Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:57:26 (12885): wrapper (7.7.26015): starting
21:57:26 (12885): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 21:57:26] Arguments: --nthreads 8
[2026-01-12 21:57:26] Threads: 8
[2026-01-12 21:57:26] Checking for CVMFS
[2026-01-12 21:57:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 21:57:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 21:57:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 21:57:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 21:57:29] 2.11.2.0 31595 40243 124420 155065 1 61 23380104 25165825 96 130560 0 17623374 99.827 9640778 2827 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-12 21:57:29] CVMFS is ok
[2026-01-12 21:57:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 21:57:29] Checking for apptainer binary...
[2026-01-12 21:57:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 21:57:29] Running /usr/bin/apptainer --version
[2026-01-12 21:57:30] apptainer version 1.3.2-1.el7
[2026-01-12 21:57:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 21:57:57] cg-vwn421.simple-grid.lan
[2026-01-12 21:57:57] apptainer works
[2026-01-12 21:57:57] Set ATHENA_PROC_NUMBER=8
[2026-01-12 21:57:57] Set ATHENA_CORE_NUMBER=8
[2026-01-12 21:57:57] Starting ATLAS job with PandaID=6967236155
[2026-01-12 21:57:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 03:38:48]  *** The last 200 lines of the pilot log: ***
[2026-01-13 03:38:48] 2026-01-13 02:38:01,174 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 03:38:48] 2026-01-13 02:38:01,175 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-13 03:38:48] 2026-01-13 02:38:01,177 | INFO     | using path: /var/lib/boinc/slots/24/PanDA_Pilot-6967236155/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 03:38:48] 2026-01-13 02:38:01,178 | INFO     | extracted standard info from prmon json
[2026-01-13 03:38:48] 2026-01-13 02:38:01,178 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 03:38:48] 2026-01-13 02:38:01,178 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 03:38:48] 2026-01-13 02:38:01,178 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 03:38:48] 2026-01-13 02:38:01,178 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 03:38:48] 2026-01-13 02:38:01,185 | INFO     | fitting pss+swap vs Time
[2026-01-13 03:38:48] 2026-01-13 02:38:01,186 | INFO     | sum of square deviations: 10160711440.0
[2026-01-13 03:38:48] 2026-01-13 02:38:01,190 | INFO     | sum of deviations: 86594409829.0
[2026-01-13 03:38:48] 2026-01-13 02:38:01,190 | INFO     | mean x: 1768262008.5
[2026-01-13 03:38:48] 2026-01-13 02:38:01,190 | INFO     | mean y: 2518203.0
[2026-01-13 03:38:48] 2026-01-13 02:38:01,190 | INFO     | intersect: -15067450662.201794
[2026-01-13 03:38:48] 2026-01-13 02:38:01,191 | INFO     | chi2: 8.450467179862601
[2026-01-13 03:38:48] 2026-01-13 02:38:01,191 | INFO     | sum of square deviations: 9691828230.0
[2026-01-13 03:38:48] 2026-01-13 02:38:01,201 | INFO     | sum of deviations: 106609794855.00002
[2026-01-13 03:38:48] 2026-01-13 02:38:01,201 | INFO     | mean x: 1768261856.0
[2026-01-13 03:38:48] 2026-01-13 02:38:01,201 | INFO     | mean y: 2524624.234920635
