Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:44:29 (1636109): wrapper (7.7.26015): starting
11:44:29 (1636109): wrapper: running run_atlas (--nthreads 9)
[2026-01-12 11:44:29] Arguments: --nthreads 9
[2026-01-12 11:44:29] Threads: 9
[2026-01-12 11:44:29] Checking for CVMFS
[2026-01-12 11:44:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 11:44:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 11:44:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 11:44:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 11:44:32] 2.13.3.0 11285 97941 166512 155059 2 131 27890271 32935937 21215 16776704 0 542876555 99.543 697394599 37255 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 11:44:32] CVMFS is ok
[2026-01-12 11:44:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 11:44:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 11:44:32] Further information can be found at the LHC@home message board.
[2026-01-12 11:44:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 11:44:32] Checking for apptainer binary...
[2026-01-12 11:44:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 11:44:32] Running /usr/bin/apptainer --version
[2026-01-12 11:44:32] apptainer version 1.4.5-2.el9
[2026-01-12 11:44:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 11:44:33] c7-3-29.aglt2.org
[2026-01-12 11:44:33] apptainer works
[2026-01-12 11:44:33] Set ATHENA_PROC_NUMBER=9
[2026-01-12 11:44:33] Set ATHENA_CORE_NUMBER=9
[2026-01-12 11:44:33] Starting ATLAS job with PandaID=6967236061
[2026-01-12 11:44:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 13:15:08]  *** The last 200 lines of the pilot log: ***
[2026-01-12 13:15:08]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6967236061/log.48188648._000148.job.log.tgz.1
[2026-01-12 13:15:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/84/log.48188648._000148.job.log.tgz.1
[2026-01-12 13:15:08]  workdir=None
[2026-01-12 13:15:08] ]
[2026-01-12 13:15:08] 2026-01-12 18:14:23,829 | INFO     | transferring file log.48188648._000148.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6967236061/log.48188648._000148.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-12 13:15:08] 2026-01-12 18:14:23,830 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6967236061/log.48188648._000148.job.log.tgz.1 /tmp/boinchome/slots/4/log.48188648._000148.job
[2026-01-12 13:15:08] 2026-01-12 18:14:23,889 | INFO     | adding to output.list: log.48188648._000148.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/84/log.48188648._000148.job.log.tg
[2026-01-12 13:15:08] 2026-01-12 18:14:23,890 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-12 13:15:08] 2026-01-12 18:14:23,890 | INFO     | summary of transferred files:
[2026-01-12 13:15:08] 2026-01-12 18:14:23,890 | INFO     |  -- lfn=log.48188648._000148.job.log.tgz.1, status_code=0, status=transferred
[2026-01-12 13:15:08] 2026-01-12 18:14:23,891 | INFO     | stage-out finished correctly
[2026-01-12 13:15:08] 2026-01-12 18:14:23,999 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-12 13:15:08] 2026-01-12 18:14:24,093 | INFO     | job 6967236061 has state=finished
[2026-01-12 13:15:08] 2026-01-12 18:14:24,093 | INFO     | preparing for final server update for job 6967236061 in state='finished'
[2026-01-12 13:15:08] 2026-01-12 18:14:24,153 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-12 13:15:08] 2026-01-12 18:14:24,153 | INFO     | this job has now completed (state=finished)
[2026-01-12 13:15:08] 2026-01-12 18:14:24,153 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-12 13:15:08] 2026-01-12 18:14:24,153 | INFO     | log transfer has been attempted: DONE
[2026-01-12 13:15:08] 2026-01-12 18:14:24,154 | INFO     | job 6967236061 has finished - writing final server update
