Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:06:15 (8718): wrapper (7.7.26015): starting
23:06:15 (8718): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 23:06:15] Arguments: --nthreads 8
[2026-01-12 23:06:15] Threads: 8
[2026-01-12 23:06:15] Checking for CVMFS
[2026-01-12 23:06:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 23:06:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 23:06:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 23:06:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 23:06:17] 2.11.2.0 5643 40295 100820 155066 1 61 20319569 25165824 96 130560 0 9265554 99.762 8682429 2955 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-12 23:06:17] CVMFS is ok
[2026-01-12 23:06:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 23:06:17] Checking for apptainer binary...
[2026-01-12 23:06:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 23:06:17] Running /usr/bin/apptainer --version
[2026-01-12 23:06:18] apptainer version 1.3.2-1.el7
[2026-01-12 23:06:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 23:06:50] cg-vwn380.simple-grid.lan
[2026-01-12 23:06:50] apptainer works
[2026-01-12 23:06:50] Set ATHENA_PROC_NUMBER=8
[2026-01-12 23:06:50] Set ATHENA_CORE_NUMBER=8
[2026-01-12 23:06:50] Starting ATLAS job with PandaID=6967236039
[2026-01-12 23:06:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 04:36:01]  *** The last 200 lines of the pilot log: ***
[2026-01-13 04:36:01] 2026-01-13 03:35:01,901 | INFO     | time since job start (19425s) is within the limit (349056.0s)
[2026-01-13 04:36:01] 2026-01-13 03:35:02,490 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 04:36:01] 2026-01-13 03:35:02,491 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-13 04:36:01] 2026-01-13 03:35:02,493 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6967236039/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 04:36:01] 2026-01-13 03:35:02,493 | INFO     | extracted standard info from prmon json
[2026-01-13 04:36:01] 2026-01-13 03:35:02,494 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 04:36:01] 2026-01-13 03:35:02,494 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 04:36:01] 2026-01-13 03:35:02,494 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 04:36:01] 2026-01-13 03:35:02,494 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 04:36:01] 2026-01-13 03:35:02,506 | INFO     | fitting pss+swap vs Time
[2026-01-13 04:36:01] 2026-01-13 03:35:02,506 | INFO     | sum of square deviations: 9059954057.0
[2026-01-13 04:36:01] 2026-01-13 03:35:02,510 | INFO     | sum of deviations: 114373872902.99998
[2026-01-13 04:36:01] 2026-01-13 03:35:02,510 | INFO     | mean x: 1768265788.5
[2026-01-13 04:36:01] 2026-01-13 03:35:02,510 | INFO     | mean y: 2506663.6298701297
[2026-01-13 04:36:01] 2026-01-13 03:35:02,510 | INFO     | intersect: -22320278339.49744
[2026-01-13 04:36:01] 2026-01-13 03:35:02,511 | INFO     | chi2: 7.920351253510892
[2026-01-13 04:36:01] 2026-01-13 03:35:02,511 | INFO     | sum of square deviations: 8625843592.0
[2026-01-13 04:36:01] 2026-01-13 03:35:02,514 | INFO     | sum of deviations: 132667493095.99995
[2026-01-13 04:36:01] 2026-01-13 03:35:02,514 | INFO     | mean x: 1768265636.0
[2026-01-13 04:36:01] 2026-01-13 03:35:02,515 | INFO     | mean y: 2512994.1749174916
