Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:15:08 (2750141): wrapper (7.7.26015): starting
20:15:08 (2750141): wrapper: running run_atlas (--nthreads 4)
[2026-01-12 20:15:08] Arguments: --nthreads 4
[2026-01-12 20:15:08] Threads: 4
[2026-01-12 20:15:08] Checking for CVMFS
[2026-01-12 20:15:08] No cvmfs_config command found, will try listing directly
[2026-01-12 20:15:08] CVMFS is ok
[2026-01-12 20:15:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 20:15:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 20:15:08] Further information can be found at the LHC@home message board.
[2026-01-12 20:15:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 20:15:08] Checking for apptainer binary...
[2026-01-12 20:15:08] which: no apptainer in ((null))
[2026-01-12 20:15:08] apptainer is not installed, using version from CVMFS
[2026-01-12 20:15:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 20:15:09] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-01-12 20:15:09] apptainer works
[2026-01-12 20:15:09] Set ATHENA_PROC_NUMBER=4
[2026-01-12 20:15:09] Set ATHENA_CORE_NUMBER=4
[2026-01-12 20:15:09] Starting ATLAS job with PandaID=6967236007
[2026-01-12 20:15:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 00:14:03]  *** The last 200 lines of the pilot log: ***
[2026-01-13 00:14:03] 2026-01-12 22:20:48,340 | INFO     | time since job start (11126s) is within the limit (349056.0s)
[2026-01-13 00:14:03] 2026-01-12 22:20:49,482 | INFO     | monitor loop #773: job 0:6967236007 is in state 'finished'
[2026-01-13 00:14:03] 2026-01-12 22:20:49,482 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 00:14:03] 2026-01-12 22:20:50,346 | INFO     | time since job start (11128s) is within the limit (349056.0s)
[2026-01-13 00:14:03] 2026-01-12 22:20:51,540 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 00:14:03] 2026-01-12 22:20:51,603 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2715.8096015625
[2026-01-13 00:14:03] 2026-01-12 22:20:51,633 | INFO     | using path: /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6967236007/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 00:14:03] 2026-01-12 22:20:51,634 | INFO     | extracted standard info from prmon json
[2026-01-13 00:14:03] 2026-01-12 22:20:51,634 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 00:14:03] 2026-01-12 22:20:51,634 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 00:14:03] 2026-01-12 22:20:51,635 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 00:14:03] 2026-01-12 22:20:51,635 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 00:14:03] 2026-01-12 22:20:51,638 | INFO     | fitting pss+swap vs Time
[2026-01-13 00:14:03] 2026-01-12 22:20:51,639 | INFO     | sum of square deviations: 1869302025.5
[2026-01-13 00:14:03] 2026-01-12 22:20:51,640 | INFO     | sum of deviations: -52902647384.50003
[2026-01-13 00:14:03] 2026-01-12 22:20:51,640 | INFO     | mean x: 1768250876.5
[2026-01-13 00:14:03] 2026-01-12 22:20:51,640 | INFO     | mean y: 2458396.60989011
[2026-01-13 00:14:03] 2026-01-12 22:20:51,640 | INFO     | intersect: 50045282579.49773