[2026-01-13 03:38:48] 2026-01-13 02:38:01,201 | INFO     | intersect: -19448298197.25885
[2026-01-13 03:38:48] 2026-01-13 02:38:01,202 | INFO     | chi2: 7.744751414765994
[2026-01-13 03:38:48] 2026-01-13 02:38:01,202 | INFO     | current chi2=7.744751414765994 (change=8.351204141450575 %)
[2026-01-13 03:38:48] 2026-01-13 02:38:01,202 | INFO     | right removable region: 314
[2026-01-13 03:38:48] 2026-01-13 02:38:01,203 | INFO     | sum of square deviations: 9691828230.0
[2026-01-13 03:38:48] 2026-01-13 02:38:01,206 | INFO     | sum of deviations: -30592334601.999985
[2026-01-13 03:38:48] 2026-01-13 02:38:01,206 | INFO     | mean x: 1768262161.0
[2026-01-13 03:38:48] 2026-01-13 02:38:01,207 | INFO     | mean y: 2556305.6285714284
[2026-01-13 03:38:48] 2026-01-13 02:38:01,207 | INFO     | intersect: 5584090192.694538
[2026-01-13 03:38:48] 2026-01-13 02:38:01,207 | INFO     | chi2: 3.3620785808802376
[2026-01-13 03:38:48] 2026-01-13 02:38:01,207 | INFO     | current chi2=3.3620785808802376 (change=60.214287455112 %)
[2026-01-13 03:38:48] 2026-01-13 02:38:01,208 | INFO     | sum of square deviations: 9237596457.5
[2026-01-13 03:38:48] 2026-01-13 02:38:01,211 | INFO     | sum of deviations: -106480130296.49998
[2026-01-13 03:38:48] 2026-01-13 02:38:01,218 | INFO     | mean x: 1768262313.5
[2026-01-13 03:38:48] 2026-01-13 02:38:01,219 | INFO     | mean y: 2581719.9903225806
[2026-01-13 03:38:48] 2026-01-13 02:38:01,219 | INFO     | intersect: 20385026699.71253
[2026-01-13 03:38:48] 2026-01-13 02:38:01,220 | INFO     | chi2: 1.1464251108080532
[2026-01-13 03:38:48] 2026-01-13 02:38:01,220 | INFO     | current chi2=1.1464251108080532 (change=65.90129935309533 %)
[2026-01-13 03:38:48] 2026-01-13 02:38:01,220 | INFO     | sum of square deviations: 8797783560.0
[2026-01-13 03:38:48] 2026-01-13 02:38:01,224 | INFO     | sum of deviations: -113376587929.00002
[2026-01-13 03:38:48] 2026-01-13 02:38:01,224 | INFO     | mean x: 1768262466.0
[2026-01-13 03:38:48] 2026-01-13 02:38:01,224 | INFO     | mean y: 2584075.3803278687
[2026-01-13 03:38:48] 2026-01-13 02:38:01,224 | INFO     | intersect: 22790092268.86439
[2026-01-13 03:38:48] 2026-01-13 02:38:01,225 | INFO     | chi2: 1.0618266604845013
[2026-01-13 03:38:48] 2026-01-13 02:38:01,225 | INFO     | current chi2=1.0618266604845013 (change=7.379326353373669 %)
[2026-01-13 03:38:48] 2026-01-13 02:38:01,225 | INFO     | left removable region: 30
[2026-01-13 03:38:48] 2026-01-13 02:38:01,226 | INFO     | sum of square deviations: 7102775035.0
[2026-01-13 03:38:48] 2026-01-13 02:38:01,228 | INFO     | sum of deviations: -64935677666.00001
[2026-01-13 03:38:48] 2026-01-13 02:38:01,229 | INFO     | mean x: 1768262740.5
[2026-01-13 03:38:48] 2026-01-13 02:38:01,229 | INFO     | mean y: 2581946.4929577466
[2026-01-13 03:38:48] 2026-01-13 02:38:01,229 | INFO     | intersect: 16168564788.423952
[2026-01-13 03:38:48] 2026-01-13 02:38:01,229 | INFO     | chi2: 0.2534499812755978
[2026-01-13 03:38:48] 2026-01-13 02:38:01,229 | INFO     | current memory leak: -9.14 B/s (using 284 data points, chi2=0.25)
[2026-01-13 03:38:48] 2026-01-13 02:38:01,230 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-13 03:38:48] 2026-01-13 02:38:01,230 | INFO     | ..............................
