Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:05:39 (6601): wrapper (7.7.26015): starting
01:05:39 (6601): wrapper: running run_atlas (--nthreads 8)
[2026-01-14 01:05:39] Arguments: --nthreads 8
[2026-01-14 01:05:39] Threads: 8
[2026-01-14 01:05:39] Checking for CVMFS
[2026-01-14 01:05:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-14 01:05:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-14 01:05:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-14 01:05:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-14 01:05:42] 2.11.2.0 15502 41855 129888 155111 1 72 14460414 25165824 96 130560 0 18072232 99.858 10263647 3245 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-14 01:05:42] CVMFS is ok
[2026-01-14 01:05:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-14 01:05:42] Checking for apptainer binary...
[2026-01-14 01:05:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-14 01:05:42] Running /usr/bin/apptainer --version
[2026-01-14 01:05:42] apptainer version 1.3.2-1.el7
[2026-01-14 01:05:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-14 01:06:07] cg-vwn488.simple-grid.lan
[2026-01-14 01:06:07] apptainer works
[2026-01-14 01:06:07] Set ATHENA_PROC_NUMBER=8
[2026-01-14 01:06:07] Set ATHENA_CORE_NUMBER=8
[2026-01-14 01:06:07] Starting ATLAS job with PandaID=6967236073
[2026-01-14 01:06:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-14 06:10:04]  *** The last 200 lines of the pilot log: ***
[2026-01-14 06:10:04] 2026-01-14 05:09:15,480 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-14 06:10:04] 2026-01-14 05:09:15,480 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-14 06:10:04] 2026-01-14 05:09:15,486 | INFO     | fitting pss+swap vs Time
[2026-01-14 06:10:04] 2026-01-14 05:09:15,487 | INFO     | sum of square deviations: 7028008982.0
[2026-01-14 06:10:04] 2026-01-14 05:09:15,490 | INFO     | sum of deviations: 128637772095.9998
[2026-01-14 06:10:04] 2026-01-14 05:09:15,490 | INFO     | mean x: 1768358576.0
[2026-01-14 06:10:04] 2026-01-14 05:09:15,490 | INFO     | mean y: 2517812.5795053
[2026-01-14 06:10:04] 2026-01-14 05:09:15,490 | INFO     | intersect: -32364786791.911785
[2026-01-14 06:10:04] 2026-01-14 05:09:15,491 | INFO     | chi2: 8.052258361597662
[2026-01-14 06:10:04] 2026-01-14 05:09:15,491 | INFO     | sum of square deviations: 6662039329.5
[2026-01-14 06:10:04] 2026-01-14 05:09:15,494 | INFO     | sum of deviations: 126161601078.49995
[2026-01-14 06:10:04] 2026-01-14 05:09:15,494 | INFO     | mean x: 1768358423.5
[2026-01-14 06:10:04] 2026-01-14 05:09:15,500 | INFO     | mean y: 2516781.809352518
[2026-01-14 06:10:04] 2026-01-14 05:09:15,500 | INFO     | intersect: -33485566814.682434
[2026-01-14 06:10:04] 2026-01-14 05:09:15,501 | INFO     | chi2: 8.06426364790941
[2026-01-14 06:10:04] 2026-01-14 05:09:15,501 | INFO     | current chi2=8.06426364790941 (change=-0.14909216486399376 %)
[2026-01-14 06:10:04] 2026-01-14 05:09:15,501 | INFO     | right removable region: 277
[2026-01-14 06:10:04] 2026-01-14 05:09:15,502 | INFO     | sum of square deviations: 6662039329.5
[2026-01-14 06:10:04] 2026-01-14 05:09:15,504 | INFO     | sum of deviations: 26573947219.000004
[2026-01-14 06:10:04] 2026-01-14 05:09:15,504 | INFO     | mean x: 1768358728.5