[2026-01-13 00:14:03] 2026-01-12 22:20:51,640 | INFO     | chi2: 1.4763082952334394
[2026-01-13 00:14:03] 2026-01-12 22:20:51,640 | INFO     | sum of square deviations: 1719429448.0
[2026-01-13 00:14:03] 2026-01-12 22:20:51,641 | INFO     | sum of deviations: -50630525515.00001
[2026-01-13 00:14:03] 2026-01-12 22:20:51,641 | INFO     | mean x: 1768250724.0
[2026-01-13 00:14:03] 2026-01-12 22:20:51,642 | INFO     | mean y: 2460710.8192090397
[2026-01-13 00:14:03] 2026-01-12 22:20:51,642 | INFO     | intersect: 52070583367.747925
[2026-01-13 00:14:03] 2026-01-12 22:20:51,642 | INFO     | chi2: 1.467435535074927
[2026-01-13 00:14:03] 2026-01-12 22:20:51,642 | INFO     | current chi2=1.467435535074927 (change=0.6010099778724982 %)
[2026-01-13 00:14:03] 2026-01-12 22:20:51,642 | INFO     | right removable region: 176
[2026-01-13 00:14:03] 2026-01-12 22:20:51,642 | INFO     | sum of square deviations: 1719429448.0
[2026-01-13 00:14:03] 2026-01-12 22:20:51,643 | INFO     | sum of deviations: -70927091810.00002
[2026-01-13 00:14:03] 2026-01-12 22:20:51,643 | INFO     | mean x: 1768251029.0
[2026-01-13 00:14:03] 2026-01-12 22:20:51,643 | INFO     | mean y: 2476366.2485875706
[2026-01-13 00:14:03] 2026-01-12 22:20:51,644 | INFO     | intersect: 72943476197.84505
[2026-01-13 00:14:03] 2026-01-12 22:20:51,644 | INFO     | chi2: 0.27682086334675376
[2026-01-13 00:14:03] 2026-01-12 22:20:51,644 | INFO     | current chi2=0.27682086334675376 (change=81.24911549704585 %)
[2026-01-13 00:14:03] 2026-01-12 22:20:51,644 | INFO     | sum of square deviations: 1577789583.0
[2026-01-13 00:14:03] 2026-01-12 22:20:51,645 | INFO     | sum of deviations: -64030331709.0
[2026-01-13 00:14:03] 2026-01-12 22:20:51,645 | INFO     | mean x: 1768251181.5
[2026-01-13 00:14:03] 2026-01-12 22:20:51,645 | INFO     | mean y: 2468931.406976744
[2026-01-13 00:14:03] 2026-01-12 22:20:51,645 | INFO     | intersect: 71762170552.0737
[2026-01-13 00:14:03] 2026-01-12 22:20:51,646 | INFO     | chi2: 0.27494084435587457
[2026-01-13 00:14:03] 2026-01-12 22:20:51,646 | INFO     | current chi2=0.27494084435587457 (change=0.6791464227623007 %)
[2026-01-13 00:14:03] 2026-01-12 22:20:51,646 | INFO     | left removable region: 20
[2026-01-13 00:14:03] 2026-01-12 22:20:51,646 | INFO     | sum of square deviations: 1177156955.0
[2026-01-13 00:14:03] 2026-01-12 22:20:51,647 | INFO     | sum of deviations: -46121206228.000015
[2026-01-13 00:14:03] 2026-01-12 22:20:51,647 | INFO     | mean x: 1768251303.5
[2026-01-13 00:14:03] 2026-01-12 22:20:51,647 | INFO     | mean y: 2453298.4615384615
[2026-01-13 00:14:03] 2026-01-12 22:20:51,647 | INFO     | intersect: 69282834886.70381
[2026-01-13 00:14:03] 2026-01-12 22:20:51,648 | INFO     | chi2: 0.24423026914795687
[2026-01-13 00:14:03] 2026-01-12 22:20:51,648 | INFO     | current memory leak: -39.18 B/s (using 156 data points, chi2=0.24)
[2026-01-13 00:14:03] 2026-01-12 22:20:51,648 | INFO     | could have reported an average CPU frequency of 2720 MHz (10 samples)
[2026-01-13 00:14:03] 2026-01-12 22:20:51,648 | INFO     | ..............................