[2026-01-12 13:15:08] 2026-01-12 18:14:24,154 | INFO     | total number of processed events: 400 (read)
[2026-01-12 13:15:08] 2026-01-12 18:14:24,154 | INFO     | executing command: lscpu
[2026-01-12 13:15:08] 2026-01-12 18:14:24,425 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-12 13:15:08] 2026-01-12 18:14:24,970 | INFO     | PID=1640357 has CPU usage=14.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-12 13:15:08] 2026-01-12 18:14:24,971 | INFO     | .. there are 19 such processes running
[2026-01-12 13:15:08] 2026-01-12 18:14:25,971 | INFO     | time since job start (5335s) is within the limit (349056.0s)
[2026-01-12 13:15:08] 2026-01-12 18:14:26,159 | INFO     | monitor loop #371: job 0:6967236061 is in state 'finished'
[2026-01-12 13:15:08] 2026-01-12 18:14:26,159 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 13:15:08] 2026-01-12 18:14:27,978 | INFO     | time since job start (5337s) is within the limit (349056.0s)
[2026-01-12 13:15:08] 2026-01-12 18:14:28,665 | INFO     | monitor loop #372: job 0:6967236061 is in state 'finished'
[2026-01-12 13:15:08] 2026-01-12 18:14:28,665 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 13:15:08] 2026-01-12 18:14:29,985 | INFO     | time since job start (5339s) is within the limit (349056.0s)
[2026-01-12 13:15:08] 2026-01-12 18:14:31,169 | INFO     | monitor loop #373: job 0:6967236061 is in state 'finished'
[2026-01-12 13:15:08] 2026-01-12 18:14:31,169 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 13:15:08] 2026-01-12 18:14:31,994 | INFO     | time since job start (5341s) is within the limit (349056.0s)
[2026-01-12 13:15:08] 2026-01-12 18:14:33,673 | INFO     | monitor loop #374: job 0:6967236061 is in state 'finished'
[2026-01-12 13:15:08] 2026-01-12 18:14:33,673 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 13:15:08] 2026-01-12 18:14:34,002 | INFO     | time since job start (5344s) is within the limit (349056.0s)
[2026-01-12 13:15:08] 2026-01-12 18:14:34,932 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 13:15:08] 2026-01-12 18:14:34,945 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3121.116833333334
[2026-01-12 13:15:08] 2026-01-12 18:14:34,976 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6967236061/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 13:15:08] 2026-01-12 18:14:34,977 | INFO     | extracted standard info from prmon json
[2026-01-12 13:15:08] 2026-01-12 18:14:34,977 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 13:15:08] 2026-01-12 18:14:34,977 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 13:15:08] 2026-01-12 18:14:34,977 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 13:15:08] 2026-01-12 18:14:34,977 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 13:15:08] 2026-01-12 18:14:34,979 | INFO     | fitting pss+swap vs Time
[2026-01-12 13:15:08] 2026-01-12 18:14:34,979 | INFO     | sum of square deviations: 158735603.98750016
[2026-01-12 13:15:08] 2026-01-12 18:14:34,979 | INFO     | sum of deviations: -11350885803.0875
[2026-01-12 13:15:08] 2026-01-12 18:14:34,980 | INFO     | mean x: 1768239111.5125
[2026-01-12 13:15:08] 2026-01-12 18:14:34,980 | INFO     | mean y: 2741018.5875
[2026-01-12 13:15:08] 2026-01-12 18:14:34,980 | INFO     | intersect: 126446208792.28125
[2026-01-12 13:15:08] 2026-01-12 18:14:34,980 | INFO     | chi2: 0.1496529335507468
[2026-01-12 13:15:08] 2026-01-12 18:14:34,980 | INFO     | current memory leak: -71.51 B/s (using 80 data points, chi2=0.15)
[2026-01-12 13:15:08] 2026-01-12 18:14:34,980 | INFO     | could have reported an average CPU frequency of 3169 MHz (6 samples)
[2026-01-12 13:15:08] 2026-01-12 18:14:34,981 | INFO     | ..............................