[2026-01-13 03:38:48] 2026-01-13 02:38:01,231 | INFO     | . Timing measurements:
[2026-01-13 03:38:48] 2026-01-13 02:38:01,231 | INFO     | . get job = 0 s
[2026-01-13 03:38:48] 2026-01-13 02:38:01,231 | INFO     | . initial setup = 10 s
[2026-01-13 03:38:48] 2026-01-13 02:38:01,231 | INFO     | . payload setup = 155 s
[2026-01-13 03:38:48] 2026-01-13 02:38:01,231 | INFO     | . stage-in = 0 s
[2026-01-13 03:38:48] 2026-01-13 02:38:01,231 | INFO     | . payload execution = 19659 s
[2026-01-13 03:38:48] 2026-01-13 02:38:01,231 | INFO     | . stage-out = 7 s
[2026-01-13 03:38:48] 2026-01-13 02:38:01,231 | INFO     | . log creation = 1 s
[2026-01-13 03:38:48] 2026-01-13 02:38:01,231 | INFO     | ..............................
[2026-01-13 03:38:48] 2026-01-13 02:38:01,235 | INFO     | time since job start (20158s) is within the limit (349056.0s)
[2026-01-13 03:38:48] 2026-01-13 02:38:01,410 | INFO     | 
[2026-01-13 03:38:48] 2026-01-13 02:38:01,410 | INFO     | job summary report
[2026-01-13 03:38:48] 2026-01-13 02:38:01,410 | INFO     | --------------------------------------------------
[2026-01-13 03:38:48] 2026-01-13 02:38:01,410 | INFO     | PanDA job id: 6967236155
[2026-01-13 03:38:48] 2026-01-13 02:38:01,411 | INFO     | task id: 48188648
[2026-01-13 03:38:48] 2026-01-13 02:38:01,411 | INFO     | errors: (none)
[2026-01-13 03:38:48] 2026-01-13 02:38:01,411 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 03:38:48] 2026-01-13 02:38:01,411 | INFO     | pilot state: finished 
[2026-01-13 03:38:48] 2026-01-13 02:38:01,411 | INFO     | transexitcode: 0
[2026-01-13 03:38:48] 2026-01-13 02:38:01,411 | INFO     | exeerrorcode: 0
[2026-01-13 03:38:48] 2026-01-13 02:38:01,411 | INFO     | exeerrordiag: 
[2026-01-13 03:38:48] 2026-01-13 02:38:01,411 | INFO     | exitcode: 0
[2026-01-13 03:38:48] 2026-01-13 02:38:01,411 | INFO     | exitmsg: OK
[2026-01-13 03:38:48] 2026-01-13 02:38:01,412 | INFO     | cpuconsumptiontime: 73741 s
[2026-01-13 03:38:48] 2026-01-13 02:38:01,412 | INFO     | nevents: 400
[2026-01-13 03:38:48] 2026-01-13 02:38:01,412 | INFO     | neventsw: 0
[2026-01-13 03:38:48] 2026-01-13 02:38:01,412 | INFO     | pid: 23093
[2026-01-13 03:38:48] 2026-01-13 02:38:01,412 | INFO     | pgrp: 23093
[2026-01-13 03:38:48] 2026-01-13 02:38:01,412 | INFO     | corecount: 8
[2026-01-13 03:38:48] 2026-01-13 02:38:01,412 | INFO     | event service: False
[2026-01-13 03:38:48] 2026-01-13 02:38:01,412 | INFO     | sizes: {0: 2283299, 1: 2283985, 2: 2284184, 13: 2284184, 23: 2284240, 34: 2284268, 45: 2284424, 56: 2284452, 66: 2284480, 77: 2284508, 88: 2284564, 99: 2284872, 11
[2026-01-13 03:38:48] 2026-01-13 02:38:01,412 | INFO     | --------------------------------------------------
[2026-01-13 03:38:48] 2026-01-13 02:38:01,413 | INFO     | 
[2026-01-13 03:38:48] 2026-01-13 02:38:01,413 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2026-01-13 03:38:48] 2026-01-13 02:38:01,778 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 03:38:48] 2026-01-13 02:38:01,778 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 03:38:48] 2026-01-13 02:38:01,779 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 03:38:48] 2026-01-13 02:38:01,779 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 03:38:48] 2026-01-13 02:38:01,779 