[2026-01-14 06:10:04] 2026-01-14 05:09:15,504 | INFO     | mean y: 2560320.2589928056
[2026-01-14 06:10:04] 2026-01-14 05:09:15,504 | INFO     | intersect: -7051176409.773765
[2026-01-14 06:10:04] 2026-01-14 05:09:15,505 | INFO     | chi2: 2.974664867597192
[2026-01-14 06:10:04] 2026-01-14 05:09:15,505 | INFO     | current chi2=2.974664867597192 (change=63.058005170527295 %)
[2026-01-14 06:10:04] 2026-01-14 05:09:15,506 | INFO     | sum of square deviations: 6309000152.0
[2026-01-14 06:10:04] 2026-01-14 05:09:15,508 | INFO     | sum of deviations: -48176591529.0
[2026-01-14 06:10:04] 2026-01-14 05:09:15,508 | INFO     | mean x: 1768358881.0
[2026-01-14 06:10:04] 2026-01-14 05:09:15,508 | INFO     | mean y: 2592560.7875457876
[2026-01-14 06:10:04] 2026-01-14 05:09:15,508 | INFO     | intersect: 13506079870.042015
[2026-01-14 06:10:04] 2026-01-14 05:09:15,509 | INFO     | chi2: 0.36756197164082277
[2026-01-14 06:10:04] 2026-01-14 05:09:15,509 | INFO     | current chi2=0.36756197164082277 (change=87.64358379847597 %)
[2026-01-14 06:10:04] 2026-01-14 05:09:15,510 | INFO     | sum of square deviations: 5968658887.0
[2026-01-14 06:10:04] 2026-01-14 05:09:15,512 | INFO     | sum of deviations: -60960834004.50001
[2026-01-14 06:10:04] 2026-01-14 05:09:15,512 | INFO     | mean x: 1768359033.5
[2026-01-14 06:10:04] 2026-01-14 05:09:15,512 | INFO     | mean y: 2598259.3097014925
[2026-01-14 06:10:04] 2026-01-14 05:09:15,513 | INFO     | intersect: 18063714423.335438
[2026-01-14 06:10:04] 2026-01-14 05:09:15,513 | INFO     | chi2: 0.2392166551522891
[2026-01-14 06:10:04] 2026-01-14 05:09:15,513 | INFO     | current chi2=0.2392166551522891 (change=34.91800740854421 %)
[2026-01-14 06:10:04] 2026-01-14 05:09:15,514 | INFO     | sum of square deviations: 5640782972.0
[2026-01-14 06:10:04] 2026-01-14 05:09:15,516 | INFO     | sum of deviations: -55201327800.00001
[2026-01-14 06:10:04] 2026-01-14 05:09:15,516 | INFO     | mean x: 1768359186.0
[2026-01-14 06:10:04] 2026-01-14 05:09:15,516 | INFO     | mean y: 2595575.783269962
[2026-01-14 06:10:04] 2026-01-14 05:09:15,516 | INFO     | intersect: 17307954703.953465
[2026-01-14 06:10:04] 2026-01-14 05:09:15,517 | INFO     | chi2: 0.23653118276794968
[2026-01-14 06:10:04] 2026-01-14 05:09:15,517 | INFO     | current chi2=0.23653118276794968 (change=1.1226109580998036 %)
[2026-01-14 06:10:04] 2026-01-14 05:09:15,523 | INFO     | left removable region: 40
[2026-01-14 06:10:04] 2026-01-14 05:09:15,524 | INFO     | sum of square deviations: 4127772278.0
[2026-01-14 06:10:04] 2026-01-14 05:09:15,526 | INFO     | sum of deviations: -20300703559.000004
[2026-01-14 06:10:04] 2026-01-14 05:09:15,526 | INFO     | mean x: 1768359613.0
[2026-01-14 06:10:04] 2026-01-14 05:09:15,526 | INFO     | mean y: 2577777.35443038
[2026-01-14 06:10:04] 2026-01-14 05:09:15,526 | INFO     | intersect: 8699507227.787882
[2026-01-14 06:10:04] 2026-01-14 05:09:15,527 | INFO     | chi2: 0.15684346929516038
[2026-01-14 06:10:04] 2026-01-14 05:09:15,527 | INFO     | current memory leak: -4.92 B/s (using 237 data points, chi2=0.16)
[2026-01-14 06:10:04] 2026-01-14 05:09:15,527 | INFO     | could have reported an average CPU frequency of 2249 MHz (13 samples)
[2026-01-14 06:10:04] 2026-01-14 05:09:15,528 | INFO     | ..............................