[2026-01-12 13:15:08] 2026-01-12 18:14:34,981 | INFO     | . Timing measurements:
[2026-01-12 13:15:08] 2026-01-12 18:14:34,981 | INFO     | . get job = 0 s
[2026-01-12 13:15:08] 2026-01-12 18:14:34,981 | INFO     | . initial setup = 6 s
[2026-01-12 13:15:08] 2026-01-12 18:14:34,981 | INFO     | . payload setup = 17 s
[2026-01-12 13:15:08] 2026-01-12 18:14:34,981 | INFO     | . stage-in = 0 s
[2026-01-12 13:15:08] 2026-01-12 18:14:34,981 | INFO     | . payload execution = 5270 s
[2026-01-12 13:15:08] 2026-01-12 18:14:34,981 | INFO     | . stage-out = 0 s
[2026-01-12 13:15:08] 2026-01-12 18:14:34,981 | INFO     | . log creation = 0 s
[2026-01-12 13:15:08] 2026-01-12 18:14:34,981 | INFO     | ..............................
[2026-01-12 13:15:08] 2026-01-12 18:14:35,378 | INFO     | 
[2026-01-12 13:15:08] 2026-01-12 18:14:35,378 | INFO     | job summary report
[2026-01-12 13:15:08] 2026-01-12 18:14:35,379 | INFO     | --------------------------------------------------
[2026-01-12 13:15:08] 2026-01-12 18:14:35,379 | INFO     | PanDA job id: 6967236061
[2026-01-12 13:15:08] 2026-01-12 18:14:35,379 | INFO     | task id: 48188648
[2026-01-12 13:15:08] 2026-01-12 18:14:35,379 | INFO     | errors: (none)
[2026-01-12 13:15:08] 2026-01-12 18:14:35,379 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 13:15:08] 2026-01-12 18:14:35,379 | INFO     | pilot state: finished 
[2026-01-12 13:15:08] 2026-01-12 18:14:35,379 | INFO     | transexitcode: 0
[2026-01-12 13:15:08] 2026-01-12 18:14:35,379 | INFO     | exeerrorcode: 0
[2026-01-12 13:15:08] 2026-01-12 18:14:35,379 | INFO     | exeerrordiag: 
[2026-01-12 13:15:08] 2026-01-12 18:14:35,379 | INFO     | exitcode: 0
[2026-01-12 13:15:08] 2026-01-12 18:14:35,379 | INFO     | exitmsg: OK
[2026-01-12 13:15:08] 2026-01-12 18:14:35,379 | INFO     | cpuconsumptiontime: 39646 s
[2026-01-12 13:15:08] 2026-01-12 18:14:35,379 | INFO     | nevents: 400
[2026-01-12 13:15:08] 2026-01-12 18:14:35,380 | INFO     | neventsw: 0
[2026-01-12 13:15:08] 2026-01-12 18:14:35,380 | INFO     | pid: 1647892
[2026-01-12 13:15:08] 2026-01-12 18:14:35,380 | INFO     | pgrp: 1647892
[2026-01-12 13:15:08] 2026-01-12 18:14:35,380 | INFO     | corecount: 9
[2026-01-12 13:15:08] 2026-01-12 18:14:35,380 | INFO     | event service: False
[2026-01-12 13:15:08] 2026-01-12 18:14:35,380 | INFO     | sizes: {0: 2283299, 1: 2283984, 2: 2284183, 13: 2284183, 24: 2284529, 5291: 2311078, 5292: 2311205, 5294: 2320315, 5305: 2320453}
[2026-01-12 13:15:08] 2026-01-12 18:14:35,380 | INFO     | --------------------------------------------------
[2026-01-12 13:15:08] 2026-01-12 18:14:35,380 | INFO     | 
[2026-01-12 13:15:08] 2026-01-12 18:14:35,380 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-12 13:15:08] 2026-01-12 18:14:35,406 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 13:15:08] 2026-01-12 18:14:35,406 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 13:15:08] 2026-01-12 18:14:35,406 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 13:15:08] 2026-01-12 18:14:35,406 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 13:15:08] 2026-01-12 18:14:35,406 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 13:15:08] 2026-01-12 18:14:35,407 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 13:15:08] 2026-01-12 18:14:35,407 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 