[2026-01-13 04:36:01] 2026-01-13 03:35:02,515 | INFO     | intersect: -27193826303.409225
[2026-01-13 04:36:01] 2026-01-13 03:35:02,523 | INFO     | chi2: 7.211813175035882
[2026-01-13 04:36:01] 2026-01-13 03:35:02,524 | INFO     | current chi2=7.211813175035882 (change=8.94579111199056 %)
[2026-01-13 04:36:01] 2026-01-13 03:35:02,524 | INFO     | right removable region: 302
[2026-01-13 04:36:01] 2026-01-13 03:35:02,524 | INFO     | sum of square deviations: 8625843592.0
[2026-01-13 04:36:01] 2026-01-13 03:35:02,528 | INFO     | sum of deviations: 5703825739.999996
[2026-01-13 04:36:01] 2026-01-13 03:35:02,528 | INFO     | mean x: 1768265941.0
[2026-01-13 04:36:01] 2026-01-13 03:35:02,528 | INFO     | mean y: 2544814.5148514854
[2026-01-13 04:36:01] 2026-01-13 03:35:02,528 | INFO     | intersect: -1166718305.3028111
[2026-01-13 04:36:01] 2026-01-13 03:35:02,528 | INFO     | chi2: 3.1622265063135444
[2026-01-13 04:36:01] 2026-01-13 03:35:02,529 | INFO     | current chi2=3.1622265063135444 (change=60.07466834363174 %)
[2026-01-13 04:36:01] 2026-01-13 03:35:02,529 | INFO     | sum of square deviations: 8205826414.5
[2026-01-13 04:36:01] 2026-01-13 03:35:02,532 | INFO     | sum of deviations: -65373454780.000015
[2026-01-13 04:36:01] 2026-01-13 03:35:02,532 | INFO     | mean x: 1768266093.5
[2026-01-13 04:36:01] 2026-01-13 03:35:02,532 | INFO     | mean y: 2570551.5302013424
[2026-01-13 04:36:01] 2026-01-13 03:35:02,533 | INFO     | intersect: 14089837045.26984
[2026-01-13 04:36:01] 2026-01-13 03:35:02,533 | INFO     | chi2: 1.0373924501897764
[2026-01-13 04:36:01] 2026-01-13 03:35:02,533 | INFO     | current chi2=1.0373924501897764 (change=67.19423962456294 %)
[2026-01-13 04:36:01] 2026-01-13 03:35:02,534 | INFO     | sum of square deviations: 7799669962.0
[2026-01-13 04:36:01] 2026-01-13 03:35:02,537 | INFO     | sum of deviations: -71418073490.0
[2026-01-13 04:36:01] 2026-01-13 03:35:02,537 | INFO     | mean x: 1768266246.0
[2026-01-13 04:36:01] 2026-01-13 03:35:02,537 | INFO     | mean y: 2572786.361774744
[2026-01-13 04:36:01] 2026-01-13 03:35:02,537 | INFO     | intersect: 16193792327.955297
[2026-01-13 04:36:01] 2026-01-13 03:35:02,538 | INFO     | chi2: 0.9751572112179165
[2026-01-13 04:36:01] 2026-01-13 03:35:02,538 | INFO     | current chi2=0.9751572112179165 (change=5.999199142086954 %)
[2026-01-13 04:36:01] 2026-01-13 03:35:02,538 | INFO     | left removable region: 30
[2026-01-13 04:36:01] 2026-01-13 03:35:02,538 | INFO     | sum of square deviations: 6239923508.0
[2026-01-13 04:36:01] 2026-01-13 03:35:02,541 | INFO     | sum of deviations: -26092110567.500004
[2026-01-13 04:36:01] 2026-01-13 03:35:02,541 | INFO     | mean x: 1768266520.5
[2026-01-13 04:36:01] 2026-01-13 03:35:02,541 | INFO     | mean y: 2570175.930147059
[2026-01-13 04:36:01] 2026-01-13 03:35:02,541 | INFO     | intersect: 7396539910.742241
[2026-01-13 04:36:01] 2026-01-13 03:35:02,542 | INFO     | chi2: 0.14761423601688076
[2026-01-13 04:36:01] 2026-01-13 03:35:02,542 | INFO     | current memory leak: -4.18 B/s (using 272 data points, chi2=0.15)
[2026-01-13 04:36:01] 2026-01-13 03:35:02,543 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-01-13 04:36:01] 2026-01-13 03:35:02,543 | INFO     | ..............................