[2026-01-14 06:10:04] 2026-01-14 05:09:15,528 | INFO     | . Timing measurements:
[2026-01-14 06:10:04] 2026-01-14 05:09:15,528 | INFO     | . get job = 0 s
[2026-01-14 06:10:04] 2026-01-14 05:09:15,528 | INFO     | . initial setup = 6 s
[2026-01-14 06:10:04] 2026-01-14 05:09:15,528 | INFO     | . payload setup = 155 s
[2026-01-14 06:10:04] 2026-01-14 05:09:15,528 | INFO     | . stage-in = 0 s
[2026-01-14 06:10:04] 2026-01-14 05:09:15,528 | INFO     | . payload execution = 17422 s
[2026-01-14 06:10:04] 2026-01-14 05:09:15,528 | INFO     | . stage-out = 3 s
[2026-01-14 06:10:04] 2026-01-14 05:09:15,528 | INFO     | . log creation = 0 s
[2026-01-14 06:10:04] 2026-01-14 05:09:15,529 | INFO     | ..............................
[2026-01-14 06:10:04] 2026-01-14 05:09:15,677 | INFO     | 
[2026-01-14 06:10:04] 2026-01-14 05:09:15,677 | INFO     | job summary report
[2026-01-14 06:10:04] 2026-01-14 05:09:15,677 | INFO     | --------------------------------------------------
[2026-01-14 06:10:04] 2026-01-14 05:09:15,678 | INFO     | PanDA job id: 6967236073
[2026-01-14 06:10:04] 2026-01-14 05:09:15,678 | INFO     | task id: 48188648
[2026-01-14 06:10:04] 2026-01-14 05:09:15,678 | INFO     | errors: (none)
[2026-01-14 06:10:04] 2026-01-14 05:09:15,678 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-14 06:10:04] 2026-01-14 05:09:15,678 | INFO     | pilot state: finished 
[2026-01-14 06:10:04] 2026-01-14 05:09:15,678 | INFO     | transexitcode: 0
[2026-01-14 06:10:04] 2026-01-14 05:09:15,678 | INFO     | exeerrorcode: 0
[2026-01-14 06:10:04] 2026-01-14 05:09:15,678 | INFO     | exeerrordiag: 
[2026-01-14 06:10:04] 2026-01-14 05:09:15,678 | INFO     | exitcode: 0
[2026-01-14 06:10:04] 2026-01-14 05:09:15,679 | INFO     | exitmsg: OK
[2026-01-14 06:10:04] 2026-01-14 05:09:15,679 | INFO     | cpuconsumptiontime: 64993 s
[2026-01-14 06:10:04] 2026-01-14 05:09:15,679 | INFO     | nevents: 400
[2026-01-14 06:10:04] 2026-01-14 05:09:15,679 | INFO     | neventsw: 0
[2026-01-14 06:10:04] 2026-01-14 05:09:15,679 | INFO     | pid: 16839
[2026-01-14 06:10:04] 2026-01-14 05:09:15,679 | INFO     | pgrp: 16839
[2026-01-14 06:10:04] 2026-01-14 05:09:15,679 | INFO     | corecount: 8
[2026-01-14 06:10:04] 2026-01-14 05:09:15,679 | INFO     | event service: False
[2026-01-14 06:10:04] 2026-01-14 05:09:15,679 | INFO     | sizes: {0: 2283299, 1: 2283984, 2: 2284183, 12: 2284183, 23: 2284211, 34: 2284239, 45: 2284395, 55: 2284423, 66: 2284451, 77: 2284479, 87: 2284535, 98: 2284843, 10
[2026-01-14 06:10:04] 2026-01-14 05:09:15,679 | INFO     | --------------------------------------------------
[2026-01-14 06:10:04] 2026-01-14 05:09:15,679 | INFO     | 
[2026-01-14 06:10:04] 2026-01-14 05:09:15,680 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-14 06:10:04] 2026-01-14 05:09:16,194 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-14 06:10:04] 2026-01-14 05:09:16,194 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-14 06:10:04] 2026-01-14 05:09:16,194 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-14 06:10:04] 2026-01-14 05:09:16,194 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-14 06:10:04] 2026-01-14 05:09:16,194 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-14 06:10:04] 2026-01-14 05:09:16,194 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-14 06:10:04] 