13:15:08] 2026-01-12 18:14:35,407 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 13:15:08] 2026-01-12 18:14:35,407 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 13:15:08] 2026-01-12 18:14:35,407 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 13:15:08] 2026-01-12 18:14:35,407 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 13:15:08] 2026-01-12 18:14:35,407 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 13:15:08] 2026-01-12 18:14:35,407 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 13:15:08] 2026-01-12 18:14:35,407 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 13:15:08] 2026-01-12 18:14:35,407 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 13:15:08] 2026-01-12 18:14:35,407 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 13:15:08] 2026-01-12 18:14:35,407 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 13:15:08] 2026-01-12 18:14:35,407 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 13:15:08] 2026-01-12 18:14:35,407 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 13:15:08] 2026-01-12 18:14:35,407 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 13:15:08] 2026-01-12 18:14:35,408 | INFO     | job 6967236061 has completed (purged errors)
[2026-01-12 13:15:08] 2026-01-12 18:14:35,408 | INFO     | overall cleanup function is called
[2026-01-12 13:15:08] 2026-01-12 18:14:36,416 | INFO     | --- collectZombieJob: --- 10, [1647892]
[2026-01-12 13:15:08] 2026-01-12 18:14:36,416 | INFO     | zombie collector waiting for pid 1647892
[2026-01-12 13:15:08] 2026-01-12 18:14:36,416 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 13:15:08] 2026-01-12 18:14:36,417 | INFO     | collected zombie processes
[2026-01-12 13:15:08] 2026-01-12 18:14:36,417 | INFO     | will attempt to kill all subprocesses of pid=1647892
[2026-01-12 13:15:08] 2026-01-12 18:14:36,921 | INFO     | process IDs to be killed: [1647892] (in reverse order)
[2026-01-12 13:15:08] 2026-01-12 18:14:37,085 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 13:15:08] 2026-01-12 18:14:37,085 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 13:15:08] 2026-01-12 18:14:37,105 | INFO     | did not find any defunct processes belonging to 1647892
[2026-01-12 13:15:08] 2026-01-12 18:14:37,122 | INFO     | did not find any defunct processes belonging to 1647892
[2026-01-12 13:15:08] 2026-01-12 18:14:37,122 | INFO     | ready for new job
[2026-01-12 13:15:08] 2026-01-12 18:14:37,122 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 13:15:08] 2026-01-12 18:14:37,123 | INFO     | ***************************************
[2026-01-12 13:15:08] 2026-01-12 18:14:37,123 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 13:15:08] 2026-01-12 18:14:37,124 | INFO     | ***************************************
[2026-01-12 13:15:08] 2026-01-12 18:14:37,124 | INFO     | 
[2026-01-12 13:15:08] 2026-01-12 18:14:37,128 | INFO     | architecture information:
[2026-01-12 13:15:08] 2026-01-12 18:14:37,129 | INFO     | executing command: cat /etc/os-release
[2026-01-12 13:15:08] 2026-01-12 18:14:37,155 | INFO     | cat /etc/os-release:
[2026-01-12 13:15:08] NAME="CentOS Linux"
[2026-01-12 13:15:08] VERSION="7 (Core)"
[2026-01-12 13:15:08] ID="centos"
[2026-01-12 13:15:08] ID_LIKE="rhel fedora"
[2026-01-12 13:15:08] VERSION_ID="7"