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 03:38:48] 2026-01-13 02:38:01,779 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 03:38:48] 2026-01-13 02:38:01,779 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 03:38:48] 2026-01-13 02:38:01,779 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 03:38:48] 2026-01-13 02:38:01,779 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 03:38:48] 2026-01-13 02:38:01,779 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 03:38:48] 2026-01-13 02:38:01,779 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 03:38:48] 2026-01-13 02:38:01,780 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 03:38:48] 2026-01-13 02:38:01,780 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 03:38:48] 2026-01-13 02:38:01,780 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 03:38:48] 2026-01-13 02:38:01,780 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 03:38:48] 2026-01-13 02:38:01,780 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 03:38:48] 2026-01-13 02:38:01,780 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 03:38:48] 2026-01-13 02:38:01,780 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 03:38:48] 2026-01-13 02:38:01,780 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 03:38:48] 2026-01-13 02:38:01,780 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 03:38:48] 2026-01-13 02:38:01,781 | INFO     | job 6967236155 has completed (purged errors)
[2026-01-13 03:38:48] 2026-01-13 02:38:01,781 | INFO     | overall cleanup function is called
[2026-01-13 03:38:48] 2026-01-13 02:38:02,790 | INFO     | --- collectZombieJob: --- 10, [23093]
[2026-01-13 03:38:48] 2026-01-13 02:38:02,790 | INFO     | zombie collector waiting for pid 23093
[2026-01-13 03:38:48] 2026-01-13 02:38:02,790 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 03:38:48] 2026-01-13 02:38:02,790 | INFO     | collected zombie processes
[2026-01-13 03:38:48] 2026-01-13 02:38:02,790 | INFO     | will attempt to kill all subprocesses of pid=23093
[2026-01-13 03:38:48] 2026-01-13 02:38:02,865 | INFO     | process IDs to be killed: [23093] (in reverse order)
[2026-01-13 03:38:48] 2026-01-13 02:38:02,926 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 03:38:48] 2026-01-13 02:38:02,927 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 03:38:48] 2026-01-13 02:38:02,929 | INFO     | did not find any defunct processes belonging to 23093
[2026-01-13 03:38:48] 2026-01-13 02:38:02,931 | INFO     | did not find any defunct processes belonging to 23093
[2026-01-13 03:38:48] 2026-01-13 02:38:02,931 | INFO     | ready for new job
[2026-01-13 03:38:48] 2026-01-13 02:38:02,931 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 03:38:48] 2026-01-13 02:38:02,933 | INFO     | ***************************************
[2026-01-13 03:38:48] 2026-01-13 02:38:02,934 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 03:38:48] 2026-01-13 02:38:02,934 | INFO     | ***************************************
[2026-01-13 03:38:48] 2026-01-13 02:38:02,934 | INFO     | 
[2026-01-13 03:38:48] 2026-01-13 02:38:02,934 | INFO     | pilot is running in a VM
[2026-01-13 03:38:48] 2026-01-13 02:38:02,935 | INFO     | architecture information:
[2026-01-13 03:38:48] 2026-01-13 02:38:02,935 | INFO     | executing command: cat /etc/os-release
