,080 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-12 21:48:55] 2026-01-12 20:48:26,080 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 21:48:55] 2026-01-12 20:48:26,080 | INFO     | will abort loop
[2026-01-12 21:48:55] 2026-01-12 20:48:26,197 | INFO     | all data control threads have been joined
[2026-01-12 21:48:55] 2026-01-12 20:48:26,456 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 21:48:55] 2026-01-12 20:48:26,623 | INFO     | all payload control threads have been joined
[2026-01-12 21:48:55] 2026-01-12 20:48:26,654 | INFO     | [job] retrieve thread has finished
[2026-01-12 21:48:55] 2026-01-12 20:48:26,655 | INFO     | [job] queue monitor thread has finished
[2026-01-12 21:48:55] 2026-01-12 20:48:26,673 | INFO     | [payload] validate_post thread has finished
[2026-01-12 21:48:55] 2026-01-12 20:48:26,723 | INFO     | all job control threads have been joined
[2026-01-12 21:48:55] 2026-01-12 20:48:27,086 | INFO     | [job] job monitor thread has finished
[2026-01-12 21:48:55] 2026-01-12 20:48:27,193 | INFO     | [data] copytool_in thread has finished
[2026-01-12 21:48:55] 2026-01-12 20:48:27,203 | INFO     | [data] control thread has finished
[2026-01-12 21:48:55] 2026-01-12 20:48:27,515 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 21:48:55] 2026-01-12 20:48:27,550 | INFO     | [job] validate thread has finished
[2026-01-12 21:48:55] 2026-01-12 20:48:27,578 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 21:48:55] 2026-01-12 20:48:27,585 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 21:48:55] 2026-01-12 20:48:27,629 | INFO     | [payload] control thread has finished
[2026-01-12 21:48:55] 2026-01-12 20:48:27,729 | INFO     | [job] control thread has finished
[2026-01-12 21:48:55] 2026-01-12 20:48:27,750 | INFO     | [payload] failed_post thread has finished
[2026-01-12 21:48:55] 2026-01-12 20:48:28,462 | INFO     | [data] copytool_out thread has finished
[2026-01-12 21:48:55] 2026-01-12 20:48:29,656 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 21:48:55] 2026-01-12 20:48:36,535 | INFO     | job.realtimelogging is not enabled
[2026-01-12 21:48:55] 2026-01-12 20:48:37,541 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 21:48:55] 2026-01-12 20:48:41,735 | INFO     | [monitor] cgroup control has ended
[2026-01-12 21:48:55] 2026-01-12 20:48:41,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140478528358208)>', '<ExcThread(monitor, started 140477340825344)>']
[2026-01-12 21:48:55] 2026-01-12 20:48:46,934 | INFO     | all workflow threads have been joined
[2026-01-12 21:48:55] 2026-01-12 20:48:46,934 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 21:48:55] 2026-01-12 20:48:46,935 | INFO     | traces error code: 0
[2026-01-12 21:48:55] 2026-01-12 20:48:46,935 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 21:48:55] 2026-01-12 20:48:55,613 | INFO     | PID=3949158 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 21:48:55] 2026-01-12 20:48:55,614 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 21:48:55] 2026-01-12 20:48:55,614 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 21:48:55] 2026-01-12 20:48:55,614 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 21:48:55] 2026-01-12 20:48:55,614 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 21:48:55] 2026-01-12 20:48:55,614 | CRITICAL | thread 'MainThread' is not alive
[2026-01-12 21:48:55] 2026-01-12 20:48:55,614 | INFO     | [monitor] control thread has ended
[2026-01-12 21:48:55] 2026-01-12 20:48:55,662 [wrapper] ==== pilot stdout END ====
[2026-01-12 21:48:55] 2026-01-12 20:48:55,664 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 21:48:55] 2026-01-12 20:48:55,667 [wrapper] pilotpid: 3949158
[2026-01-12 21:48:55] 2026-01-12 20:48:55,669 [wrapper] Pilot exit status: 0
[2026-01-12 21:48:55] 2026-01-12 20:48:55,677 [wrapper] pandaids: 6967236120
[2026-01-12 21:48:55] 2026-01-12 20:48:55,695 [wrapper] cleanup supervisor_pilot 3967529 3949159
[2026-01-12 21:48:55] 2026-01-12 20:48:55,697 [wrapper] Test setup, not cleaning
[2026-01-12 21:48:55] 2026-01-12 20:48:55,700 [wrapper] apfmon messages muted
[2026-01-12 21:48:55] 2026-01-12 20:48:55,702 [wrapper] ==== wrapper stdout END ====