[2026-01-12 13:15:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 13:15:08] ANSI_COLOR="0;31"
[2026-01-12 13:15:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 13:15:08] HOME_URL="https://www.centos.org/"
[2026-01-12 13:15:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 13:15:08] 
[2026-01-12 13:15:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 13:15:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 13:15:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 13:15:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 13:15:08] 
[2026-01-12 13:15:08] 2026-01-12 18:14:37,156 | INFO     | ***************************************
[2026-01-12 13:15:08] 2026-01-12 18:14:37,658 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-12 13:15:08] 2026-01-12 18:14:37,689 | INFO     | sufficient remaining disk space (70731694080 B)
[2026-01-12 13:15:08] 2026-01-12 18:14:37,689 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 13:15:08] 2026-01-12 18:14:37,689 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 13:15:08] 2026-01-12 18:14:37,689 | INFO     | update_server=False
[2026-01-12 13:15:08] 2026-01-12 18:14:37,689 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 13:15:08] 2026-01-12 18:14:37,689 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 13:15:08] 2026-01-12 18:14:37,691 | INFO     | aborting loop
[2026-01-12 13:15:08] 2026-01-12 18:14:37,690 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 13:15:08] 2026-01-12 18:14:38,086 | INFO     | all payload control threads have been joined
[2026-01-12 13:15:08] 2026-01-12 18:14:38,149 | INFO     | all job control threads have been joined
[2026-01-12 13:15:08] 2026-01-12 18:14:38,250 | INFO     | [monitor] cgroup control has ended
[2026-01-12 13:15:08] 2026-01-12 18:14:38,552 | INFO     | all data control threads have been joined
[2026-01-12 13:15:08] 2026-01-12 18:14:38,706 | INFO     | [job] retrieve thread has finished
[2026-01-12 13:15:08] 2026-01-12 18:14:38,714 | INFO     | [job] job monitor thread has finished
[2026-01-12 13:15:08] 2026-01-12 18:14:38,740 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 13:15:08] 2026-01-12 18:14:38,889 | INFO     | [payload] validate_post thread has finished
[2026-01-12 13:15:08] 2026-01-12 18:14:39,074 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 13:15:08] 2026-01-12 18:14:39,092 | INFO     | [payload] control thread has finished
[2026-01-12 13:15:08] 2026-01-12 18:14:39,141 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 13:15:08] 2026-01-12 18:14:39,154 | INFO     | [job] control thread has finished
[2026-01-12 13:15:08] 2026-01-12 18:14:39,558 | INFO     | [data] control thread has finished
[2026-01-12 13:15:08] 2026-01-12 18:14:39,577 | INFO     | [payload] failed_post thread has finished
[2026-01-12 13:15:08] 2026-01-12 18:14:39,699 | INFO     | [data] copytool_out thread has finished
[2026-01-12 13:15:08] 2026-01-12 18:14:39,981 | INFO     | [job] validate thread has finished
[2026-01-12 13:15:08] 2026-01-12 18:14:40,084 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 13:15:08] 2026-01-12 18:14:40,084 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 13:15:08] 2026-01-12 18:14:40,110 | INFO     | [data] copytool_in thread has finished
[2026-01-12 13:15:08] 2026-01-12 18:14:41,089 | INFO     | [job] queue monitor thread has finished