[2026-01-13 00:14:03] 2026-01-12 22:20:51,649 | INFO     | . Timing measurements:
[2026-01-13 00:14:03] 2026-01-12 22:20:51,649 | INFO     | . get job = 0 s
[2026-01-13 00:14:03] 2026-01-12 22:20:51,649 | INFO     | . initial setup = 1 s
[2026-01-13 00:14:03] 2026-01-12 22:20:51,649 | INFO     | . payload setup = 8 s
[2026-01-13 00:14:03] 2026-01-12 22:20:51,649 | INFO     | . stage-in = 0 s
[2026-01-13 00:14:03] 2026-01-12 22:20:51,649 | INFO     | . payload execution = 11089 s
[2026-01-13 00:14:03] 2026-01-12 22:20:51,649 | INFO     | . stage-out = 1 s
[2026-01-13 00:14:03] 2026-01-12 22:20:51,649 | INFO     | . log creation = 0 s
[2026-01-13 00:14:03] 2026-01-12 22:20:51,649 | INFO     | ..............................
[2026-01-13 00:14:03] 2026-01-12 22:20:51,741 | INFO     | 
[2026-01-13 00:14:03] 2026-01-12 22:20:51,742 | INFO     | job summary report
[2026-01-13 00:14:03] 2026-01-12 22:20:51,742 | INFO     | --------------------------------------------------
[2026-01-13 00:14:03] 2026-01-12 22:20:51,742 | INFO     | PanDA job id: 6967236007
[2026-01-13 00:14:03] 2026-01-12 22:20:51,742 | INFO     | task id: 48188648
[2026-01-13 00:14:03] 2026-01-12 22:20:51,742 | INFO     | errors: (none)
[2026-01-13 00:14:03] 2026-01-12 22:20:51,742 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 00:14:03] 2026-01-12 22:20:51,742 | INFO     | pilot state: finished 
[2026-01-13 00:14:03] 2026-01-12 22:20:51,742 | INFO     | transexitcode: 0
[2026-01-13 00:14:03] 2026-01-12 22:20:51,742 | INFO     | exeerrorcode: 0
[2026-01-13 00:14:03] 2026-01-12 22:20:51,742 | INFO     | exeerrordiag: 
[2026-01-13 00:14:03] 2026-01-12 22:20:51,743 | INFO     | exitcode: 0
[2026-01-13 00:14:03] 2026-01-12 22:20:51,743 | INFO     | exitmsg: OK
[2026-01-13 00:14:03] 2026-01-12 22:20:51,743 | INFO     | cpuconsumptiontime: 42687 s
[2026-01-13 00:14:03] 2026-01-12 22:20:51,743 | INFO     | nevents: 400
[2026-01-13 00:14:03] 2026-01-12 22:20:51,743 | INFO     | neventsw: 0
[2026-01-13 00:14:03] 2026-01-12 22:20:51,743 | INFO     | pid: 2762128
[2026-01-13 00:14:03] 2026-01-12 22:20:51,743 | INFO     | pgrp: 2762128
[2026-01-13 00:14:03] 2026-01-12 22:20:51,743 | INFO     | corecount: 4
[2026-01-13 00:14:03] 2026-01-12 22:20:51,743 | INFO     | event service: False
[2026-01-13 00:14:03] 2026-01-12 22:20:51,743 | INFO     | sizes: {0: 2284020, 1: 2284162, 7: 2284424, 11: 2284452, 11102: 2314262, 11103: 2323282, 11104: 2323466, 11111: 2323660}
[2026-01-13 00:14:03] 2026-01-12 22:20:51,744 | INFO     | --------------------------------------------------
[2026-01-13 00:14:03] 2026-01-12 22:20:51,744 | INFO     | 
[2026-01-13 00:14:03] 2026-01-12 22:20:51,744 | INFO     | executing command: ls -lF /scratch/boinc/var/slot80/slots/0
[2026-01-13 00:14:03] 2026-01-12 22:20:51,776 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 00:14:03] 2026-01-12 22:20:51,777 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 00:14:03] 2026-01-12 22:20:51,777 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 00:14:03] 2026-01-12 22:20:51,777 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 00:14:03] 2026-01-12 22:20:51,777 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 00:14:03] 2026-01-12 22:20:51,777 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 00:14:03] 2026-01-12 22:20:51,777 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 