[2026-01-13 03:38:48] 2026-01-13 02:38:03,131 | INFO     | cat /etc/os-release:
[2026-01-13 03:38:48] NAME="CentOS Linux"
[2026-01-13 03:38:48] VERSION="7 (Core)"
[2026-01-13 03:38:48] ID="centos"
[2026-01-13 03:38:48] ID_LIKE="rhel fedora"
[2026-01-13 03:38:48] VERSION_ID="7"
[2026-01-13 03:38:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 03:38:48] ANSI_COLOR="0;31"
[2026-01-13 03:38:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 03:38:48] HOME_URL="https://www.centos.org/"
[2026-01-13 03:38:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 03:38:48] 
[2026-01-13 03:38:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 03:38:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 03:38:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 03:38:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 03:38:48] 
[2026-01-13 03:38:48] 2026-01-13 02:38:03,131 | INFO     | ***************************************
[2026-01-13 03:38:48] 2026-01-13 02:38:03,635 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2026-01-13 03:38:48] 2026-01-13 02:38:03,873 | INFO     | sufficient remaining disk space (496023633920 B)
[2026-01-13 03:38:48] 2026-01-13 02:38:03,874 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 03:38:48] 2026-01-13 02:38:03,874 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 03:38:48] 2026-01-13 02:38:03,874 | INFO     | update_server=False
[2026-01-13 03:38:48] 2026-01-13 02:38:03,874 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 03:38:48] 2026-01-13 02:38:03,875 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 03:38:48] 2026-01-13 02:38:03,875 | INFO     | aborting loop
[2026-01-13 03:38:48] 2026-01-13 02:38:03,880 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 03:38:48] 2026-01-13 02:38:04,749 | INFO     | all data control threads have been joined
[2026-01-13 03:38:48] 2026-01-13 02:38:04,770 | INFO     | all payload control threads have been joined
[2026-01-13 03:38:48] 2026-01-13 02:38:04,856 | INFO     | all job control threads have been joined
[2026-01-13 03:38:48] 2026-01-13 02:38:04,880 | INFO     | [job] retrieve thread has finished
[2026-01-13 03:38:48] 2026-01-13 02:38:04,881 | INFO     | [job] job monitor thread has finished
[2026-01-13 03:38:48] 2026-01-13 02:38:05,048 | INFO     | [payload] validate_post thread has finished
[2026-01-13 03:38:48] 2026-01-13 02:38:05,249 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 03:38:48] 2026-01-13 02:38:05,497 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 03:38:48] 2026-01-13 02:38:05,608 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 03:38:48] 2026-01-13 02:38:05,628 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 03:38:48] 2026-01-13 02:38:05,755 | INFO     | [data] control thread has finished
[2026-01-13 03:38:48] 2026-01-13 02:38:05,778 | INFO     | [payload] control thread has finished
[2026-01-13 03:38:48] 2026-01-13 02:38:05,862 | INFO     | [job] control thread has finished
[2026-01-13 03:38:48] 2026-01-13 02:38:05,886 | INFO     | [data] copytool_out thread has finished
[2026-01-13 03:38:48] 2026-01-13 02:38:06,181 | INFO     | [payload] failed_post thread has finished
[2026-01-13 03:38:48] 2026-01-13 02:38:06,257 | INFO     | [job] validate thread has finished
[2026-01-13 03:38:48] 2026-01-13 02:38:06,283 | INFO     | [data] copytool_in thread has finished