[2026-01-12 21:48:55] 2026-01-12 20:48:55,705 [wrapper] ==== wrapper stderr END ====
[2026-01-12 21:48:55]  *** Error codes and diagnostics ***
[2026-01-12 21:48:55]     "exeErrorCode": 0,
[2026-01-12 21:48:55]     "exeErrorDiag": "",
[2026-01-12 21:48:55]     "pilotErrorCode": 0,
[2026-01-12 21:48:55]     "pilotErrorDiag": "",
[2026-01-12 21:48:55]  *** Listing of results directory ***
[2026-01-12 21:48:55] total 550536
[2026-01-12 21:48:55] -rw-r--r-- 1 boinc boinc    579449 Jan 12 17:03 pilot3.tar.gz
[2026-01-12 21:48:55] -rw-r--r-- 1 boinc boinc      5112 Jan 12 17:43 queuedata.json
[2026-01-12 21:48:55] -rwx------ 1 boinc boinc     36322 Jan 12 17:44 runpilot2-wrapper.sh
[2026-01-12 21:48:55] -rw-r--r-- 1 boinc boinc       100 Jan 12 20:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 21:48:55] -rwxr-xr-x 1 boinc boinc      7986 Jan 12 20:09 run_atlas
[2026-01-12 21:48:55] -rw-r--r-- 1 boinc boinc       105 Jan 12 20:09 job.xml
[2026-01-12 21:48:55] -rw-r--r-- 2 boinc boinc 311572186 Jan 12 20:09 EVNT.48188646._000007.pool.root.1
[2026-01-12 21:48:55] drwxrwx--x 2 boinc boinc      4096 Jan 12 20:09 shared
[2026-01-12 21:48:55] -rw-r--r-- 2 boinc boinc    592406 Jan 12 20:09 input.tar.gz
[2026-01-12 21:48:55] -rw-r--r-- 2 boinc boinc     15847 Jan 12 20:09 start_atlas.sh
[2026-01-12 21:48:55] -rw-r--r-- 1 boinc boinc         0 Jan 12 20:09 boinc_setup_complete
[2026-01-12 21:48:55] -rw-r--r-- 1 boinc boinc      6449 Jan 12 20:09 init_data.xml
[2026-01-12 21:48:55] -rw-r--r-- 1 boinc boinc         0 Jan 12 20:09 boinc_lockfile
[2026-01-12 21:48:55] -rw-r--r-- 1 boinc boinc      2633 Jan 12 20:09 pandaJob.out
[2026-01-12 21:48:55] -rw------- 1 boinc boinc    988539 Jan 12 20:09 agis_schedconf.cvmfs.json
[2026-01-12 21:48:55] -rw------- 1 boinc boinc   1516240 Jan 12 20:09 agis_ddmendpoints.agis.ALL.json
[2026-01-12 21:48:55] drwx------ 5 boinc boinc      4096 Jan 12 20:09 pilot3
[2026-01-12 21:48:55] -rw------- 1 boinc boinc 245956817 Jan 12 21:47 HITS.48188648._000207.pool.root.1
[2026-01-12 21:48:55] -rw-r--r-- 1 boinc boinc       529 Jan 12 21:48 boinc_task_state.xml
[2026-01-12 21:48:55] -rw------- 1 boinc boinc        95 Jan 12 21:48 pilot_heartbeat.json
[2026-01-12 21:48:55] -rw------- 1 boinc boinc      1012 Jan 12 21:48 memory_monitor_summary.json
[2026-01-12 21:48:55] -rw------- 1 boinc boinc    297634 Jan 12 21:48 log.48188648._000207.job.log.tgz.1
[2026-01-12 21:48:55] -rw------- 1 boinc boinc      7739 Jan 12 21:48 heartbeat.json
[2026-01-12 21:48:55] -rw-r--r-- 1 boinc boinc        27 Jan 12 21:48 wrapper_checkpoint.txt
[2026-01-12 21:48:55] -rw-r--r-- 1 boinc boinc      8192 Jan 12 21:48 boinc_mmap_file
[2026-01-12 21:48:55] -rw------- 1 boinc boinc       817 Jan 12 21:48 pilotlog.txt
[2026-01-12 21:48:55] -rw------- 1 boinc boinc    862617 Jan 12 21:48 log.48188648._000207.job.log.1
[2026-01-12 21:48:55] -rw------- 1 boinc boinc       357 Jan 12 21:48 output.list
[2026-01-12 21:48:55] -rw-r--r-- 1 boinc boinc       620 Jan 12 21:48 runtime_log
[2026-01-12 21:48:55] -rw------- 1 boinc boinc   1177600 Jan 12 21:48 result.tar.gz
[2026-01-12 21:48:55] -rw-r--r-- 1 boinc boinc      8917 Jan 12 21:48 runtime_log.err
[2026-01-12 21:48:55] -rw------- 1 boinc boinc       662 Jan 12 21:48 7aiLDmYCaz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZknKDmWpXSan.diag
[2026-01-12 21:48:55] -rw-r--r-- 1 boinc boinc      8513 Jan 12 21:48 stderr.txt
[2026-01-12 21:48:55] HITS file was successfully produced:
[2026-01-12 21:48:55] -rw------- 1 boinc boinc 245956817 Jan 12 21:47 shared/HITS.pool.root.1
[2026-01-12 21:48:55]  *** Contents of shared directory: ***
[2026-01-12 21:48:55] total 546224
[2026-01-12 21:48:55] -rw-r--r-- 2 boinc boinc 311572186 Jan 12 20:09 ATLAS.root_0
[2026-01-12 21:48:55] -rw-r--r-- 2 boinc boinc    592406 Jan 12 20:09 input.tar.gz
[2026-01-12 21:48:55] -rw-r--r-- 2 boinc boinc     15847 Jan 12 20:09 start_atlas.sh
[2026-01-12 21:48:55] -rw------- 1 boinc boinc 245956817 Jan 12 21:47 HITS.pool.root.1
[2026-01-12 21:48:55] -rw------- 1 boinc boinc   1177600 Jan 12 21:48 result.tar.gz
21:48:57 (3945442): run_atlas exited; CPU time 17085.621739
21:48:57 (3945442): called boinc_finish(0)

</stderr_txt>
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