[2026-01-12 13:15:08] 2026-01-12 18:14:43,150 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 13:15:08] 2026-01-12 18:14:48,061 | INFO     | job.realtimelogging is not enabled
[2026-01-12 13:15:08] 2026-01-12 18:14:49,067 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 13:15:08] 2026-01-12 18:14:49,686 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140572897646400)>', '<ExcThread(monitor, started 140572123719424)>']
[2026-01-12 13:15:08] 2026-01-12 18:14:54,712 | INFO     | all workflow threads have been joined
[2026-01-12 13:15:08] 2026-01-12 18:14:54,712 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 13:15:08] 2026-01-12 18:14:54,713 | INFO     | traces error code: 0
[2026-01-12 13:15:08] 2026-01-12 18:14:54,713 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 13:15:08] 2026-01-12 18:15:07,738 | INFO     | PID=1640357 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 13:15:08] 2026-01-12 18:15:07,739 | INFO     | .. there are 20 such processes running
[2026-01-12 13:15:08] 2026-01-12 18:15:07,740 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 13:15:08] 2026-01-12 18:15:07,740 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 13:15:08] 2026-01-12 18:15:07,740 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 13:15:08] 2026-01-12 18:15:07,740 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 13:15:08] 2026-01-12 18:15:07,740 | INFO     | [monitor] control thread has ended
[2026-01-12 13:15:08] 2026-01-12 18:15:07,844 [wrapper] ==== pilot stdout END ====
[2026-01-12 13:15:08] 2026-01-12 18:15:07,847 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 13:15:08] 2026-01-12 18:15:07,849 [wrapper] pilotpid: 1640357
[2026-01-12 13:15:08] 2026-01-12 18:15:07,851 [wrapper] Pilot exit status: 0
[2026-01-12 13:15:08] 2026-01-12 18:15:07,867 [wrapper] pandaids: 6967236061
[2026-01-12 13:15:08] 2026-01-12 18:15:08,032 [wrapper] cleanup supervisor_pilot 2216501 1640358
[2026-01-12 13:15:08] 2026-01-12 18:15:08,055 [wrapper] Test setup, not cleaning
[2026-01-12 13:15:08] 2026-01-12 18:15:08,074 [wrapper] apfmon messages muted
[2026-01-12 13:15:08] 2026-01-12 18:15:08,098 [wrapper] ==== wrapper stdout END ====
[2026-01-12 13:15:08] 2026-01-12 18:15:08,113 [wrapper] ==== wrapper stderr END ====
[2026-01-12 13:15:08]  *** Error codes and diagnostics ***
[2026-01-12 13:15:08]     "exeErrorCode": 0,
[2026-01-12 13:15:08]     "exeErrorDiag": "",
[2026-01-12 13:15:08]     "pilotErrorCode": 0,
[2026-01-12 13:15:08]     "pilotErrorDiag": "",
[2026-01-12 13:15:08]  *** Listing of results directory ***
[2026-01-12 13:15:08] total 552376
[2026-01-12 13:15:08] -rw-r--r--. 1 boincer umatlas    579449 Jan 12 11:03 pilot3.tar.gz
[2026-01-12 13:15:08] -rw-r--r--. 1 boincer umatlas      5112 Jan 12 11:38 queuedata.json
[2026-01-12 13:15:08] -rwx------. 1 boincer umatlas     36322 Jan 12 11:42 runpilot2-wrapper.sh
[2026-01-12 13:15:08] -rw-r--r--. 1 boincer umatlas       100 Jan 12 11:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 13:15:08] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 12 11:44 run_atlas
[2026-01-12 13:15:08] -rw-r--r--. 1 boincer umatlas       105 Jan 12 11:44 job.xml
[2026-01-12 13:15:08] -rw-r--r--. 2 boincer umatlas 312640527 Jan 12 11:44 EVNT.48188646._000004.pool.root.1