00:14:03] 2026-01-12 22:20:51,778 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 00:14:03] 2026-01-12 22:20:51,778 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 00:14:03] 2026-01-12 22:20:51,778 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 00:14:03] 2026-01-12 22:20:51,778 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 00:14:03] 2026-01-12 22:20:51,778 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 00:14:03] 2026-01-12 22:20:51,778 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 00:14:03] 2026-01-12 22:20:51,778 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 00:14:03] 2026-01-12 22:20:51,778 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 00:14:03] 2026-01-12 22:20:51,778 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 00:14:03] 2026-01-12 22:20:51,779 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 00:14:03] 2026-01-12 22:20:51,779 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 00:14:03] 2026-01-12 22:20:51,779 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 00:14:03] 2026-01-12 22:20:51,779 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 00:14:03] 2026-01-12 22:20:51,779 | INFO     | job 6967236007 has completed (purged errors)
[2026-01-13 00:14:03] 2026-01-12 22:20:51,779 | INFO     | overall cleanup function is called
[2026-01-13 00:14:03] 2026-01-12 22:20:52,424 | INFO     | PID=2754251 has CPU usage=16.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-13 00:14:03] 2026-01-12 22:20:52,425 | INFO     | .. there are 6 such processes running
[2026-01-13 00:14:03] 2026-01-12 22:20:52,789 | INFO     | --- collectZombieJob: --- 10, [2762128]
[2026-01-13 00:14:03] 2026-01-12 22:20:52,789 | INFO     | zombie collector waiting for pid 2762128
[2026-01-13 00:14:03] 2026-01-12 22:20:52,789 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 00:14:03] 2026-01-12 22:20:52,790 | INFO     | collected zombie processes
[2026-01-13 00:14:03] 2026-01-12 22:20:52,790 | INFO     | will attempt to kill all subprocesses of pid=2762128
[2026-01-13 00:14:03] 2026-01-12 22:20:53,358 | INFO     | process IDs to be killed: [2762128] (in reverse order)
[2026-01-13 00:14:03] 2026-01-12 22:20:53,603 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 00:14:03] 2026-01-12 22:20:53,603 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 00:14:03] 2026-01-12 22:20:53,634 | INFO     | did not find any defunct processes belonging to 2762128
[2026-01-13 00:14:03] 2026-01-12 22:20:53,663 | INFO     | did not find any defunct processes belonging to 2762128
[2026-01-13 00:14:03] 2026-01-12 22:20:53,663 | INFO     | ready for new job
[2026-01-13 00:14:03] 2026-01-12 22:20:53,663 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 00:14:03] 2026-01-12 22:20:53,666 | INFO     | ***************************************
[2026-01-13 00:14:03] 2026-01-12 22:20:53,666 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 00:14:03] 2026-01-12 22:20:53,666 | INFO     | ***************************************
[2026-01-13 00:14:03] 2026-01-12 22:20:53,666 | INFO     | 
[2026-01-13 00:14:03] 2026-01-12 22:20:53,674 | INFO     | architecture information:
[2026-01-13 00:14:03] 2026-01-12 22:20:53,675 | INFO     | executing command: cat /etc/os-release
[2026-01-13 00:14:03] 2026-01-12 22:20:53,701 | INFO     | cat /etc/os-release:
[2026-01-13 00:14:03] NAME="CentOS Linux"