2026-01-14 05:09:16,194 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-14 06:10:04] 2026-01-14 05:09:16,195 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-14 06:10:04] 2026-01-14 05:09:16,195 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-14 06:10:04] 2026-01-14 05:09:16,195 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-14 06:10:04] 2026-01-14 05:09:16,195 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-14 06:10:04] 2026-01-14 05:09:16,195 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-14 06:10:04] 2026-01-14 05:09:16,195 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-14 06:10:04] 2026-01-14 05:09:16,195 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-14 06:10:04] 2026-01-14 05:09:16,195 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-14 06:10:04] 2026-01-14 05:09:16,195 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-14 06:10:04] 2026-01-14 05:09:16,196 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-14 06:10:04] 2026-01-14 05:09:16,196 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-14 06:10:04] 2026-01-14 05:09:16,196 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-14 06:10:04] 2026-01-14 05:09:16,196 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-14 06:10:04] 2026-01-14 05:09:16,196 | INFO     | job 6967236073 has completed (purged errors)
[2026-01-14 06:10:04] 2026-01-14 05:09:16,196 | INFO     | overall cleanup function is called
[2026-01-14 06:10:04] 2026-01-14 05:09:17,205 | INFO     | --- collectZombieJob: --- 10, [16839]
[2026-01-14 06:10:04] 2026-01-14 05:09:17,205 | INFO     | zombie collector waiting for pid 16839
[2026-01-14 06:10:04] 2026-01-14 05:09:17,205 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-14 06:10:04] 2026-01-14 05:09:17,206 | INFO     | collected zombie processes
[2026-01-14 06:10:04] 2026-01-14 05:09:17,206 | INFO     | will attempt to kill all subprocesses of pid=16839
[2026-01-14 06:10:04] 2026-01-14 05:09:17,289 | INFO     | process IDs to be killed: [16839] (in reverse order)
[2026-01-14 06:10:04] 2026-01-14 05:09:18,085 | WARNING  | found no corresponding commands to process id(s)
[2026-01-14 06:10:04] 2026-01-14 05:09:18,085 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-14 06:10:04] 2026-01-14 05:09:18,087 | INFO     | did not find any defunct processes belonging to 16839
[2026-01-14 06:10:04] 2026-01-14 05:09:18,089 | INFO     | did not find any defunct processes belonging to 16839
[2026-01-14 06:10:04] 2026-01-14 05:09:18,089 | INFO     | ready for new job
[2026-01-14 06:10:04] 2026-01-14 05:09:18,089 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-14 06:10:04] 2026-01-14 05:09:18,091 | INFO     | ***************************************
[2026-01-14 06:10:04] 2026-01-14 05:09:18,092 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-14 06:10:04] 2026-01-14 05:09:18,092 | INFO     | ***************************************
[2026-01-14 06:10:04] 2026-01-14 05:09:18,092 | INFO     | 
[2026-01-14 06:10:04] 2026-01-14 05:09:18,092 | INFO     | pilot is running in a VM
[2026-01-14 06:10:04] 2026-01-14 05:09:18,092 | INFO     | architecture information:
[2026-01-14 06:10:04] 2026-01-14 05:09:18,106 | INFO     | executing command: cat /etc/os-release
[2026-01-14 06:10:04] 2026-01-14 05:09:18,295 | INFO     | cat /etc/os-release:
[2026-01-14 06:10:04] NAME="CentOS Linux"
[2026-01-14 06:10:04] VERSION="7 (Core)"
[2026-01-14 06:10:04] ID="centos"
[2026-01-14 06:10:04] ID_LIKE="rhel fedora"
[2026-01-14 06:10:04] VERSION_ID="7"
[2026-01-14 06:10:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-14 06:10:04] ANSI_COLOR="0;31"
[2026-01-14 06:10:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-14 06:10:04] HOME_URL="https://www.centos.org/"
[2026-01-14 06:10:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-14 06:10:04] 
[2026-01-14 06:10:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-14 06:10:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-14 06:10:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-14 06:10:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-14 06:10:04] 
[2026-01-14 06:10:04] 2026-01-14 05:09:18,296 | INFO     | ***************************************
[2026-01-14 06:10:04] 2026-01-14 05:09:18,799 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-14 06:10:04] 2026-01-14 05:09:19,002 | INFO     | sufficient remaining disk space (496666411008 B)
[2026-01-14 06:10:04] 2026-01-14 05:09:19,002 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-14 06:10:04] 2026-01-14 05:09:19,002 | INFO     | current server update state: UPDATING_FINAL
[2026-01-14 06:10:04] 2026-01-14 05:09:19,002 | INFO     | update_server=False
[2026-01-14 06:10:04] 2026-01-14 05:09:19,002 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-14 06:10:04] 2026-01-14 05:09:19,003 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-14 06:10:04] 2026-01-14 05:09:19,003 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-14 06:10:04] 2026-01-14 05:09:19,003 | INFO     | aborting loop
[2026-01-14 06:10:04] 2026-01-14 05:09:19,903 | INFO     | all payload control threads have been joined
[2026-01-14 06:10:04] 2026-01-14 05:09:20,008 | INFO     | [job] retrieve thread has finished
[2026-01-14 06:10:04] 2026-01-14 05:09:20,009 | INFO     | [job] job monitor thread has finished
[2026-01-14 06:10:04] 2026-01-14 05:09:20,100 | INFO     | all data control threads have been joined
[2026-01-14 06:10:04] 2026-01-14 05:09:20,126 | INFO     | [payload] failed_post thread has finished
[2026-01-14 06:10:04] 2026-01-14 05:09:20,156 | INFO     | [payload] validate_post thread has finished
[2026-01-14 06:10:04] 2026-01-14 05:09:20,222 | INFO     | all job control threads have been joined
[2026-01-14 06:10:04] 2026-01-14 05:09:20,424 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-14 06:10:04] 2026-01-14 05:09:20,658 | INFO     | [data] copytool_in thread has finished
[2026-01-14 06:10:04] 2026-01-14 05:09:20,693 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-14 06:10:04] 2026-01-14 05:09:20,772 | INFO     | [payload] validate_pre thread has finished
[2026-01-14 06:10:04] 2026-01-14 05:09:20,909 | INFO     | [payload] control thread has finished
[2026-01-14 06:10:04] 2026-01-14 05:09:21,009 | INFO     | [data] copytool_out thread has finished
[2026-01-14 06:10:04] 2026-01-14 05:09:21,062 | INFO     | [job] create_data_payload thread has finished
[2026-01-14 06:10:04] 2026-01-14 05:09:21,106 | INFO     | [data] control thread has finished
[2026-01-14 06:10:04] 2026-01-14 05:09:21,146 | INFO     | [job] validate thread has finished
[2026-01-14 06:10:04] 2026-01-14 05:09:21,193 | INFO     | [payload] execute_payloads thread has finished