[2026-01-12 13:15:08] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 11:44 start_atlas.sh
[2026-01-12 13:15:08] drwxrwx--x. 2 boincer umatlas      4096 Jan 12 11:44 shared
[2026-01-12 13:15:08] -rw-r--r--. 2 boincer umatlas    592412 Jan 12 11:44 input.tar.gz
[2026-01-12 13:15:08] -rw-r--r--. 1 boincer umatlas         0 Jan 12 11:44 boinc_lockfile
[2026-01-12 13:15:08] -rw-r--r--. 1 boincer umatlas      2633 Jan 12 11:44 pandaJob.out
[2026-01-12 13:15:08] -rw-------. 1 boincer umatlas        57 Jan 12 11:44 setup.sh.local
[2026-01-12 13:15:08] -rw-------. 1 boincer umatlas    988542 Jan 12 11:45 agis_schedconf.cvmfs.json
[2026-01-12 13:15:08] -rw-------. 1 boincer umatlas   1516240 Jan 12 11:45 agis_ddmendpoints.agis.ALL.json
[2026-01-12 13:15:08] drwx------. 5 boincer umatlas      4096 Jan 12 11:45 pilot3
[2026-01-12 13:15:08] -rw-r--r--. 1 boincer umatlas      6945 Jan 12 13:11 init_data.xml
[2026-01-12 13:15:08] -rw-------. 1 boincer umatlas 246757489 Jan 12 13:13 HITS.48188648._000148.pool.root.1
[2026-01-12 13:15:08] -rw-r--r--. 1 boincer umatlas       529 Jan 12 13:13 boinc_task_state.xml
[2026-01-12 13:15:08] -rw-------. 1 boincer umatlas      1034 Jan 12 13:14 memory_monitor_summary.json
[2026-01-12 13:15:08] -rw-------. 1 boincer umatlas    397778 Jan 12 13:14 log.48188648._000148.job.log.tgz.1
[2026-01-12 13:15:08] -rw-------. 1 boincer umatlas      7773 Jan 12 13:14 heartbeat.json
[2026-01-12 13:15:08] -rw-r--r--. 1 boincer umatlas      8192 Jan 12 13:15 boinc_mmap_file
[2026-01-12 13:15:08] -rw-r--r--. 1 boincer umatlas        27 Jan 12 13:15 wrapper_checkpoint.txt
[2026-01-12 13:15:08] -rw-------. 1 boincer umatlas        95 Jan 12 13:15 pilot_heartbeat.json
[2026-01-12 13:15:08] -rw-------. 1 boincer umatlas       823 Jan 12 13:15 pilotlog.txt
[2026-01-12 13:15:08] -rw-------. 1 boincer umatlas    757926 Jan 12 13:15 log.48188648._000148.job.log.1
[2026-01-12 13:15:08] -rw-------. 1 boincer umatlas       357 Jan 12 13:15 output.list
[2026-01-12 13:15:08] -rw-r--r--. 1 boincer umatlas       620 Jan 12 13:15 runtime_log
[2026-01-12 13:15:08] -rw-------. 1 boincer umatlas   1177600 Jan 12 13:15 result.tar.gz
[2026-01-12 13:15:08] -rw-r--r--. 1 boincer umatlas      9337 Jan 12 13:15 runtime_log.err
[2026-01-12 13:15:08] -rw-------. 1 boincer umatlas       651 Jan 12 13:15 OCKODmaAaz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXyhKDmbjV0Eo.diag
[2026-01-12 13:15:08] -rw-r--r--. 1 boincer umatlas     22425 Jan 12 13:15 stderr.txt
[2026-01-12 13:15:08] HITS file was successfully produced:
[2026-01-12 13:15:08] -rw-------. 1 boincer umatlas 246757489 Jan 12 13:13 shared/HITS.pool.root.1
[2026-01-12 13:15:08]  *** Contents of shared directory: ***
[2026-01-12 13:15:08] total 548048
[2026-01-12 13:15:08] -rw-r--r--. 2 boincer umatlas 312640527 Jan 12 11:44 ATLAS.root_0
[2026-01-12 13:15:08] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 11:44 start_atlas.sh
[2026-01-12 13:15:08] -rw-r--r--. 2 boincer umatlas    592412 Jan 12 11:44 input.tar.gz
[2026-01-12 13:15:08] -rw-------. 1 boincer umatlas 246757489 Jan 12 13:13 HITS.pool.root.1
[2026-01-12 13:15:08] -rw-------. 1 boincer umatlas   1177600 Jan 12 13:15 result.tar.gz
13:15:09 (1636109): run_atlas exited; CPU time 39869.924031
13:15:09 (1636109): called boinc_finish(0)

</stderr_txt>
]]>

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