[2026-01-13 00:14:03] VERSION="7 (Core)"
[2026-01-13 00:14:03] ID="centos"
[2026-01-13 00:14:03] ID_LIKE="rhel fedora"
[2026-01-13 00:14:03] VERSION_ID="7"
[2026-01-13 00:14:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 00:14:03] ANSI_COLOR="0;31"
[2026-01-13 00:14:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 00:14:03] HOME_URL="https://www.centos.org/"
[2026-01-13 00:14:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 00:14:03] 
[2026-01-13 00:14:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 00:14:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 00:14:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 00:14:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 00:14:03] 
[2026-01-13 00:14:03] 2026-01-12 22:20:53,702 | INFO     | ***************************************
[2026-01-13 00:14:03] 2026-01-12 22:20:54,204 | INFO     | executing command: df -mP /scratch/boinc/var/slot80/slots/0
[2026-01-13 00:14:03] 2026-01-12 22:20:54,228 | INFO     | sufficient remaining disk space (3357413474304 B)
[2026-01-13 00:14:03] 2026-01-12 22:20:54,228 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 00:14:03] 2026-01-12 22:20:54,228 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 00:14:03] 2026-01-12 22:20:54,229 | INFO     | update_server=False
[2026-01-13 00:14:03] 2026-01-12 22:20:54,229 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 00:14:03] 2026-01-12 22:20:54,299 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 00:14:03] 2026-01-12 22:20:54,494 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-13 00:14:03] 2026-01-12 22:20:54,494 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-13 00:14:03] 2026-01-12 22:20:54,494 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 00:14:03] 2026-01-12 22:20:54,495 | INFO     | will abort loop
[2026-01-13 00:14:03] 2026-01-12 22:20:55,072 | INFO     | all data control threads have been joined
[2026-01-13 00:14:03] 2026-01-12 22:20:55,115 | INFO     | all payload control threads have been joined
[2026-01-13 00:14:03] 2026-01-12 22:20:55,200 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 00:14:03] 2026-01-12 22:20:55,234 | INFO     | [job] retrieve thread has finished
[2026-01-13 00:14:03] 2026-01-12 22:20:55,274 | INFO     | all job control threads have been joined
[2026-01-13 00:14:03] 2026-01-12 22:20:55,330 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 00:14:03] 2026-01-12 22:20:55,422 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 00:14:03] 2026-01-12 22:20:55,499 | INFO     | [job] job monitor thread has finished
[2026-01-13 00:14:03] 2026-01-12 22:20:55,566 | INFO     | [payload] failed_post thread has finished
[2026-01-13 00:14:03] 2026-01-12 22:20:55,900 | INFO     | [data] copytool_in thread has finished
[2026-01-13 00:14:03] 2026-01-12 22:20:56,077 | INFO     | [data] control thread has finished
[2026-01-13 00:14:03] 2026-01-12 22:20:56,121 | INFO     | [payload] control thread has finished
[2026-01-13 00:14:03] 2026-01-12 22:20:56,279 | INFO     | [job] control thread has finished
[2026-01-13 00:14:03] 2026-01-12 22:20:56,304 | INFO     | [data] copytool_out thread has finished
[2026-01-13 00:14:03] 2026-01-12 22:20:56,338 | INFO     | [job] validate thread has finished
[2026-01-13 00:14:03] 2026-01-12 22:20:56,393 | INFO     | [payload] validate_post thread has finished