[2026-01-13 04:36:01] 2026-01-13 03:35:02,543 | INFO     | . Timing measurements:
[2026-01-13 04:36:01] 2026-01-13 03:35:02,543 | INFO     | . get job = 0 s
[2026-01-13 04:36:01] 2026-01-13 03:35:02,543 | INFO     | . initial setup = 11 s
[2026-01-13 04:36:01] 2026-01-13 03:35:02,543 | INFO     | . payload setup = 154 s
[2026-01-13 04:36:01] 2026-01-13 03:35:02,544 | INFO     | . stage-in = 0 s
[2026-01-13 04:36:01] 2026-01-13 03:35:02,544 | INFO     | . payload execution = 18928 s
[2026-01-13 04:36:01] 2026-01-13 03:35:02,544 | INFO     | . stage-out = 3 s
[2026-01-13 04:36:01] 2026-01-13 03:35:02,544 | INFO     | . log creation = 1 s
[2026-01-13 04:36:01] 2026-01-13 03:35:02,544 | INFO     | ..............................
[2026-01-13 04:36:01] 2026-01-13 03:35:02,918 | INFO     | 
[2026-01-13 04:36:01] 2026-01-13 03:35:02,918 | INFO     | job summary report
[2026-01-13 04:36:01] 2026-01-13 03:35:02,918 | INFO     | --------------------------------------------------
[2026-01-13 04:36:01] 2026-01-13 03:35:02,919 | INFO     | PanDA job id: 6967236039
[2026-01-13 04:36:01] 2026-01-13 03:35:02,919 | INFO     | task id: 48188648
[2026-01-13 04:36:01] 2026-01-13 03:35:02,919 | INFO     | errors: (none)
[2026-01-13 04:36:01] 2026-01-13 03:35:02,919 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 04:36:01] 2026-01-13 03:35:02,919 | INFO     | pilot state: finished 
[2026-01-13 04:36:01] 2026-01-13 03:35:02,919 | INFO     | transexitcode: 0
[2026-01-13 04:36:01] 2026-01-13 03:35:02,919 | INFO     | exeerrorcode: 0
[2026-01-13 04:36:01] 2026-01-13 03:35:02,919 | INFO     | exeerrordiag: 
[2026-01-13 04:36:01] 2026-01-13 03:35:02,920 | INFO     | exitcode: 0
[2026-01-13 04:36:01] 2026-01-13 03:35:02,920 | INFO     | exitmsg: OK
[2026-01-13 04:36:01] 2026-01-13 03:35:02,920 | INFO     | cpuconsumptiontime: 70962 s
[2026-01-13 04:36:01] 2026-01-13 03:35:02,920 | INFO     | nevents: 400
[2026-01-13 04:36:01] 2026-01-13 03:35:02,920 | INFO     | neventsw: 0
[2026-01-13 04:36:01] 2026-01-13 03:35:02,920 | INFO     | pid: 18911
[2026-01-13 04:36:01] 2026-01-13 03:35:02,920 | INFO     | pgrp: 18911
[2026-01-13 04:36:01] 2026-01-13 03:35:02,920 | INFO     | corecount: 8
[2026-01-13 04:36:01] 2026-01-13 03:35:02,920 | INFO     | event service: False
[2026-01-13 04:36:01] 2026-01-13 03:35:02,921 | INFO     | sizes: {0: 2283293, 1: 2284149, 2: 2284177, 12: 2284177, 23: 2284205, 34: 2284233, 45: 2284389, 55: 2284417, 66: 2284445, 77: 2284473, 87: 2284529, 98: 2284837, 10
[2026-01-13 04:36:01] 2026-01-13 03:35:02,921 | INFO     | --------------------------------------------------
[2026-01-13 04:36:01] 2026-01-13 03:35:02,921 | INFO     | 
[2026-01-13 04:36:01] 2026-01-13 03:35:02,921 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-13 04:36:01] 2026-01-13 03:35:03,534 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 04:36:01] 2026-01-13 03:35:03,535 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 04:36:01] 2026-01-13 03:35:03,535 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 04:36:01] 2026-01-13 03:35:03,535 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 04:36:01] 2026-01-13 03:35:03,535 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 04:36:01] 2026-01-13 03:35:03,535 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 