[2026-01-13 03:38:48] 2026-01-13 02:38:06,383 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 03:38:48] 2026-01-13 02:38:06,425 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 03:38:48] 2026-01-13 02:38:07,431 | INFO     | [job] queue monitor thread has finished
[2026-01-13 03:38:48] 2026-01-13 02:38:09,637 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 03:38:48] 2026-01-13 02:38:34,351 | INFO     | PID=16631 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-13 03:38:48] 2026-01-13 02:38:34,351 | INFO     | .. there are 2 such processes running
[2026-01-13 03:38:48] 2026-01-13 02:38:34,351 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 03:38:48] 2026-01-13 02:38:34,352 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 03:38:48] 2026-01-13 02:38:34,352 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 03:38:48] 2026-01-13 02:38:37,464 | INFO     | [monitor] cgroup control has ended
[2026-01-13 03:38:48] 2026-01-13 02:38:38,563 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140528152409920)>', '<ExcThread(monitor, started 140527345321728)>']
[2026-01-13 03:38:48] 2026-01-13 02:38:39,382 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 03:38:48] 2026-01-13 02:38:39,382 | INFO     | [monitor] control thread has ended
[2026-01-13 03:38:48] 2026-01-13 02:38:43,589 | INFO     | all workflow threads have been joined
[2026-01-13 03:38:48] 2026-01-13 02:38:43,589 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 03:38:48] 2026-01-13 02:38:43,589 | INFO     | traces error code: 0
[2026-01-13 03:38:48] 2026-01-13 02:38:43,589 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 03:38:48] 2026-01-13 02:38:43,923 [wrapper] ==== pilot stdout END ====
[2026-01-13 03:38:48] 2026-01-13 02:38:44,020 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 03:38:48] 2026-01-13 02:38:44,111 [wrapper] pilotpid: 16631
[2026-01-13 03:38:48] 2026-01-13 02:38:44,204 [wrapper] Pilot exit status: 0
[2026-01-13 03:38:48] 2026-01-13 02:38:44,799 [wrapper] pandaids: 6967236155
[2026-01-13 03:38:48] 2026-01-13 02:38:45,815 [wrapper] cleanup supervisor_pilot 21378 16632
[2026-01-13 03:38:48] 2026-01-13 02:38:45,880 [wrapper] Test setup, not cleaning
[2026-01-13 03:38:48] 2026-01-13 02:38:45,994 [wrapper] apfmon messages muted
[2026-01-13 03:38:48] 2026-01-13 02:38:46,048 [wrapper] ==== wrapper stdout END ====
[2026-01-13 03:38:48] 2026-01-13 02:38:46,145 [wrapper] ==== wrapper stderr END ====
[2026-01-13 03:38:48]  *** Error codes and diagnostics ***
[2026-01-13 03:38:48]     "exeErrorCode": 0,
[2026-01-13 03:38:48]     "exeErrorDiag": "",
[2026-01-13 03:38:48]     "pilotErrorCode": 0,
[2026-01-13 03:38:48]     "pilotErrorDiag": "",
[2026-01-13 03:38:48]  *** Listing of results directory ***
[2026-01-13 03:38:48] total 562432
[2026-01-13 03:38:48] -rw-r--r--. 1 boinc boinc    579449 Jan 12 17:03 pilot3.tar.gz
[2026-01-13 03:38:48] -rw-r--r--. 1 boinc boinc      5112 Jan 12 17:43 queuedata.json
[2026-01-13 03:38:48] -rwx------. 1 boinc boinc     36322 Jan 12 17:45 runpilot2-wrapper.sh
[2026-01-13 03:38:48] -rw-r--r--. 1 boinc boinc       100 Jan 12 21:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 03:38:48] -rwxr-xr-x. 1 boinc boinc      7986 Jan 12 21:57 run_atlas