[2026-01-13 00:14:03] 2026-01-12 22:20:56,682 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 00:14:03] 2026-01-12 22:20:56,751 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 00:14:03] 2026-01-12 22:20:57,757 | INFO     | [job] queue monitor thread has finished
[2026-01-13 00:14:03] 2026-01-12 22:20:59,206 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 00:14:03] 2026-01-12 22:21:05,044 | INFO     | job.realtimelogging is not enabled
[2026-01-13 00:14:03] 2026-01-12 22:21:06,050 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 00:14:03] 2026-01-12 22:21:25,272 | INFO     | PID=2754251 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 00:14:03] 2026-01-12 22:21:25,272 | INFO     | .. there are 6 such processes running
[2026-01-13 00:14:03] 2026-01-12 22:21:25,275 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 00:14:03] 2026-01-12 22:21:25,275 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 00:14:03] 2026-01-12 22:21:25,275 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 00:14:03] 2026-01-12 22:21:38,818 | INFO     | [monitor] cgroup control has ended
[2026-01-13 00:14:03] 2026-01-12 22:21:39,592 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23407041234752)>', '<ExcThread(monitor, started 23406799972096)>']
[2026-01-13 00:14:03] 2026-01-12 22:21:40,352 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 00:14:03] 2026-01-12 22:21:40,352 | INFO     | [monitor] control thread has ended
[2026-01-13 00:14:03] 2026-01-12 22:21:44,618 | INFO     | all workflow threads have been joined
[2026-01-13 00:14:03] 2026-01-12 22:21:44,619 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 00:14:03] 2026-01-12 22:21:44,619 | INFO     | traces error code: 0
[2026-01-13 00:14:03] 2026-01-12 22:21:44,619 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 00:14:03] 2026-01-12 22:21:44,758 [wrapper] ==== pilot stdout END ====
[2026-01-13 00:14:03] 2026-01-12 22:21:44,762 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 00:14:03] 2026-01-12 22:21:44,765 [wrapper] pilotpid: 2754251
[2026-01-13 00:14:03] 2026-01-12 22:21:44,769 [wrapper] Pilot exit status: 0
[2026-01-13 00:14:03] 2026-01-12 22:21:44,783 [wrapper] pandaids: 6967236007
[2026-01-13 00:14:03] 2026-01-12 22:21:44,930 [wrapper] cleanup supervisor_pilot 3035665 2754252
[2026-01-13 00:14:03] 2026-01-12 22:21:44,935 [wrapper] Test setup, not cleaning
[2026-01-13 00:14:03] 2026-01-12 22:21:44,939 [wrapper] apfmon messages muted
[2026-01-13 00:14:03] 2026-01-12 22:21:44,943 [wrapper] ==== wrapper stdout END ====
[2026-01-13 00:14:03] 2026-01-12 22:21:44,946 [wrapper] ==== wrapper stderr END ====
[2026-01-13 00:14:03]  *** Error codes and diagnostics ***
[2026-01-13 00:14:03]     "exeErrorCode": 0,
[2026-01-13 00:14:03]     "exeErrorDiag": "",
[2026-01-13 00:14:03]     "pilotErrorCode": 0,
[2026-01-13 00:14:03]     "pilotErrorDiag": "",
[2026-01-13 00:14:03]  *** Listing of results directory ***
[2026-01-13 00:14:03] total 567120
[2026-01-13 00:14:03] -rw-r--r-- 1 boinc boinc    579449 Jan 12 17:03 pilot3.tar.gz
[2026-01-13 00:14:03] -rw-r--r-- 1 boinc boinc      5112 Jan 12 17:43 queuedata.json
[2026-01-13 00:14:03] -rwx------ 1 boinc boinc     36322 Jan 12 17:44 runpilot2-wrapper.sh
[2026-01-13 00:14:03] -rw-r--r-- 1 boinc boinc       100 Jan 12 20:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 00:14:03] -rwxr-xr-x 1 boinc boinc      7986 Jan 12 20:15 run_atlas