04:36:01] 2026-01-13 03:35:03,535 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 04:36:01] 2026-01-13 03:35:03,536 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 04:36:01] 2026-01-13 03:35:03,536 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 04:36:01] 2026-01-13 03:35:03,536 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 04:36:01] 2026-01-13 03:35:03,536 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 04:36:01] 2026-01-13 03:35:03,536 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 04:36:01] 2026-01-13 03:35:03,536 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 04:36:01] 2026-01-13 03:35:03,536 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 04:36:01] 2026-01-13 03:35:03,536 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 04:36:01] 2026-01-13 03:35:03,537 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 04:36:01] 2026-01-13 03:35:03,537 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 04:36:01] 2026-01-13 03:35:03,537 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 04:36:01] 2026-01-13 03:35:03,537 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 04:36:01] 2026-01-13 03:35:03,537 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 04:36:01] 2026-01-13 03:35:03,537 | INFO     | job 6967236039 has completed (purged errors)
[2026-01-13 04:36:01] 2026-01-13 03:35:03,537 | INFO     | overall cleanup function is called
[2026-01-13 04:36:01] 2026-01-13 03:35:04,546 | INFO     | --- collectZombieJob: --- 10, [18911]
[2026-01-13 04:36:01] 2026-01-13 03:35:04,546 | INFO     | zombie collector waiting for pid 18911
[2026-01-13 04:36:01] 2026-01-13 03:35:04,546 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 04:36:01] 2026-01-13 03:35:04,547 | INFO     | collected zombie processes
[2026-01-13 04:36:01] 2026-01-13 03:35:04,547 | INFO     | will attempt to kill all subprocesses of pid=18911
[2026-01-13 04:36:01] 2026-01-13 03:35:04,654 | INFO     | process IDs to be killed: [18911] (in reverse order)
[2026-01-13 04:36:01] 2026-01-13 03:35:06,792 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 04:36:01] 2026-01-13 03:35:06,792 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 04:36:01] 2026-01-13 03:35:06,794 | INFO     | did not find any defunct processes belonging to 18911
[2026-01-13 04:36:01] 2026-01-13 03:35:06,796 | INFO     | did not find any defunct processes belonging to 18911
[2026-01-13 04:36:01] 2026-01-13 03:35:06,796 | INFO     | ready for new job
[2026-01-13 04:36:01] 2026-01-13 03:35:06,796 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 04:36:01] 2026-01-13 03:35:06,799 | INFO     | ***************************************
[2026-01-13 04:36:01] 2026-01-13 03:35:06,799 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 04:36:01] 2026-01-13 03:35:06,799 | INFO     | ***************************************
[2026-01-13 04:36:01] 2026-01-13 03:35:06,799 | INFO     | 
[2026-01-13 04:36:01] 2026-01-13 03:35:06,800 | INFO     | pilot is running in a VM
[2026-01-13 04:36:01] 2026-01-13 03:35:06,800 | INFO     | architecture information:
[2026-01-13 04:36:01] 2026-01-13 03:35:06,820 | INFO     | executing command: cat /etc/os-release
[2026-01-13 04:36:01] 2026-01-13 03:35:07,123 | INFO     | cat /etc/os-release:
[2026-01-13 04:36:01] NAME="CentOS Linux"
[2026-01-13 04:36:01] VERSION="7 (Core)"
[2026-01-13 04:36:01] ID="centos"
[2026-01-13 04:36:01] ID_LIKE="rhel fedora"
[2026-01-13 04:36:01] VERSION_ID="7"
[2026-01-13 04:36:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 04:36:01] ANSI_COLOR="0;31"
[2026-01-13 04:36:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 04:36:01] HOME_URL="https://www.centos.org/"
[2026-01-13 04:36:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 04:36:01] 
[2026-01-13 04:36:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 04:36:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 04:36:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 04:36:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 04:36:01] 
[2026-01-13 04:36:01] 2026-01-13 03:35:07,123 | INFO     | ***************************************
[2026-01-13 04:36:01] 2026-01-13 03:35:07,626 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-13 04:36:01] 2026-01-13 03:35:07,861 | INFO     | sufficient remaining disk space (496404267008 B)
[2026-01-13 04:36:01] 2026-01-13 03:35:07,861 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 04:36:01] 2026-01-13 03:35:07,861 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 04:36:01] 2026-01-13 03:35:07,861 | INFO     | update_server=False
[2026-01-13 04:36:01] 2026-01-13 03:35:07,862 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 04:36:01] 2026-01-13 03:35:07,862 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 04:36:01] 2026-01-13 03:35:07,866 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 04:36:01] 2026-01-13 03:35:07,866 | INFO     | aborting loop
[2026-01-13 04:36:01] 2026-01-13 03:35:07,974 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 04:36:01] 2026-01-13 03:35:08,540 | INFO     | all data control threads have been joined
[2026-01-13 04:36:01] 2026-01-13 03:35:08,867 | INFO     | [job] retrieve thread has finished
[2026-01-13 04:36:01] 2026-01-13 03:35:08,868 | INFO     | [job] queue monitor thread has finished
[2026-01-13 04:36:01] 2026-01-13 03:35:08,872 | INFO     | [job] job monitor thread has finished
[2026-01-13 04:36:01] 2026-01-13 03:35:08,948 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 04:36:01] 2026-01-13 03:35:08,997 | INFO     | all payload control threads have been joined
[2026-01-13 04:36:01] 2026-01-13 03:35:09,249 | INFO     | all job control threads have been joined
[2026-01-13 04:36:01] 2026-01-13 03:35:09,366 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 04:36:01] 2026-01-13 03:35:09,546 | INFO     | [data] control thread has finished
[2026-01-13 04:36:01] 2026-01-13 03:35:09,903 | INFO     | [data] copytool_in thread has finished
[2026-01-13 04:36:01] 2026-01-13 03:35:09,920 | INFO     | [payload] validate_post thread has finished
[2026-01-13 04:36:01] 2026-01-13 03:35:09,981 | INFO     | [data] copytool_out thread has finished
[2026-01-13 04:36:01] 2026-01-13 03:35:09,999 | INFO     | [payload] failed_post thread has finished
[2026-01-13 04:36:01] 2026-01-13 03:35:10,003 | INFO     | [payload] control thread has finished
[2026-01-13 04:36:01] 2026-01-13 03:35:10,031 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 04:36:01] 2026-01-13 03:35:10,255 | INFO     | [job] control thread has finished