[2026-01-14 06:10:04] 2026-01-14 05:09:21,228 | INFO     | [job] control thread has finished
[2026-01-14 06:10:04] 2026-01-14 05:09:21,509 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-14 06:10:04] 2026-01-14 05:09:21,699 | INFO     | [job] queue monitor thread has finished
[2026-01-14 06:10:04] 2026-01-14 05:09:25,518 | INFO     | [data] queue_monitor thread has finished
[2026-01-14 06:10:04] 2026-01-14 05:09:47,511 | INFO     | PID=10327 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-14 06:10:04] 2026-01-14 05:09:47,511 | INFO     | .. there are 2 such processes running
[2026-01-14 06:10:04] 2026-01-14 05:09:47,511 | INFO     | found 0 job(s) in 20 queues
[2026-01-14 06:10:04] 2026-01-14 05:09:47,511 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-14 06:10:04] 2026-01-14 05:09:47,511 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-14 06:10:04] 2026-01-14 05:09:52,805 | INFO     | [monitor] cgroup control has ended
[2026-01-14 06:10:04] 2026-01-14 05:09:53,376 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140018876274496)>', '<ExcThread(monitor, started 140018140047104)>']
[2026-01-14 06:10:04] 2026-01-14 05:09:53,547 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-14 06:10:04] 2026-01-14 05:09:53,547 | INFO     | [monitor] control thread has ended
[2026-01-14 06:10:04] 2026-01-14 05:09:58,402 | INFO     | all workflow threads have been joined
[2026-01-14 06:10:04] 2026-01-14 05:09:58,402 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-14 06:10:04] 2026-01-14 05:09:58,403 | INFO     | traces error code: 0
[2026-01-14 06:10:04] 2026-01-14 05:09:58,403 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-14 06:10:04] 2026-01-14 05:09:58,699 [wrapper] ==== pilot stdout END ====
[2026-01-14 06:10:04] 2026-01-14 05:09:58,805 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-14 06:10:04] 2026-01-14 05:09:58,912 [wrapper] pilotpid: 10327
[2026-01-14 06:10:04] 2026-01-14 05:09:59,026 [wrapper] Pilot exit status: 0
[2026-01-14 06:10:04] 2026-01-14 05:09:59,561 [wrapper] pandaids: 6967236073
[2026-01-14 06:10:04] 2026-01-14 05:10:00,591 [wrapper] cleanup supervisor_pilot 10828 10328
[2026-01-14 06:10:04] 2026-01-14 05:10:00,681 [wrapper] Test setup, not cleaning
[2026-01-14 06:10:04] 2026-01-14 05:10:00,761 [wrapper] apfmon messages muted
[2026-01-14 06:10:04] 2026-01-14 05:10:00,881 [wrapper] ==== wrapper stdout END ====
[2026-01-14 06:10:04] 2026-01-14 05:10:00,950 [wrapper] ==== wrapper stderr END ====
[2026-01-14 06:10:04]  *** Error codes and diagnostics ***
[2026-01-14 06:10:04]     "exeErrorCode": 0,
[2026-01-14 06:10:04]     "exeErrorDiag": "",
[2026-01-14 06:10:04]     "pilotErrorCode": 0,
[2026-01-14 06:10:04]     "pilotErrorDiag": "",
[2026-01-14 06:10:04]  *** Listing of results directory ***
[2026-01-14 06:10:04] total 556376
[2026-01-14 06:10:04] -rw-r--r--. 1 boinc boinc    579449 Jan 12 17:03 pilot3.tar.gz
[2026-01-14 06:10:04] -rw-r--r--. 1 boinc boinc      5112 Jan 12 17:38 queuedata.json
[2026-01-14 06:10:04] -rwx------. 1 boinc boinc     36322 Jan 12 17:42 runpilot2-wrapper.sh
[2026-01-14 06:10:04] -rw-r--r--. 1 boinc boinc       100 Jan 14 01:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-14 06:10:04] -rwxr-xr-x. 1 boinc boinc      7986 Jan 14 01:05 run_atlas