[2026-01-13 00:14:03] -rw-r--r-- 1 boinc boinc       105 Jan 12 20:15 job.xml
[2026-01-13 00:14:03] -rw-r--r-- 2 boinc boinc 309238205 Jan 12 20:15 EVNT.48188646._000002.pool.root.1
[2026-01-13 00:14:03] -rw-r--r-- 1 boinc boinc      6689 Jan 12 20:15 init_data.xml
[2026-01-13 00:14:03] -rw-r--r-- 2 boinc boinc     15847 Jan 12 20:15 start_atlas.sh
[2026-01-13 00:14:03] drwxrwx--x 2 boinc boinc      4096 Jan 12 20:15 shared
[2026-01-13 00:14:03] -rw-r--r-- 2 boinc boinc    592405 Jan 12 20:15 input.tar.gz
[2026-01-13 00:14:03] -rw-r--r-- 1 boinc boinc         0 Jan 12 20:15 boinc_lockfile
[2026-01-13 00:14:03] -rw-r--r-- 1 boinc boinc      2631 Jan 12 20:15 pandaJob.out
[2026-01-13 00:14:03] -rw------- 1 boinc boinc    988539 Jan 12 20:15 agis_schedconf.cvmfs.json
[2026-01-13 00:14:03] drwx------ 5 boinc boinc      4096 Jan 12 20:15 pilot3
[2026-01-13 00:14:03] -rw------- 1 boinc boinc 263649144 Jan 12 23:20 HITS.48188648._000094.pool.root.1
[2026-01-13 00:14:03] -rw-r--r-- 1 boinc boinc       528 Jan 12 23:20 boinc_task_state.xml
[2026-01-13 00:14:03] -rw------- 1 boinc boinc      1023 Jan 12 23:20 memory_monitor_summary.json
[2026-01-13 00:14:03] -rw------- 1 boinc boinc   1516240 Jan 12 23:20 agis_ddmendpoints.agis.ALL.json
[2026-01-13 00:14:03] -rw------- 1 boinc boinc    403484 Jan 12 23:20 log.48188648._000094.job.log.tgz.1
[2026-01-13 00:14:03] -rw------- 1 boinc boinc      7777 Jan 12 23:20 heartbeat.json
[2026-01-13 00:14:03] -rw------- 1 boinc boinc        95 Jan 12 23:21 pilot_heartbeat.json
[2026-01-13 00:14:03] -rw------- 1 boinc boinc      5092 Jan 12 23:21 pilotlog.txt
[2026-01-13 00:14:03] -rw------- 1 boinc boinc   1560556 Jan 12 23:21 log.48188648._000094.job.log.1
[2026-01-13 00:14:03] -rw------- 1 boinc boinc       357 Jan 12 23:21 output.list
[2026-01-13 00:14:03] -rw-r--r-- 1 boinc boinc       620 Jan 12 23:21 runtime_log
[2026-01-13 00:14:03] -rw------- 1 boinc boinc   1986560 Jan 12 23:21 result.tar.gz
[2026-01-13 00:14:03] -rw-r--r-- 1 boinc boinc      9206 Jan 12 23:21 runtime_log.err
[2026-01-13 00:14:03] -rw------- 1 boinc boinc       665 Jan 12 23:21 JQmKDmYCaz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnjnKDmDS3xbn.diag
[2026-01-13 00:14:03] -rw-r--r-- 1 boinc boinc        26 Jan 13 00:13 wrapper_checkpoint.txt
[2026-01-13 00:14:03] -rw-r--r-- 1 boinc boinc      8192 Jan 13 00:14 boinc_mmap_file
[2026-01-13 00:14:03] -rw-r--r-- 1 boinc boinc     21144 Jan 13 00:14 stderr.txt
[2026-01-13 00:14:03] HITS file was successfully produced:
[2026-01-13 00:14:03] -rw------- 1 boinc boinc 263649144 Jan 12 23:20 shared/HITS.pool.root.1
[2026-01-13 00:14:03]  *** Contents of shared directory: ***
[2026-01-13 00:14:03] total 562008
[2026-01-13 00:14:03] -rw-r--r-- 2 boinc boinc 309238205 Jan 12 20:15 ATLAS.root_0
[2026-01-13 00:14:03] -rw-r--r-- 2 boinc boinc     15847 Jan 12 20:15 start_atlas.sh
[2026-01-13 00:14:03] -rw-r--r-- 2 boinc boinc    592405 Jan 12 20:15 input.tar.gz
[2026-01-13 00:14:03] -rw------- 1 boinc boinc 263649144 Jan 12 23:20 HITS.pool.root.1
[2026-01-13 00:14:03] -rw------- 1 boinc boinc   1986560 Jan 12 23:21 result.tar.gz
00:14:04 (2750141): run_atlas exited; CPU time 43380.899729
00:14:04 (2750141): called boinc_finish(0)

</stderr_txt>
]]>

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