[2026-01-13 04:36:01] 2026-01-13 03:35:10,260 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 04:36:01] 2026-01-13 03:35:10,317 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 04:36:01] 2026-01-13 03:35:10,369 | INFO     | [job] validate thread has finished
[2026-01-13 04:36:01] 2026-01-13 03:35:14,040 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 04:36:01] 2026-01-13 03:35:35,054 | INFO     | PID=12440 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-13 04:36:01] 2026-01-13 03:35:35,054 | INFO     | .. there are 2 such processes running
[2026-01-13 04:36:01] 2026-01-13 03:35:35,055 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 04:36:01] 2026-01-13 03:35:35,055 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 04:36:01] 2026-01-13 03:35:35,055 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 04:36:01] 2026-01-13 03:35:49,126 | INFO     | [monitor] cgroup control has ended
[2026-01-13 04:36:01] 2026-01-13 03:35:50,912 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140190560352064)>', '<ExcThread(monitor, started 140190098102016)>']
[2026-01-13 04:36:01] 2026-01-13 03:35:51,140 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 04:36:01] 2026-01-13 03:35:51,140 | INFO     | [monitor] control thread has ended
[2026-01-13 04:36:01] 2026-01-13 03:35:55,938 | INFO     | all workflow threads have been joined
[2026-01-13 04:36:01] 2026-01-13 03:35:55,938 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 04:36:01] 2026-01-13 03:35:55,939 | INFO     | traces error code: 0
[2026-01-13 04:36:01] 2026-01-13 03:35:55,939 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 04:36:01] 2026-01-13 03:35:56,382 [wrapper] ==== pilot stdout END ====
[2026-01-13 04:36:01] 2026-01-13 03:35:56,476 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 04:36:01] 2026-01-13 03:35:56,571 [wrapper] pilotpid: 12440
[2026-01-13 04:36:01] 2026-01-13 03:35:56,637 [wrapper] Pilot exit status: 0
[2026-01-13 04:36:01] 2026-01-13 03:35:57,105 [wrapper] pandaids: 6967236039
[2026-01-13 04:36:01] 2026-01-13 03:35:57,883 [wrapper] cleanup supervisor_pilot 15690 12441
[2026-01-13 04:36:01] 2026-01-13 03:35:58,005 [wrapper] Test setup, not cleaning
[2026-01-13 04:36:01] 2026-01-13 03:35:58,130 [wrapper] apfmon messages muted
[2026-01-13 04:36:01] 2026-01-13 03:35:58,252 [wrapper] ==== wrapper stdout END ====
[2026-01-13 04:36:01] 2026-01-13 03:35:58,351 [wrapper] ==== wrapper stderr END ====
[2026-01-13 04:36:01]  *** Error codes and diagnostics ***
[2026-01-13 04:36:01]     "exeErrorCode": 0,
[2026-01-13 04:36:01]     "exeErrorDiag": "",
[2026-01-13 04:36:01]     "pilotErrorCode": 0,
[2026-01-13 04:36:01]     "pilotErrorDiag": "",
[2026-01-13 04:36:01]  *** Listing of results directory ***
[2026-01-13 04:36:01] total 559324
[2026-01-13 04:36:01] -rw-r--r--. 1 boinc boinc    579449 Jan 12 17:03 pilot3.tar.gz
[2026-01-13 04:36:01] -rw-r--r--. 1 boinc boinc      5112 Jan 12 17:38 queuedata.json
[2026-01-13 04:36:01] -rwx------. 1 boinc boinc     36322 Jan 12 17:41 runpilot2-wrapper.sh
[2026-01-13 04:36:01] -rw-r--r--. 1 boinc boinc       100 Jan 12 23:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 04:36:01] -rwxr-xr-x. 1 boinc boinc      7986 Jan 12 23:06 run_atlas
[2026-01-13 04:36:01] -rw-r--r--. 1 boinc boinc       105 Jan 12 23:06 job.xml