[2026-01-14 06:10:04] -rw-r--r--. 1 boinc boinc       105 Jan 14 01:05 job.xml
[2026-01-14 06:10:04] -rw-r--r--. 1 boinc boinc      6390 Jan 14 01:05 init_data.xml
[2026-01-14 06:10:04] -rw-r--r--. 2 boinc boinc 309761174 Jan 14 01:05 EVNT.48188646._000005.pool.root.1
[2026-01-14 06:10:04] -rw-r--r--. 2 boinc boinc     15847 Jan 14 01:05 start_atlas.sh
[2026-01-14 06:10:04] drwxrwx--x. 2 boinc boinc        68 Jan 14 01:05 shared
[2026-01-14 06:10:04] -rw-r--r--. 2 boinc boinc    592409 Jan 14 01:05 input.tar.gz
[2026-01-14 06:10:04] -rw-r--r--. 1 boinc boinc         0 Jan 14 01:05 boinc_lockfile
[2026-01-14 06:10:04] -rw-r--r--. 1 boinc boinc      2633 Jan 14 01:06 pandaJob.out
[2026-01-14 06:10:04] -rw-------. 1 boinc boinc    997218 Jan 14 01:10 agis_schedconf.cvmfs.json
[2026-01-14 06:10:04] drwx------. 5 boinc boinc      4096 Jan 14 01:10 pilot3
[2026-01-14 06:10:04] -rw-------. 1 boinc boinc 250202179 Jan 14 06:06 HITS.48188648._000160.pool.root.1
[2026-01-14 06:10:04] -rw-r--r--. 1 boinc boinc       531 Jan 14 06:06 boinc_task_state.xml
[2026-01-14 06:10:04] -rw-------. 1 boinc boinc      1012 Jan 14 06:07 memory_monitor_summary.json
[2026-01-14 06:10:04] -rw-------. 1 boinc boinc   1516246 Jan 14 06:07 agis_ddmendpoints.agis.ALL.json
[2026-01-14 06:10:04] -rw-------. 1 boinc boinc    538267 Jan 14 06:07 log.48188648._000160.job.log.tgz.1
[2026-01-14 06:10:04] -rw-------. 1 boinc boinc        95 Jan 14 06:09 pilot_heartbeat.json
[2026-01-14 06:10:04] -rw-------. 1 boinc boinc      7764 Jan 14 06:09 heartbeat.json
[2026-01-14 06:10:04] -rw-r--r--. 1 boinc boinc      8192 Jan 14 06:09 boinc_mmap_file
[2026-01-14 06:10:04] -rw-r--r--. 1 boinc boinc        28 Jan 14 06:09 wrapper_checkpoint.txt
[2026-01-14 06:10:04] -rw-------. 1 boinc boinc      4884 Jan 14 06:09 pilotlog.txt
[2026-01-14 06:10:04] -rw-------. 1 boinc boinc   2391784 Jan 14 06:10 log.48188648._000160.job.log.1
[2026-01-14 06:10:04] -rw-------. 1 boinc boinc       357 Jan 14 06:10 output.list
[2026-01-14 06:10:04] -rw-r--r--. 1 boinc boinc       620 Jan 14 06:10 runtime_log
[2026-01-14 06:10:04] -rw-------. 1 boinc boinc   2949120 Jan 14 06:10 result.tar.gz
[2026-01-14 06:10:04] -rw-r--r--. 1 boinc boinc      8817 Jan 14 06:10 runtime_log.err
[2026-01-14 06:10:04] -rw-------. 1 boinc boinc       657 Jan 14 06:10 KKRKDmbAaz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjyhKDmOELmgn.diag
[2026-01-14 06:10:04] -rw-r--r--. 1 boinc boinc     20564 Jan 14 06:10 stderr.txt
[2026-01-14 06:10:04] HITS file was successfully produced:
[2026-01-14 06:10:04] -rw-------. 1 boinc boinc 250202179 Jan 14 06:06 shared/HITS.pool.root.1
[2026-01-14 06:10:04]  *** Contents of shared directory: ***
[2026-01-14 06:10:04] total 550320
[2026-01-14 06:10:04] -rw-r--r--. 2 boinc boinc 309761174 Jan 14 01:05 ATLAS.root_0
[2026-01-14 06:10:04] -rw-r--r--. 2 boinc boinc     15847 Jan 14 01:05 start_atlas.sh
[2026-01-14 06:10:04] -rw-r--r--. 2 boinc boinc    592409 Jan 14 01:05 input.tar.gz
[2026-01-14 06:10:04] -rw-------. 1 boinc boinc 250202179 Jan 14 06:06 HITS.pool.root.1
[2026-01-14 06:10:04] -rw-------. 1 boinc boinc   2949120 Jan 14 06:10 result.tar.gz
06:10:05 (6601): run_atlas exited; CPU time 65161.896933
06:10:05 (6601): called boinc_finish(0)

</stderr_txt>
]]>

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