[2026-01-13 03:38:48] -rw-r--r--. 1 boinc boinc       105 Jan 12 21:57 job.xml
[2026-01-13 03:38:48] -rw-r--r--. 2 boinc boinc 308738006 Jan 12 21:57 EVNT.48188646._000008.pool.root.1
[2026-01-13 03:38:48] -rw-r--r--. 2 boinc boinc     15847 Jan 12 21:57 start_atlas.sh
[2026-01-13 03:38:48] drwxrwx--x. 2 boinc boinc        68 Jan 12 21:57 shared
[2026-01-13 03:38:48] -rw-r--r--. 2 boinc boinc    592408 Jan 12 21:57 input.tar.gz
[2026-01-13 03:38:48] -rw-r--r--. 1 boinc boinc      6391 Jan 12 21:57 init_data.xml
[2026-01-13 03:38:48] -rw-r--r--. 1 boinc boinc         0 Jan 12 21:57 boinc_lockfile
[2026-01-13 03:38:48] -rw-r--r--. 1 boinc boinc      2633 Jan 12 21:57 pandaJob.out
[2026-01-13 03:38:48] -rw-------. 1 boinc boinc    988547 Jan 12 22:01 agis_schedconf.cvmfs.json
[2026-01-13 03:38:48] drwx------. 5 boinc boinc      4096 Jan 12 22:02 pilot3
[2026-01-13 03:38:48] -rw-------. 1 boinc boinc 256791257 Jan 13 03:34 HITS.48188648._000242.pool.root.1
[2026-01-13 03:38:48] -rw-r--r--. 1 boinc boinc       531 Jan 13 03:35 boinc_task_state.xml
[2026-01-13 03:38:48] -rw-------. 1 boinc boinc      1012 Jan 13 03:36 memory_monitor_summary.json
[2026-01-13 03:38:48] -rw-------. 1 boinc boinc   1516240 Jan 13 03:36 agis_ddmendpoints.agis.ALL.json
[2026-01-13 03:38:48] -rw-------. 1 boinc boinc    575547 Jan 13 03:36 log.48188648._000242.job.log.tgz.1
[2026-01-13 03:38:48] -rw-------. 1 boinc boinc        95 Jan 13 03:37 pilot_heartbeat.json
[2026-01-13 03:38:48] -rw-------. 1 boinc boinc      7766 Jan 13 03:38 heartbeat.json
[2026-01-13 03:38:48] -rw-r--r--. 1 boinc boinc      8192 Jan 13 03:38 boinc_mmap_file
[2026-01-13 03:38:48] -rw-r--r--. 1 boinc boinc        28 Jan 13 03:38 wrapper_checkpoint.txt
[2026-01-13 03:38:48] -rw-------. 1 boinc boinc      4885 Jan 13 03:38 pilotlog.txt
[2026-01-13 03:38:48] -rw-------. 1 boinc boinc   2675841 Jan 13 03:38 log.48188648._000242.job.log.1
[2026-01-13 03:38:48] -rw-------. 1 boinc boinc       357 Jan 13 03:38 output.list
[2026-01-13 03:38:48] -rw-r--r--. 1 boinc boinc       620 Jan 13 03:38 runtime_log
[2026-01-13 03:38:48] -rw-------. 1 boinc boinc   3266560 Jan 13 03:38 result.tar.gz
[2026-01-13 03:38:48] -rw-r--r--. 1 boinc boinc      8833 Jan 13 03:38 runtime_log.err
[2026-01-13 03:38:48] -rw-------. 1 boinc boinc       657 Jan 13 03:38 pT2LDmWDaz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpknKDmtRCnRn.diag
[2026-01-13 03:38:48] -rw-r--r--. 1 boinc boinc     20773 Jan 13 03:38 stderr.txt
[2026-01-13 03:38:48] HITS file was successfully produced:
[2026-01-13 03:38:48] -rw-------. 1 boinc boinc 256791257 Jan 13 03:34 shared/HITS.pool.root.1
[2026-01-13 03:38:48]  *** Contents of shared directory: ***
[2026-01-13 03:38:48] total 556068
[2026-01-13 03:38:48] -rw-r--r--. 2 boinc boinc 308738006 Jan 12 21:57 ATLAS.root_0
[2026-01-13 03:38:48] -rw-r--r--. 2 boinc boinc     15847 Jan 12 21:57 start_atlas.sh
[2026-01-13 03:38:48] -rw-r--r--. 2 boinc boinc    592408 Jan 12 21:57 input.tar.gz
[2026-01-13 03:38:48] -rw-------. 1 boinc boinc 256791257 Jan 13 03:34 HITS.pool.root.1
[2026-01-13 03:38:48] -rw-------. 1 boinc boinc   3266560 Jan 13 03:38 result.tar.gz
03:38:49 (12885): run_atlas exited; CPU time 73946.345744
03:38:49 (12885): called boinc_finish(0)

</stderr_txt>
]]>

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