[2026-01-13 04:36:01] -rw-r--r--. 1 boinc boinc      6391 Jan 12 23:06 init_data.xml
[2026-01-13 04:36:01] -rw-r--r--. 2 boinc boinc 312640527 Jan 12 23:06 EVNT.48188646._000004.pool.root.1
[2026-01-13 04:36:01] -rw-r--r--. 2 boinc boinc     15847 Jan 12 23:06 start_atlas.sh
[2026-01-13 04:36:01] drwxrwx--x. 2 boinc boinc        68 Jan 12 23:06 shared
[2026-01-13 04:36:01] -rw-r--r--. 2 boinc boinc    592409 Jan 12 23:06 input.tar.gz
[2026-01-13 04:36:01] -rw-r--r--. 1 boinc boinc         0 Jan 12 23:06 boinc_lockfile
[2026-01-13 04:36:01] -rw-r--r--. 1 boinc boinc      2630 Jan 12 23:06 pandaJob.out
[2026-01-13 04:36:01] -rw-------. 1 boinc boinc    988547 Jan 12 23:11 agis_schedconf.cvmfs.json
[2026-01-13 04:36:01] drwx------. 5 boinc boinc      4096 Jan 12 23:11 pilot3
[2026-01-13 04:36:01] -rw-------. 1 boinc boinc 249952683 Jan 13 04:31 HITS.48188648._000126.pool.root.1
[2026-01-13 04:36:01] -rw-r--r--. 1 boinc boinc       531 Jan 13 04:31 boinc_task_state.xml
[2026-01-13 04:36:01] -rw-------. 1 boinc boinc      1013 Jan 13 04:32 memory_monitor_summary.json
[2026-01-13 04:36:01] -rw-------. 1 boinc boinc   1516240 Jan 13 04:32 agis_ddmendpoints.agis.ALL.json
[2026-01-13 04:36:01] -rw-------. 1 boinc boinc    540809 Jan 13 04:33 log.48188648._000126.job.log.tgz.1
[2026-01-13 04:36:01] -rw-------. 1 boinc boinc        95 Jan 13 04:34 pilot_heartbeat.json
[2026-01-13 04:36:01] -rw-------. 1 boinc boinc      7767 Jan 13 04:35 heartbeat.json
[2026-01-13 04:36:01] -rw-r--r--. 1 boinc boinc      8192 Jan 13 04:35 boinc_mmap_file
[2026-01-13 04:36:01] -rw-r--r--. 1 boinc boinc        28 Jan 13 04:35 wrapper_checkpoint.txt
[2026-01-13 04:36:01] -rw-------. 1 boinc boinc      4884 Jan 13 04:35 pilotlog.txt
[2026-01-13 04:36:01] -rw-------. 1 boinc boinc   2582346 Jan 13 04:35 log.48188648._000126.job.log.1
[2026-01-13 04:36:01] -rw-------. 1 boinc boinc       357 Jan 13 04:36 output.list
[2026-01-13 04:36:01] -rw-r--r--. 1 boinc boinc       620 Jan 13 04:36 runtime_log
[2026-01-13 04:36:01] -rw-------. 1 boinc boinc   3143680 Jan 13 04:36 result.tar.gz
[2026-01-13 04:36:01] -rw-------. 1 boinc boinc       657 Jan 13 04:36 XxALDmc9Zz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3inKDmXF7Sln.diag
[2026-01-13 04:36:01] -rw-r--r--. 1 boinc boinc      8817 Jan 13 04:36 runtime_log.err
[2026-01-13 04:36:01] -rw-r--r--. 1 boinc boinc     20775 Jan 13 04:36 stderr.txt
[2026-01-13 04:36:01] HITS file was successfully produced:
[2026-01-13 04:36:01] -rw-------. 1 boinc boinc 249952683 Jan 13 04:31 shared/HITS.pool.root.1
[2026-01-13 04:36:01]  *** Contents of shared directory: ***
[2026-01-13 04:36:01] total 553080
[2026-01-13 04:36:01] -rw-r--r--. 2 boinc boinc 312640527 Jan 12 23:06 ATLAS.root_0
[2026-01-13 04:36:01] -rw-r--r--. 2 boinc boinc     15847 Jan 12 23:06 start_atlas.sh
[2026-01-13 04:36:01] -rw-r--r--. 2 boinc boinc    592409 Jan 12 23:06 input.tar.gz
[2026-01-13 04:36:01] -rw-------. 1 boinc boinc 249952683 Jan 13 04:31 HITS.pool.root.1
[2026-01-13 04:36:01] -rw-------. 1 boinc boinc   3143680 Jan 13 04:36 result.tar.gz
04:36:03 (8718): run_atlas exited; CPU time 71160.776451
04:36:03 (8718): called boinc_finish(0)

</stderr_txt>
]]>

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